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|
name: Release
on:
push:
tags:
- v*
env:
PREREQS_ENV: ${{github.workspace}}/prereqs.sh
PREREQS_INSTALL_DIR: ${{github.workspace}}/prereqs
PROTOBUF_VERSION: 3.19.4
CMAKE_INSTALL_PREFIX: ${{github.workspace}}/install
GENOMICSDB_BUILD_DIR: ${{github.workspace}}/build
BUILD_DISTRIBUTABLE_LIBRARY: true
jobs:
build-and-push-mac-dylib:
runs-on: macos-11
permissions:
contents: read
packages: write
steps:
- name: Checkout repository
uses: actions/checkout@v3
- name: Cache built prerequisites
uses: actions/cache@v2
with:
path: |
${{env.PREREQS_INSTALL_DIR}}
~/.m2/repository
~/awssdk-install
~/gcssdk-install
~/protobuf-install/${{env.PROTOBUF_VERSION}}
key: ${{matrix.os}}-cache-prereqs-v5
- name: Set version number
run: echo VERSION_NUMBER=${GITHUB_REF_NAME:1} >> $GITHUB_ENV
- name: Install Prerequisites
shell: bash
working-directory: ${{github.workspace}}/scripts/prereqs
run: |
echo "Installing Prerequistes for MacOS..."
export INSTALL_PREFIX=$PREREQS_INSTALL_DIR
./install_prereqs.sh
- name: Build GenomicsDB distributable
shell: bash
run: |
echo "Building GenomicsDB for MacOS..."
export INSTALL_PREFIX=$PREREQS_INSTALL_DIR
mkdir -p $GENOMICSDB_BUILD_DIR
source $PREREQS_ENV
cmake $GITHUB_WORKSPACE -DCMAKE_BUILD_TYPE=Release -DCMAKE_INSTALL_PREFIX=$CMAKE_INSTALL_PREFIX \
-DCMAKE_PREFIX_PATH=$PREREQS_INSTALL_DIR -DGENOMICSDB_PROTOBUF_VERSION=$PROTOBUF_VERSION \
-DGENOMICSDB_RELEASE_VERSION=${VERSION_NUMBER} -DBUILD_JAVA=1 -DUSE_HDFS=1 -DBUILD_DISTRIBUTABLE_LIBRARY=1
make -j4
make install
cp $CMAKE_INSTALL_PREFIX/lib/libtiledbgenomicsdb.dylib .
- name: Archive libraries as artifact
uses: actions/upload-artifact@v3
with:
name: libtiledbgenomicsdb.dylib.${{ github.ref_name }}
path: libtiledbgenomicsdb.dylib
release-jar:
needs: [build-and-push-mac-dylib]
uses: ./.github/workflows/release_jar.yml
with:
dylib_artifact: libtiledbgenomicsdb.dylib.${{ github.ref_name }}
test:
needs: [release-jar]
uses: ./.github/workflows/release_test.yml
with:
release_artifact: release.${{ github.ref_name }}
publish:
needs: [test]
uses: ./.github/workflows/release_publish.yml
with:
release_artifact: release.${{ github.ref_name }}
secrets: inherit
|
