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Description: adding missing dependencies in the pom, and also tweaking a bit
the protobuf lines so that .proto files are effectively treated
Author: Pierre Gruet <pgt@debian.org>
Forwarded: https://github.com/GenomicsDB/GenomicsDB/issues/231
Last-Update: 2022-07-26
--- a/pom.xml
+++ b/pom.xml
@@ -145,6 +145,22 @@
<artifactId>java-getopt</artifactId>
<version>${gnu.getopt.version}</version>
</dependency>
+ <dependency>
+ <groupId>commons-io</groupId>
+ <artifactId>commons-io</artifactId>
+ <version>debian</version>
+ </dependency>
+ <dependency>
+ <groupId>com.google.guava</groupId>
+ <artifactId>guava</artifactId>
+ <version>debian</version>
+ </dependency>
+ <dependency>
+ <groupId>org.apache.commons</groupId>
+ <artifactId>commons-lang3</artifactId>
+ <version>debian</version>
+ <scope>test</scope>
+ </dependency>
</dependencies>
<build>
@@ -338,7 +354,7 @@
<reuseForks>true</reuseForks>
<parallel>all</parallel>
<useUnlimitedThreads>true</useUnlimitedThreads>
- <argLine>${surefireJacoco} ${surefireArgLine}</argLine>
+ <argLine>${surefireArgLine}</argLine>
<systemPropertyVariables>
<buildDirectory>${project.build.directory}</buildDirectory>
<log4j.configuration>file:${genomicsdb_source_directory}/src/resources/log4j.properties</log4j.configuration>
@@ -424,7 +440,9 @@
<include name="**/*.proto"/>
</fileset>
</path>
- <pathconvert pathsep=" " property="protobuf.input.filepaths" refid="protobuf.input.filepaths.path"/>
+ <pathconvert pathsep=" " property="protobuf.input.filepaths" refid="protobuf.input.filepaths.path">
+ <map from="${basedir}${file.separator}" to="" />
+ </pathconvert>
<exec executable="${protoc.filepath}" failonerror="true">
<arg value="-I"/>
<arg value="${protobuf.input.directory}"/>
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