File: filled.gfa1

package info (click to toggle)
gfapy 1.2.3%2Bdfsg-2
  • links: PTS, VCS
  • area: main
  • in suites: bookworm
  • size: 2,036 kB
  • sloc: python: 11,777; sh: 167; makefile: 68
file content (10 lines) | stat: -rw-r--r-- 438 bytes parent folder | download | duplicates (2) 
1
2
3
4
5
6
7
8
9
10
 
H	VN:Z:1.0
S	s1	ACGTACGTACGTACGTACGTACGTACGTACGTACGTACGTTCCG	LN:i:44
S	s2	ACGTTCGTACGTACGTACGTACGTAAACGGTAC	LN:i:33
S	s3	ACGTAAACGTACGTACGTACGTACGTACGTACGTACGTACGTACGTACGTACGTACGTACGTTTTTACGTACGTA	LN:i:75
S	s4	ACGTACGTACGTTTTTTACGTACGTACGTACGTACGTACGTACGTACGTACGTACGGAACGTAGTACGTACGTACGTACG	LN:i:80
S	s5	*	LN:i:90	xx:Z:not in the Fasta, should accept and warn
L	s1	+	s2	+	5M1I2M
L	s2	+	s3	+	8M1D3M
L	s3	+	s4	+	16M1I9M
L	s4	-	s1	+	8M1I16M