1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
|
# File used for the collections test
# similar but NOT equivalent to the gfa1 file!
S 3 29 TGCTAGCTGACTGTCGATGCTGTGTG
E 1_to_2 1+ 2+ 110 122$ 0 12 12M
S 5 130 *
S 13 150 *
E 2_to_6 2+ 6+ 0 122$ 10 132 122M
O 14 11+ 12+
S 11 140 * xx:i:11
F 2 read1+ 0 42 12 55 * id:Z:read1_in_2
F 2 read2+ 45 62 0 18 * id:Z:read2_in_2
U 16 1 3 15 2_to_6 16sub
H ac:Z:test2
# another comment
S 12 150 *
S 4 120 *
H VN:Z:2.0
E 1_to_3 1+ 3+ 112 122$ 0 12 10M
G 1_to_11 1+ 11- 120 *
E 11_to_12 11+ 12+ 18 140$ 0 122 122M
S 6 150 *
X custom_record xx:Z:testtag
X custom_record X2
E 11_to_13 11+ 13+ 20 140$ 0 120 120M
G 2_to_12 2- 12+ 500 50
O 15 11+ 11_to_13+ 13+ xx:i:-1
Y another_custom_record
U 16sub 2 3
S 2 120 * xx:Z:sometag
H aa:i:12 ab:Z:test1
H aa:i:15
E 1_to_5 1+ 5+ 0 122$ 2 124 * zz:Z:tag
|
