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<h1> Ghemical v2.00</h1>
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<h1> User's Manual</h1>
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<p>Copyright (C) 2001- Christopher Rowley, Tommi Hassinen. </p>
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<h3> Table of Contents</h3>
<a href="introduction.html">1. Introduction</a> <br>
<blockquote><a href="introduction.html#changes_100">1.1 Changes from version
1.00</a><br>
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<a href="using_mm.html"> 2. User's Manual</a><br>
<blockquote><a href="using_mm.html">2.1 Molecular Mechanics Modelling</a><br>
<blockquote><a href="using_mm.html">2.1.1 Quick Start : modelling Ethane</a><br>
<a href="perspective.html">2.1.2 Changing the 3D-views</a><br>
<a href="add_hydrogens.html">2.1.3 Add Hydrogens Tool</a><br>
<a href="geometry_optimization.html">2.1.4 Geometry Optimization</a><br>
<a href="labels.html">2.1.5 Labeling Atoms and Bonds</a><br>
<a href="formula.html">2.1.6 The Formula Tool</a><br>
<a href="measure.html">2.1.7 Measuring Tools</a><br>
<a href="visualization.html">2.1.8 Visualization Tools</a><br>
<a href="MD.html">2.1.9 Molecular Dynamics</a><br>
<a href="MD_viewer.html">2.1.10 Molecular Dynamics Viewer</a><br>
<a href="conf_search_tools.html">2.1.11 Conformational Search Tools</a><br>
<a href="energy_vs_torsion.html">2.1.12 1D and 2D Energy vs. Torsion Plots</a><br>
<a href="sequence_builder.html">2.1.13 Sequence Builder</a><br>
<a href="ribbon.html">2.1.14 Ribbon Model visualization tool</a><br>
<a href="setup_dialog.html">2.1.15 The Setup Dialog</a><br>
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<a href="aa_table.html">2.4 Appendix 1 : Amino
Acid Abbreviations Table</a><br>
<a href="filetypes.html">2.5 Appendix 2 : Filetypes
for Import and Export</a><br>
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<a href="references.html">3. References<br>
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