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Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
Upstream-Contact: Martin C Frith <martin@cbrc.jp>
Timothy L Bailey <t.bailey@imb.uq.edu.au>
Source: http://bioinformatics.org.au/glam2/archive/glam2-1064.zip
Glam2 is now included into the MEME software suite and not
maintained separately at this place any more. Since MEME is non-free
we are keeping this old version of glam2 in Debian. Se also
https://lists.debian.org/debian-med/2013/11/msg00034.html
Upstream-Name: GLAM2
Files: *
Copyright: 2007 Martin C Frith <martin@cbrc.jp>
2007 Timothy L Bailey <t.bailey@imb.uq.edu.au>
License: PD_glam
GLAM2 was developed by Martin C Frith, working at the Computational Biology
Research Center in Tokyo, and Timothy L Bailey, working at the Institute for
Molecular Bioscience in Brisbane. The source code and documentation are hereby
released into the public domain. If you use GLAM2, please cite: MC Frith, NFW
Saunders, B Kobe, TL Bailey (2008) Discovering sequence motifs with arbitrary
insertions and deletions, PLoS Computational Biology (PLoS Comput Biol. 2008
Apr 25;4(4):e1000071.).
Files: purge/*
Copyright: Andrew Neuwald
License: PD_ncbi
PUBLIC DOMAIN NOTICE
National Center for Biotechnology Information
.
This software/database is a "United States Government Work" under the
terms of the United States Copyright Act. It was written as part of
the author's official duties as a United States Government employee and
thus cannot be copyrighted. This software is freely available to the
public for use. The National Library of Medicine and the U.S. Government
have not placed any restriction on its use or reproduction.
.
Although reasonable efforts have been taken to ensure the accuracy
and reliability of the software and data, the NLM and the U.S.
Government do not and cannot warrant the performance or results that
may be obtained by using this software or data. The NLM and the U.S.
Government disclaim all warranties, express or implied, including
warranties of performance, merchantability or fitness for any particular
purpose.
.
Please cite
.
Neuwald, Liu, & Lawrence (1995) "Gibbs motif sampling:
detection of bacterial outer membrane protein repeats"
Protein Science 4, 1618-1632. (for Gibbs site sampling,
Gibbs motif sampling, purge, and scan programs)
.
and
.
Lawrence, Altschul, Boguski, Liu, Neuwald & Wootton (1993)
"Detecting Subtle Sequence Signals: A Gibbs Sampling Strategy
for Multiple Alignment", Science 262:208-214. (for Gibbs
site sampling program)
.
in any work or product based on this material.
.
The data structures used in this program are part of a package
of C code for molecular biological applications being developed
by A. F. Neuwald.
Files: debian/*
Copyright: 2007 Steffen Moeller <moeller@debian.org>
2007-2008 Charles Plessy <plessy@debian.org>
2011-2013 Andreas Tille <tille@debian.org>
License: PD
The package is in the public domain and so shall then be
the packaging for Debian of Steffen Moeller <moeller@debian.org>
and Charles Plessy <plessy@debian.org>.
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