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#!/usr/bin/env python
"""
Guide users through installing Glue's dependencies
"""
import os
from collections import OrderedDict
import sys
import importlib
from glue._plugin_helpers import iter_plugin_entry_points
class Dependency(object):
def __init__(self, module, info, package=None, min_version=None):
self.module = module
self.info = info
self.package = package or module
self.min_version = min_version
self.failed = False
@property
def installed(self):
try:
importlib.import_module(self.module)
return True
except ImportError:
return False
@property
def version(self):
try:
module = __import__(self.module)
return module.__version__
except ImportError:
return 'unknown version'
except AttributeError:
try:
return module.__VERSION__
except AttributeError:
return 'unknown version'
def help(self):
result = """
{module}:
******************
{info}
PIP package name:
{package}
""".format(module=self.module, info=self.info, package=self.package)
return result
def __str__(self):
if self.installed:
status = 'INSTALLED (%s)' % self.version
elif self.failed:
status = 'FAILED (%s)' % self.info
else:
status = 'MISSING (%s)' % self.info
return "%20s:\t%s" % (self.package, status)
class Python(Dependency):
def __init__(self):
self.package = 'Python'
@property
def installed(self):
return True
@property
def version(self):
return sys.version.split()[0]
class QtDependency(Dependency):
def __str__(self):
if self.installed:
status = 'INSTALLED (%s)' % self.version
else:
status = 'NOT INSTALLED'
return "%20s:\t%s" % (self.module, status)
class PyQt5(QtDependency):
@property
def version(self):
try:
from PyQt5 import Qt
return "PyQt: {0} - Qt: {1}".format(Qt.PYQT_VERSION_STR, Qt.QT_VERSION_STR)
except (ImportError, AttributeError):
return 'unknown version'
class PySide2(QtDependency):
@property
def version(self):
try:
import PySide2
from PySide2 import QtCore
return "PySide2: {0} - Qt: {1}".format(PySide2.__version__, QtCore.__version__)
except (ImportError, AttributeError):
return 'unknown version'
class QtPy(Dependency):
@property
def installed(self):
try:
importlib.import_module(self.module)
return True
except Exception:
# QtPy raises a PythonQtError in some cases, so we can't use
# ImportError.
return False
# Add any dependencies here
# Make sure to add new categories to the categories tuple
python = (
Python(),
)
gui_framework = (
PyQt5('PyQt5', ''),
PySide2('PySide2', '')
)
required = (
QtPy('qtpy', 'Required', min_version='1.9'),
Dependency('setuptools', 'Required', min_version='30.3'),
Dependency('echo', 'Required', min_version='0.5'),
Dependency('numpy', 'Required', min_version='1.16'),
Dependency('bottleneck', 'Required', min_version='1.2'),
Dependency('matplotlib', 'Required for plotting', min_version='3.2'),
Dependency('pandas', 'Adds support for Excel files and DataFrames', min_version='1.0'),
Dependency('astropy', 'Used for FITS I/O, table reading, and WCS Parsing', min_version='4.0'),
Dependency('dill', 'Used when saving Glue sessions', min_version='0.2'),
Dependency('h5py', 'Used to support HDF5 files', min_version='2.10'),
Dependency('xlrd', 'Used to support Excel files', min_version='1.2'),
Dependency('mpl_scatter_density', 'Used to make fast scatter density plots', 'mpl-scatter-density', min_version='0.7'),
)
general = (
Dependency('scipy', 'Used for some image processing calculation', min_version='1.0'),
Dependency('skimage',
'Used to read popular image formats (jpeg, png, etc.)',
'scikit-image'))
ipython = (
Dependency('IPython', 'Needed for interactive IPython terminal', min_version='4'),
Dependency('qtconsole', 'Needed for interactive IPython terminal'),
Dependency('ipykernel', 'Needed for interactive IPython terminal'),
Dependency('traitlets', 'Needed for interactive IPython terminal'),
Dependency('pygments', 'Needed for interactive IPython terminal'),
Dependency('zmq', 'Needed for interactive IPython terminal', 'pyzmq'))
astronomy = (
Dependency('pyavm', 'Used to parse AVM metadata in image files', 'PyAVM'),
Dependency('spectral_cube', 'Used to read in spectral cubes', 'spectral-cube'),
Dependency('astrodendro', 'Used to read in and represent dendrograms', 'astrodendro'))
testing = (
Dependency('mock', 'Used in test code'),
Dependency('pytest', 'Used in test code'))
export = (
Dependency('plotly', 'Used to explort plots to Plot.ly'),
)
def plugins():
modules = []
dependencies = []
for entry_point in iter_plugin_entry_points():
module_name = entry_point.module_name.split('.')[0]
package = entry_point.dist.project_name
modules.append((module_name, package))
for module, package in sorted(set(modules)):
dependencies.append(Dependency(module, '', package=package))
return dependencies
categories = (('python', python),
('gui framework', gui_framework),
('required', required),
('plugins', plugins()),
('ipython terminal', ipython),
('general', general),
('astronomy', astronomy),
('testing', testing),
('export', export))
dependencies = dict((d.package, d) for c in categories for d in c[1])
def get_status():
s = ""
for category, deps in categories:
s += "%21s" % category.upper() + os.linesep
for dep in deps:
s += str(dep) + os.linesep
s += os.linesep
return s
def get_status_as_odict():
status = OrderedDict()
for category, deps in categories:
for dep in deps:
if dep.installed:
status[dep.package] = dep.version
else:
status[dep.package] = "Not installed"
return status
def show_status():
print(get_status())
USAGE = """usage:
#show all dependencies
glue-deps list
#display information about a dependency
glue-deps info astropy
"""
def main(argv=None):
argv = argv or sys.argv
if len(argv) < 2 or argv[1] not in ['list', 'info']:
sys.stderr.write(USAGE)
sys.exit(1)
if argv[1] == 'info':
if len(argv) != 3:
sys.stderr.write(USAGE)
sys.stderr.write("Please specify a dependency\n")
sys.exit(1)
dep = dependencies.get(argv[2], None)
if dep is None:
sys.stderr.write("Unrecognized dependency: %s\n" % argv[2])
sys.exit(1)
print(dep.help())
sys.exit(0)
if argv[1] == 'list':
show_status()
sys.exit(0)
if __name__ == "__main__":
main()
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