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usr/bin/gmap
usr/bin/gsnap
usr/bin/gmap_setup
usr/bin/atoiindex /usr/lib/gmap
usr/bin/cmetindex /usr/lib/gmap
usr/bin/dbsnp_iit /usr/lib/gmap
usr/bin/fa_coords /usr/lib/gmap
usr/bin/get-genome /usr/lib/gmap
usr/bin/gmap_build /usr/lib/gmap
usr/bin/gmap_compress /usr/lib/gmap
usr/bin/gmap_process /usr/lib/gmap
usr/bin/gmap_reassemble /usr/lib/gmap
usr/bin/gmap_uncompress /usr/lib/gmap
usr/bin/gmapindex /usr/lib/gmap
# usr/bin/gsnap_tally /usr/lib/gmap
usr/bin/gtf_genes /usr/lib/gmap
usr/bin/gtf_splicesites /usr/lib/gmap
usr/bin/iit_dump /usr/lib/gmap
usr/bin/iit_get /usr/lib/gmap
usr/bin/iit_store /usr/lib/gmap
usr/bin/md_coords /usr/lib/gmap
usr/bin/psl_genes /usr/lib/gmap
usr/bin/psl_splicesites /usr/lib/gmap
usr/bin/snpindex /usr/lib/gmap
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