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Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/
Upstream-Name: GMAP
Upstream-Contact: Thomas Wu <twu@gene.com>, Colin K. Watanabe <ckw@gene.com>
Source: http://research-pub.gene.com/gmap/
Files: *
Copyright: 2011-2014 Genentech, Inc.
License: other
Permission is hereby granted, free of charge, to any person obtaining
a copy of this software and associated documentation files (the
"Package"), to use, copy, and distribute copies of the Package,
without modifications, provided that the above copyright notice and
this permission notice are included in all copies or substantial
portions of the Package. Distribution of this Package as part of a
commercial software product requires prior arrangement with the
Developers.
.
Permission is also hereby granted, free of charge, to any person
obtaining a copy of this Package, to modify your copy or copies of the
Package or any portion of it, provided that you use the modified
Package only within your corporation or organization. Distribution of
a modified version of this Package requires prior arrangement with the
Developers.
.
Genome databases, map files, and other result files produced as output
from software in this Package do not automatically fall under the
copyright of this Package, but belong to whoever generated them, and
may be distributed freely.
.
IN NO EVENT SHALL GENENTECH, INC. BE LIABLE TO ANY PARTY FOR DIRECT,
INDIRECT, SPECIAL, INCIDENTAL, OR CONSEQUENTIAL DAMAGES, OR OTHER
LIABILITY, INCLUDING LOST PROFITS, ARISING FROM THE USE OF THIS
SOFTWARE.
.
THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
EXPRESS OR IMPLIED, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE.
GENENTECH, INC. HAS NO OBLIGATION TO PROVIDE MAINTENANCE, SUPPORT,
UPDATES, ENHANCEMENTS, OR MODIFICATIONS.
Comment:
Some inspiration and code was taken from
https://github.com/lemire/FastPFor,
covered by Apache-2.0 License
Files: src/getopt*
Copyright: 2002 Free Software Foundation, Inc.
License: LGPL-2.1+
See `/usr/share/common-licenses/LGPL-2.1'.
Files: src/saca-k*
Copyright: 2012 Ge Nong <issng@mail.sysu.edu.cn>
License: MIT
Permission is hereby granted, free of charge, to any person obtaining a copy
of this software and associated documentation files (the "Software"), to deal
in the Software without restriction, including without limitation the rights
to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
copies of the Software, and to permit persons to whom the Software is
furnished to do so, subject to the following conditions:
.
The above copyright notice and this permission notice shall be included in
all copies or substantial portions of the Software.
.
THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
THE SOFTWARE.
Files: src/fastlog.h
Copyright: 2012 Paul Mineiro <paul@mineiro.com>
License: BSD-3-clause
Redistribution and use in source and binary forms, with
or without modification, are permitted provided that the
following conditions are met:
.
* Redistributions of source code must retain the
above copyright notice, this list of conditions and
the following disclaimer.
.
* Redistributions in binary form must reproduce the
above copyright notice, this list of conditions and
the following disclaimer in the documentation and/or
other materials provided with the distribution.
.
* Neither the name of Paul Mineiro nor the names
of other contributors may be used to endorse or promote
products derived from this software without specific
prior written permission.
.
THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND
CONTRIBUTORS "AS IS" AND ANY EXPRESS OR IMPLIED WARRANTIES,
INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES
OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE
ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER
OR CONTRIBUTORS BE LIABLE FOR ANY DIRECT, INDIRECT,
INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
(INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE
GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR
BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF
LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
(INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY
OUT OF THE USE OF THIS SOFTWARE, EVEN IF ADVISED OF THE
POSSIBILITY OF SUCH DAMAGE.
Files: debian/*
Copyright: 2011 Shaun Jackman <sjackman@debian.org>
2012-2014 Andreas Tille <tille@debian.org>
2014 Alex Mestiashvili <alex@biotec.tu-dresden.de>
License: ISC
Permission to use, copy, modify, and/or distribute this software for any
purpose with or without fee is hereby granted, provided that the above
copyright notice and this permission notice appear in all copies.
|
