File: align.test.in

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gmap 2017-01-14-1
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#! @SHELL@

if test -z "$srcdir"; then
  srcdir=.
fi
. ${srcdir}/defs


${top_builddir}/src/gmap -A -g ${srcdir}/ss.chr17test ${srcdir}/ss.her2 > align.test.out
diff align.test.out ${srcdir}/align.test.ok