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// Gmsh - Copyright (C) 1997-2021 C. Geuzaine, J.-F. Remacle
//
// See the LICENSE.txt file for license information. Please report all
// issues on https://gitlab.onelab.info/gmsh/gmsh/issues.
#include <set>
#include "Skin.h"
#include "Context.h"
#include "GmshDefines.h"
#include "MTriangle.h"
#include "MQuadrangle.h"
#include "MLine.h"
#include "MFace.h"
#include "MEdge.h"
#include "discreteFace.h"
#include "discreteEdge.h"
StringXNumber SkinOptions_Number[] = {{GMSH_FULLRC, "Visible", nullptr, 1.},
{GMSH_FULLRC, "FromMesh", nullptr, 0.},
{GMSH_FULLRC, "View", nullptr, -1.}};
extern "C" {
GMSH_Plugin *GMSH_RegisterSkinPlugin() { return new GMSH_SkinPlugin(); }
}
std::string GMSH_SkinPlugin::getHelp() const
{
return "Plugin(Skin) extracts the boundary (skin) of the current "
"mesh (if `FromMesh' = 1), or from the the view `View' (in which "
"case it creates a new view). If `View' < 0 and `FromMesh' = 0, "
"the plugin is run on the current view.\n"
"If `Visible' is set, the plugin only extracts the skin of visible "
"entities.";
}
int GMSH_SkinPlugin::getNbOptions() const
{
return sizeof(SkinOptions_Number) / sizeof(StringXNumber);
}
StringXNumber *GMSH_SkinPlugin::getOption(int iopt)
{
return &SkinOptions_Number[iopt];
}
class ElmData {
public:
int numComp;
std::vector<double> x, y, z;
std::vector<double> v;
ElmData(int n) : numComp(n) {}
SPoint3 barycenter() const
{
SPoint3 p(0., 0., 0.);
int N = x.size();
for(int i = 0; i < N; i++) {
p[0] += x[i];
p[1] += y[i];
p[2] += z[i];
}
p[0] /= (double)N;
p[1] /= (double)N;
p[2] /= (double)N;
return p;
}
void addInView(PViewDataList *data) const
{
std::vector<double> *vec = nullptr;
switch(x.size()) {
case 1:
if(numComp == 1) {
data->NbSP++;
vec = &data->SP;
break;
}
else if(numComp == 3) {
data->NbVP++;
vec = &data->VP;
break;
}
else if(numComp == 9) {
data->NbTP++;
vec = &data->TP;
break;
}
break;
case 2:
if(numComp == 1) {
data->NbSL++;
vec = &data->SL;
break;
}
else if(numComp == 3) {
data->NbVL++;
vec = &data->VL;
break;
}
else if(numComp == 9) {
data->NbTL++;
vec = &data->TL;
break;
}
break;
case 3:
if(numComp == 1) {
data->NbST++;
vec = &data->ST;
break;
}
else if(numComp == 3) {
data->NbVT++;
vec = &data->VT;
break;
}
else if(numComp == 9) {
data->NbTT++;
vec = &data->TT;
break;
}
break;
case 4:
if(numComp == 1) {
data->NbSQ++;
vec = &data->SQ;
break;
}
else if(numComp == 3) {
data->NbVQ++;
vec = &data->VQ;
break;
}
else if(numComp == 9) {
data->NbTQ++;
vec = &data->TQ;
break;
}
break;
}
if(!vec) return;
for(std::size_t i = 0; i < x.size(); i++) vec->push_back(x[i]);
for(std::size_t i = 0; i < y.size(); i++) vec->push_back(y[i]);
for(std::size_t i = 0; i < z.size(); i++) vec->push_back(z[i]);
for(std::size_t i = 0; i < v.size(); i++) vec->push_back(v[i]);
}
};
class ElmDataLessThan {
public:
static double tolerance;
bool operator()(const ElmData &e1, const ElmData &e2) const
{
SPoint3 p1 = e1.barycenter();
SPoint3 p2 = e2.barycenter();
if(p1.x() - p2.x() > tolerance) return true;
if(p1.x() - p2.x() < -tolerance) return false;
if(p1.y() - p2.y() > tolerance) return true;
if(p1.y() - p2.y() < -tolerance) return false;
if(p1.z() - p2.z() > tolerance) return true;
return false;
}
};
double ElmDataLessThan::tolerance = 1.e-12;
static int getBoundary(int type, const int (**boundary)[6][4])
{
static const int tri[6][4] = {{0, 1, -1, -1}, {1, 2, -1, -1}, {2, 0, -1, -1}};
static const int qua[6][4] = {
{0, 1, -1, -1}, {1, 2, -1, -1}, {2, 3, -1, -1}, {3, 0, -1, -1}};
static const int tet[6][4] = {
{0, 1, 3, -1}, {0, 2, 1, -1}, {0, 3, 2, -1}, {1, 2, 3, -1}};
static const int hex[6][4] = {{0, 1, 5, 4}, {0, 3, 2, 1}, {0, 4, 7, 3},
{1, 2, 6, 5}, {2, 3, 7, 6}, {4, 5, 6, 7}};
static const int pri[6][4] = {
{0, 1, 4, 3}, {0, 3, 5, 2}, {1, 2, 5, 4}, {0, 2, 1, -1}, {3, 4, 5, -1}};
static const int pyr[6][4] = {
{0, 3, 2, 1}, {0, 1, 4, -1}, {0, 4, 3, -1}, {1, 2, 4, -1}, {2, 3, 4, -1}};
switch(type) {
case TYPE_TRI: *boundary = &tri; return 3;
case TYPE_QUA: *boundary = &qua; return 4;
case TYPE_TET: *boundary = &tet; return 4;
case TYPE_HEX: *boundary = &hex; return 6;
case TYPE_PRI: *boundary = &pri; return 5;
case TYPE_PYR: *boundary = &pyr; return 5;
default: return 0;
}
}
static void getBoundaryFromMesh(GModel *m, int visible)
{
int dim = m->getDim();
std::vector<GEntity *> entities;
m->getEntities(entities);
std::set<MFace, MFaceLessThan> bndFaces;
std::set<MEdge, MEdgeLessThan> bndEdges;
for(std::size_t i = 0; i < entities.size(); i++) {
GEntity *ge = entities[i];
if(ge->dim() != dim) continue;
if(visible && !ge->getVisibility()) continue;
for(std::size_t j = 0; j < ge->getNumMeshElements(); j++) {
MElement *e = ge->getMeshElement(j);
if(dim == 2) {
for(int i = 0; i < e->getNumEdges(); i++) {
MEdge f = e->getEdge(i);
if(bndEdges.find(f) == bndEdges.end())
bndEdges.insert(f);
else
bndEdges.erase(f);
}
}
else if(dim == 3) {
for(int i = 0; i < e->getNumFaces(); i++) {
MFace f = e->getFace(i);
if(bndFaces.find(f) == bndFaces.end())
bndFaces.insert(f);
else
bndFaces.erase(f);
}
}
}
}
if(dim == 2) {
discreteEdge *e =
new discreteEdge(m, m->getMaxElementaryNumber(1) + 1, nullptr, nullptr);
m->add(e);
for(auto it = bndEdges.begin(); it != bndEdges.end(); it++) {
e->lines.push_back(new MLine(it->getVertex(0), it->getVertex(1)));
}
}
else if(dim == 3) {
discreteFace *f = new discreteFace(m, m->getMaxElementaryNumber(2) + 1);
m->add(f);
for(auto it = bndFaces.begin(); it != bndFaces.end(); it++) {
if(it->getNumVertices() == 3)
f->triangles.push_back(
new MTriangle(it->getVertex(0), it->getVertex(1), it->getVertex(2)));
else if(it->getNumVertices() == 4)
f->quadrangles.push_back(
new MQuadrangle(it->getVertex(0), it->getVertex(1), it->getVertex(2),
it->getVertex(3)));
}
}
}
PView *GMSH_SkinPlugin::execute(PView *v)
{
int visible = (int)SkinOptions_Number[0].def;
int fromMesh = (int)SkinOptions_Number[1].def;
int iView = (int)SkinOptions_Number[2].def;
// compute boundary of current mesh
if(fromMesh) {
getBoundaryFromMesh(GModel::current(), visible);
return v;
}
// compute boundary of post-processing data set
PView *v1 = getView(iView, v);
if(!v1) return v;
PViewData *data1 = getPossiblyAdaptiveData(v1);
if(data1->hasMultipleMeshes()) {
Msg::Error("Skin plugin cannot be applied to multi-mesh views");
return v;
}
Msg::Info("Extracting boundary from View[%d]", v1->getIndex());
PView *v2 = new PView();
PViewDataList *data2 = getDataList(v2);
std::set<ElmData, ElmDataLessThan> skin;
ElmDataLessThan::tolerance = CTX::instance()->lc * 1.e-12;
int firstNonEmptyStep = data1->getFirstNonEmptyTimeStep();
for(int ent = 0; ent < data1->getNumEntities(firstNonEmptyStep); ent++) {
if(visible && data1->skipEntity(firstNonEmptyStep, ent)) continue;
for(int ele = 0; ele < data1->getNumElements(firstNonEmptyStep, ent);
ele++) {
if(data1->skipElement(firstNonEmptyStep, ent, ele, visible)) continue;
int numComp = data1->getNumComponents(firstNonEmptyStep, ent, ele);
int type = data1->getType(firstNonEmptyStep, ent, ele);
const int(*boundary)[6][4];
int numBoundary = getBoundary(type, &boundary);
if(!numBoundary) continue;
for(int i = 0; i < numBoundary; i++) {
ElmData e(numComp);
for(int j = 0; j < 4; j++) {
int nod = (*boundary)[i][j];
if(nod < 0) continue;
double x, y, z;
data1->getNode(firstNonEmptyStep, ent, ele, nod, x, y, z);
e.x.push_back(x);
e.y.push_back(y);
e.z.push_back(z);
}
auto it = skin.find(e);
if(it == skin.end()) {
for(int step = 0; step < data1->getNumTimeSteps(); step++) {
if(data1->hasTimeStep(step)) {
for(int j = 0; j < 4; j++) {
int nod = (*boundary)[i][j];
if(nod < 0) continue;
double v;
for(int comp = 0; comp < numComp; comp++) {
data1->getValue(step, ent, ele, nod, comp, v);
e.v.push_back(v);
}
}
}
}
skin.insert(e);
}
else
skin.erase(it);
}
}
}
for(auto it = skin.begin(); it != skin.end(); it++) it->addInView(data2);
for(int i = 0; i < data1->getNumTimeSteps(); i++)
if(data1->hasTimeStep(i)) data2->Time.push_back(data1->getTime(i));
data2->setName(data1->getName() + "_Skin");
data2->setFileName(data1->getName() + "_Skin.pos");
data2->finalize();
return v2;
}
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