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##Text encoding: utf-8
2017-02-07 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: version bump (0.14.17).
* libs/gcp/bond.cc: new properties for bonds crossing.
* libs/gcu/objprops.h: ditto.
* plugins/loaders/cdx/cdx.cc: fix import of generic fragments and crossing
bonds. [50190]
* plugins/loaders/cdxml/cdxml.cc: ditto.
* programs/table/gchemtable.desktop.in.in: add missing line feed.
2016-12-06 Julian Sikorski <belegdol@gmail.com>
* programs/table/gchemtable.desktop.in.in: re-added missing newline (rhbz #1402039)
2016-11-23 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: version bump (0.14.16).
* libs/gcp/application.cc: do not crash when a NULL tool is selected.
* plugins/paint/bonds/plugin.cc: do not show unimplemented weak bond tool
button.
2016-11-23 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: do not crash when a NULL tool is selected.
2016-11-23 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: do not crash when a NULL tool is selected.
2016-10-31 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text.cc: don't use the abs() function on unsigned numbers.
* programs/3d/gchem3d.appdata.xml.in: updated.
* programs/calc/gchemcalc.appdata.xml.in: updated.
* programs/crystal/gcrystal.appdata.xml.in: updated.
* programs/paint/gchempaint.appdata.xml.in: updated.
* programs/spectra/gspectrum.appdata.xml.in: updated.
* programs/table/gchemtable.appdata.xml.in: updated.
2016-07-05 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.14.15).
2016-07-04 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: fix mozilla plugin build.
* mozilla-plugin/Makefile.am: ditto.
2016-07-03 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.14.14).
2016-06-26 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/application.cc: retry when conncetion to babel server fails.
2016-06-21 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/text/mathtool.h: add a help tag.
* docs/help/paint/C: updated user documentation.
2016-06-19 Jean Bréfort <jean.brefort@normalesup.org>
* gnumeric/functions.cc: backported new functions from trunk.
* gnumeric/plugin.xml.in.in: ditto.
* libs/gcu/chemistry.cc: ditto.
* libs/gcu/chemistry.h: ditto.
2016-06-18 Jean Bréfort <jean.brefort@normalesup.org>
* database/elements.xml.in: update names for elements 113, 115, 177 and 118.
2016-06-17 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/document.cc: fix crash when deleting a bond outside a molecule.
[#48256]
2016-06-07 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: fix change of the abs() function signature with
recent g++.
2016-05-18 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: make lasem use optional.
* libs/gccv/Makefile.am: ditto.
* plugins/paint/text/Makefile.am: ditto.
* plugins/paint/text/plugin.cc: ditto.
2016-05-03 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/line.cc: fix crossing bonds rendering.
2016-05-02 Jean Bréfort <jean.brefort@normalesup.org>
* all files: backport display and math equation support from trunk.
2016-05-01 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/canvas.cc: restore canvas background with gtk+-3.20.
* libs/gcp/application.cc: ditto.
* libs/gcp/view.cc: ditto.
2016-04-30 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: fix gcc-6/g++-6 warnings.
* libs/gcp/document.cc: ditto.
* libs/gcp/molecule.cc: ditto.
* libs/gcr/gcrcrystalviewer.cc: ditto.
* libs/gcu/application.cc: ditto.
* libs/gcu/chem3ddoc.cc: ditto.
* libs/gcugtk/chem3dwindow.cc: ditto.
* libs/gcugtk/molecule.cc: ditto.
* libs/gcugtk/spectrumdoc.cc: ditto.
* plugins/loaders/cdx/cdx.cc: ditto.
* plugins/loaders/cdxml/cdxml.cc: ditto.
* programs/crystal/document.cc: ditto.
2016-03-28 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.14.13).
2016-03-27 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/loaders/cdx/cdx.cc: avoid playing with scheme having different
kind of arrows.
* plugins/loaders/cdxml/cdxml.cc: ditto and don't duplicate atom symbols.
2016-03-26 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text.cc: fix GetMaxLineHeight().
* plugins/loaders/cdx/cdx.cc: import and export retrosynthesis.
* plugins/loaders/cdxml/cdxml.cc: ditto.
* plugins/paint/arrows/retrosynthesis.cc: ditto.
* plugins/paint/arrows/retrosynthesis.h: ditto.
* plugins/paint/arrows/retrosynthesisarrow.cc: ditto.
* plugins/paint/arrows/retrosynthesisarrow.h: ditto.
* plugins/paint/arrows/retrosynthesisstep.cc: ditto.
* plugins/paint/arrows/retrosynthesisstep.h: ditto.
2016-03-23 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text-tag.h: removed a useless typedef.
* libs/gccv/text.cc: add Text::GetMaxLineHeight().
* libs/gccv/text.h: ditto.
* libs/gcp/fragment.cc: fix behavior after rotation.
* libs/gcp/mesomer.cc: initialize member.
* libs/gcp/text.cc: new text properties.
* libs/gcp/text.h: ditto.
* libs/gcu/objprops.h: ditto.
* plugins/loaders/cdx/cdx.cc: save fragments and mesomery.
* plugins/loaders/cdxml/cdxml.cc: ditto.
2016-03-21 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text-tag.h: Change gccv::Tag from enum to int (avods runtime
errors).
* libs/gcp/fragment.cc: enhance rotation and GetProperty () method.
* libs/gcp/fragment.h: ditto.
* libs/gcp/molecule.cc: update fragments when loaded.
2016-03-17 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/loaders/cdx/cdx.cc: export title.
* plugins/loaders/cdxml/cdxml.cc: import and export texts and reactions.
2016-03-15 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/loaders/cdx/cdx.cc: remove unused field.
* plugins/loaders/cdxml/cdxml.cc: load reaction schemes.
2016-03-14 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/text.cc: fix position reading in SetProperty().
* plugins/loaders/cdxml/cdxml.cc: fix text import.
2016-03-13 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/loaders/cdx/cdx.cc: fix typo in propery name.
* plugins/loaders/cdxml/cdxml.cc: load and save theme.
2016-03-11 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/bond.cc: add a new position property for double bond display.
* libs/gcp/bond.h: ditto.
* libs/gcp/text.cc: add access to the interline property.
* libs/gcp/theme.cc: add support for PANGO_WEIGHT_SEMILIGHT.
* libs/gcu/objprops.h: new position property for double bond display.
* plugins/loaders/cdx/cdx.cc: enhance imoport and export.
2016-03-09 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/atom.h: fix documentation.
* libs/gcu/molecule.cc: don't crash when analysing "Ac" formula. [#47366]
* programs/calc/gchemcalc.cc: ditto.
2016-03-08 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/document.h: fixed build.
2016-03-07 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: add support for atoms text and font export to CDX
format.
* libs/gcp/atom.h: ditto.
* libs/gcu/objprops.h: ditto.
* plugins/loaders/cdx/cdx.cc: ditto.
2016-03-03 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/loaders/cdx/cdx.cc: fix reading of text with empty runs and avoid
writing such weird objects. [see sr#108952 comments #25-27]
2016-03-01 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.14.12).
2016-02-29 Jean Bréfort <jean.brefort@normalesup.org>
* programs/*/*.desktop.in.in: add a comment for translators.
* schemas/org.gnome.gchemutils.gschema.xml.in.in: fixed a key description.
2016-02-28 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/arrow.cc: enhance reaction import/export to CDX format.
* libs/gcp/arrow.h: ditto.
* libs/gcp/mesomer.cc: ditto.
* libs/gcp/reactant.cc: ditto.
* libs/gcp/reactant.h: ditto.
* libs/gcp/reaction-arrow.cc: ditto.
* libs/gcp/reaction-arrow.h: ditto.
* libs/gcp/reaction-prop.cc: ditto.
* libs/gcp/reaction-prop.h: ditto.
* libs/gcu/object.h: fix documentation.
* plugins/loaders/cdx/cdx.cc: enhance reaction import/export.
2016-02-27 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/arrow.h: typo.
* libs/gcp/mesomer.cc: add a property to set/get the child molecule.
* libs/gcp/mesomer.h: ditto.
* libs/gcp/reaction-arrow.h: typo.
* libs/gcp/reaction-operator.h: ditto..
* libs/gcu/objprops.h: add new properties.
* plugins/loaders/cdx/cdx.cc: fix mesomery loading.
2016-02-27 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/loaders/cdx/cdx.cc: enhance reaction operator position on export.
* programs/3d/gchem3d.desktop.in.in: add keywords.
* programs/calc/gchemcalc.desktop.in.in: ditto.
* programs/crystal/gcrystal.desktop.in.in: ditto.
* programs/paint/gchempaint.desktop.in.in: ditto.
* programs/spectra/gspectrum.desktop.in.in: ditto.
* programs/table/gchemtable.desktop.in.in: ditto.
2016-02-22 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/brackets.cc: fix embedding of a whole molecule. [#47224]
* plugins/paint/selection/bracketstool.cc: fix spacings.
2016-02-21 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/reactant.h: make reaction export to .cdx possible.
* libs/gcp/reaction-prop.cc: ditto.
* libs/gcp/reaction-prop.h: ditto.
* plugins/loaders/cdx/cdx.cc: export reactions.
2016-02-20 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/arrow.cc: export graphic objects to .cdx.
* libs/gcp/arrow.h: ditto.
* libs/gcp/reaction-operator.cc: ditto.
* libs/gcp/reaction-operator.h: ditto.
* libs/gcp/reaction-step.cc: improve operator position.
* libs/gcp/text.cc: enhance position preision on export.
* libs/gcu/atom.cc: ditto.
* plugins/loaders/cdx/cdx.cc: export graphic objects.
2016-02-17 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: add a new direct OpenGL rendering option. [#47169]
* libs/gcr/application.cc: ditto.
* libs/gcr/application.h: ditto.
* libs/gcr/window.cc: ditto.
* libs/gcugtk/Makefile.am: ditto.
* libs/gcugtk/chem3dapplication.cc: ditto.
* libs/gcugtk/chem3dapplication.h: ditto.
* libs/gcugtk/chem3dwindow.cc: ditto.
* libs/gcugtk/glapplication.cc: ditto.
* libs/gcugtk/glapplication.h: ditto.
* libs/gcugtk/glview.cc: ditto.
* libs/gcugtk/glview.h: ditto.
* plugins/loaders/cdx/cdx.cc: attached imported strings to the reaction
arrow.
* programs/paint/gchempaint.desktop.in.in: add keywords.
* schemas/org.gnome.gchemutils.gschema.xml.in.in: add a new direct OpenGL
rendering option.
2016-02-16 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/text.cc: ensure font family is correctly exported.
* plugins/loaders/cdx/cdx.cc: save theme and fix various text export issues.
2016-02-15 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/document.cc: fix build with gcc-6 (and potential crasher).
[Redhat bug #1307546]
* plugins/loaders/cdx/cdx.cc: fix exported text position.
2016-02-13 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: fixd crasher.
* libs/gcp/text.cc: add GetProperty() to allow for text export.
* libs/gcp/text.h: ditto.
* plugins/loaders/cdx/cdx.cc: partial implementation of text export.
* plugins/loaders/cml/cml.cc: typo.
2016-02-08 Jean Bréfort <jean.brefort@normalesup.org>
* programs/table/gchemtable-app.cc: fixed typos. [#47081]
* programs/table/gchemtable-curve.cc: ditto.
* programs/table/gchemtable-data.cc: ditto.
2016-02-07 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/loaders/cdx/cdx.cc: fixed text vertical position.
2016-02-06 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/reactant.cc: fix reaction import from cdx format.
* libs/gcp/reactant.h: ditto.
* libs/gcp/text.cc: ditto.
* plugins/loaders/cdx/cdx.cc: ditto.
2016-02-04 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/reactant.cc: new method needed to import stoichiometry.
* libs/gcp/reactant.h: ditto.
* plugins/loaders/cdx/cdx.cc: detect stoichiometry coefficients in
reactions.
2016-01-29 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/dialog.cc: don't throw an exception in Dialog::SetRealName().
* programs/table/gchemtable-curve.cc: don't crash when showing an already
existing chart. [Redhat bug #1302135]
2016-01-21 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/loaders/cdx/cdx.cc: import reaction and mesomery.
2016-01-20 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/scheme.cc: allow missing products in reactions again.
* plugins/loaders/cdx/cdx.cc: fix strings encoding while loading.
2016-01-19 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/document.cc: fix scale for CDX documents.
* libs/gcu/objprops.h: ditto.
* plugins/loaders/cdx/cdx.cc: ditto.
2016-01-17 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/document.cc: fixed a crasher.
* plugins/loaders/cdx/cdx.cc: enhanced style import.
* plugins/loaders/cdxml/cdxml.cc: fixed DTD.
2016-01-15 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/arrow.cc: fix position setting through GetProperty().
* libs/gcp/fragment.cc: ditto.
* libs/gcu/document.cc: fixed an uninitialized member condition.
* plugins/loaders/cdxml/cdxml.cc: protect against NULL attributes.
2016-01-06 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/molecule.cc: fixed two crashers.
2015-12-20 Jean Bréfort <jean.brefort@normalesup.org>
* programs/3d/gchem3d.appdata.xml.in: add kudos as requested.
* programs/calc/gchemcalc.appdata.xml.in: ditto.
* programs/crystal/gcrystal.appdata.xml.in: ditto.
* programs/paint/gchempaint.appdata.xml.in: ditto.
* programs/paint/gchempaint.desktop.in.in: ditto.
* programs/spectra/gspectrum.appdata.xml.in: ditto.
* programs/table/gchemtable.appdata.xml.in: ditto.
2015-12-17 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/canvas.cc: fix drawing when zoomed.
2015-11-25 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/window.cc: don't crash when importing an invalid string.
[Redhat bug #1285154]
2015-01-23 Jean Bréfort <jean.brefort@normalesup.org>
* programs/3d/gchem3d.appdata.xml.in: one more typo.
* programs/calc/gchemcalc.appdata.xml.in: ditto.
* programs/crystal/gcrystal.appdata.xml.in: ditto.
* programs/paint/gchempaint.appdata.xml.in: ditto.
* programs/spectra/gspectrum.appdata.xml.in: ditto.
* programs/table/gchemtable.appdata.xml.in: ditto.
2015-01-14 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/arrows/retrosynthesis.cc:
2015-01-11 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.14.11).
2015-01-09 Jean Bréfort <jean.brefort@normalesup.org>
* programs/3d/gchem3d.appdata.xml.in: fixed typos.
* programs/calc/gchemcalc.appdata.xml.in: ditto.
* programs/crystal/gcrystal.appdata.xml.in: ditto.
* programs/paint/gchempaint.appdata.xml.in: ditto.
* programs/spectra/gspectrum.appdata.xml.in: ditto.
* programs/table/gchemtable.appdata.xml.in: ditto.
2014-10-26 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/widgetdata.cc: fix an object bounds evaluation issue.
* libs/gcp/widgetdata.h: ditto.
2014-09-22 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: accept the npapi-sdk package to build the mozilla plugin.
2014-08-31 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.14.10).
2014-08-30 Jean Bréfort <jean.brefort@normalesup.org>
* docs/reference/Makefile.am: fix make clean for recent doxygen.
* programs/3d/Makefile.am: fix distribution of appdata files.
* programs/calc/Makefile.am: ditto.
* programs/crystal/Makefile.am: ditto.
* programs/paint/Makefile.am: ditto.
* programs/spectra/Makefile.am: ditto.
* programs/table/Makefile.am: ditto.
2014-08-30 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/glview.cc: fix rotation. [#42977] (patch from Toni Andjelkovic)
* libs/gcu/glview.h: ditto.
* libs/gcugtk/glview.cc: ditto.
* libs/gcugtk/glview.h: ditto.
2014-08-29 Jean Bréfort <jean.brefort@normalesup.org>
* programs/3d/Makefile.am: add appdata files for every program.
* programs/3d/gchem3d.appdata.xml.in: ditto.
* programs/calc/Makefile.am: ditto.
* programs/calc/gchemcalc.appdata.xml.in: ditto.
* programs/crystal/Makefile.am: ditto.
* programs/crystal/gcrystal.appdata.xml.in: ditto.
* programs/spectra/Makefile.am: ditto.
* programs/spectra/gspectrum.appdata.xml.in: ditto.
* programs/table/Makefile.am: ditto.
* programs/table/gchemtable.appdata.xml.in: ditto.
2014-08-28 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/document.cc: ensure that the document size is always updated.
[#43091]
* libs/gcp/operation.cc: ditto.
* libs/gcp/view.cc: ditto.
* programs/paint/gchempaint.appdata.xml.in: update license data.
2014-08-07 Jean Bréfort <jean.brefort@normalesup.org>
* programs/paint/Makefile.am: add an appdata file for GChemPaint.
* programs/paint/gchempaint.appdata.xml.in: ditto.
2014-05-08 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.14.9).
2014-04-10 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/item.cc: fix initialization issues.
* libs/gccv/leaf.cc: ditto.
* libs/gccv/polygon.cc: ditto.
* libs/gccv/squiggle.cc: ditto.
2014-03-26 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/fragment.cc: don't set an Id to the residue, AddChild will do
the job.
* libs/gcu/object.cc: do not cache Id translations when not done with an
explicit SetId();
2014-03-25 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/bond.cc: don't crash if an atom is missing when evaluating
angles.
* libs/gcp/molecule.cc: correctly checks connectivity for molecules having
fragments.
* libs/gcp/view.cc: fix update when deleting a partial selection inside a
group.
* libs/gcu/bond.cc: don't crash if an atom is missing when evaluating
angles.
2014-03-24 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: fix tool buttons appearance for Gtk+-3.0 >= 3.10.
2014-02-24 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/canvas.cc: fix drawing area with gtk3 >= 3.10.
2014-02-15 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.14.8).
2014-02-15 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: version bump (0.14.7).
2014-02-14 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/molecule.cc: always use the correct application to load residues.
* libs/gcu/application.cc: don't use a NULL command context.
* libs/gcu/application.h: tupo.
* libs/gcugtk/application.cc: add a static GetDefaultApplication() method.
* libs/gcugtk/application.h: ditto.
* libs/gcugtk/cmd-context-gtk.h: ensure that class Application is declared.
* mozilla-plugin/chem-viewer.cc: load radii for 3Dmolecules.
2014-02-12 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/grid.cc: fixed crash with recent Gtk+.
2014-01-18 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/view.cc: do not try to export a transparent image to .bmp (also
fix pasting into LO).
* libs/gcp/view.h: ditto.
* libs/gcp/widgetdata.cc: ditto.
2014-01-18 Jean Bréfort <jean.brefort@normalesup.org>
* mozilla-plugin/moz-plugin.c: fixed supported mime-types list. (see
Debian bug #716961)
2014-01-17 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/line.cc: fixed test order. [#41261]
* libs/gcugtk/chem3dapplication.cc: avoid empty entries in recent list.
* libs/gcugtk/spectrumdoc.cc: don't access unititialized data.
* programs/spectra/application.cc: fixed double free issue.
2014-01-17 Koop Mast
* libs/gcu/application.cc: fix build on FreeBSD. [#41256]
* libs/gcugtk/spectrumdoc.cc: ditto.
2014-01-16 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: restore .mol files support.
* plugins/loaders/cml/cml.cc: fixed CML import.
2014-01-14 Jean Bréfort <jean.brefort@normalesup.org>
* templates/paint/templates.xml.in: fixed guanine structure.
2014-01-04 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: version bump (0.14.6).
* libs/gcp/document.cc: don'ts set the application active document to NULL
when destroying an inactive document.
2013-12-14 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: version bump (0.14.5).
2013-12-14 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/templates/templatetool.cc: make adding template work again.
2013-11-15 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: version bump (0.14.4).
2013-10-07 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/fragment.cc: do not use a NULL atom properties. [#40194]
2013-09-14 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/window.cc: really close the window on delete event.
* libs/gcu/chemistry.cc: fix locale use to avoid a crash is setlocale()
returns NULL.
* libs/gcu/macros.h: fix compiler warning.
* plugins/paint/selection/groupdlg.cc: don't crash when aligning ungrouped
objects.
2013-05-27 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/cycle.h: API docs fixes.
* libs/gcugtk/message.h: ditto.
* libs/gcugtk/printable.h: ditto.
* programs/table/gchemtable-curve.cc: fixed graph properties after edition.
* programs/table/gchemtable-data.cc: don't crash when using masses.
2013-05-10 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/loader-error.h: add missing header.
2013-03-15 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bmp (0.14.3)
2013-03-14 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bmp (0.14.2)
* libs/gcp/molecule.cc: fix crash when loading some molecules (was
introduced in 0.14.1).
2013-03-05 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/document.cc: don't crash when deleting a cyclic bond.
2013-03-02 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: enhance the choice of a stereobond from known parity.
* libs/gcp/molecule.cc: ditto.
* libs/gcu/chain.cc: new GetFirstAtom().
* libs/gcu/chain.h: ditto.
* libs/gcu/cycle.cc: Evaluates inter-cycle bridge length.
* libs/gcu/cycle.h: ditto.
2013-02-27 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/mesomery.cc: remove extra white space.
* libs/gcp/molecule.cc: checl molecule consistency while loading, avoids
a stack overflow.
2013-02-26 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/mesomer.cc: don't crash when a mesomery inside a reaction is
destroyed.
* libs/gcp/mesomery.cc: ditto.
* libs/gcp/reactant.cc: ditto.
* libs/gcp/reaction-step.cc: ditto.
2013-02-25 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/reaction-step.cc: fix crash when deleting a reactant using the
lasso tool.
2013-02-24 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/grid.cc: change row before emitting the row changed signal.
2013-01-21 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/mechanism-step.cc: do not destroy in NotifyEmpty () when empty
and not standalone.
* libs/gcp/mesomery.cc: do not allow destruction when inside a reaction.
2012-12-19 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.14.1).
2012-12-15 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: requires goffice-0.10 >= 0.10.0, bump version to 0.14.0.
2012-12-04 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: fix non bonding electon pairs in anions.
2012-12-02 Jean Bréfort <jean.brefort@normalesup.org>
* README: update goffice version.
* libs/gcp/application.cc: allow arrows outside of reaction or mesomery.
* plugins/paint/selection/selectiontool.cc: fix reaction construction.
2012-11-31 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: update version to 0.13.99.
2012-11-30 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/selection/groupdlg.cc: fixed gcrash when ungrouping.
2012-11-30 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: fixed rules for mesomery.
* plugins/paint/selection/selectiontool.cc: fixed mesomery construction.
2012-11-14 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/selection/group.cc: don't crash when loading a group.
2012-11-09 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/poly-line.cc: don't access invalid memory.
* libs/gcp/application.cc: allow a mesomery inside a reaction.
* libs/gcp/brackets.cc: allow brackets around a mesomery.
* libs/gcp/mesomery.cc: ditto.
* libs/gcp/reaction.cc: allow a mesomery inside a reaction.
* plugins/paint/selection/bracketstool.cc: fixed an uninitialized data
issue.
2012-10-27 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/bond.cc: fix squiggle bonds period.
* plugins/paint/bonds/bondtool.cc: ditto.
2012-10-04 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: removed unimplemented CTFiles plugin.
* plugins/loaders/Makefile.am: ditto.
* plugins/loaders/ctfiles/Makefile.am: ditto.
* plugins/loaders/ctfiles/ctfiles.cc: ditto.
* plugins/loaders/ctfiles/plugin.xml.in: ditto.
2012-09-30 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/text/texttool.cc: don't use deprecated goffice function.
2012-09-29 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: update version to 0.13.98 (0.14 beta 1).
* docs/help/C/paint/C/gchempaint.xml: updated user doc for 0.14.
2012-09-25 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/text/fontsel.ui: fixed layout.
2012-09-16 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: fixed implicit lone pairs count evaluation.
* libs/gcp/brackets.cc: fixed stoichiometry child position.
* libs/gcp/brackets.h: ditto.
* libs/gcp/text.cc: avoid crash if an Item is absent.
* libs/gcu/document.cc: use existing objects when loading.
* libs/gcugtk/gcuperiodic.c (gcu_periodic_init): don't use deprecated API.
* libs/gcugtk/ui-builder.cc: ditto.
2012-09-09 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/document.cc: enhance undo/redo system.
* libs/gcu/bond.cc: use existing atoms when loading.
* libs/gcu/document.cc: cleaned Id translation issues.
* libs/gcu/document.h: ditto.
* libs/gcu/object.cc: ditto.
* plugins/paint/selection/lassotool.cc: fixed undo flip.
2012-09-08 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/selection/bracketstool.cc: don't crash when selecting a
fragment.
2012-09-02 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: checks for GL/glu.h.
* plugins/paint/bonds/newman.cc: properly initialize the bond order.
* plugins/paint/bonds/newman.h: add the missing help tag.
* plugins/paint/selection/selectiontool.cc: fixed a freeze.
2012-08-12 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.13.93).
2012-08-11 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/spectra/C/gspectrum.xml: update GCrystal user documentation.
* libs/gcr/atomsdlg.cc: apply element change to all selected atoms.
* ui/crystal/atoms.ui: fixed needed Gtk+ version.
* ui/crystal/bonds.ui: ditto.
* ui/crystal/cell.ui: ditto.
* ui/crystal/cleavages.ui: ditto.
* ui/crystal/docprop.ui: ditto.
* ui/crystal/lines.ui: ditto.
* ui/crystal/prefs.ui: ditto.
* ui/crystal/size.ui: ditto.
* ui/crystal/view-settings.ui: ditto.
2012-08-06 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/mesomery-arrow.cc: do not save inside a dummy object.
* libs/gcp/reaction-arrow.cc: ditto.
* libs/gcu/object.cc: fix loading. [#37032]
* libs/gcugtk/cmd-context-gtk.cc: fix crasher.
* plugins/paint/arrows/retrosynthesisarrow.cc: do not save inside a dummy
object.
2012-08-01 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/spectra/C/gspectrum.xml: updated user doc for 0.14.
* libs/gcugtk/spectrumdoc.cc: add "response factor" as unit, widgets
spacing,and support non UTF-8 titles.
* libs/gcugtk/spectrumdoc.h: ditto.
* libs/gcugtk/spectrumview.cc: fix widgets spacing.
2012-07-23 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: remove old gconf related code.
* gnumeric/functions.cc: call gcu::Element::Init().
* goffice/gchemutils.cc: ditto.
* libs/gcu/element.cc: add Greek language.
* mozilla-plugin/chem-viewer.cc: call gcu::Element::Init().
2012-07-13 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/C/table/C/gchemtable.xml: updated user doc for 0.14.
2012-07-15 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.13.92).
* docs/help/C/calc/C/figures/*: updated screenshots.
* libs/gcp/application.cc: fixed a misleading error message.
* libs/gcp/view.cc: fix View::BuildSVG() and View::BuildEPS() which were
missing the trailing 0.
2012-07-13 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/C/3d/C/gchem3d.xml: updated user doc for 0.14.
* libs/gcp/window.cc: force a message box to be modal.
* libs/gcugtk/message.cc: make the message box modal when Run() is called.
2012-07-11 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.13.91).
* libs/gcp/application.cc: fixed theme issues in toolbox.
* libs/gcp/window.cc: fix menu item label.
* libs/gcu/atom.cc: fix crasher on exit.
* libs/gcu/bond.cc: ditto.
* libs/gcu/element.cc: fix localization.
* libs/gcu/element.h: ditto.
* libs/gcugtk/chem3dapplication.cc: always show the tools menu items when
a molecule has been loaded.
* libs/gcugtk/chem3dwindow.cc: fix menu item label.
* programs/3d/main.cc: fix localization.
* programs/calc/gchemcalc.cc: ditto.
* programs/crystal/main.cc: ditto.
* programs/paint/main.cc: ditto.
* programs/spectra/Makefile.am: ditto.
* programs/spectra/gspectrum.cc: ditto.
2012-07-09 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/atomsdlg.cc: fixed radius changes behavior.
2012-07-08 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/element.cc: don't load data before main execution, fixes a weird
localization issue.
* programs/table/Makefile.am: ditto.
* programs/table/gchemtable-app.cc: ditto.
* programs/table/gchemtable-main.cc: ditto.
2012-06-28 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: add -Werror=format-security to CFLAGS.
* docs/reference/Makefile.am: add missing files.
* libs/gcp/application.cc: fixed errors by -Werror=format-security.
* libs/gcp/window.cc: ditto.
* libs/gcr/grid.cc: ditto.
* libs/gcugtk/chem3dapplication.cc: ditto.
* libs/gcugtk/chem3dwindow.cc: ditto.
* libs/gcugtk/glview.cc: ditto.
* libs/gcugtk/message.cc: ditto.
* libs/gcugtk/message.h: ditto.
* libs/gcugtk/stringdlg.cc: ditto.
* plugins/paint/residues/residues-dlg.cc: ditto.
* plugins/paint/selection/selectiontool.cc: ditto.
* plugins/paint/templates/templatetool.cc: ditto.
* programs/calc/gchemcalc.cc: ditto.
* programs/spectra/application.cc: ditto.
* programs/table/gchemtable-app.cc: ditto.
2012-06-11 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/application.cc: allow pdb files in gcrystal.
* libs/gcr/document.cc: fix infinite loop condition. [#36583]
* libs/gcu/application.cc: typo.
2012-06-10 Jean Bréfort <jean.brefort@normalesup.org>
* docs/man/gchem3d.1: change license to GFDL-1.3+
* docs/man/gchemcalc.1: ditto.
* docs/man/gchempaint.1: ditto.
* docs/man/gchemtable.1: ditto.
* docs/man/gcrystal.1: ditto.
* docs/man/gspectrum.1: ditto.
* libs/gcr/atom.cc: move some code to gcu.
* libs/gcr/atom.h: ditto.
* libs/gcu/atom.cc: fix import from pdb files. [#36582]
* libs/gcu/atom.h: ditto.
* libs/gcu/chem3ddoc.cc: ditto.
* libs/gcu/chem3ddoc.h: ditto.
* libs/gcu/molecule.cc: ditto.
* libs/gcu/molecule.h: ditto.
2012-06-03 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/loaders/cml/cml.cc: don't free a static string. [#36582]
2012-05-20 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.13.90).
* database/elements.xml.in: added flerovium and livermorium.
* ui/libgcu/gcuperiodic.ui: ditto.
2012-04-20 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/document.h: API documentation.
* libs/gcr/gcrcrystalviewer.h: ditto.
* libs/gcr/grid.cc: ditto.
* libs/gcr/grid.h: ditto.
* libs/gcr/line.h: ditto.
* libs/gcr/prefs.h: ditto.
* libs/gcr/view-settings.h: ditto.
* libs/gcr/view.h: ditto.
* libs/gcr/window.h: ditto.
* libs/gcu/macros.h: ditto.
2012-04-15 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/application.h: API documentation.
* libs/gcr/atomsdlg.cc: ditto.
* libs/gcr/atomsdlg.h: ditto.
* libs/gcr/celldlg.h: ditto.
* libs/gcr/cleavagesdlg.h: ditto.
* libs/gcr/docprop.h: ditto.
* libs/gcr/document.h: ditto.
* libs/gcr/linesdlg.h: ditto.
* libs/gcr/sizedlg.h: ditto.
* libs/gcu/application.h: ditto.
* plugins/loaders/nuts/nuts.cc: fix build on big endian machines (patch
from Dan Horak). [#36175]
2012-04-10 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.h: API documentation and cleaning.
* libs/gcp/brackets.h: ditto.
* libs/gcp/docprop.h: ditto.
* libs/gcp/document.h: ditto.
* libs/gcp/molecule.h: ditto.
* libs/gcp/newfiledlg.h: ditto.
* libs/gcp/reaction-arrow.h: ditto.
* libs/gcp/residue.h: ditto.
* libs/gcp/scheme.h: ditto.
* libs/gcp/text-object.h: ditto.
* libs/gcp/text.h: ditto.
* libs/gcp/view.h: ditto.
* libs/gcp/widgetdata.h: ditto.
* libs/gcugtk/cmd-context-gtk.h: ditto.
* libs/gcugtk/printable.h: ditto.
* libs/gcugtk/spectrumview.h: ditto.
2012-03-29 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: request GPL-v3 goffice and libspreadsheet versions.
* openbabel/COPYING: add missing.
2012-03-28 Jean Bréfort <jean.brefort@normalesup.org>
* all files: Changed version from GPL-v2+ to GPL-v3+ except for the
Openbabel server.
2012-03-27 Jean Bréfort <jean.brefort@normalesup.org>
* database/space-groups.xml.in: add some large cell variants for groups
#1 and #2.
* libs/gcp/brackets.h: API docs.
* libs/gcu/spacegroup.cc: typo.
* plugins/loaders/cif/cif.cc: load space groups with
_space_group_symop_operation_xyz fields.
2012-03-19 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.h: API docs.
* libs/gcp/arrow.h: ditto.
* libs/gcp/atom.cc: ditto.
* libs/gcp/atom.h: ditto.
* programs/table/gchemtable-curve.cc: really fixed URI opening.
2012-03-17 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/window.cc: fixed URI opening.
* libs/gcr/window.cc: ditto.
* libs/gcu/application.cc: moved URI opening to gcugtk for now after
go_url_show removal and the need for a GdkScreen.
* libs/gcu/application.h: ditto.
* libs/gcugtk/application.cc: ditto.
* libs/gcugtk/application.h: ditto.
* libs/gcugtk/chem3dwindow.cc: fixed URI opening.
* libs/gcugtk/molecule.cc: ditto.
* libs/gcugtk/window.h: add a GetScreen method for convenience.
* programs/calc/gchemcalc.cc: fixed URI opening.
* programs/spectra/window.cc: ditto.
* programs/table/gchemtable-app.cc: ditto.
2012-02-26 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/mechanism-step.cc: fixed a crasher [#35626] and allow a choice
of a molecule for alignment when the step has more than one.
* libs/gcp/mechanism-step.h:ditto.
2012-02-24 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post-release version bump (0.13.7).
* libs/gcp/bond.cc: fixed crash on molecules loading.
2012-02-20 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcugtk/gcuperiodic.h: more API docs update.
* libs/gcugtk/message.h: ditto.
* libs/gcugtk/molecule.h: ditto.
* libs/gcugtk/print-setup-dlg.cc: ditto.
* libs/gcugtk/print-setup-dlg.h: ditto.
* libs/gcugtk/printable.h: ditto.
* libs/gcugtk/spectrumdoc.h: ditto.
* libs/gcugtk/spectrumview.h: ditto.
* libs/gcugtk/stringinputdlg.h: ditto.
* libs/gcugtk/ui-manager.h: ditto.
2012-02-16 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/reaction.cc: more API docs update.
* libs/gcu/molecule.h: ditto.
* libs/gcu/residue.h: ditto.
* libs/gcugtk/chem3dapplication.h: ditto.
* libs/gcugtk/chem3ddoc.h: ditto.
* libs/gcugtk/chem3dview.h: ditto.
* libs/gcugtk/chem3dwindow.h: ditto.
* libs/gcugtk/cmd-context-gtk.h: ditto.
* libs/gcugtk/dialog.h: ditto.
* plugins/loaders/cdx/cdx.cc: ditto.
* plugins/paint/selection/bracketstool.cc: ditto.
2012-02-14 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/glview.h: more API docs update.
* libs/gcu/molecule.h: ditto.
* libs/gcu/objprops.h: ditto.
* libs/gcu/ui-manager.h: ditto.
* libs/gcugtk/window.h: ditto.
2012-02-13 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/application.h: more API docs update.
* libs/gcu/application.h: ditto.
* libs/gcu/atom.h: ditto.
* libs/gcu/bond.h: ditto.
* libs/gcu/chain.h: ditto.
* libs/gcu/chem3ddoc.h: ditto.
* libs/gcu/cmd-context.h: ditto.
* libs/gcu/cylinder.h: ditto.
* libs/gcu/dialog.h: ditto.
* libs/gcu/document.h: ditto.
* libs/gcu/element.h: ditto.
* libs/gcugtk/application.h: ditto.
2012-02-07 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/element.cc: fixed a memory leak.
2012-02-01 Jean Bréfort <jean.brefort@normalesup.org>
* docs/reference/Doxyfile.in: more API docs update.
* libs/gccv/brackets.h: ditto.
* libs/gcp/step.h: ditto.
* libs/gcu/application.h: ditto.
* libs/gcu/chem3ddoc.h: ditto.
* libs/gcu/chemistry.h: ditto.
* libs/gcu/spacegroup.h: ditto.
* libs/gcugtk/application.h: ditto.
* libs/gcugtk/chem3dapplication.h: ditto.
* libs/gcugtk/filechooser.h: ditto.
* libs/gcugtk/gcuchem3dviewer.h: ditto.
* libs/gcugtk/gcucomboperiodic.h: ditto.
* libs/gcugtk/gcuperiodic.c: ditto.
* libs/gcugtk/gcuperiodic.h: ditto.
* libs/gcugtk/gcuspectrumviewer.h: ditto.
* libs/gcugtk/print-setup-dlg.h: ditto.
* libs/gcugtk/printable.h: ditto.
* libs/gcugtk/spectrumdoc.h: ditto.
* libs/gcugtk/spectrumview.h: ditto.
2012-01-29 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/brackets.h: update API docs.
* libs/gccv/line-item.h: ditto.
* libs/gccv/wedge.h: ditto.
2012-01-28 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/arrow.cc: add a length property.
* libs/gcp/arrow.h: ditto.
* libs/gcp/reaction.cc: don't crash on missing step.
2012-01-12 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/bond.cc: don't crash when a Newman bond has no radius.
* tests/testgcuperiodic.c (main): make it build with gtk+-3.2.
2012-01-11 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/bond.cc: fixed Newman bond radius when bond length changes.
* plugins/paint/bonds/newman.cc: make property page work.
* plugins/paint/bonds/newman.h: ditto.
* plugins/paint/bonds/newman.ui: ditto.
2012-01-10 Jean Bréfort <jean.brefort@normalesup.org>
* pixmaps/Makefile.am: restore mime types related pixmaps installation.
2012-01-06 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/poly-line.cc: use auto color when needed.
* libs/gcp/atom.cc: fixed a bonds crossing issue.
* libs/gcp/atom.h: ditto.
* libs/gcp/bond.cc: ditto.
* libs/gcp/bond.h: ditto.
* libs/gcp/fragment-residue.cc: when changing residue, update the symbol.
* libs/gcp/fragment-residue.h: ditto.
* libs/gcp/fragment.cc: ditto.
* libs/gcp/reaction.cc: better building, not perfect yet.
* plugins/paint/bonds/Makefile.am: new Newman projection tool.
* plugins/paint/bonds/newman.cc: ditto.
* plugins/paint/bonds/newman.h: ditto.
* plugins/paint/bonds/newman.ui: ditto.
* plugins/paint/bonds/plugin.cc: ditto.
2011-12-22 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/molecule.cc: fixed loading of crossing bonds.
2011-12-20 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/Makefile.am: add scheme.[cc,h].
* libs/gcp/arrow.cc: add steps.
* libs/gcp/arrow.h: ditto.
* libs/gcp/reaction-arrow.cc: move steps to base class.
* libs/gcp/reaction-arrow.h: ditto.
* libs/gcp/reaction-step.cc: move arrows management to parent class.
* libs/gcp/reaction-step.h: ditto.
* libs/gcp/reaction.cc: make Reaction derive from Scheme.
* libs/gcp/reaction.h: ditto.
* libs/gcp/scheme.cc: new parent class for reactions and more. Manage
alignment for any number of arrows.
* libs/gcp/scheme.h: ditto.
* libs/gcp/step.cc: add arrows management.
* libs/gcp/step.h: ditto.
2011-12-18 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/Makefile.am: add new files.
* libs/gcp/mechanism-step.cc: derives from Step.
* libs/gcp/mechanism-step.h: ditto.
* libs/gcp/mesomery.cc: removed obsolete comments.
* libs/gcp/reaction-step.cc: add a Validate() method.
* libs/gcp/reaction-step.h: ditto.
* libs/gcp/reaction.cc: add some more checks when building a reaction.
* libs/gcp/reaction.h: ditto.
* libs/gcp/step.cc: new parent class for various steps between arrows.
* libs/gcp/step.h: ditto.
* libs/gcr/atomsdlg.cc: fixed crashes.
* libs/gcr/celldlg.cc: ditto.
* libs/gcr/grid.cc: ditto.
* libs/gcu/atom.cc: ditto.
2011-12-17 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gchemutils.cc: restore app selection when the mime type is set.
* libs/gcp/reaction.cc: some progress on multistep reactions.
2011-12-10 Jean Bréfort <jean.brefort@normalesup.org>
* database/space-groups.xml.in: fixed two groups identifiers.
* libs/gcu/spacegroup.cc: separate HM name from coordinate alternative.
* libs/gcu/spacegroup.h: ditto.
2011-11-30 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/text.cc: fixed rise position serialization. [#34947]
2011-11-28 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: fixed build with ->l,--no-undefined. [patch #7677]
* goffice/Makefile.am: ditto.
* libs/gcp/application.cc: allow text as reactant.
* libs/gcr/Makefile.am: fixed build with ->l,--no-undefined.
* libs/gcu/Makefile.am: ditto.
* libs/gcu/application.cc: ditto.
* libs/gcu/application.h: ditto.
* libs/gcugtk/Makefile.am: ditto.
* libs/gcugtk/application.cc: ditto.
* libs/gcugtk/application.h: ditto.
* pixmaps/Makefile.am: ditto.
* plugins/loaders/cdxml/cdxml.cc: ditto.
* plugins/paint/arrows/Makefile.am: ditto.
* plugins/paint/atoms/Makefile.am: ditto.
* plugins/paint/bonds/Makefile.am: ditto.
* plugins/paint/cycles/Makefile.am: ditto.
* plugins/paint/residues/Makefile.am: ditto.
* plugins/paint/selection/Makefile.am: ditto.
* plugins/paint/templates/Makefile.am: ditto.
* plugins/paint/text/Makefile.am: ditto.
* programs/3d/document.cc: fixed build with most recent glib.
* programs/spectra/document.cc: ditto.
2011-11-27 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gchemutils-priv.h: make support for 3d molecules.
* goffice/gchemutils.cc: ditto.
* goffice/gogchem3dapp.cc: ditto.
* goffice/gogchem3dwin.cc: ditto.
* goffice/gogchem3dwin.h: ditto.
2011-11-22 Jean Bréfort <jean.brefort@normalesup.org>
* gnumeric/functions.cc: remove extra white space in function help.
* libs/gcp/document.cc: don't access a NULL object on pasting.
* libs/gcu/chem3ddoc.cc: always ensure the view distance is valid.
* libs/gcu/chem3ddoc.h: ditto.
* libs/gcu/gldocument.cc: ditto.
* libs/gcu/macros.h: new GCU_PROP_EX macro.
2011-11-21 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gchemutils.cc: use a better property name.
* goffice/gogchem3dapp.cc: fix size on loading.
* goffice/gogcrystalapp.cc: no need to change the content type for a
CIF file if we don't treat any error.
2011-11-20 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcugtk/spectrumview.cc: fixed build with gtk+-3.2.
2011-11-19 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/arrows/org.gnome.gchemutils.paint.plugins.arrows.gs
chema.xml.in.in: fixed paths.
* schemas/org.gnome.gchemutils.crystal.gschema.xml.in.in: ditto.
* schemas/org.gnome.gchemutils.gschema.xml.in.in: ditto.
* schemas/org.gnome.gchemutils.paint.gschema.xml.in.in: ditto.
2011-11-18 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/selection/group.cc: make Group derive from DialogOwner
so that its property box can be non modal.
* plugins/paint/selection/group.h: ditto.
* plugins/paint/selection/groupdlg.cc: the dialog can now belong to the
group if any.
* plugins/paint/selection/selectiontool.cc: ensure we don't open two group
dialogs at once.
2011-11-17 Jean Bréfort <jean.brefort@normalesup.org>
* COPYING-DOCS: updated to GFDL 1.3.
* docs/help/*/C/legal.xml: ditto.
* plugins/paint/selection/group.ui: fixed alignment and group dialog.
* plugins/paint/selection/groupdlg.cc: ditto.
2011-11-15 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gogchem3dapp.cc: add a nil pointer to the documents list to
avoid an unwanted call to gtk_main_quit().
2011-11-14 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gogchem3dapp.cc: 3d viewer starts working inside goffice
component.
* libs/gcu/chem3ddoc.cc: ditto.
* libs/gcu/chem3ddoc.h: ditto.
* libs/gcugtk/chem3ddoc.cc: ditto.
* libs/gcugtk/glview.cc: ditto.
2011-11-12 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.13.6).
2011-11-11 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: really fix mozilla plugin build.
* mozilla-plugin/moz-plugin.c: ditto.
2011-11-11 Jean Bréfort <jean.brefort@normalesup.org>
* Makefile.am: drop GConf support.
* gchemutils.schemas.in: ditto.
* plugins/paint/arrows/Makefile.am: ditto.
* plugins/paint/arrows/gchempaint-arrows.schemas.in: ditto.
* programs/crystal/Makefile.am: ditto.
* programs/crystal/gcrystal.schemas.in: ditto.
* programs/paint/Makefile.am: ditto.
* programs/paint/gchempaint.schemas.in: ditto.
2011-11-09 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gchemutils.cc: add support for CIF files.
* goffice/gogcrystalapp.cc: ditto.
* libs/gcr/atom.cc: serialize effective radius ratio.
* libs/gcr/document.cc: fix crasher.
* libs/gcr/document.h: remove local dialogs list.
* libs/gcu/spacegroup.cc: don't add too many atoms.
2011-11-07 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gchemutils-priv.h: enhance content type support.
* goffice/gchemutils.cc: ditto.
* goffice/gogchem3dapp.h: ditto.
* goffice/gogcpapp.h: ditto.
* goffice/gogcrystalapp.h: ditto.
* goffice/gogcuapp.h: ditto.
2011-11-06 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/Makefile.am: add a window class for 3d views.
* goffice/gogchem3dapp.cc: implement load data.
* goffice/gogchem3dapp.h: fixed class declaration.
* goffice/gogchem3dwin.cc: add a window class for 3d views.
* goffice/gogchem3dwin.h: ditto.
* goffice/plugin.xml.in: support chemical/x-xyz at the print level.
2011-11-05 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gogcrystalapp.cc: fixed various issues in component.
* libs/gcr/application.cc: ditto.
* libs/gcr/document.cc: ditto.
2011-11-04 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gchemutils.cc: don't duplicate applications.
* libs/gcu/chem3ddoc.cc: moved string to/from display mode here.
* libs/gcu/chem3ddoc.h: ditto.
* libs/gcugtk/chem3dwindow.cc: more work for the goffice plugin.
* libs/gcugtk/chem3dwindow.h: ditto.
* programs/3d/main.cc: moved string to/from display mode to gcu library.
* programs/3d/window.cc: ensure Quit menu item presence.
2011-11-02 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/Makefile.am: start working on 3d viewer support in the goffice
component.
* goffice/gchemutils-priv.h: ditto.
* goffice/gchemutils.cc: ditto.
* goffice/gogchem3dapp.cc: ditto.
* goffice/gogchem3dapp.h: ditto.
* libs/gcu/structs.h: ditto.
* libs/gcugtk/Makefile.am: ditto.
* libs/gcugtk/chem3dapplication.cc: ditto.
* libs/gcugtk/chem3dapplication.h: ditto.
* libs/gcugtk/chem3dview.cc: ditto.
* libs/gcugtk/chem3dview.h: ditto.
* libs/gcugtk/chem3dwindow.cc: ditto.
* libs/gcugtk/chem3dwindow.h: ditto.
* programs/3d/application.cc: ditto.
* programs/3d/application.h: ditto.
* programs/3d/document.cc: ditto.
* programs/3d/main.cc: ditto.
* programs/3d/view.cc: ditto.
* programs/3d/view.h: ditto.
* programs/3d/window.cc: ditto.
* programs/3d/window.h: ditto.
2011-11-01 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gchemutils.cc: make gcrystal files support in component work, and
ensure that gcrystal still works.
* goffice/gogcpapp.cc: ditto.
* goffice/gogcpapp.h: ditto.
* goffice/gogcrystalapp.cc: ditto.
* goffice/gogcrystalapp.h: ditto.
* goffice/gogcrystalwin.cc: ditto.
* goffice/gogcrystalwin.h: ditto.
* goffice/gogcuapp.h: ditto.
* libs/gcr/application.cc: ditto.
* libs/gcr/application.h: ditto.
* libs/gcr/document.cc: ditto.
* libs/gcr/window.cc: ditto.
* programs/crystal/application.cc: ditto.
* programs/crystal/window.cc: ditto.
2011-10-31 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gchemutils.cc: more work on gcrystal files support in component.
* goffice/gogcrystalapp.cc: ditto.
* goffice/gogcrystalapp.h: ditto.
* goffice/gogcrystalwin.cc: ditto.
* libs/gcr/window.cc: ditto.
* libs/gcr/window.h: ditto.
* libs/gcp/window.h: white space issue.
2011-10-30 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcugtk/glview.cc: fixed an off-screen rendering issue.
* all others: moved code from programs/crystal to libs/gcr to prepare
for crystal models support in the goffice plugin.
2011-10-29 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gchemutils.cc: make it build with most recent goffice.
* libs/gcp/reaction-arrow.cc: start work on multi-step reaction schemes.
* libs/gcp/reaction-arrow.h: ditto.
* libs/gcp/reaction.cc: ditto.
* libs/gcugtk/glview.cc: make BuildPixbuf work even if the widget is not
realized.
2011-10-28 Jean Bréfort <jean.brefort@normalesup.org>
* acinclude.m4: removed DOLT support.
* configure.ac: ditto.
* *.cc: made GtkGrid spacing compatible with gtk+-3.2.
* *.ui: ditto.
2011-10-27 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/glview.cc: fixed after a Goffice API break.
* libs/gcu/molecule.cc: implement GetRawFormula().
* libs/gcu/molecule.h: ditto.
* libs/gcugtk/glview.cc: fixed a GL related crash.
* plugins/loaders/cif/cif.cc: really only load the first struture from
the file.
* programs/3d/window.cc: implement export to GChemCalc.
2011-10-26 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/window.cc: make import from InChI and SMILES available in the
3d viewer.
* libs/gcu/chem3ddoc.cc: ditto.
* libs/gcu/chem3ddoc.h: ditto.
* libs/gcugtk/Makefile.am: ditto.
* libs/gcugtk/stringdlg.cc: ditto.
* libs/gcugtk/stringinputdlg.cc: ditto.
* libs/gcugtk/stringinputdlg.h: ditto.
* programs/3d/document.cc: ditto.
* programs/3d/window.cc: ditto.
* ui/libgcu/Makefile.am: ditto.
* ui/libgcu/stringinputdlg.ui: ditto.
* ui/paint/Makefile.am: ditto.
* ui/paint/stringinputdlg.ui: ditto.
2011-10-25 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/molecule.cc: make database support available for the 3d viewer.
* libs/gcugtk/Makefile.am: ditto.
* libs/gcugtk/molecule.cc: ditto.
* libs/gcugtk/molecule.h: ditto.
* programs/3d/document.cc: ditto.
* programs/3d/window.cc: ditto.
* programs/3d/window.h: ditto.
2011-10-24 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gchemutils-priv.h: moved the gtk related gcu::Window code
to gtkgcu.
* libs/gcp/Makefile.am: moved the StringDlg class to gcugtk.
* libs/gcp/application.cc: ditto.
* libs/gcp/application.h: ditto.
* libs/gcp/docprop.cc: ditto.
* libs/gcp/document.cc: ditto.
* libs/gcp/document.h: ditto.
* libs/gcp/fragment.cc: ditto.
* libs/gcp/molecule.cc: ditto.
* libs/gcp/molecule.h: ditto.
* libs/gcp/stringdlg.cc: ditto.
* libs/gcp/stringdlg.h: ditto.
* libs/gcp/target.cc: ditto.
* libs/gcp/target.h: ditto.
* libs/gcp/text-object.cc: ditto.
* libs/gcp/view.cc: ditto.
* libs/gcr/window.cc: moved the gtk related gcu::Window code
to gtkgcu.
* libs/gcr/window.h: ditto.
* libs/gcu/chem3ddoc.h: ditto.
* libs/gcu/document.h: ditto.
* libs/gcu/window.h: ditto.
* libs/gcugtk/Makefile.am: ditto.
* libs/gcugtk/application.h: ditto.
* libs/gcugtk/molecule.cc: ditto.
* libs/gcugtk/molecule.h: ditto.
* libs/gcugtk/stringdlg.cc: ditto.
* libs/gcugtk/stringdlg.h: ditto.
* libs/gcugtk/window.cc: ditto.
* libs/gcugtk/window.h: ditto.
* plugins/paint/selection/lassotool.cc: ditto.
* plugins/paint/selection/selectiontool.cc: ditto.
* plugins/paint/text/fragmenttool.cc: ditto.
* plugins/paint/text/texttool.cc: ditto.
* programs/3d/document.cc: ditto.
* programs/3d/document.h: ditto.
* programs/3d/window.cc: add export to GChemPaint and evaluation of InChI,
InChiKey and SMILES.
* programs/3d/window.h: ditto.
* ui/libgcu/Makefile.am: moved the StringDlg class to gcugtk.
* ui/paint/Makefile.am: ditto.
* ui/paint/stringdlg.ui: ditto.
2011-10-23 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text.cc: fixed an alignment issue.
* plugins/paint/text/texttool.cc: don't destroy a whole molecule when
removing just a bracket stoichiometry.
2011-10-22 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/brackets.cc: make stoechimetry survive serialization.
* libs/gcp/brackets.h: ditto.
* libs/gcp/text.cc: ditto.
2011-10-16 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text.cc: more work on brackets stoichimetry coefficient support.
* libs/gcp/brackets.cc: ditto.
* libs/gcp/text.cc: ditto.
* libs/gcp/window.cc: expand the contents widget.
* plugins/paint/text/texttool.cc: more work on brackets stoichimetry
coefficient support.
2011-10-15 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/text.cc: some progress on brackets stoichiometry coefficient.
* plugins/paint/text/texttool.cc: ditto.
* plugins/paint/text/texttool.h: ditto.
2011-09-09 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: fixed AM_MAINTAINER_MODE usage.
* libs/gcp/brackets.cc: attempt to add a global tag to decorative text.
* libs/gcp/text.cc: ditto.
* libs/gcp/text.h: ditto.
2011-08-31 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/brackets.cc: add a text field as stoichiometry.
* libs/gcugtk/cmd-context-gtk.cc: delete message box when done.
2011-08-30 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/bond.h: API doc typo.
* libs/gcp/brackets.cc: add a contextual menu.
* libs/gcp/brackets.h: ditto.
2011-08-29 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcugtk/spectrumdoc.cc: use markup in combo box and axis title.
* libs/gcugtk/spectrumview.cc: add two methods to sanitize custom option
widgets management.
* libs/gcugtk/spectrumview.h: ditto.
2011-08-28 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/atomsdlg.cc: apply radius and color changes to the whole
selection.
* libs/gcr/atomsdlg.h: ditto.
* libs/gcr/grid.cc: enhance keyboard navigation.
2011-08-27 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/atomsdlg.cc: remove obsolete "Apply to" button.
* libs/gcr/atomsdlg.h: ditto.
* libs/gcr/grid.cc: enhance keyboard navigation.
* libs/gcr/grid.h: ditto.
* ui/crystal/atoms.ui: remove obsolete "Apply to" button.
2011-08-23 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/grid.cc: enhance multiple selection handling.
* libs/gcr/grid.h: add gcr_grid_select_all().
* libs/gcr/linesdlg.cc: new "Select all" button.
* libs/gcugtk/ui-builder.cc: new GetObject() method.
* libs/gcugtk/ui-builder.h: ditto.
* ui/crystal/lines.ui: new "Select all" button.
2011-08-22 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/grid.cc: enhance mouse move selection and multiple selection.
* libs/gcr/grid.h: ditto.
* libs/gcr/linesdlg.cc: apply color and radius change to the whole
selection.
* libs/gcr/linesdlg.h: ditto.
2011-08-21 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/grid.cc: start work on multiple row selection.
* libs/gcr/grid.h: ditto.
* libs/gcr/linesdlg.cc: use multiple selection in grid.
2011-08-20 Jean Bréfort <jean.brefort@normalesup.org>
* pixmaps/Makefile.am: install svg icons for mime types as well.
* programs/crystal/view-settings.cc: make it instant apply.
* programs/crystal/view-settings.h: ditto.
* ui/crystal/view-settings.ui: ditto.
2011-08-16 Jean Bréfort <jean.brefort@normalesup.org>
* pixmaps/Makefile.am: install scalable icons instead of bitmaps.
* programs/crystal/prefs.cc: made it instant apply.
* programs/crystal/prefs.h: ditto.
* ui/crystal/docprop.ui: minor fix.
* ui/crystal/prefs.ui: made it instant apply.
2011-08-15 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/celldlg.cc: made it instant apply.
* libs/gcr/celldlg.h: ditto.
* pixmaps/gchem3d.svg: new svg icon, thanks to Matthias Mailänder.
* pixmaps/gchemcalc.svg: ditto.
* pixmaps/gchempaint.svg: ditto.
* pixmaps/gchemtable.svg: ditto.
* pixmaps/gcrystal.svg: ditto.
* pixmaps/gspectrum.svg: ditto.
2011-08-14 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.13.5).
* libs/gcr/celldlg.cc: start cell dialog reimplementation.
* libs/gcr/document.cc: ditto.
* programs/crystal/document.cc: ditto.
* ui/crystal/cell.ui: ditto.
2011-08-13 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: no more tar.gz package.
* libs/gcr/grid.cc: fixed decimal separator handling.
* libs/gcr/Makefile.am: fixed include path for generated header.
* libs/gcu/loader.cc: don't crash when using default application.
* mozilla-plugin/chem-viewer.cc: make it build.
* mozilla-plugin/moz-plugin.c: make it work with latest firefox.
* plugins/paint/atoms/plugin.cc: add missing fields.
2011-08-12 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/grid.cc: cleaned.
* libs/gcr/sizedlg.cc: make size dialog instant apply.
* libs/gcr/sizedlg.h: ditto.
* ui/crystal/size.ui: ditto.
2011-08-11 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/grid.cc: really support booleans.
* libs/gcr/line.h: make members more accessible.
* libs/gcr/linesdlg.cc: make it work.
* libs/gcr/linesdlg.h: ditto.
2011-08-10 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/line.cc: add new SetColor(GdkRGBA) method.
* libs/gcr/line.h: ditto.
* libs/gcr/linesdlg.cc: manage edges, diagonals and medians.
* libs/gcr/linesdlg.h: ditto.
2011-08-09 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/grid.cc: display a check box in boolean cells.
2011-08-07 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/atomsdlg.cc: removed old obsolete code.
* libs/gcr/line.cc: add new GetColor(GdkRGBA&) method.
* libs/gcr/line.h: ditto.
* libs/gcr/linesdlg.cc: populate the dialog with existing lines.
* libs/gcr/linesdlg.h: ditto.
2011-08-06 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/atomsdlg.cc: take target button selection into account when
radius scale changes.
* libs/gcr/linesdlg.cc: new display, doesn't work yet.
* libs/gcr/linesdlg.h: ditto.
* ui/crystal/lines.ui: ditto.
2011-08-05 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/atomsdlg.cc: check atom list and remove duplicates.
* libs/gcr/atomsdlg.h: ditto.
* libs/gcr/document.cc: ditto.
* libs/gcr/document.h: ditto.
* libs/gcr/linesdlg.cc: start work on the lines dialog.
* libs/gcr/linesdlg.h: ditto.
2011-08-04 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/atomsdlg.cc: manage radius.
2011-08-03 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/atomsdlg.cc: take radius scaling into account.
* libs/gcr/atomsdlg.h: ditto.
2011-08-02 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: fixed goffice and gnumeric API versions.
* libs/gcr/atomsdlg.cc: make color changes really work.
* libs/gcr/grid.cc: improve navigation, and implement delete ans backspace.
2011-08-01 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/atom.cc: add new GetColor(GdkRBGA&) method.
* libs/gcr/atom.h: ditto.
* libs/gcr/atomsdlg.cc: work on atom color and radius.
* libs/gcr/atomsdlg.h: ditto.
* libs/gcr/grid.cc: don't diplay the cursor when column < 0.
2011-07-29 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/atomsdlg.cc: some work on radii.
* libs/gcr/atomsdlg.h: ditto.
* libs/gcr/grid.cc: support double numbers edition.
* libs/gcugtk/message.cc: fixed a crasher.
2011-07-28 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/atomsdlg.cc: update element and coordinates.
* libs/gcr/atomsdlg.h: cleaned out all deprecated methods.
* libs/gcr/grid.cc: implement get/set_string.
* libs/gcr/grid.h: ditto.
* libs/gcu/atom.h: add new coordinates accessors.
* ui/table/state-thermometer.ui: fixed the adjustment.
2011-07-27 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/atomsdlg.cc: redesign progress.
* libs/gcr/atomsdlg.h: ditto.
* libs/gcr/cleavagesdlg.cc: fixed "Delete All" button sensitivity.
2011-07-26 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/atomsdlg.cc: add a GrcGrid for the atom list.
* libs/gcr/atomsdlg.h: ditto.
* libs/gcr/cleavagesdlg.cc: restore missing label.
* libs/gcr/document.cc: move Define() method from programs/crystal and fixed
crash when a dialog is called twice.
* libs/gcr/document.h: ditto.
* libs/gcr/grid.cc: add protected columns and mouse wheel scrolling support.
* programs/crystal/document.cc: move Define() method to parent class.
* programs/crystal/document.h: ditto.
* ui/crystal/atoms.ui: redesigned.
* ui/crystal/cleavages.ui: restore missing label.
2011-07-25 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/atomsdlg.cc: start redesign work.
* libs/gcr/atomsdlg.h: ditto.
* libs/gcr/grid.cc: enhance navigation, and add some support for strings.
* libs/gcr/grid.h: ditto.
* ui/crystal/atoms.ui: start redesign work.
2011-07-24 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/cleavage.cc: make cleaved planes number unsigned.
* libs/gcr/cleavage.h: ditto.
* libs/gcr/cleavagesdlg.cc: add checks for cleavages validity.
* libs/gcr/document.cc: ditto.
* libs/gcr/grid.cc: implement unsigned int support, double click and
validity checks.
* libs/gcr/grid.h: ditto.
2011-07-23 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/cleavagesdlg.cc: really implement cleavage change.
* libs/gcr/grid.cc: make it start being really usable.
2011-07-22 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/cleavagesdlg.cc: implement cleavage change.
* libs/gcr/cleavagesdlg.h: ditto.
* libs/gcr/document.cc: add a new method to check cleavages list coherence.
* libs/gcr/document.h: ditto.
* libs/gcr/grid.cc: more keyboard interaction.
* libs/gcu/chem3ddoc.cc: fixed model position.
* libs/gcu/dialog-owner.cc: make GetDialog() const.
* libs/gcu/dialog-owner.h: ditto.
* libs/gcugtk/dialog.cc: add a Closed() virtual method.
* libs/gcugtk/dialog.h: ditto.
2011-07-21 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/grid.cc: start interacting with the keyboard.
2011-07-20 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/cleavagesdlg.cc: removed obsolete code.
* libs/gcr/cleavagesdlg.h: ditto.
* libs/gcr/grid.cc: display a cursor.
2011-07-19 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/cleavagesdlg.cc: make this dialog instant apply.
* libs/gcr/cleavagesdlg.h: ditto.
* libs/gcr/document.h: set the Update() method virtual.
* libs/gcr/grid.cc: implement row deletion and horizontal expansion.
* libs/gcr/grid.h: ditto.
* ui/crystal/cleavages.ui: removed obsolete buttons.
2011-07-18 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: update libspreadsheet required version.
* libs/gcr/grid.cc: implement scrolling.
2011-07-17 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: use next gnumeric API (tentative).
* libs/gcr/cleavagesdlg.cc: redesigned.
* libs/gcr/grid.cc: add row headers and a vertical scrollbar.
* programs/crystal/docprop.cc: fixed window title when document title
is empty.
* programs/crystal/document.cc: ditto.
* programs/crystal/document.h: ditto.
* ui/crystal/cleavages.ui: redesigned.
2011-07-16 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/cleavagesdlg.cc: display existing cleavages.
* libs/gcr/cleavagesdlg.h: ditto.
* libs/gcr/grid.cc: ditto.
2011-07-15 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: add signals to GcrGrid.
* libs/gcr/grid.cc: ditto.
* libs/gcr/grid.h: ditto.
* libs/gcugtk/Makefile.am: ditto.
* libs/gcugtk/marshalers.list: ditto.
2011-07-14 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/grid.cc: display column headers.
* ui/crystal/cleavages.ui: restore title.
* ui/crystal/docprop.ui: redesigned.
2011-07-13 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/atom.cc: don't scale fractional coordinates.
* libs/gcr/cleavagesdlg.cc: fixed cast to DialogOwner.
* libs/gcr/document.cc: fixed cell paramters from CIF files.
* libs/gcr/grid.cc: fixed criticals.
* plugins/loaders/cif/cif.cc: fixed alpha angle loading.
* ui/crystal/cleavages.ui: redesigned.
2011-07-07 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/sizedlg.cc: redesigned dialog boxes.
* programs/crystal/view-settings.cc: ditto.
* ui/crystal/prefs.ui: ditto.
* ui/crystal/size.ui: ditto.
* ui/crystal/view-settings.ui: ditto.
2011-07-05 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcugtk/gcuperiodic.c: make sure that wanted colors are always used.
* ui/libgcu/gcuperiodic.ui: minor fixes.
2011-07-04 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/docprop.cc: cleaned out deprecated gtk code.
* libs/gcp/newfiledlg.cc: ditto.
* libs/gcp/reaction-prop-dlg.cc: ditto.
* libs/gcugtk/spectrumdoc.cc: use GtkGrid.
* libs/gcugtk/spectrumview.cc: ditto.
* libs/gcugtk/ui-builder.cc: removed GetCombo().
* libs/gcugtk/ui-builder.h: ditto.
* plugins/paint/selection/bracketstool.cc: ditto.
* programs/crystal/window.cc: use GtkGrid.
* programs/spectra/window.cc: ditto.
* programs/table/gchemtable-data-allocator.cc: use a GtkComboText.
* ui/paint/arrow-object.ui: ditto.
2011-07-03 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/chem3ddoc.cc: use the file name as title if the molecule has
no known name.
* programs/3d/window.cc: use GtkGrid.
2011-07-02 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/window.cc: use GtkGrid.
* libs/gcugtk/filechooser.cc: ditto.
* ui/libgcu/image-resolution.ui: added missing label.
2011-07-01 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/fontsel.cc: replace more boxes and tables.
* libs/gcp/tools.cc: fixed toolbars margins.
* plugins/paint/text/fontsel.ui: minor tweaks.
* ui/paint/tools.ui: fixed margins.
2011-06-30 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/preferences.cc: replace boxes and tables.
* libs/gcp/preferences.h: ditto.
* ui/paint/preferences.ui: ditto.
2011-06-29 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/residues/residues.ui: cleaning in plugins completed.
* plugins/paint/selection/brackets.ui: ditto.
* plugins/paint/selection/lassotool.cc: ditto.
* plugins/paint/selection/selectiontool.cc: ditto.
* plugins/paint/templates/new-template.ui: ditto.
* plugins/paint/templates/templates.ui: ditto.
* plugins/paint/text/fontsel.ui: ditto.
* plugins/paint/text/texttool.cc: ditto.
2011-06-28 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/brackets.cc: fixed a pixman warning.
* plugins/paint/residues/residues.ui: replace more boxes and tables.
* plugins/paint/selection/brackets.ui: ditto.
* plugins/paint/selection/bracketstool.cc: ditto.
* plugins/paint/selection/group.ui: ditto.
* plugins/paint/templates/new-template.ui: ditto.
* plugins/paint/templates/templates.ui: ditto.
* plugins/paint/templates/templatetool.cc: ditto.
* plugins/paint/text/fontsel.ui: ditto.
2011-06-08 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/grid.cc: make it compile again.
* libs/gcu/chain.cc: fixed an infinite loop condition.
* libs/gcu/molecule.cc: ditto.
* libs/gcu/molecule.h: ditto.
* plugins/paint/cycles/cycle.ui: replace more boxes and tables.
* plugins/paint/cycles/cyclen.ui: ditto.
* plugins/paint/residues/pseudo-atom.cc: mark as new whan loaded.
* plugins/paint/residues/residues-dlg.cc: replace more boxes and tables.
* plugins/paint/residues/residues.ui: ditto.
2011-06-05 Jean Bréfort <jean@acer>
* plugins/paint/atoms/orbital-prop.ui: replace more boxes and tables.
* plugins/paint/atoms/orbital.ui: ditto.
* plugins/paint/atoms/orbitaltool.cc: ditto.
* plugins/paint/bonds/bond.ui: ditto.
* plugins/paint/bonds/chain.ui: ditto.
2011-06-04 Jean Bréfort <jean@acer>
* libs/gccv/canvas.cc: fixed default color.
* libs/gcp/docprop.cc: replace more boxes and tables.
* libs/gcp/newfiledlg.cc: ditto.
* libs/gcr/grid.cc: ditto.
* plugins/paint/arrows/arrowtool.cc: ditto.
* plugins/paint/arrows/arrowtool.ui: ditto.
* plugins/paint/arrows/curvedarrowtool.cc: ditto.
* plugins/paint/arrows/curvedarrowtool.ui: ditto.
* ui/paint/H-pos.ui: ditto.
* ui/paint/arrow-object.ui: ditto.
* ui/paint/docprop.ui: ditto.
* ui/paint/newfiledlg.ui: ditto.
* ui/paint/preferences.ui: ditto.
* ui/paint/stringdlg.ui: ditto.
* ui/paint/stringinputdlg.ui: ditto.
* ui/paint/tools.ui: ditto.
* ui/paint/zoom.ui: ditto.
2011-06-01 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/chemistry.cc: use minus instead of an hyphen when displayin numbers.
* libs/gcu/element.cc: ditto.
* programs/table/gchemtable-curve.cc: replace last boxes and tables.
* programs/table/gchemtable-elt.cc: ditto.
* ui/table/curve.ui: ditto.
* ui/table/eltpage.ui: ditto.
2011-05-27 Jean Bréfort <jean.brefort@normalesup.org>
* programs/table/gchemtable-curve.cc: replace some boxes and tables with
grids.
* ui/table/acidity.ui: ditto.
* ui/table/block.ui: ditto.
* ui/table/curve.ui: ditto.
* ui/table/eltpage.ui: ditto.
* ui/table/family.ui: ditto.
* ui/table/state-thermometer.ui: ditto.
2011-05-23 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/chemistry.cc: add new functions for weight and electronic configuration.
* libs/gcu/chemistry.h: ditto.
* libs/gcu/element.cc: add a Stability flag for Element.
* libs/gcu/element.h: ditto.
* libs/gcugtk/gcuperiodic.c: add new configurable tips for element buttons.
* libs/gcugtk/gcuperiodic.h: ditto.
* libs/gcugtk/glview.cc: fix color in pixbuf export.
* libs/gcugtk/glview.h: cleaned out deprectated static data.
* libs/gcugtk/print-setup-dlg.cc: updated for Gtk+-3.0.
* libs/gcugtk/printable.cc: ditto.
* libs/gcugtk/printable.h: ditto.
* programs/table/gchemtable-app.cc: set full tips on buttons.
* ui/libgcu/print-setup.ui: updated for Gtk+-3.0.
2011-05-22 Jean Bréfort <jean.brefort@normalesup.org>
* Makefile.am: don't build osmesa related code anymore.
* configure.ac: ditto.
* libs/gcugtk/glview.cc: fix byte order.
* programs/calc/gchemcalc.cc: cleaned code.
* programs/table/gchemtable-app.cc: fix color display in table.
* programs/table/gchemtable-app.h: ditto.
* ui/calc/gchemcalc.ui: ported to Gtk+-3.0.
* ui/libgcu/gcuperiodic.ui: make it homogeneous.
2011-05-21 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcugtk/application.cc: add a transparency check button in image size dialog.
* libs/gcugtk/filechooser.cc: use GtkGrid as extra widget.
* libs/gcugtk/glview.cc: unset the GL context when done.
* programs/3d/application.cc: export images with transparent background when
requested.
* programs/crystal/application.cc: ditto.
* programs/crystal/document.cc: ditto.
* ui/libgcu/gcuperiodic.ui: request Gtk+-3.0.
* ui/libgcu/image-resolution.ui: use a GtkGrid.
* ui/libgcu/image-size.ui: add a transparency check button.
* ui/libgcu/print-setup.ui: update to Gtk+-3.0.
2011-05-20 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gogcrystalapp.cc: use a transparent background.
* libs/gcr/gcrcrystalviewer.cc: allow for a transparent background.
* libs/gcr/gcrcrystalviewer.h: ditto.
* libs/gcu/glview.cc: ditto.
* libs/gcu/glview.h: ditto.
* libs/gcugtk/chem3ddoc.cc: new file.
* libs/gcugtk/chem3ddoc.h: ditto.
* libs/gcugtk/gcuchem3dviewer.cc: allow for a transparent background.
* libs/gcugtk/gcuchem3dviewer.h: ditto.
* libs/gcugtk/glview.cc: ditto.
* libs/gcugtk/glview.h: ditto.
* programs/3d/application.cc: export images with a transparent background.
* programs/crystal/application.cc: ditto.
* programs/crystal/document.cc: print with transparent background.
2011-05-20 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/glview.cc: reimplement offscreen rendering.
* libs/gcu/glview.h: ditto.
* libs/gcugtk/glview.cc: ditto.
2011-05-19 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcugtk/Makefile.am: add -lX11 to LIBADD.
* libs/gcugtk/glview.cc: make GL rendering work on screen.
* libs/gcugtk/glview.h: ditto.
* programs/3d/application.cc: sanitize gcu namespace use.
* programs/3d/application.h: ditto.
* programs/3d/main.cc: ditto.
* programs/3d/window.cc: ditto.
* programs/crystal/application.cc: ditto.
* programs/crystal/atom.cc: ditto.
* programs/crystal/atom.h: ditto.
* programs/crystal/document.cc: ditto.
* programs/crystal/prefs.h: ditto.
* programs/crystal/view.cc: ditto.
* programs/crystal/view.h: ditto.
2011-05-18 Jean Bréfort <jean.brefort@normalesup.org>
* gchemutils.schemas.in: removed offscreen option.
* libs/gcugtk/glview.cc: statrt working on GLX direct calls.
* libs/gcugtk/glview.h: ditto.
* schemas/org.gnome.gchemutils.gschema.xml.in.in: removed offscreen option.
2011-05-17 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/fontsel.cc: fixed size issue.
* libs/gcr/gcrcrystalviewer.cc: ditto.
* libs/gcu/chem3ddoc.cc: add a CreateView() method.
* libs/gcu/chem3ddoc.h: ditto.
* libs/gcu/glview.h: add virtual GL related methoods.
* libs/gcugtk/Makefile.am: add new Chem3dDoc class.
* libs/gcugtk/chem3ddoc.cc: ditto.
* libs/gcugtk/chem3ddoc.h: ditto.
* libs/gcugtk/gcuchem3dviewer.cc: fixed size issue.
* libs/gcugtk/gcuspectrumviewer.cc: ditto.
* libs/gcugtk/glview.cc: implement virtual GL related methoods.
* libs/gcugtk/glview.h: ditto.
* programs/3d/document.cc: derive from gcugtk::Chem3dDoc.
* programs/3d/document.h: ditto.
2011-05-16 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/line-item.cc: add support for dashes.
* libs/gccv/line-item.h: ditto.
* libs/gccv/line.cc: ditto.
* plugins/paint/selection/plugin.cc: generate the merge tool icon using
the canvas.
2011-05-15 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/canvas.cc: make m_Color a settable property.
* libs/gccv/canvas.h: ditto.
* libs/gccv/line.cc: use auto color when needed.
* libs/gccv/rectangle.cc: ditto.
* libs/gcp/application.cc: build icons from canvas when provided.
* libs/gcp/application.h: ditto.
* plugins/paint/arrows/plugin.cc: ditto.
* plugins/paint/bonds/plugin.cc: ditto.
* plugins/paint/cycles/plugin.cc: ditto.
* plugins/paint/selection/plugin.cc: ditto.
* plugins/paint/text/plugin.cc: ditto.
2011-05-12 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/canvas.cc: replace expose event by draw event.
* libs/gcp/application.cc: restore buttons bitmaps, needs work.
* libs/gcp/tools.cc: use GtkGrid instead of GtkBox.
* libs/gcp/tools.h: ditto.
* libs/gcugtk/spectrumdoc.cc: set min and max on loadinf XY..XY values.
* ui/paint/tools.ui: use GtkGrid instead of GtkBox.
2011-05-11 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcugtk/gcuperiodic.c: make it work again.
* programs/3d/Makefile.am: make things link again.
* ui/libgcu/gcuperiodic.ui: fixed labels positions.
2011-05-10 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post branching version bump (0.13.4).
* all files: port to gtk+-3.0.
2011-05-08 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: fixed make dist.
* libs/gcu/application.cc: removed obsolete header.
* tests/Makefile.am: fixed libs.
2011-05-06 Jean Bréfort <jean.brefort@normalesup.org>
* database/space-groups.xml.in: fixed space group P -2yac.
* libs/gcp/molecule.cc: when loaded, update parent.
* plugins/paint/selection/group.cc: really support brackets.
2011-05-04 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/brackets.cc: two brackets should not enclose the same objects set.
* plugins/paint/selection/bracketstool.cc: ditto.
2011-05-03 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/brackets.cc: don't accept unconnected atoms inside brackets.
* libs/gcp/brackets.h: ditto.
* libs/gcp/fragment.h: ditto.
* libs/gcp/molecule.cc: ditto.
* libs/gcp/view.cc: ditto.
* libs/gcu/atom.cc: ditto.
* libs/gcu/atom.h: ditto.
* libs/gcu/bond.cc: ditto.
* libs/gcu/bond.h: ditto.
* plugins/paint/selection/bracketstool.cc: ditto.
2011-05-02 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gogcrystalapp.cc: fixed g++-4.6 warnings.
* libs/gccv/arrow.h: ditto.
* libs/gccv/text.cc: ditto.
* libs/gcp/brackets.cc: don't accept several brackets around the same object.
* libs/gcp/brackets.h: ditto.
* libs/gcp/fontsel.cc: fixed g++-4.6 warnings.
* libs/gcp/plugin.cc: really clear plugins data.
* libs/gcp/plugin.h: fixed documentation.
* libs/gcp/widgetdata.cc: don't accept several brackets around the same object.
* libs/gcr/document.cc: fixed g++-4.6 warnings.
* libs/gcu/chain.cc: ditto.
* libs/gcu/formula.cc: ditto.
* libs/gcugtk/spectrumdoc.cc: ditto.
* plugins/loaders/nuts/nuts.cc: ditto.
* plugins/paint/selection/bracketstool.cc: don't accept several brackets around the
same object.
* plugins/paint/text/texttool.cc: fixed g++-4.6 warnings.
* programs/calc/gchemcalc.cc: ditto.
2011-04-30 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gogcpapp.cc: add a default flag for atom symbols colors.
* libs/gcp/application.cc: ditto.
* libs/gcp/application.h: ditto.
* libs/gcp/preferences.cc: ditto.
* programs/paint/gchempaint.schemas.in: ditto.
* programs/paint/standaloneapp.cc: ditto.
* schemas/org.gnome.gchemutils.paint.gschema.xml.in.in: ditto.
* ui/paint/preferences.ui: ditto.
2011-04-29 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: allow colored atomic symbols on a per-document basis.
* libs/gcp/docprop.cc: ditto.
* libs/gcp/docprop.h: ditto.
* libs/gcp/document.cc: ditto.
* libs/gcp/document.h: ditto.
* ui/paint/docprop.ui: ditto.
2011-04-27 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: make brackets work.
* libs/gcp/brackets.cc: ditto.
* libs/gcp/brackets.h: ditto.
* libs/gcp/molecule.cc: ditto.
* libs/gcp/widgetdata.h: ditto.
* libs/gcu/molecule.cc: ditto.
* libs/gcugtk/cmd-context-gtk.cc: fixed response for modal message boxes.
* libs/gcugtk/message.cc: ditto.
* libs/gcugtk/message.h: ditto.
* plugins/paint/selection/bracketstool.cc: create the brackets.
2011-04-26 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: make selection a set instead of a list.
* libs/gcp/brackets.cc: ditto.
* libs/gcp/brackets.h: ditto.
* libs/gcp/mesomery.cc: ditto.
* libs/gcp/mesomery.h: ditto.
* libs/gcp/plugin.cc: implement plugin cleaning on exit.
* libs/gcp/plugin.h: ditto.
* libs/gcp/reaction-arrow.cc: make selection a set instead of a list.
* libs/gcp/reaction.cc: ditto.
* libs/gcp/reaction.h: ditto.
* libs/gcp/view.cc: ditto.
* libs/gcp/widgetdata.cc: ditto.
* libs/gcp/widgetdata.h: ditto.
* libs/gcu/object.cc: ditto.
* libs/gcu/object.h: ditto.
* plugins/paint/arrows/retrosynthesis.cc: ditto.
* plugins/paint/arrows/retrosynthesis.h: ditto.
* plugins/paint/residues/plugin.cc: implement plugin cleaning on exit.
* plugins/paint/residues/plugin.h: ditto.
* plugins/paint/selection/bracketstool.cc: create a bracket on release.
* plugins/paint/selection/bracketstool.h: ditto.
* plugins/paint/selection/groupdlg.cc: make selection a set instead of a list.
* plugins/paint/selection/lassotool.cc: ditto.
* plugins/paint/selection/selectiontool.cc: ditto.
* plugins/paint/templates/plugin.cc: implement plugin cleaning on exit.
* plugins/paint/templates/plugin.h: ditto.
* plugins/paint/templates/templatetool.cc: make selection a set instead of a list.
2011-04-20 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/templates/plugin.cc: don't assume in a static object
construtor that other static objects already exist.
2011-04-20 Jean Bréfort <jean.brefort@normalesup.org>
* all files: still more gcugtk split work, should be complete now.
2011-04-19 Jean Bréfort <jean.brefort@normalesup.org>
* all files: more gcugtk split work.
2011-04-17 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/document.cc: add brackets font related properties.
* libs/gcp/document.h: ditto.
* plugins/paint/selection/bracketstool.cc: allow brackets font selection.
* plugins/paint/selection/bracketstool.h: ditto.
2011-04-16 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/brackets.cc: fully implemented now.
* mozilla-plugin/Makefile.am: fix build after moves to gcugtk.
* mozilla-plugin/chem-viewer.cc: ditto.
2011-04-10 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/brackets.cc: display square and round brackets of all sizes.
* libs/gccv/brackets.h: ditto.
* plugins/paint/selection/brackets.ui: fix UI after API change.
* plugins/paint/selection/bracketstool.cc: ditto.
2011-04-09 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/brackets.cc: start showing brackets.
* libs/gccv/brackets.h: ditto.
* plugins/paint/selection/bracketstool.cc: ditto.
2011-04-02 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/docprop.cc: make things compile with gtk+-2.14.
* libs/gcp/docprop.h: ditto.
* libs/gcp/newfiledlg.cc: ditto.
* libs/gcp/newfiledlg.h: ditto.
* libs/gcp/preferences.cc: ditto.
* libs/gcp/preferences.h: ditto.
* libs/gcp/reaction-prop-dlg.cc: ditto.
* libs/gcr/atomsdlg.cc: ditto.
* libs/gcu/filechooser.cc: ditto.
* libs/gcu/spectrumdoc.cc: ditto.
* plugins/paint/residues/residues-dlg.cc: ditto.
* plugins/paint/templates/templatetool.cc: ditto.
* programs/3d/window.cc: ditto.
* programs/calc/gchemcalc.cc: ditto.
* programs/crystal/window.cc: ditto.
* programs/spectra/window.cc: ditto.
* programs/table/gchemtable-app.cc: ditto.
* programs/table/gchemtable-data-allocator.cc: ditto.
* ui/crystal/atoms.ui: make VBoxes really vertical.
2011-03-24 Jean Bréfort <jean.brefort@normalesup.org>
* openbabel/babelserv.cc: don't use POLLRDHUP when not defined. [#32768]
* osmesa/osmesaserv.cc: ditto.
2011-03-23 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: add new library.
* libs/Makefile.am: ditto.
* libs/gccv/brackets.cc: fixed some issues.
* libs/gccv/brackets.h: ditto.
* libs/gcp/Makefile.am: add new library.
* libs/gcp/brackets.cc: fixed brackets creation.
* libs/gcp/brackets.h: ditto.
* libs/gcp/document.cc: fixed saving.
* libs/gcp/tools.h: add new library.
* libs/gcr/Makefile.am: ditto..
* libs/gcr/atomsdlg.h: ditto.
* libs/gcu/Makefile.am: start moving gtk+ related code to a new library.
* libs/gcu/chemistry.cc: don't use glib.
* libs/gcu/chemistry.h: ditto.
* libs/gcu/element.h: ditto.
* libs/gcu/gcuchem3dviewer.cc: ditto.
* libs/gcu/gcuchem3dviewer.h: ditto.
* libs/gcu/gcucomboperiodic.c: ditto.
* libs/gcu/gcucomboperiodic.h: ditto.
* libs/gcu/gcuperiodic.c: ditto.
* libs/gcu/gcuperiodic.h: ditto.
* libs/gcu/gcuspectrumviewer.c: ditto.
* libs/gcu/gcuspectrumviewer.h: ditto.
* libs/gcu/isotope.cc: don't use glib.
* libs/gcu/isotope.h: ditto.
* libs/gcu/object.h: ditto.
* libs/gcugtk/Makefile.am: new library for gtk+ related code in gcu.
* libs/gcugtk/gcuchem3dviewer.cc: ditto.
* libs/gcugtk/gcucomboperiodic.c: ditto.
* libs/gcugtk/gcucomboperiodic.h: ditto.
* libs/gcugtk/gcuperiodic.c: ditto.
* libs/gcugtk/gcuperiodic.h: ditto.
* libs/gcugtk/gcuspectrumviewer.cc: ditto.
* libs/gcugtk/gcuspectrumviewer.h: ditto.
* plugins/paint/selection/bracketstool.cc: add brackets.
* plugins/paint/selection/bracketstool.h: ditto.
* programs/calc/gchemcalc.cc: use new library.
* programs/crystal/Makefile.am: ditto.
* programs/paint/main.cc: ditto.
* programs/table/Makefile.am: ditto.
* programs/table/gchemtable-app.h: ditto.
* programs/table/gchemtable-data.cc: ditto.
* tests/Makefile.am: ditto.
* tests/testgcuchem3dviewer.c: ditto.
* tests/testgcuperiodic.c: ditto.
2011-03-14 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: don't add -lOSMesa to everything.
* libs/gcu/application.cc: fixed export using OpenBabel.
2011-03-11 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: load from inchi.
* libs/gcp/application.h: ditto.
* libs/gcp/molecule.cc: removed debug statements.
* libs/gcu/application.cc: propagate options to OpenBabel.
* libs/gcu/document.cc: ditto.
2011-03-10 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/molecule.cc: fixed loading alignment object.
* libs/gcu/document.cc: a better fix for pasting.
2011-03-09 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: try to keep carbon atom in the plane as much as
possible when importing the parity.
* libs/gcp/stringdlg.cc: don't crash when copying a string from a closed
dialog.
* libs/gcu/bond.cc: add a default id.
* libs/gcu/document.cc: fixed pasting.
2011-03-08 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: still more work on parity import.
* libs/gcu/chain.cc: fixed typo.
2011-03-07 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: more work on parity import.
* libs/gcu/chain.cc: implement some chain structure analysis.
* libs/gcu/chain.h: ditto.
2011-03-05 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: more work on parity import.
* libs/gcu/chain.cc: ditto.
* libs/gcu/chain.h: ditto.
2011-03-04 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: more work on parity import.
* libs/gcp/atom.h: ditto.
* libs/gcp/molecule.cc: ditto.
* libs/gcp/molecule.h: ditto.
2011-03-03 Jean Bréfort <jean.brefort@normalesup.org>
* Makefile.am: add a new GL offscreen rendering external process.
* configure.ac: ditto.
* libs/gcp/atom.cc: fixed a test.
* osmesa/Makefile.am: new GL offscreen rendering external process.
* osmesa/osmesaserv.cc: ditto.
* osmesa/socket.cc: ditto.
* osmesa/socket.h: ditto.
2011-03-02 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: add all GSettings schemas.
* libs/gcp/atom.cc: more work on parity import.
* libs/gcp/atom.h: ditto.
* libs/gcp/molecule.cc: ditto.
* libs/gcp/molecule.h: ditto.
* libs/gcu/objprops.h: ditto.
* plugins/paint/arrows/Makefile.am: add all GSettings schemas.
* plugins/paint/arrows/org.gnome.gchemutils.paint.plugins.arrows.gs
chema.xml.in.in: ditto.
* schemas/Makefile.am:
* schemas/org.gnome.gchemutils.crystal.gschema.xml.in.in: ditto.
* schemas/org.gnome.gchemutils.gschema.xml.in.in: ditto.
* schemas/org.gnome.gchemutils.paint.gschema.xml.in.in: ditto.
2011-03-01 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: import parity.
* libs/gcp/atom.h: ditto.
* libs/gcp/molecule.cc: store atoms with known parity,still need to do
something with that.
* libs/gcp/molecule.h: ditto.
* libs/gcu/chem3ddoc.cc: delete rhe view from the destructor.
* libs/gcu/objprops.h: add ATOM_PARITY property.
* libs/gcu/printable.cc: unref the GOConfNode.
* plugins/loaders/cml/cml.cc: import atomParity.
2011-02-28 Jean Bréfort <jean.brefort@normalesup.org>
* Makefile.am: add schemas directory.
* configure.ac: ditto.
* libs/gcp/view.cc: add View::GetVisibleArea().
* libs/gcp/view.h: ditto.
* libs/gcp/window.cc: scale the imported molecule and move to center
of visible area.
* schemas/Makefile.am: start migration to GSettings.
* schemas/org.gnome.gchemutils.gschema.xml.in.in: ditto.
2011-02-27 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/molecule.cc: add Molecule::GetMeanBondLength ().
* libs/gcp/molecule.h: ditto.
* libs/gcp/window.cc: more work on molecule import from string.
* libs/gcu/document.h: add an accessor to new objects.
2011-02-26 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/window.cc: start work on molecule import from string.
* libs/gcp/window.h: ditto.
* libs/gcu/application.cc: moved documentation to application.h.
* libs/gcu/application.h: ditto.
* ui/paint/Makefile.am: new ui file.
* ui/paint/stringdlg.ui: set the vbox really vertical.
* ui/paint/stringinputdlg.ui: new ui file.
2011-02-21 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/fragment-residue.cc: fix build with gcc-4.6. [#32363]
2011-02-20 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post branching version bump (0.13.3).
2011-02-20 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: remove the Wikipedia tool.
* database/databases.xml.in: fixed ChemSpider URI.
* libs/gcp/molecule.cc: implement configurable access to databases.
* libs/gcp/molecule.h: ditto.
* plugins/paint/Makefile.am: remove the Wikipedia tool.
2011-02-19 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/molecule.cc: don't crash on openbabel failure.
* openbabel/socket.cc: fix communications issues.
2011-02-18 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/molecule.cc: add ContentType support at the molecule level.
* libs/gcu/molecule.cc: ditto.
* libs/gcu/molecule.h: ditto.
* plugins/loaders/ctfiles/ctfiles.cc: make things compile again.
2011-02-17 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/circle.cc: fixed an non initialized variable issue.
* libs/gcp/document.cc: don't always add new object to a new operation.
* libs/gcp/operation.cc: clear extra white spaces.
* plugins/loaders/ctfiles/ctfiles.cc: some work on molfiles.
* plugins/paint/arrows/arrowtool.cc: fix undo after libs/gcp/document.cc
change.
* plugins/paint/text/texttool.cc: fix a crasher.
2011-02-16 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/bonds/bondtool.cc: fix hashes orientation.
* themes/paint/Gcp-Modern: better hashes.
2011-02-15 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gogcpapp.cc: fix an alignment issue.
* libs/gcp/document.cc: fix alignment with several children
* libs/gcp/mechanism-step.cc: don't save an empty step.
* libs/gcp/mechanism-step.h: ditto.
* libs/gcp/reaction-step.cc: don't create empty steps.
* libs/gcp/target.cc: remove signals when destroyed.
* libs/gcp/target.h: ditto.
* libs/gcu/object.cc: accept unsaved children in Object::SaveChildren().
* plugins/paint/bonds/bondtool.cc: fixed an item position issue.
2011-02-14 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/fragment.cc: allow for minus charge in the middel of a string.
2011-02-13 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/document.cc: new comment.
* libs/gcp/reaction-step.cc: more undo fix in reactions with curved arrows.
2011-02-12 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/mechanism-step.cc: don't add new molecules when undoing a
mechanism arrow deletion. [#32433]
2011-02-09 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: new CTfiles loader plugin.
* plugins/loaders/ctfiles/Makefile.am: ditto.
* plugins/loaders/ctfiles/ctfiles.cc: ditto.
* plugins/loaders/ctfiles/plugin.xml.in: ditto.
* other files: updated copyright.
2011-02-07 Jean Bréfort <jean.brefort@normalesup.org>
* programs/paint/main.cc: try to save changed files on crashing.
* programs/paint/standaloneapp.cc: ditto.
* programs/paint/standaloneapp.h: ditto.
2011-02-06 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: request OpenBabel >= 2.3.0.
* libs/gcp/Makefile.am: export molecules to avogadro and gchem3d.
* libs/gcp/application.cc: ditto.
* libs/gcp/application.h: ditto.
* libs/gcp/molecule.cc: ditto.
* libs/gcr/atom.cc: fix space group detection with dummy atoms.
* libs/gcu/application.cc: implement ConvertToCML, GsfIntput version.
* libs/gcu/macros.h: add a static property macro.
2011-02-05 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: fix automake warning.
* database/Makefile.am: add new datas.
* database/databases.xml.in: new list of databases.
* libs/gccv/brackets.cc: add more sizes.
* libs/gcu/application.cc: start work on extern databases.
* libs/gcu/application.h: ditto.
* openbabel/socket.cc: implement long option such as --gen3D support.
2011-02-04 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/molecule.cc: implemement standard InChIKey generation.
* libs/gcp/molecule.h: ditto.
* libs/gcu/application.cc: new fix in ConvertFromCML.
* openbabel/socket.cc: work on openbabel options support.
2011-02-03 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/Makefile.am: renamed libgcr to libgcrystal to avoid confusion
with the cryptography related libgcr.
* libs/gcr/Makefile.am: ditto.
* mozilla-plugin/Makefile.am: ditto.
* programs/crystal/Makefile.am: ditto.
2011-02-02 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/molecule.cc: moved InChI and SMILES generation to gcu::Molecule.
* libs/gcp/molecule.h: ditto.
* libs/gcp/stringdlg.cc: add InChIKey support.
* libs/gcp/stringdlg.h: ditto.
* libs/gcu/application.h: mane ConvertTo/FromCML public.
* libs/gcu/molecule.cc:moved InChI and SMILES generation from gcp::Molecule.
* libs/gcu/molecule.h: ditto.
* plugins/paint/wikipedia/wikipediatool.cc: fixed after method signature
change.
2011-02-01 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/molecule.cc: reimplement BuildInChI().
* libs/gcu/application.cc: implement more babelserver related code.
* plugins/loaders/cml/cml.cc: save any object, not only a whole document.
2011-01-31 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/application.cc: make some API changes so that any Object const*
can be saved.
* libs/gcu/application.h: ditto.
* libs/gcu/cmd-context.h: ditto.
* libs/gcu/document.h: ditto.
* libs/gcu/loader.cc: ditto.
* libs/gcu/loader.h: ditto.
* plugins/loaders/cdx/cdx.cc: ditto.
* plugins/loaders/cdxml/cdxml.cc: ditto.
* plugins/loaders/cif/cif.cc: ditto.
* plugins/loaders/cml/cml.cc: ditto.
2011-01-30 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/Makefile.am: don't depend anypore on OpenBabel.
* goffice/gchemutils.cc: ditto.
* libs/gcp/Makefile.am: ditto.
* libs/gcp/application.cc: ditto.
* libs/gcp/application.h: ditto.
* libs/gcp/atom.cc: ditto.
* libs/gcp/atom.h: ditto.
* libs/gcp/document.cc: ditto.
* libs/gcp/document.h: ditto.
* libs/gcp/molecule.cc: ditto.
* libs/gcp/molecule.h: ditto.
* mozilla-plugin/Makefile.am: ditto.
* plugins/paint/arrows/Makefile.am: ditto.
* plugins/paint/atoms/Makefile.am: ditto.
* plugins/paint/bonds/Makefile.am: ditto.
* plugins/paint/cycles/Makefile.am: ditto.
* plugins/paint/residues/Makefile.am: ditto.
* plugins/paint/selection/Makefile.am: ditto.
* plugins/paint/templates/Makefile.am: ditto.
* plugins/paint/text/Makefile.am: ditto.
* plugins/paint/text/fragmenttool.cc: ditto.
* plugins/paint/wikipedia/Makefile.am: ditto.
* plugins/paint/wikipedia/wikipediatool.cc: ditto.
* programs/3d/Makefile.am: ditto.
* programs/3d/document.h: ditto.
* programs/crystal/Makefile.am: ditto.
* programs/paint/Makefile.am: ditto.
2011-01-29 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/chem3ddoc.cc: reimplemented Chem3dDoc::LoadData().
2011-01-27 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/brackets.cc: add brackets type.
* libs/gccv/brackets.h: ditto.
* libs/gcp/brackets.cc: move brackets type to gccv.
* libs/gcp/brackets.h: ditto.
* libs/gcp/widgetdata.cc: add GetObjectsBounds().
* libs/gcp/widgetdata.h: ditto.
* libs/gcu/application.cc: don't block if the soecket is closed.
* openbabel/babelserv.cc: delete the socket on error.
* programs/spectra/application.cc: use jcamp-dx before any other type.
* programs/spectra/gspectrum.cc: int goffice plugins before loaders.
2011-01-26 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/Makefile.am: add brackets.*.
* libs/gccv/brackets.cc: new Item class.
* libs/gccv/brackets.h: ditto.
* libs/gcp/brackets.h: remove unneeded virtual keyword.
2011-01-25 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/Makefile.am: no more direct linking to openbabel.
* libs/gcu/application.cc: load distant files using babelserver.
* libs/gcu/chem3ddoc.cc: no more use of openbabel.
* libs/gcu/chem3ddoc.h: ditto.
* libs/gcu/gcuchem3dviewer.cc: ditto.
* libs/gcu/gcuchem3dviewer.h: ditto.
* openbabel/babelserv.cc: don't close socket too early.
* tests/testbabelserver.c (main): avoid infinite loop.
2011-01-24 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: do not call Application::Load() for native files.
* libs/gcp/document.cc: fixed merging molecules owned by another object.
* plugins/paint/cycles/cycletool.cc: never address a deleted string.
2011-01-23 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/brackets.cc: add content type.
* libs/gcp/brackets.h: ditto.
* libs/gcp/fragment.cc: removed obsolete code.
* libs/gcp/mechanism-step.cc: don't crash when adding an arrow ouside
a reaction.
* plugins/paint/cycles/cycletool.cc: do not add a cycle when not allowed.
2011-01-19 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/Makefile.am: add libexecdir to DEFS.
* libs/gcu/application.cc: new methods to support the use of babelserver.
* libs/gcu/application.h: ditto.
* libs/gcu/chem3ddoc.cc: remove unwanted white spaces.
* openbabel/babelserv.cc: use a user dependant socket.
* openbabel/socket.cc: fix loading from file.
* tests/testbabelserver.c (main): use a user dependant socket.
2011-01-18 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/application.cc: allow load/save operations using any gsf
stream.
* libs/gcu/application.h: ditto.
* openbabel/babelserv.cc: fixed reading from socket.
* openbabel/socket.cc: implement input and output from/to local files.
* openbabel/socket.h: ditto.
* tests/testbabelserver.c (main): use openbabel format names instead of
mime types.
2011-01-16 Jean Bréfort <jean.brefort@normalesup.org>
* openbabel/babelserv.cc: make valgrind happy.
* openbabel/socket.cc: make things work.
* openbabel/socket.h: ditto.
* tests/testbabelserver.c (main): write a mol file for methane and get
the InChI.
2011-01-13 Jean Bréfort <jean.brefort@normalesup.org>
* openbabel/babelserv.cc: more work on reading commands.
* openbabel/socket.cc: ditto.
* plugins/paint/arrows/curvedarrowtool.cc: update parent after adding
an arrow.
* tests/testbabelserver.c (main): send a full command.
2011-01-04 Jean Bréfort <jean.brefort@normalesup.org>
* openbabel/Makefile.am: move babelserver to libexecdir.
* tests/Makefile.am: ditto.
* tests/testbabelserver.c (main): ditto.
2011-01-02 Jean Bréfort <jean.brefort@normalesup.org>
* openbabel/Makefile.am: add new files.
* openbabel/babelserv.cc: start read code.
* openbabel/socket.cc: new class.
* openbabel/socket.h: ditto.
* tests/testbabelserver.c (main): start sending options.
2010-12-29 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/brackets.cc: partial implementation of SetEmbeddedObjects();
* libs/gcp/brackets.h: ditto.
* plugins/paint/selection/bracketstool.cc: ditto.
* plugins/paint/selection/plugin.cc: ditto.
2010-12-28 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gchemutils.cc: don't use the GdkWindow related API.
* goffice/gogcpapp.cc: safer use of cairo.
* goffice/gogcrystalapp.cc: display as bitmap if possible.
* plugins/paint/selection/bracketstool.cc: enhance selection evaluation.
2010-12-27 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/item.cc: fixed object item dimension evaluation.
* libs/gccv/item.h: ditto.
* libs/gcp/widgetdata.cc: ditto.
2010-12-26 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: fixed a charge automatic position issue.
* libs/gcp/mechanism-arrow.cc: add a default Id.
* libs/gcu/document.cc: fixed a major loading issue.
2010-12-25 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: save all children.
* libs/gcp/electron.cc: serialize the Id.
* libs/gcp/fragment-atom.cc: serialize an orbital child if any.
* libs/gcp/fragment.cc: ditto.
* libs/gcp/reaction-step.cc: make GetYAlign() safer.
* plugins/paint/atoms/orbitaltool.cc: fixed one more undo/redo issue.
2010-12-24 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/fragment.cc: fragments accept local charges again.
* libs/gcp/mechanism-step.cc: better fix.
* plugins/paint/arrows/curvedarrowtool.cc: fixed undo/redo.
2010-12-23 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: ensure that the displayed options page always
correpond to the active tool.
* libs/gcp/mechanism-step.cc: when destroying, reparent children when we
are inside a reaction.
* libs/gcp/reaction-step.cc: new ReactionStep:AddMolecule() method.
* libs/gcp/reaction-step.h: ditto.
2010-12-22 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/mechanism-step.cc: destroy a mechanismstep when the last arrow
is removed.
2010-12-16 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/arrows/curvedarrowtool.cc: removed a printf debug statement.
* plugins/paint/selection/lassotool.cc: allow rotation around an atom, and
call EmitSignal for all modified objects.
2010-12-12 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: use AC_CONFIG_HEADERS instead of AM_CONFIG_HEADER.
* libs/gcp/atom.cc: fixed electrons lone pairs count for atoms with
an extended octet.
* libs/gcp/tool.cc: don't set Tool::m_Pressed when OnClicked return false.
* plugins/paint/residues/residues-dlg.cc: don't use deprecated
GtkNotebookPage.
* programs/calc/gchemcalc.cc: ditto.
2010-12-09 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/tool.cc: avoid crashes when activating a tool.
2010-12-07 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/tool.cc: do not allow document changes using keyboard while
dragging the mouse. [#31812]
* libs/gcp/view.cc: ditto.
* libs/gcp/window.cc: ditto.
2010-12-06 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/bonds/chaintool.cc: fixed more undo/redo issues.
* plugins/paint/cycles/cycletool.cc: ditto.
2010-12-01 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/mechanism-arrow.cc: never remove a molecule from it's reactant
parent.
* libs/gcp/reactant.cc: update Child when needed.
* libs/gcp/reaction-step.cc: remove unneeded operators.
* libs/gcp/view.cc: fix more undo/redo issues.
2010-11-27 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/document.cc: fixed more undo/redo issues.
* libs/gcp/document.h: ditto.
* libs/gcp/view.cc: ditto.
* plugins/paint/selection/erasertool.cc: ditto.
2010-11-26 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/document.cc: don't crash when deleting a partial selection.
* libs/gcp/document.h: ditto.
* libs/gcp/view.cc: ditto.
2010-11-25 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post branching version bump (0.13.2).
* libs/gcp/reaction-step.cc: fixed serialization issues.
* libs/gcp/theme.cc: really save the theme (one line accidentally removed
earlier).
* libs/gcu/document.cc: clean dirty objects set after cleaning.
2010-11-24 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/spectrumdoc.cc: change interface after a FID to spectrum
transform.
* mozilla-plugin/moz-plugin.c: fixed typo.
* programs/spectra/window.cc: always use the first Y axis when displaying
coordinates.
2010-11-21 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/spectrumdoc.cc: fix NMR spectrum integration.
* plugins/loaders/nuts/nuts.cc: fix document title.
* programs/spectra/application.cc: ditto.
* programs/spectra/document.cc: ditto.
* programs/spectra/document.h: ditto.
* programs/spectra/view.cc: ditto.
2010-11-20 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/spectrumdoc.cc: fixed offset when importing a NUTS .spc file.
* plugins/loaders/nuts/nuts.cc: ditto.
2010-11-15 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/document.cc: fixed undo after erasing atoms and/or bonds.
* plugins/paint/selection/erasertool.cc: ditto.
2010-11-15 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/line-item.h: make line width change the bounds. [#31654]
2010-11-10 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: test for exp10 and use pow instead if not available.
[#31606]
* libs/gcu/spectrumdoc.cc: ditto.
2010-11-09 Jean Bréfort <jean.brefort@normalesup.org>
* gchemutils.xml.in: also accept *.spc files.
* plugins/loaders/nuts/nuts.cc: ditto.
* plugins/loaders/nuts/plugin.xml.in: ditto.
2010-10-29 Jean Bréfort <jean.brefort@normalesup.org>
* gchemutils.xml.in: add a new NUTS mime type.
* libs/gcu/spectrumdoc.cc: make
* plugins/loaders/nuts/plugin.xml.in: add support for spectra, not
only fids.
2010-10-27 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/spectrumdoc.cc: phasing grossly works, needs refinement.
2010-10-26 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/spectrumdoc.cc: more work on phasing, but still not always
working.
2010-10-25 Jean Bréfort <jean.brefort@normalesup.org>
* database/space-groups.xml.in: fixed group 104.
* libs/gcu/spectrumdoc.cc: more work on phasing.
2010-10-24 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/brackets.cc: load brackets.
* libs/gcp/brackets.h: ditto.
* libs/gcu/spectrumdoc.cc: more work on phasing.
2010-10-22 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/brackets.cc: save brackets.
* libs/gcp/brackets.h: ditto.
* libs/gcu/spectrumdoc.cc: some work on NMR spectrum phasing.
2010-10-20 Jean Bréfort <jean.brefort@normalesup.org>
* openbabel/babelserv.cc: start the server.
* tests/Makefile.am: new test program.
* tests/testbabelserver.c (main): ditto.
2010-10-17 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/object.cc: fixed crash in Object::Clear(). (Fredora #637564)
2010-10-10 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/Makefile.am: add new files.
* libs/gcp/application.cc: new gcp::Brackets class.
* libs/gcp/brackets.cc: ditto.
* libs/gcp/brackets.h: ditto.
* libs/gcp/window.cc: enhanced recents file code.
* libs/gcr/cleavagesdlg.cc: changed the grid creation signature.
* libs/gcr/grid.cc: ditto.
* libs/gcr/grid.h: ditto.
* libs/gcu/application.cc: set dir after loading a file.
* libs/gcu/spectrumdoc.cc: fixed FID transform.
* plugins/loaders/nuts/nuts.cc: set some more properties.
* programs/spectra/application.cc: enhanced recents file code.
* programs/spectra/application.h: ditto.
* programs/spectra/window.cc: ditto.
2010-10-03 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/spectrumdoc.cc: make fourier transform really work.
2010-09-29 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/bond.cc: allays update cycles when loaded.
* libs/gcu/spectrumdoc.cc: some work on FID transform using fft.
* libs/gcu/spectrumdoc.h: ditto.
2010-09-28 Jean Bréfort <jean.brefort@normalesup.org>
* database/elecprops.xml.in: added elements 117 and 118.
* database/elements.xml.in: ditto.
* libs/gcu/element.cc: don't crash if no electronegativity is known.
* programs/table/gchemtable-elt.cc: don't crash if weight is unknown.
* ui/libgcu/gcuperiodic.ui: added elements 117 and 118.
2010-09-26 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/objprops.h: add more spectrum related properties.
* libs/gcu/spectrumdoc.cc: ditto.
* plugins/loaders/nuts/nuts.cc: imports the time related data.
2010-09-25 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: enhance the command context API.
* libs/gcp/application.h: ditto.
* libs/gcr/atom.cc: fixed Atpm::SetProperty().
* libs/gcu/application.cc: enhance the command context API.
* libs/gcu/application.h: ditto.
* libs/gcu/chem3ddoc.cc: ditto.
* libs/gcu/cmd-context-gtk.cc: ditto.
* libs/gcu/cmd-context-gtk.h: ditto.
* libs/gcu/cmd-context.cc: ditto.
* libs/gcu/cmd-context.h: ditto.
* libs/gcu/loader.cc: ditto.
* libs/gcu/loader.h: ditto.
* mozilla-plugin/chem-viewer.cc: ditto.
* programs/crystal/application.cc: ditto.
* programs/spectra/application.cc: ditto.
2010-09-24 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: use CmdContext instead of gtk to display
messages when serializing.
* libs/gcr/document.h: fixed typo in docs.
* libs/gcu/cmd-context-gtk.cc: add Message method.
* libs/gcu/cmd-context-gtk.h: ditto.
* libs/gcu/cmd-context.h: ditto.
* libs/gcu/objprops.h: add spectrum related entries.
* libs/gcu/spectrumdoc.cc: implement GetProperty().
* libs/gcu/spectrumdoc.h: ditto.
* plugins/loaders/nuts/nuts.cc: load data to the document.
* programs/paint/standaloneapp.cc: don't return an invalid window.
2010-09-22 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/Makefile.am: some work on command contexts.
* libs/gcu/application.cc: ditto.
* libs/gcu/application.h: ditto.
* libs/gcu/cmd-context-gtk.cc: ditto.
* libs/gcu/cmd-context-gtk.h: ditto.
* libs/gcu/cmd-context.cc: ditto.
* libs/gcu/cmd-context.h: ditto.
2010-09-12 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/Makefile.am: moved more files from programs/crystal.
* libs/gcr/celldlg.cc: ditto.
* libs/gcr/celldlg.h: ditto.
* libs/gcr/document.cc: ditto.
* libs/gcr/document.h: ditto.
* libs/gcr/linesdlg.cc: ditto.
* libs/gcr/linesdlg.h: ditto.
* libs/gcr/sizedlg.cc: ditto.
* libs/gcr/sizedlg.h: ditto.
* libs/gcu/objprops.h: add some spectrum related properties.
* libs/gcu/spectrumdoc.cc: ditto.
* libs/gcu/spectrumdoc.h: ditto.
* plugins/loaders/nuts/nuts.cc: ditto.
* programs/crystal/Makefile.am: moved more files to libs/gcr.
* programs/crystal/celldlg.cc: ditto.
* programs/crystal/celldlg.h: ditto.
* programs/crystal/document.cc: ditto.
* programs/crystal/document.h: ditto.
* programs/crystal/linesdlg.cc: ditto.
* programs/crystal/linesdlg.h: ditto.
* programs/crystal/sizedlg.cc: ditto.
* programs/crystal/sizedlg.h: ditto.
* programs/paint/gchempaint.schemas.in: fixed typo.
2010-09-11 Jean Bréfort <jean.brefort@normalesup.org>
* Makefile.am: attempt to isolate OpenBabel calls.
* configure.ac: ditto.
* libs/gcu/loader.cc: implement spectra support.
* openbabel/Makefile.am: attempt to isolate OpenBabel calls.
* openbabel/babelserv.cc: ditto.
* plugins/loaders/Makefile.am: new NUTS loader.
* plugins/loaders/nuts/Makefile.am: ditto.
* plugins/loaders/nuts/nuts.cc: ditto.
* plugins/loaders/nuts/plugin.xml.in: ditto.
* programs/spectra/application.cc: ditto.
* programs/spectra/application.h: ditto.
2010-09-05 Jean Bréfort <jean.brefort@normalesup.org>
* gchemutils.xml.in: add mime type for NUTS FID.
* libs/gcr/Makefile.am: add new files.
* libs/gcr/application.cc: new application class.
* libs/gcr/application.h: ditto.
* libs/gcr/atomsdlg.cc: moved from gcrystal.
* libs/gcr/atomsdlg.h: ditto.
* libs/gcr/document.h: make atoms dialog work.
* programs/crystal/Makefile.am: removed atoms dialog related files.
* programs/crystal/application.cc: derive from gcr::Application.
* programs/crystal/application.h: ditto.
* programs/crystal/atomsdlg.cc: moved to libs/gcr.
* programs/crystal/atomsdlg.h: ditto.
* programs/crystal/document.cc: use gcr::AtomsDlg.
* programs/crystal/document.h: ditto.
2010-08-25 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/Makefile.am: make libgcr link with GNU gold ld.
2010-08-23 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/cleavagesdlg.cc: work on GcrGrid use.
* libs/gcr/grid.cc: ditto.
* ui/crystal/cleavages.ui: ditto.
2010-08-22 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/Makefile.am: moved cleavages dialog from programs/crystal.
* libs/gcr/cleavagesdlg.cc: ditto and use GcrGrid (not working yet).
* libs/gcr/cleavagesdlg.h: ditto.
* libs/gcr/document.cc: ditto.
* libs/gcr/document.h: ditto.
* libs/gcr/grid.cc: derives from GocCanvas.
* programs/crystal/Makefile.am: moved cleavages dialog to libs/gcr.
* programs/crystal/cleavagesdlg.cc: ditto.
* programs/crystal/cleavagesdlg.h: ditto.
* programs/crystal/document.cc: ditto.
* programs/crystal/document.h: ditto.
* ui/crystal/cleavages.ui: removed the GtkTreeView.
2010-08-21 Jean Bréfort <jean.brefort@normalesup.org>
* programs/spectra/application.cc: more setlocale eradication work.
* programs/table/gchemtable-app.cc: fix clipboard support for curves.
* programs/table/gchemtable-curve.cc: ditto.
2010-08-19 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/chem3ddoc.cc: more setlocale eradication work.
* libs/gcu/element.cc: ditto.
* libs/gcu/gcuspectrumviewer.cc: ditto.
* libs/gcu/spectrumdoc.cc: ditto.
2010-08-18 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/atom.cc: fixed various serialization issues.
* plugins/loaders/cdx/cdx.cc: ditto.
* plugins/loaders/cdxml/cdxml.cc: ditto.
* plugins/loaders/cml/cml.cc: ditto.
2010-08-17 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/loaders/cdx/cdx.cc: replaced all printf and scanf instances.
* plugins/loaders/cdxml/cdxml.cc: ditto.
* plugins/loaders/cif/cif.cc: ditto.
* plugins/loaders/cml/cml.cc: ditto.
2010-08-16 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/application.cc: more setlocale eradication work.
* plugins/loaders/cml/cml.cc: ditto.
* plugins/paint/selection/bracketstool.cc: statrt testing the selection.
* plugins/paint/selection/bracketstool.h: ditto.
* programs/crystal/document.cc: more setlocale eradication work.
2010-08-12 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/document.cc: more setlocale eradication work.
* libs/gcp/theme.cc: ditto.
* libs/gcr/document.cc: ditto.
* programs/crystal/document.cc: ditto.
2010-08-11 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gchemutils.cc: make things compile again with current goffice.
* goffice/gogcrystalapp.cc: more work on crystal support.
* goffice/gogcrystalwin.cc: ditto.
* libs/gcp/application.cc: more setlocale eradication work.
* libs/gcp/document.cc: ditto.
* libs/gcp/view.cc: ditto.
* libs/gcr/window.h: more work on crystal support in component.
2010-08-10 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/molecule.cc: more setlocale eradication work.
* libs/gcp/theme.cc: ditto.
* libs/gcu/macros.h: new conversionmacros between char* ans xmlChar*.
* libs/gcu/xml-utils.cc: new ReadInt() and WriteInt convenience functions.
* libs/gcu/xml-utils.h: ditto.
2010-08-09 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gogcrystalapp.cc: do not use setlocale when loading a gcrystal
file.
* libs/gcr/document.cc: ditto.
* libs/gcu/xml-utils.cc: ditto.
* libs/gcu/xml-utils.h: ditto.
* programs/crystal/document.cc: ditto.
2010-08-08 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gogcpapp.cc: fixed a memory leak.
* goffice/gogcrystalapp.cc: import the document.
* libs/gcp/fontsel.cc: remove slanted fonts when requested.
* libs/gcp/fragment.cc: fix loading.
2010-08-05 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gchemutils.cc: make the crystal component use a window.
* libs/gcp/fontsel.cc: add a new "label" property.
* libs/gcp/fontsel.h: ditto.
* plugins/paint/selection/bracketstool.cc: set the current font in the
properties page.
* plugins/paint/selection/bracketstool.h: ditto.
2010-08-04 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post branching version bump (0.13.1).
* libs/gcp/fontsel.cc: add a new property: "allow-slanted".
* libs/gcp/fontsel.h: ditto and fixed a type macro.
* libs/gcp/preferences.cc: use fixed a type macro.
* plugins/paint/selection/bracketstool.cc: add an font selector not
allowing slanted fonts.
2010-08-03 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/item.cc: fixed a compilation warning.
* libs/gccv/item.h: doc typo.
* tests/Makefile.am: make testgcrcrystalviewer build.
* tests/testgcrcrystalviewer.c (main): ditto.
2010-08-03 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/selection/bracketstool.cc: fully implement OnDrag().
2010-08-02 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: prohibit a reaction operator partial slection
when the whole reaction is not selected.
* libs/gcp/reaction-step.cc: fix reaction step loading.
* libs/gcp/reaction-step.h: ditto.
* libs/gcp/widgetdata.cc: prohibit a reaction operator partial slection
when the whole reaction is not selected.
* libs/gcu/document.cc: fix reaction step loading
* plugins/paint/arrows/retrosynthesis.cc: ensure that links are correctly
set when pasting data.
* plugins/paint/arrows/retrosynthesisarrow.cc: ditto.
* plugins/paint/arrows/retrosynthesisarrow.h: ditto.
* plugins/paint/arrows/retrosynthesisstep.cc: ditto.
* plugins/paint/atoms/orbital.cc: ditto.
* plugins/paint/selection/group.cc: ditto.
* plugins/paint/selection/lassotool.cc: ditto.
2010-08-01 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/bond.cc: fixed more issues related to pasting a partial
selection.
* libs/gcp/document.cc: ditto.
* libs/gcp/view.cc: ditto.
* libs/gcp/widgetdata.cc: ditto.
* libs/gcp/widgetdata.h: ditto.
* plugins/paint/selection/lassotool.cc: ditto.
2010-07-30 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/bond.cc: do not create empty molecules when pasting.
* libs/gcp/widgetdata.cc: do not select objects that can't exist standalone
as toplevel objects.
2010-07-28 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/widgetdata.cc: really simplify selection.
* plugins/paint/selection/lassotool.cc: ditto.
2010-07-27 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gchemutils.cc: implement SVG snapshot.
* libs/gcp/arrow.cc: ensure that links are correctly set when pasting data.
* libs/gcp/document.cc: ditto.
* libs/gcp/document.h: ditto.
* libs/gcp/electron.cc: ditto.
* libs/gcp/fragment.cc: ditto.
* libs/gcp/mechanism-arrow.cc: ditto.
* libs/gcp/mechanism-step.cc: ditto.
* libs/gcp/mesomer.cc: ditto.
* libs/gcp/mesomery-arrow.cc: ditto.
* libs/gcp/mesomery.cc: ditto.
* libs/gcp/molecule.cc: ditto.
* libs/gcp/reactant.cc: ditto.
* libs/gcp/reaction-arrow.cc: ditto.
* libs/gcp/reaction-arrow.h: ditto.
* libs/gcp/reaction-step.cc: ditto.
* libs/gcp/text.cc: ditto.
* libs/gcp/view.cc: ditto.
* libs/gcu/atom.cc: ditto.
* libs/gcu/bond.cc: ditto.
* libs/gcu/document.cc: ditto.
* libs/gcu/document.h: ditto.
* plugins/paint/templates/templatetool.cc: ditto.
2010-07-26 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/item.h: fixed typo.
* libs/gcp/arrow.cc: fixed returned value.
* libs/gcp/fragment.cc: ditto.
* libs/gcp/molecule.cc: export formal charges to OpenBabel. [#30547]
* libs/gcp/reaction-operator.h: fixed typo.
* libs/gcp/text.cc: make more objects selectable with the lasso tool.
* libs/gcp/text.h: ditto.
* libs/gcp/theme.cc: fixed crash when changing default theme font.
[see #30495]
* libs/gcu/macros.h: fixed documentation.
2010-07-25 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/arrow.cc: make more objects selectable with the lasso tool.
* libs/gcp/arrow.h: ditto.
* libs/gcp/fragment.cc: ditto.
* libs/gcp/fragment.h: ditto.
* libs/gcp/reaction-operator.cc: ditto.
* libs/gcp/reaction-operator.h: ditto.
* libs/gcp/view.cc: do not update a NULL widget. [#30495]
* libs/gcp/widgetdata.cc: fixed selection optimization.
* libs/gcr/Makefile.am: moved grid.* from programs/crystal.
* libs/gcr/grid.cc: ditto.
* libs/gcr/grid.h: ditto.
* plugins/paint/selection/lassotool.cc: fixed selection optimization.
* programs/crystal/Makefile.am: moved grid.* to libs/gcr.
* programs/crystal/grid.cc: ditto.
* programs/crystal/grid.h: ditto.
2010-07-24 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/widgetdata.cc: started work on selection optimization.
* libs/gcp/widgetdata.h: ditto.
* plugins/paint/selection/lassotool.cc: ditto.
2010-07-22 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: new UI files dirs.
* libs/gcp/theme.cc: make file name and theme name different.
* libs/gcp/theme.h: ditto.
* libs/gcu/Makefile.am: rearranged UI files.
* programs/calc/Makefile.am: ditto.
* ui/Makefile.am: ditto.
* ui/calc/Makefile.am: ditto.
* ui/calc/gchemcalc.ui: ditto.
* ui/gchemcalc.ui: ditto.
* ui/gcuperiodic.ui: ditto.
* ui/image-resolution.ui: ditto.
* ui/image-size.ui: ditto.
* ui/libgcu/Makefile.am: ditto.
* ui/print-setup.ui: ditto.
2010-07-21 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/document.cc: unselect all on undo/redo.
* plugins/paint/selection/brackets.ui: add a notebook so that the font
can be selected.
* plugins/paint/selection/lassotool.cc: make undo/redo work for partial
selection moves.
* themes/paint/Gcp-Modern: new GChemPaint theme based on ACS theme, but
with longer default bond length.
* themes/paint/Makefile.am: add new theme.
2010-07-20 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/mechanism-arrow.cc: one more undo/redo issue fixed.
* libs/gcp/mechanism-step.cc: ditto.
* libs/gcp/mechanism-step.h: ditto.
* libs/gcu/object.cc: ditto.
* libs/gcu/object.h: ditto.
2010-07-19 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/mechanism-arrow.cc: safely select curved arrows when using the
lasso tool.
* libs/gcp/mechanism-arrow.h: ditto.
* libs/gcu/object.h: ditto.
* plugins/paint/selection/lassotool.cc: ditto.
2010-07-16 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: undo/redo fixes.
* libs/gcp/bond.cc: ditto.
* libs/gcp/document.cc: ditto.
* libs/gcu/document.cc: ditto.
* plugins/paint/selection/lassotool.cc: ditto.
2010-07-15 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/selection/lassotool.cc: implement rotation and flip.
* plugins/paint/selection/lassotool.h: ditto.
2010-07-14 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: implement Atom::Move.
* libs/gcp/atom.h: ditto.
* libs/gcp/widgetdata.cc: white space.
* plugins/paint/selection/lassotool.cc: move partial selection.
* plugins/paint/selection/lassotool.h: ditto.
2010-07-13 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/bond.cc: enhance loading of invalid files.
* libs/gcu/document.cc: ditto.
* libs/gcu/document.h: ditto.
2010-07-12 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/bond.cc: fixed loading.
* libs/gcp/bond.h: ditto.
* libs/gcp/molecule.cc: ditto.
* libs/gcu/molecule.cc: set "m1" as default Id in constructors.
2010-07-11 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: do not add an invalid atom in the canvas.
* libs/gcp/bond.cc: do not add an invalid bond in the canvas.
* libs/gcp/document.cc: work on loading fixes.
* libs/gcu/application.cc: add GetApplication() static methods.
* libs/gcu/application.h: ditto.
* libs/gcu/bond.cc: do not set the atoms on loading, but wait until all
atoms are loaded.
* libs/gcu/document.cc: ditto.
* libs/gcu/object.cc: fixed a compilation warning.
* plugins/paint/selection/lassotool.cc: make copy/paste start working.
* plugins/paint/selection/lassotool.h: ditto.
2010-07-10 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/selection/lassotool.cc: select bonds if both atoms
are inside the path.
2010-07-06 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/Makefile.am: add gccv::Polygon class.
* libs/gccv/item.cc: add Item::BuildPath().
* libs/gccv/item.h: ditto.
* libs/gccv/polygon.cc: new class.
* libs/gccv/polygon.h: ditto.
* libs/gcu/atom.h: add Object::GetCoords().
* libs/gcu/object.cc: ditto.
* libs/gcu/object.h: ditto.
* plugins/paint/selection/lassotool.cc: select atoms inside the path.
* plugins/paint/selection/lassotool.h: ditto.
2010-06-28 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/selection/Makefile.am: new lasso tool.
* plugins/paint/selection/bracketstool.cc: start OnDrag() implementation.
* plugins/paint/selection/lassotool.cc: new lasso tool.
* plugins/paint/selection/lassotool.h: ditto.
* plugins/paint/selection/plugin.cc: ditto.
* plugins/paint/selection/selectiontool.cc: fixed a critical.
2010-06-27 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/document.cc: more renaming.
* libs/gcr/document.h: ditto.
* libs/gcu/element.cc: do not set locale on startup.
* mozilla-plugin/Makefile.am: make things compile again.
* mozilla-plugin/chem-viewer.cc: ditto.
* plugins/paint/selection/brackets.ui: fixed appearance.
* plugins/paint/selection/bracketstool.cc: implement properties page.
* plugins/paint/selection/bracketstool.h: ditto.
* programs/crystal/Makefile.am: make things compile again.
* programs/crystal/application.cc: ditto.
* programs/crystal/atom.cc: ditto.
* programs/crystal/atom.h: ditto.
* programs/crystal/atomsdlg.cc: ditto.
* programs/crystal/celldlg.cc: ditto.
* programs/crystal/cleavage.cc: ditto.
* programs/crystal/cleavage.h: ditto.
* programs/crystal/cleavagesdlg.cc: ditto.
* programs/crystal/document.cc: ditto.
* programs/crystal/document.h: ditto.
* programs/crystal/line.cc: ditto.
* programs/crystal/line.h: ditto.
* programs/crystal/linesdlg.cc: ditto.
* programs/crystal/view.cc: ditto.
* programs/crystal/view.h: ditto.
* programs/crystal/window.cc: ditto.
2010-06-26 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcr/Makefile.am: moved crystal related files from gcu to gcr.
(gcrystal will not compile during a few days).
* libs/gcr/atom.cc: ditto.
* libs/gcr/atom.h: ditto.
* libs/gcr/bond.cc: ditto.
* libs/gcr/bond.h: ditto.
* libs/gcr/cleavage.cc: ditto.
* libs/gcr/cleavage.h: ditto.
* libs/gcr/document.cc: ditto.
* libs/gcr/document.h: ditto.
* libs/gcr/gcrcrystalviewer.cc: ditto.
* libs/gcr/gcrcrystalviewer.h: ditto.
* libs/gcr/line.cc: ditto.
* libs/gcr/line.h: ditto.
* libs/gcr/view.cc: ditto.
* libs/gcr/view.h: ditto.
* libs/gcu/Makefile.am: ditto.
* libs/gcu/chemistry.h: ditto.
* libs/gcu/crystalatom.cc: ditto.
* libs/gcu/crystalatom.h: ditto.
* libs/gcu/crystalbond.cc: ditto.
* libs/gcu/crystalbond.h: ditto.
* libs/gcu/crystalcleavage.cc: ditto.
* libs/gcu/crystalcleavage.h: ditto.
* libs/gcu/crystaldoc.cc: ditto.
* libs/gcu/crystaldoc.h: ditto.
* libs/gcu/crystalline.cc: ditto.
* libs/gcu/crystalline.h: ditto.
* libs/gcu/crystalview.cc: ditto.
* libs/gcu/crystalview.h: ditto.
* libs/gcu/gcucrystalviewer.cc: ditto.
* libs/gcu/gcucrystalviewer.h: ditto.
* mozilla-plugin/moz-plugin.c: relicense to GPL.
* tests/Makefile.am: renamed crystal viewer test.
* tests/testgcrcrystalviewer.c: ditto.
* tests/testgcuchem3dviewer.c: relicense to GPL.
* tests/testgcucrystalviewer.c: removed.
* tests/testgcuperiodic.c: relicense to GPL.
2010-06-25 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/gcucrystalviewer.cc: use the default application to avoid a
crash.
* mozilla-plugin/chem-viewer.cc: removed an unused application.
* plugins/paint/selection/Makefile.am: add new ui file.
* plugins/paint/selection/brackets.ui: new properties page.
2010-06-24 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/Makefile.am: add new message box class.
* libs/gcu/application.cc: use gcu::Message.
* libs/gcu/dialog.cc: ditto.
* libs/gcu/message.cc: new message box class.
* libs/gcu/message.h: ditto.
* plugins/paint/selection/bracketstool.cc: start work on property page.
* plugins/paint/selection/bracketstool.h: ditto.
2010-06-23 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/Makefile.am: fix used libraries list.
* goffice/gogcpwin.cc: always update bounds.
* libs/gcu/application.cc: fix a NULL pointer issue.
2010-06-19 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: add a new libgcr library.
* docs/reference/Doxyfile.in: ditto.
* goffice/Makefile.am: start adding support for crystal structures.
* goffice/gchemutils.cc: ditto.
* goffice/gogcpwin.cc: ditto.
* goffice/gogcpwin.h: ditto.
* goffice/gogcrystalapp.cc: ditto.
* goffice/gogcrystalapp.h: ditto.
* goffice/gogcrystalwin.cc: ditto.
* goffice/gogcrystalwin.h: ditto.
* goffice/plugin.xml.in: ditto.
* libs/Makefile.am: add a new libgcr library.
* libs/gcr/Makefile.am: ditto.
* libs/gcr/window.cc: ditto.
* libs/gcr/window.h: ditto.
* libs/gcu/chemistry.h: ditto.
2010-06-15 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/atoms/orbital.cc: fix orbital code when the atom is inside
a fragment. [#29862]
2010-06-11 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/loaders/cdxml/cdxml.cc: use gcu::Application::CreateObject().
* plugins/loaders/cif/cif.cc: ditto.
* plugins/loaders/cml/cml.cc: ditto.
2010-06-05 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: use gcu::Application::CreateObject().
* libs/gcp/document.cc: ditto.
* libs/gcp/fragment-residue.cc: ditto.
* libs/gcp/residue.cc: ditto.
* libs/gcp/residue.h: ditto.
* libs/gcu/application.cc: ditto.
* libs/gcu/application.h: ditto.
* libs/gcu/chem3ddoc.cc: ditto.
* libs/gcu/gcucrystalviewer.cc: ditto.
* libs/gcu/molecule.cc: ditto.
* libs/gcu/object.cc: ditto.
* libs/gcu/object.h: ditto.
* libs/gcu/residue.cc: ditto.
* libs/gcu/residue.h: ditto.
* plugins/loaders/cdx/cdx.cc: ditto.
* plugins/paint/arrows/plugin.cc: ditto.
* plugins/paint/atoms/plugin.cc: ditto.
* plugins/paint/residues/plugin.cc: ditto.
* plugins/paint/residues/residues-dlg.cc: ditto.
* plugins/paint/selection/plugin.cc: ditto.
* programs/calc/gchemcalc.cc: ditto.
* programs/crystal/application.cc: ditto.
2010-06-04 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/application.cc: make object creation a per application mechanism.
* libs/gcu/application.h: ditto.
* libs/gcu/document.cc: ditto.
* libs/gcu/document.h: ditto.
* libs/gcu/object.cc: ditto.
* libs/gcu/object.h: ditto.
* plugins/paint/residues/plugin.cc: ditto.
2010-05-30 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/crystaldoc.cc: mix rhombohedral with hexagonal to be more or
less consistent with cif files.
* libs/gcu/spacegroup.cc: accept negative and decimal values in transforms.
* plugins/loaders/cif/cif.cc: fixed some more files import.
* programs/crystal/celldlg.cc: mix rhombohedral with hexagonal to be more or
less consistent with cif files.
2010-05-26 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/Makefile.am: fixed build with LDFLAGS="-Wl,--no-undefined".
[#29966]
* libs/gcp/Makefile.am: ditto. (patch from Funda Wang)
* libs/gcu/Makefile.am: ditto. (patch from Funda Wang)
* plugins/loaders/cdx/Makefile.am: ditto.
* plugins/loaders/cdxml/Makefile.am: ditto.
* plugins/loaders/cif/Makefile.am: ditto.
* plugins/loaders/cml/Makefile.am: ditto.
* plugins/paint/arrows/Makefile.am: ditto.
* plugins/paint/atoms/Makefile.am: ditto.
* plugins/paint/bonds/Makefile.am: ditto.
* plugins/paint/cycles/Makefile.am: ditto.
* plugins/paint/residues/Makefile.am: ditto.
* plugins/paint/selection/Makefile.am: ditto.
* plugins/paint/templates/Makefile.am: ditto.
* plugins/paint/text/Makefile.am: ditto.
* plugins/paint/wikipedia/Makefile.am: ditto.
2010-05-13 Daniel Leidert <daniel.leidert@wgdd.de>
* libs/gcu/gcucrystalviewer.cc: Fixed typo.
2010-05-13 Daniel Leidert <daniel.leidert@wgdd.de>
* plugins/paint/*/Makefile.am: Fixed uidir - 's#.ui#/ui#g'.
* programs/crystal/gcrystal.desktop.in.in (MimeType): Fixed field -
must end with a semicolon.
* programs/3d/gchem3d.desktop.in.in (MimeType): Ditto.
* programs/paint/gchempaint.desktop.in.in (MimeType): Ditto. Removed
duplicated entry.
2010-05-13 Jean Bréfort <jean.brefort@normalesup.org>
* autogen.sh: now calls configure.
* plugins/paint/selection/plugin.cc: show brackets tool button.
* programs/crystal/Makefile.am: add new files.
* programs/crystal/grid.cc: new grid widget.
* programs/crystal/grid.h: ditto.
2010-05-12 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post branching version bump (0.13.0).
2010-05-12 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: set version to 0.12.0.
* libs/gcp/fragment.cc: fix loading old fragment nodes.
* plugins/paint/text/fragmenttool.cc: add more shortcuts.
* plugins/paint/text/texttool.cc: ditto.
2010-05-09 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/document.cc: fix loading of new fragment nodes.
* libs/gcp/document.h: ditto.
* libs/gcp/fragment.cc: ditto.
* libs/gcp/theme.cc: do not delete a theme twice.
* libs/gcp/theme.h: ditto.
* libs/gcp/tool.cc: do not access a destroyed widget.
* plugins/paint/selection/selectiontool.cc: ditto.
* plugins/paint/selection/selectiontool.h: ditto.
* plugins/paint/text/texttool.cc: fixed a font size issue.
2010-05-08 Jean Bréfort <jean.brefort@normalesup.org>
* docs/reference/Doxyfile.in: do not document empty files.
* libs/gccv/group.h: fixed API documentation.
* libs/gccv/hash.h: ditto.
* libs/gcp/bond.h: ditto.
* libs/gcp/mesomery-arrow.h: ditto.
* libs/gcp/newfiledlg.h: ditto.
* libs/gcp/preferences.h: ditto.
* libs/gcp/reaction-arrow.h: ditto.
* libs/gcp/view.h: ditto.
* libs/gcu/chemistry.h: ditto.
* libs/gcu/loader-error.h: ditto.
* programs/3d/gchem3d.desktop.in.in: add some mime types.
* programs/crystal/gcrystal.desktop.in.in: ditto.
* programs/paint/gchempaint.desktop.in.in: ditto.
2010-05-07 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.11.99).
* libs/gcp/mechanism-arrow.h: typo in API documentation.
2010-05-04 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: update version to 0.11.98.
2010-05-04 Jean Bréfort <jean.brefort@normalesup.org>
* database/space-groups.xml.in: fixed group 205 Hall name.
* libs/gccv/text.cc: fixed memory leaks.
* libs/gcp/mechanism-arrow.cc: ditto.
* libs/gcp/text-object.cc: ditto.
* libs/gcu/spacegroup.cc: fixed group search when the Hall name is a
duplicate (groups 3 and 68).
* programs/crystal/application.cc: add cif and cml to recent files.
* programs/crystal/application.h: ditto.
* programs/crystal/window.cc: ditto.
2010-05-02 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text-tag.cc: fixed memory leaks.
* libs/gccv/text.cc: ditto.
* libs/gcp/application.cc: ditto.
* libs/gcp/fontsel.cc: ditto.
* libs/gcp/operation.cc: ditto.
* libs/gcp/preferences.cc: ditto.
* libs/gcp/view.cc: ditto.
* libs/gcu/chain.cc: ditto.
* libs/gcu/element.cc: ditto.
* libs/gcu/filechooser.cc: ditto.
* plugins/paint/text/texttool.cc: ditto.
2010-05-01 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/view.cc: fixed memory leaks.
* libs/gcu/filechooser.cc: ditto.
* libs/gcu/spectrumdoc.cc: ditto.
* libs/gcu/spectrumview.cc: ditto.
* programs/3d/main.cc: ditto.
* programs/3d/window.cc: ditto.
* programs/calc/gchemcalc.cc: ditto.
* programs/crystal/main.cc: ditto.
* programs/crystal/window.cc: ditto.
* programs/paint/main.cc: ditto.
* programs/spectra/document.cc: ditto.
* programs/spectra/gspectrum.cc: ditto.
* programs/spectra/window.cc: ditto.
* programs/table/gchemtable-app.cc: ditto.
* programs/table/gchemtable-curve.cc: ditto.
2010-04-30 Jean Bréfort <jean.brefort@normalesup.org>
* docs/man/gchempaint.1: fixed command line options documentation.
* libs/gcp/application.cc: fixed memory leaks.
* libs/gcp/atom.cc: removed a not anymore used variable.
* libs/gcp/theme.cc: fixed memory leaks.
* libs/gcp/view.cc: ditto.
* libs/gcp/window.cc: ditto.
* libs/gcu/chain.cc: ditto.
* libs/gcu/element.cc: ditto.
* libs/gcu/molecule.h: ditto.
* libs/gcu/residue.cc: ditto.
* plugins/paint/templates/plugin.cc: ditto.
2010-04-29 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/arrow.cc: fixed valgrind warnings.
* libs/gccv/bezier-arrow.cc: ditto.
* libs/gccv/item.cc: ditto.
* libs/gccv/item.h: ditto.
* libs/gccv/line.cc: ditto.
* libs/gccv/poly-line.cc: ditto.
* libs/gccv/squiggle.cc: ditto.
* libs/gccv/wedge.cc: ditto.
* libs/gcp/atom.cc: ditto.
* libs/gcp/bond.cc: ditto.
* libs/gcp/mechanism-arrow.h: API documentation work.
* libs/gcp/tool.cc: fixed valgrind warnings.
* libs/gcp/view.h: API documentation work.
* libs/gcp/widgetdata.cc: removed gcp::cleared.
* libs/gcp/widgetdata.h: API documentation work.
* plugins/paint/text/fragmenttool.cc: removed gcp::cleared.
* plugins/paint/text/texttool.cc: ditto.
2010-04-28 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/fragment-atom.h: API documentation work.
* libs/gcp/mechanism-arrow.h: ditto.
* libs/gcp/mechanism-step.h: ditto.
* libs/gcp/mesomer.h: ditto.
* libs/gcp/mesomery-arrow.h: ditto.
* libs/gcp/mesomery.h: ditto.
* libs/gcp/reactant.h: ditto.
* libs/gcp/reaction-arrow.h: ditto.
* libs/gcp/reaction-operator.h: ditto.
* libs/gcp/reaction-prop.h: ditto.
* libs/gcp/reaction-step.h: ditto.
* libs/gcp/reaction.h: ditto.
* libs/gcp/text-editor.h: ditto.
* libs/gcp/text.h: ditto.
* libs/gcp/tool.h: ditto.
2010-04-27 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.h: API documentation work.
* libs/gcp/fragment.h: ditto.
* libs/gcu/crystalatom.cc: survive CIF files with no space group and/or
invalid atoms.
* libs/gcu/crystaldoc.cc: ditto.
* plugins/loaders/cif/cif.cc: ditto.
2010-04-26 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.11.91).
* docs/*: documentation updates.
* libs/gcp/about.cc: fixed program name.
* libs/gcp/application.h: API documentation work.
* libs/gcp/atom.h: ditto.
* libs/gcp/electron.h: ditto.
* libs/gcp/fragment-atom.h: ditto.
* libs/gcu/crystaldoc.h: ditto.
* libs/gcu/spacegroup.h: ditto.
* libs/gcu/transform3d.h: ditto.
* libs/gcu/ui-builder.h: ditto.
* libs/gcu/value.h: ditto.
* libs/gcu/vector.h: ditto.
* programs/3d/window.cc: fixed program name.
* programs/calc/gchemcalc.cc: ditto.
* programs/crystal/window.cc: ditto.
* programs/spectra/window.cc: ditto.
* programs/table/gchemtable-app.cc: ditto.
2010-04-25 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: fixed typo.
* libs/gcp/text.cc: ditto.
* libs/gcu/application.cc: made default window mode really private.
* libs/gcu/application.h: ditto and API documentation work.
* libs/gcu/atom.h: API documentation work.
* libs/gcu/bond.h: ditto.
* libs/gcu/chain.h: ditto.
* libs/gcu/chem3ddoc.h: ditto.
* libs/gcu/crystaldoc.h: ditto.
* libs/gcu/cycle.h: ditto.
* libs/gcu/document.h: ditto.
* libs/gcu/element.cc: add chinese to langs.
* libs/gcu/element.h: API documentation work.
* libs/gcu/formula.h: ditto.
* libs/gcu/loader-error.h: ditto.
* libs/gcu/matrix.h: ditto.
* libs/gcu/molecule.h: ditto.
* libs/gcu/print-setup-dlg.h: ditto.
* libs/gcu/spacegroup.h: ditto.
* libs/gcu/structs.h: ditto.
* libs/gcu/value.h: ditto.
* libs/gcu/vector.h: ditto.
* plugins/paint/arrows/curvedarrowtool.ui: fixed typo.
* programs/3d/gchem3d.desktop.in.in: ditto.
* programs/calc/gchemcalc.desktop.in.in: ditto.
* programs/crystal/gcrystal.desktop.in.in: ditto.
* programs/paint/gchempaint.desktop.in.in: ditto.
* programs/spectra/gspectrum.desktop.in.in: ditto.
* programs/table/gchemtable-app.cc: ditto.
* programs/table/gchemtable.desktop.in.in: ditto.
* ui/paint/preferences.ui: ditto.
2010-04-24 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text-tag.h: API documentation work.
2010-04-23 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/*: user help updated.
* libs/gccv/group.h: API documentation work.
* libs/gccv/leaf.h: ditto.
* libs/gccv/line-item.h: ditto.
* libs/gccv/line.h: ditto.
* libs/gccv/poly-line.h: ditto.
* libs/gccv/rectangle.h: ditto.
* libs/gccv/squiggle.h: ditto.
* libs/gccv/text-client.h: ditto.
* libs/gccv/text-tag.h: ditto.
* libs/gccv/text.h: ditto.
* libs/gccv/wedge.h: ditto.
* libs/gcp/window.cc: fix icon.
* libs/gcu/dialog.cc: add Dialog::SetRealName().
* libs/gcu/dialog.h: ditto.
* programs/3d/application.cc: fix default window title.
* programs/3d/window.cc: fix icon.
* programs/calc/gchemcalc.cc: fix icon.
* programs/spectra/window.cc: fix icon.
* programs/table/gchemtable-app.cc: fix curves related issues and add new
pre-defined curves in menus.
* programs/table/gchemtable-curve.cc: fix curves related issues.
* programs/table/gchemtable-elt.cc: fix curves related issues.
2010-04-22 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/table/C/gchemtable.xml: user help updated.
* libs/gccv/bezier-arrow.h: API documentation work.
* libs/gccv/circle.h: ditto.
* libs/gccv/leaf.h: ditto.
* libs/gccv/line.h: ditto.
* libs/gccv/poly-line.h: ditto.
* libs/gccv/rectangle.h: ditto.
* libs/gccv/squiggle.h: ditto.
* libs/gccv/wedge.h: ditto.
* programs/table/gchemtable-app.cc: fixed window icon.
2010-04-21 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/crystal/C/gcrystal.xml: user help updated.
* libs/gccv/leaf.cc: fixed typo in comment.
* libs/gccv/leaf.h: API documentation work.
* libs/gccv/line-item.h: ditto.
* libs/gcu/crystaldoc.cc: force space group detection for old files.
* programs/crystal/application.cc: never end with en empty recent file
entry.
* programs/crystal/celldlg.cc: fixed a space group related issue.
* programs/crystal/document.cc: kill open dialogs when loading a file.
2010-04-19 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/calc/C/gchemcalc.xml: user help updated.
* docs/help/3d/C/gchem3d.xml: ditto.
* docs/help/paint/C/gchempaint.xml: ditto.
* docs/help/spectra/C/gspectrum.xml: ditto.
* libs/gccv/bezier-arrow.h: API documentation work.
* libs/gccv/circle.h: ditto.
* libs/gccv/fill-item.h: ditto.
* libs/gccv/group.h: ditto.
* libs/gccv/hash.h: ditto.
* libs/gccv/item.h: ditto.
* libs/gccv/text-client.h: ditto.
* libs/gccv/wedge.h: ditto.
* libs/gcp/text-object.h: ditto.
* libs/gcu/document.h: ditto.
* libs/gcu/gcuchem3dviewer.h: ditto.
* libs/gcu/spectrumdoc.cc: accept more spectrum type strings such as
"UV/VIS SPECTRUM".
2010-04-18 Jean Bréfort <jean.brefort@normalesup.org>
* database/elements.xml.in: use Cn and Copernicium for element 112.
2010-04-18 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/paint/C/gchempaint.xml: user help updated.
* libs/gccv/arrow.h: API documentation work.
* libs/gccv/bezier-arrow.h: ditto.
* libs/gccv/canvas.h: ditto.
* libs/gccv/circle.h: ditto.
* libs/gccv/client.h: ditto.
* plugins/paint/bonds/bondtool.cc: fixed down bond tool button appearance
when configuration changes.
* plugins/paint/bonds/bondtool.h: ditto.
2010-04-17 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/paint/C/gchempaint.xml: more help updating.
* libs/gccv/arrow.h: API documentation work.
* libs/gccv/bezier-arrow.h: ditto.
* libs/gccv/item.h: fixed GCCV_ITEM_* macros.
* libs/gcp/document.cc: fixed one more undo/redo issue.
2010-04-16 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/paint/C/gchempaint.xml: more help updating.
* libs/gccv/arrow.h: API documentation work.
* libs/gccv/item.h: ditto.
* libs/gccv/line-item.h: ditto.
* libs/gccv/line.h: ditto.
* plugins/paint/arrows/curvedarrowtool.h: add GetHelpTag().
* plugins/paint/atoms/orbital.cc: fixed an undo/redo issue.
2010-04-15 Jean Bréfort <jean.brefort@normalesup.org>
* docs/reference/Doxyfile.in: minor update.
* docs/help/paint/C/gchempaint.xml: more help updating.
* libs/gccv/arrow.h: API documentation work.
* libs/gccv/item-client.h: ditto.
* libs/gccv/item.h: ditto.
* libs/gcp/operation.cc: minor typography update.
* plugins/paint/atoms/orbital-prop.ui: fixed help button position.
* plugins/paint/atoms/orbital.cc: don't crash when closing the properties
box. [#29559]
2010-04-14 Jean Bréfort <jean.brefort@normalesup.org>
* README: updated for 0.12.
* configure.ac: post release version bump (0.11.91).
* docs/help/paint/C/gchempaint.xml: some updates.
* libs/gccv/structs.h: API docs.
* libs/gcp/about.cc: updated copyright.
* libs/gcp/bond.cc: cleaned out obsolete code.
* libs/gcp/tool.cc: fixed cursor after deactivation.
* libs/gcu/print-setup-dlg.cc: fixed footer widgets sensitivity.
* programs/3d/window.cc: updated copyright.
* programs/calc/gchemcalc.cc: ditto.
* programs/crystal/window.cc: ditto.
* programs/spectra/window.cc: ditto.
* programs/table/gchemtable-app.cc: ditto.
2010-04-13 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: change version to 0.11.90.
* database/Makefile.am: change space-groups.xml to space-groups.xml.in.
* database/space-groups.xml: ditto.
* libs/gccv/arrow.cc: fixed compilation warnings.
* libs/gccv/circle.cc: ditto.
* libs/gccv/client.cc: ditto.
* libs/gccv/hash.cc: ditto.
* libs/gccv/item-client.cc: ditto.
* libs/gccv/item.cc: ditto.
* libs/gccv/line.cc: ditto.
* libs/gccv/poly-line.cc: ditto.
* libs/gccv/rectangle.cc: ditto.
* libs/gccv/squiggle.cc: ditto.
* libs/gccv/text.cc: ditto.
* libs/gccv/wedge.cc: ditto.
* libs/gcp/fragment.cc: fixed charge checking.
* libs/gcp/text-object.cc: fixed cursor position after undo/redo.
* libs/gcp/text.cc: ditto.
* libs/gcp/tool.cc: fixed compilation warnings.
* plugins/paint/atoms/orbitaltool.cc: ditto.
* plugins/paint/text/fragmenttool.cc: ditto.
* plugins/paint/text/texttool.cc: restore chemistry into texts pasting.
2010-04-12 Jean Bréfort <jean.brefort@normalesup.org>
* database/Makefile.am: add space groups from BODR since the original is
a bit buggy.
* database/space-groups.xml: ditto.
* libs/gcu/crystaldoc.cc: add an auto flag for the sapece group.
* libs/gcu/crystaldoc.h: ditto.
* libs/gcu/spacegroup.cc: load groups from our database, not BODR.
* programs/crystal/celldlg.cc: manage space group.
* programs/crystal/celldlg.h: ditto.
* programs/crystal/main.cc: fixed key limits.
* ui/crystal/cell.ui: manage space group.
2010-04-11 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: fixed various issues.
* libs/gcp/mechanism-arrow.cc: fix positions for single electron moves.
* plugins/paint/arrows/curvedarrowtool.cc: ditto.
2010-04-10 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/bond.cc: adjust curved arrows positions relative to stereo
and multiple bonds.
* libs/gcp/bond.h: ditto.
* libs/gcp/mechanism-arrow.cc: ditto.
* libs/gcu/application.cc: ditto.
* plugins/paint/arrows/curvedarrowtool.cc: ditto.
2010-04-05 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: implement curved arrow support in mesomery and
fixed various issues.
* libs/gcp/mechanism-arrow.cc: ditto.
* libs/gcp/mechanism-arrow.h: ditto.
* libs/gcp/mesomer.cc: ditto.
* libs/gcp/mesomer.h: ditto.
* libs/gcp/mesomery.cc: ditto.
* libs/gcp/reaction-step.h: ditto.
* plugins/paint/arrows/curvedarrowtool.cc: ditto.
2010-04-04 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: enhance support for curved arrows in reactions.
* libs/gcp/document.cc: ditto.
* libs/gcp/mechanism-step.cc: ditto.
* libs/gcp/mechanism-step.h: ditto.
* libs/gcp/reaction-arrow.cc: ditto.
* libs/gcp/reaction-step.cc: ditto.
* libs/gcp/reaction-step.h: ditto.
* libs/gcp/reaction.cc: ditto.
* plugins/paint/selection/selectiontool.cc: ditto.
2010-04-03 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/mechanism-arrow.cc: don't add more than one item.
* libs/gcp/reaction-step.cc: fix several issues with curved arrows
inside reactions.
2010-03-31 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/bezier-arrow.cc: implement control points dragging.
* libs/gcp/atom.cc: add Atom::GetBondAtAngle().
* libs/gcp/atom.h: ditto.
* libs/gcp/mechanism-arrow.cc: hide control points when unselecting.
* libs/gcp/tool.h: fixed doc typo.
* plugins/paint/arrows/curvedarrowtool.cc: arrow control points edition.
* plugins/paint/arrows/curvedarrowtool.h: ditto.
2010-03-29 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/mechanism-arrow.cc: allow electrons as source.
* plugins/paint/arrows/curvedarrowtool.cc: more work on electrons as
sources.
* plugins/paint/arrows/curvedarrowtool.h: ditto.
2010-03-28 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/electron.h: doc typo.
* plugins/paint/arrows/curvedarrowtool.cc: start work on curved arrow
starting from an electron or electrons pair.
2010-03-27 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/mechanism-arrow.cc: enhanced arrow positions.
* plugins/paint/arrows/curvedarrowtool.cc: ditto.
2010-03-24 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/theme.cc: fixed configuration issues when using a key file.
* programs/3d/main.cc: ditto.
* programs/crystal/main.cc: ditto.
* ui/crystal/view-settings.ui: fixed minimum FoV.
2010-03-23 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/mechanism-arrow.cc: implement the end at center feature.
* plugins/paint/arrows/curvedarrowtool.cc: still more work on the
end position.
2010-03-22 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/mechanism-arrow.cc: implement the end position option.
* libs/gcp/mechanism-arrow.h: ditto.
* plugins/paint/arrows/curvedarrowtool.cc: more work on the end position
(still not working).
* plugins/paint/arrows/curvedarrowtool.h: ditto.
* plugins/paint/arrows/curvedarrowtool.ui: ditto.
* plugins/paint/arrows/gchempaint-arrows.schemas.in: ditto.
2010-03-21 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/arrows/Makefile.am: add a property page to the curved
arrow tool.
* plugins/paint/arrows/curvedarrowtool.cc: ditto.
* plugins/paint/arrows/curvedarrowtool.h: ditto.
* plugins/paint/arrows/curvedarrowtool.ui: ditto.
2010-03-15 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/arrows/curvedarrowtool.cc: various improvements.
2010-03-13 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/arrow.cc: Use gcu::ReadFloat() and gcu::WriteFloat() for
serialization.
* libs/gcp/fragment.cc: use the fragment as client for the charge item.
* libs/gcu/xml-utils.cc: make gcu::WriteFloat() locale independant.
* plugins/paint/arrows/curvedarrowtool.cc: fixed orientation of arrows
at start.
2010-03-12 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: Fixed typo.
* libs/gcu/crystalatom.cc: don't crash if atomic numer is 0.
* libs/gcu/xml-utils.cc: one more fix in ReadFloat().
* plugins/loaders/cif/cif.cc: fixed an atom_label issue.
* plugins/paint/residues/residues-dlg.cc: use the same user residues as
the library (don't have a duplicated symbol).
2010-03-11 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/bezier-arrow.cc: fixed bounds.
2010-03-10 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: modernize a bit.
* libs/gcu/xml-utils.cc: fixed ReadFloat().
* plugins/paint/arrows/curvedarrowtool.cc: implement bond to non adjacent
atom.
* plugins/paint/arrows/curvedarrowtool.h: ditto.
2010-02-27 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.11.6).
2010-02-27 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/circle.cc: fixed distance evaluation.
* libs/gcp/atom.cc: don't crash in destructor.
* libs/gcu/dialog-owner.cc: reverse previous change (don't belong
to this class).
* libs/gcu/dialog-owner.h: ditto.
* libs/gcu/dialog.cc: add Dialog::SetTransientFor().
* libs/gcu/dialog.h: ditto.
* libs/gcu/object.cc: make properties dialogs work.
* libs/gcu/object.h: ditto.
* plugins/paint/atoms/Makefile.am: add orbital-tool.ui.
* plugins/paint/atoms/orbital-prop.ui: fixed some issues.
* plugins/paint/atoms/orbital.cc: implement properties dialog and contextual
menu.
* plugins/paint/atoms/orbital.h: ditto.
2010-02-26 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/dialog-owner.cc: start wrking on generic properties dialogs
for objects.
* libs/gcu/dialog-owner.h: ditto.
* libs/gcu/object.cc: ditto.
* libs/gcu/object.h: ditto.
* plugins/paint/arrows/curvedarrowtool.cc: implement atom to atom.
* plugins/paint/atoms/orbital-prop.ui: new properties dialog for orbitals.
* plugins/paint/atoms/orbital.cc: ditto.
* plugins/paint/atoms/orbital.h: ditto.
2010-02-25 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/electron.cc: use different nales for single electron and
electron pair.
* libs/gcp/fragment.cc: fixed some stoichiometry and charge issues.
2010-02-24 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/fragment.cc: do not chage atom position to negative values
(actually huge values since it is unsigned).
* plugins/paint/selection/erasertool.cc: don't crash when deleting a
fragment.
2010-02-23 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: add contextual menus for children.
* libs/gcp/electron.cc: set a default Id.
* libs/gcp/view.cc: ensure that deleted object ar removed from the
selection list.
* plugins/paint/atoms/chargetool.cc: fix position for unwanted
orientations.
2010-02-22 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: add a localizable identity to objects.
* libs/gcp/arrow.cc: ditto.
* libs/gcp/arrow.h: ditto.
* libs/gcp/docprop.cc: ditto.
* libs/gcp/docprop.h: ditto.
* libs/gcp/electron.cc: ditto.
* libs/gcp/electron.h: ditto.
* libs/gcp/fragment.cc: ditto.
* libs/gcp/fragment.h: ditto.
* libs/gcp/mechanism-arrow.cc: ditto.
* libs/gcp/mechanism-arrow.h: ditto.
* libs/gcp/mechanism-step.cc: ditto.
* libs/gcp/mechanism-step.h: ditto.
* libs/gcp/mesomer.cc: ditto.
* libs/gcp/mesomer.h: ditto.
* libs/gcp/mesomery-arrow.cc: ditto.
* libs/gcp/mesomery-arrow.h: ditto.
* libs/gcp/mesomery.cc: ditto.
* libs/gcp/mesomery.h: ditto.
* libs/gcp/reactant.cc: fixed critical reaction stoichiometry issues.
* libs/gcp/reactant.h: add a localizable identity to objects.
* libs/gcp/reaction-arrow.cc: ditto.
* libs/gcp/reaction-arrow.h: ditto.
* libs/gcp/reaction-operator.cc: ditto.
* libs/gcp/reaction-operator.h: ditto.
* libs/gcp/reaction-prop.cc: ditto.
* libs/gcp/reaction-prop.h: ditto.
* libs/gcp/reaction-step.cc: ditto.
* libs/gcp/reaction-step.h: ditto.
* libs/gcp/reaction.cc: ditto.
* libs/gcp/reaction.h: ditto.
* libs/gcp/text.cc: ditto.
* libs/gcp/text.h: ditto.
* libs/gcu/atom.cc: ditto.
* libs/gcu/atom.h: ditto.
* libs/gcu/bond.cc: ditto.
* libs/gcu/bond.h: ditto.
* libs/gcu/chain.cc: ditto.
* libs/gcu/chain.h: ditto.
* libs/gcu/cycle.cc: ditto.
* libs/gcu/cycle.h: ditto.
* libs/gcu/document.cc: ditto.
* libs/gcu/document.h: ditto.
* libs/gcu/molecule.cc: ditto.
* libs/gcu/molecule.h: ditto.
* libs/gcu/object.cc: ditto.
* libs/gcu/object.h: ditto.
* plugins/paint/arrows/retrosynthesis.cc: ditto.
* plugins/paint/arrows/retrosynthesis.h: ditto.
* plugins/paint/arrows/retrosynthesisarrow.cc: ditto.
* plugins/paint/arrows/retrosynthesisarrow.h: ditto.
* plugins/paint/arrows/retrosynthesisstep.cc: ditto.
* plugins/paint/arrows/retrosynthesisstep.h: ditto.
* plugins/paint/atoms/orbital.cc: ditto.
* plugins/paint/atoms/orbital.h: ditto.
* plugins/paint/selection/erasertool.cc: ditto.
* plugins/paint/selection/group.cc: ditto.
* plugins/paint/selection/group.h: ditto.
* plugins/paint/text/texttool.cc: fixed critical reaction stoichiometry
issues.
* plugins/paint/text/texttool.h: ditto.
* programs/crystal/celldlg.cc: fixed copyright.
* ui/crystal/cell.ui: fixed duplicate Ids.
2010-02-21 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/line.cc: fixed for vector targets not supporting transparency.
* libs/gcp/bond.cc: correctly pack crossing bonds.
* libs/gcp/electron.cc: move item to front of its group.
* libs/gcp/widgetdata.cc: change WidgetData::SetSelected() signature to
allow for more states.
* libs/gcp/widgetdata.h: ditto.
* plugins/paint/selection/erasertool.cc: implement OnMotion().
* plugins/paint/selection/erasertool.h: ditto.
2010-02-20 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: new Atom::GetRelativePosition() method.
* libs/gcp/atom.h: ditto.
* libs/gcp/electron.cc: make the item a child of the atom item.
* plugins/paint/atoms/elementtool.cc: set the text color, not the
background.
* plugins/paint/selection/erasertool.cc: fixed undo when deleting an
atom child.
2010-02-19 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/gcuperiodic.c (on_clicked): use gtk_buildable_get_name.
2010-02-17 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/group.cc: allow better selection.
* libs/gccv/leaf.cc: partially implemented Leaf::Distance().
* libs/gcp/atom.cc: fix some children related issues.
* libs/gcp/electron.cc: set the client for all items.
* plugins/paint/atoms/orbital.cc: implement Orbital::SetSelected().
2010-02-16 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: fixed custom charge position dieplay.
* plugins/paint/atoms/orbital.cc: update copyright.
* plugins/paint/atoms/orbital.h: ditto.
* plugins/paint/atoms/orbitaltool.cc: implement preview.
* plugins/paint/atoms/orbitaltool.h: ditto.
2010-02-15 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/leaf.cc: fixed size to something more logical.
* plugins/paint/atoms/orbital.cc: implement d orbitals and orbital rotation.
* plugins/paint/atoms/orbital.h: ditto.
* plugins/paint/atoms/orbital.ui: ditto.
* plugins/paint/atoms/orbitaltool.cc: ditto.
* plugins/paint/atoms/orbitaltool.h: ditto.
2010-02-14 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/Makefile.am: delete lemniscate, add leaf.
* libs/gccv/leaf.cc: new file.
* libs/gccv/leaf.h: ditto.
* libs/gccv/lemniscate.cc: deleted.
* libs/gccv/lemniscate.h: ditto.
* plugins/paint/atoms/orbital.cc: add support for p type atomic orbitals.
* plugins/paint/atoms/orbitaltool.cc: ditto.
* programs/calc/gchemcalc.cc: fixed icon name.
2010-02-08 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/view.cc: cleaned out deprecated and commented out code.
* mozilla-plugin/chem-viewer.cc: fixed issues with chemdraw files support.
* mozilla-plugin/moz-plugin.c: ditto.
2010-02-07 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/view.cc: better fix for high resolution bitmaps.
* libs/gcu/crystaldoc.cc: do not use a NULL space group.
* plugins/loaders/cif/cif.cc: fixed reading invalid loops and support
unkown space groups.
2010-02-05 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/view.cc: fixed high resolution bitmap export.
* libs/gcu/crystaldoc.cc: initialize size in constructor.
* libs/gcu/crystaldoc.h: make Reinit public.
* libs/gcu/gcucrystalviewer.cc: new load from uri functions (cif files only
for now).
* libs/gcu/gcucrystalviewer.h: ditto.
* mozilla-plugin/chem-viewer.cc: make cif files work.
2010-02-05 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: fixed mozilla related issues.
2010-01-27 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: add a menu item to hide atomic formal charge.[#26735]
* libs/gcp/atom.h: ditto.
2010-01-19 Jean Bréfort <jean.brefort@normalesup.org>
* all files: renamed all widgets from Gtk* to Gcu*.
2010-01-13 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/mechanism-arrow.cc: implement AddItem when the source is an atom.
* plugins/paint/arrows/curvedarrowtool.cc: fixed bond to bond and made some
work on atom to adjacent bond.
* plugins/paint/arrows/curvedarrowtool.h: add new unimplemented methods.
2010-01-12 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/bonds/chaintool.cc: fixed OnDrag().
2010-01-11 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: catch LoaderError and display a message box
instead of crashing.
2010-01-10 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: allow for forward references to atoms in cdx
files. [#28515]
* libs/gcu/bond.cc: ditto.
* libs/gcu/bond.h: ditto.
* libs/gcu/document.cc: ditto.
* libs/gcu/document.h: ditto.
* plugins/paint/arrows/curvedarrowtool.cc: added missing break.
2010-01-07 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/loaders/cif/cif.cc: fix some crashes on import.
2010-01-06 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: make build success with GNU gold ld. [#28479]
* mozilla-plugin/Makefile.am: ditto.
* programs/3d/Makefile.am: ditto.
* programs/calc/Makefile.am: ditto.
* programs/crystal/Makefile.am: ditto.
* programs/crystal/application.cc: pass the valid document to the loader
(fixes CIF files loading).
* programs/paint/Makefile.am: make build success with GNU gold ld..
* programs/spectra/Makefile.am: ditto.
* programs/table/Makefile.am: ditto.
* tests/Makefile.am: ditto.
2010-01-05 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/canvas.cc: fixed invalidated area.
* plugins/paint/arrows/curvedarrowtool.cc: fixed arrow end position in
bond to bond case.
2010-01-04 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: fixed one more selection issue.
* libs/gcp/fragment.cc: don't loose the main symbol when deleting text
before it.
* plugins/paint/text/texttool.cc: fixed a clipboard issue.
2010-01-03 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/document.cc: enhance portability.
* plugins/paint/arrows/curvedarrowtool.cc: fixed test for bond to bond case.
* plugins/paint/wikipedia/wikipediatool.cc: enhance portability.
2010-01-03 Daniel Leidert <daniel.leidert@wgdd.de>
* libs/gcp/reaction-prop.cc: Fixed typo.
2010-01-02 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/atoms/orbital.ui: started work on p and d orbitals.
* plugins/paint/atoms/orbitaltool.cc: ditto.
* plugins/paint/atoms/orbitaltool.h: ditto.
2010-01-01 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.11.5).
* libs/gcp/tool.cc: don't allow clipboard operations by default.
* plugins/paint/arrows/curvedarrowtool.cc: unselect all on click.
* plugins/paint/atoms/orbital.cc: fixed copyright years.
* plugins/paint/atoms/orbital.h: ditto.
* plugins/paint/atoms/orbitaltool.cc: unselect all on click.
* plugins/paint/atoms/orbitaltool.h: fixed copyright years.
* plugins/paint/selection/selectiontool.h: allow clipboard operations.
2009-12-31 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/canvas.cc: add support for leave-notify-event.
* libs/gccv/client.cc: ditto.
* libs/gccv/client.h: ditto.
* libs/gccv/hash.cc: do not call cairo_reset_clip to avoid issues with
client side gtk+.
* libs/gcp/tool.cc: add support for leave-notify-event.
* libs/gcp/tool.h: ditto.
* libs/gcp/view.cc: ditto.
* libs/gcp/view.h: ditto.
* plugins/paint/arrows/curvedarrowtool.cc: select potential source when
moving the mouse to make clear from where the arrow would start.
* plugins/paint/arrows/curvedarrowtool.h: ditto.
* plugins/paint/atoms/orbitaltool.cc: implement OnDrag and ditto.
* plugins/paint/atoms/orbitaltool.h: ditto.
2009-12-30 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/arrows/curvedarrowtool.cc: arrow from bond to adjacent atom
now fully implemented.
* plugins/paint/arrows/curvedarrowtool.h: ditto.
2009-12-29 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/group.cc: removed unused header.
* libs/gcp/atom.cc: be careful with children (fixes orbital issues).
* libs/gcp/widgetdata.cc: ditto.
* plugins/paint/atoms/orbital.cc: implement gcpOrbital::SetSelected().
* plugins/paint/atoms/orbital.h: ditto.
2009-12-28 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/Makefile.am: added new files.
* libs/gccv/group.cc:fixed front/back logic.
* libs/gccv/lemniscate.cc: new lemniscate item.
* libs/gccv/lemniscate.h: ditto.
* libs/gcp/atom.cc: bring item to front.
* plugins/paint/atoms/Makefile.am: add new files.
* plugins/paint/atoms/orbital.cc: implement basic serialization.
* plugins/paint/atoms/orbital.ui: UI for the orbital tool.
* plugins/paint/atoms/orbitaltool.cc: make it minimally work.
* plugins/paint/atoms/orbitaltool.h: ditto.
2009-12-27 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/atoms/Makefile.am: add new file.
* plugins/paint/atoms/orbital.cc: new class to represent an atomic orbital.
* plugins/paint/atoms/orbital.h: ditto.
* plugins/paint/atoms/orbitaltool.cc: new tool to draw orbitals.
* plugins/paint/atoms/orbitaltool.h: ditto.
* plugins/paint/atoms/plugin.cc: ditto.
2009-12-26 Jordan Mantha <jordan.mantha@gmail.com>
* programs/table/gchemtable-app.cc: added new charts submenu to view menu
and move File->New Chart to new submenu as "Custom".
* programs/table/gchemtable-app.h: ditto
2009-12-23 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/bond.h: fixed documentation typo.
* libs/gcu/object.cc: do not access a NULL pointer when destroying objects.
* plugins/paint/atoms/elementtool.cc: always update bond after an atom
change.
* programs/table/gchemtable-curve.cc: display element name as a tooltip
when the mouse cursor rests over a data point.
2009-12-22 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: correctly save and load attached hydrogens position.
* libs/gcp/fragment.cc: fixed main atom sniffing when deleting text.
* mozilla-plugin/moz-plugin.c (ChemNew): some work on stream support.
2009-12-20 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: alwas set the correct color for the charge.
* libs/gcp/document.cc: allow setting references to unknown objects while
loading.
* libs/gcp/mechanism-arrow.cc: ditto.
* libs/gcp/reaction-step.cc: do not take mechanism arrow into account
while spacing children.
* libs/gcp/text.cc: fixed vertical alignment.
* libs/gcu/Makefile.am: add new files.
* libs/gcu/crystaldoc.cc: make compatible with new parent API.
* libs/gcu/crystaldoc.h: ditto.
* libs/gcu/document.cc: allow setting references to unknown objects while
loading.
* libs/gcu/document.h: ditto.
* libs/gcu/loader-error.cc: new LoaderError exception class.
* libs/gcu/loader-error.h: ditto.
* plugins/paint/arrows/curvedarrowtool.cc: correctly add arrows inside
reaction steps.
* programs/table/gchemtable-curve.cc: start working on a tooltip API.
* programs/table/gchemtable-curve.h: ditto.
2009-12-19 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/molecule.cc: correctly add atoms inside fragments.
2009-12-08 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/loader.cc: don't double free plugins dir.
2009-12-07 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/fragment.cc: fix atom position.
* plugins/paint/cycles/cycletool.cc: really create all atoms.
2009-12-06 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/formula.cc: do not interpret a substring as a residue when the
whole string is a symbol element. [#28192]
2009-11-25 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: periodic table is not anymor tearable
because this feature is going to be deprecated iN both gtk+ and goffice.
* libs/gcp/preferences.cc: ditto.
* libs/gcp/settings.h: ditto.
* libs/gcp/tools.cc: ditto.
* libs/gcp/tools.h: ditto.
* programs/paint/gchempaint.schemas.in: ditto.
* ui/paint/preferences.ui: ditto.
2009-11-21 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: request goffice >= 0.7.16.
* libs/gcu/cmd-context.cc: fixed after goffice API change.
2009-11-18 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/arrows/curvedarrowtool.cc: more work.
2009-11-14 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/spectrumdoc.cc: do not invert Y-axis.
2009-11-05 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: use more recent LT macros and request gtk+-2.0 >= 2.18.
* libs/gccv/bezier-arrow.cc: add GetControlPoints.
* libs/gccv/bezier-arrow.h: ditto.
* libs/gcu/crystaldoc.h: make space group a standard read-only property.
* libs/gcu/glview.cc: fixed events with recent gtk+
* libs/gcu/gtkchem3dviewer.cc: ditto.
* libs/gcu/gtkcrystalviewer.cc: ditto.
* mozilla-plugin/moz-plugin.c: fixed epiphany crasher.
* plugins/paint/arrows/curvedarrowtool.cc: more work on OnDrag().
* plugins/paint/arrows/curvedarrowtool.h: ditto.
* programs/crystal/document.cc: display the space group in the status
bar when known.
* programs/crystal/window.cc: ditto.
2009-10-24 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/bezier-arrow.cc: invalidate when changing the control points.
* plugins/paint/arrows/curvedarrowtool.cc: started work on
gcpCurvedArrowTool::OnDrag ().
2009-10-23 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/mechanism-arrow.cc: correcty set the arrowhead size for half-
headed arrows.
* mozilla-plugin/chem-viewer.cc: fixed some details.
* mozilla-plugin/moz-plugin.c (ChemNew): fix parameters management (don't
crash anymore) and allow chemical/x-cif files.
* plugins/paint/arrows/curvedarrowtool.cc: don't allow a bond to be the
source of more than 2 electron moves.
* plugins/paint/arrows/curvedarrowtool.h: ditto.
2009-10-20 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/bezier-arrow.cc: implement BezierArrow::Move()
* libs/gccv/bezier-arrow.h: ditto.
2009-10-19 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: fixed color in tool buttons. [#27746]
2009-10-18 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/mechanism-arrow.cc: implement loading.
* libs/gcu/xml-utils.cc: new gcu::ReadFloat function.
* libs/gcu/xml-utils.h: ditto.
* plugins/paint/arrows/curvedarrowtool.cc: when creating an arrow, make
sure it is inside a mechanism step.
2009-10-15 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/bonds/chaintool.cc: always set the bond angle in the
active document.
2009-10-12 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/mechanism-arrow.cc: add links to source and target.
* libs/gcp/mechanism-arrow.h: ditto.
* libs/gcu/chemistry.h: fixed typo in documentation.
* libs/gcu/object.cc: add Object::Link() and make links really work.
* libs/gcu/object.h: ditto.
* libs/gcu/xml-utils.cc: add gcu::WriteFloat and move all functions to
gcu namespace.
* libs/gcu/xml-utils.h: ditto.
2009-10-11 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/mechanism-arrow.cc: implement partially AddItem().
* libs/gcp/mechanism-arrow.h: some more members.
* plugins/paint/arrows/curvedarrowtool.cc: fixed second control point.
2009-10-07 Jean Bréfort <jean.brefort@normalesup.org>
* database/isotopes.xml.in: fixed three typos. [#27619]
2009-10-04 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/bezier-arrow.cc: take control points in bounds when visible.
* libs/gcp/Makefile.am: add some classes to support mechanism curved arrows.
* libs/gcp/application.cc: ditto.
* libs/gcp/mechanism-arrow.cc: ditto.
* libs/gcp/mechanism-arrow.h: ditto.
* libs/gcp/mechanism-step.cc: ditto.
* libs/gcp/mechanism-step.h: ditto.
* libs/gcp/reaction-step.cc: ditto.
* libs/gcp/reaction-step.h: ditto.
* mozilla-plugin/chem-viewer.cc: removed extra spaces.
* mozilla-plugin/moz-plugin.c (ChemNew): remove apparently obsolete code.
* plugins/paint/arrows/curvedarrowtool.cc: show a curved arrow when clicked
on a bond.
* plugins/paint/arrows/curvedarrowtool.h: ditto.
2009-09-28 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/document.cc: fixed a couple of crashers.
2009-09-22 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: load settings before plugins.
* plugins/paint/bonds/Makefile.am: add a new pixmap.
* plugins/paint/bonds/bondtool.cc: invert hash icon when inverting bonds.
* plugins/paint/bonds/bondtool.h: ditto.
* plugins/paint/bonds/plugin.cc: ditto.
2009-09-22 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/tools.cc: don't add a NULL tool.
* plugins/paint/templates/templatetool.cc: update hashed bonds when setting
changes.
* plugins/paint/templates/templatetool.h: ditto.
* templates/paint/templates.xml.in: fixed nucleosides stereochemistry.
2009-09-20 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gogcpapp.cc: cleaned code from old commented out lines.
* goffice/gogcpwin.cc: fixed window title for component edition.
* libs/gcp/application.cc: propagate configurations changes to tools.
* libs/gcp/document.cc: fixed window title for component edition.
* libs/gcp/reaction-operator.cc: use a transparent background.
* libs/gcp/text.cc: fixed text loading.
* libs/gcp/text.h: ditto.
* libs/gcp/tool.h: add Too::OnConfigChanged().
2009-09-19 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: add silent rules when available.
* themes/paint/Wikipedia: revised theme (Matthias Mailänder).
2009-09-18 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: fixed the key type for "inverd-hashed-wedge".
* libs/gcp/preferences.cc: fixed initialization of the same option.
2009-09-17 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: fixed gconf tests.
2009-09-16 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: add an option to invert hash bonds. [#26810]
* libs/gcp/application.h: ditto.
* libs/gcp/bond.cc: ditto.
* libs/gcp/preferences.cc: ditto.
* libs/gcp/settings.cc: ditto.
* libs/gcp/settings.h: ditto.
* plugins/paint/bonds/bondtool.cc: ditto.
* programs/paint/gchempaint.schemas.in: ditto.
* ui/paint/preferences.ui: ditto.
2009-09-07 Jean Bréfort <jean.brefort@normalesup.org>
* programs/table/gchemtable-app.cc: load the ui flies not glade. [#27395]
* ui/table/acidity.ui: removed the top level window.
* ui/table/block.ui: ditto.
* ui/table/family.ui: ditto.
* ui/table/state-thermometer.ui: ditto.
2009-09-07 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.11.4).
2009-09-06 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/fill-item.cc: fixed after last goffice change.
* libs/gccv/line-item.cc: ditto.
* libs/gccv/text-tag.cc: ditto.
* libs/gccv/text.cc: ditto.
* libs/gccv/wedge.cc: ditto.
* libs/gcp/atom.cc: ditto.
* libs/gcp/electron.cc: ditto.
* libs/gcp/fragment.cc: ditto.
* libs/gcp/settings.cc: ditto.
* libs/gcp/text.cc: ditto.
* libs/gcp/view.cc: ditto.
* libs/gcu/spectrumdoc.cc: ditto.
* libs/gcu/xml-utils.cc: ditto.
* plugins/loaders/cdx/cdx.cc: ditto.
* plugins/loaders/cdxml/cdxml.cc: ditto.
* plugins/paint/arrows/arrowtool.cc: ditto.
* plugins/paint/text/texttool.cc: ditto.
* programs/3d/window.cc: ditto.
2009-09-03 Daniel Leidert <daniel.leidert@wgdd.de>
* docs/reference/Makefile.am: Don't use @foo@ syntax for variables
like CFLAGS.
* gnumeric/Makefile.am: Ditto.
* goffice/Makefile.am: Ditto.
* libs/gccv/Makefile.am: Ditto.
* libs/gcp/Makefile.am: Ditto.
* libs/gcu/Makefile.am: Ditto.
* mozilla-plugin/Makefile.am: Ditto.
* plugins/loaders/cdx/Makefile.am: Ditto.
* plugins/loaders/cdxml/Makefile.am: Ditto.
* plugins/loaders/cif/Makefile.am: Ditto.
* plugins/loaders/cml/Makefile.am: Ditto.
* plugins/paint/arrows/Makefile.am: Ditto.
* plugins/paint/atoms/Makefile.am: Ditto.
* plugins/paint/bonds/Makefile.am: Ditto.
* plugins/paint/cycles/Makefile.am: Ditto.
* plugins/paint/residues/Makefile.am: Ditto.
* plugins/paint/selection/Makefile.am: Ditto.
* plugins/paint/templates/Makefile.am: Ditto.
* plugins/paint/text/Makefile.am: Ditto.
* plugins/paint/wikipedia/Makefile.am: Ditto.
* programs/3d/Makefile.am: Ditto.
* programs/calc/Makefile.am: Ditto.
* programs/crystal/Makefile.am: Ditto.
* programs/paint/Makefile.am: Ditto.
* programs/spectra/Makefile.am: Ditto.
* programs/table/Makefile.am: Ditto.
* tests/Makefile.am: Ditto.
2009-09-02 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/loader.cc: fixed after last goffice change.
2009-09-01 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: requires goffice >= 0.7.12.
* libs/gccv/arrow.cc: update according to goffice API changes.
* libs/gccv/bezier-arrow.cc: ditto.
* libs/gccv/circle.cc: ditto.
* libs/gccv/fill-item.cc: ditto.
* libs/gccv/hash.cc: ditto.
* libs/gccv/line-item.cc: ditto.
* libs/gccv/line.cc: ditto.
* libs/gccv/poly-line.cc: ditto.
* libs/gccv/rectangle.cc: ditto.
* libs/gccv/squiggle.cc: ditto.
* libs/gccv/text-tag.cc: ditto.
* libs/gccv/text.cc: ditto.
* libs/gccv/wedge.cc: ditto.
* libs/gcp/atom.cc: ditto.
* libs/gcp/electron.cc: ditto.
* libs/gcp/fragment.cc: ditto.
* libs/gcp/settings.cc: ditto.
* libs/gcp/text.cc: ditto.
* libs/gcp/view.cc: ditto.
* libs/gcu/spectrumdoc.cc: ditto.
* libs/gcu/xml-utils.cc: ditto.
* plugins/loaders/cdx/cdx.cc: ditto.
* plugins/loaders/cdxml/cdxml.cc: ditto.
* plugins/paint/arrows/arrowtool.cc: ditto.
* plugins/paint/text/texttool.cc: ditto.
* programs/3d/window.cc: ditto.
2009-08-30 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/bond.cc: fixed a double bond position.
* libs/gcp/document.cc: do not set a bond as direct child when it already
has a parent.
* libs/gcp/fragment.cc: allways add atom as child when loading.
* libs/gcp/molecule.cc: removed obsolete code.
* plugins/paint/text/fragmenttool.cc: make atoms replacement work.
2009-08-29 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/docprop.cc: release the themes when done.
* libs/gcp/document.cc: always release old theme.
* libs/gcp/theme.cc: exit cleanly.
* plugins/paint/bonds/chaintool.cc: use delete [] to delete an array.
* plugins/paint/text/fragmenttool.cc: some work on atom to fragment
transformation.
2009-08-28 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/bezier-arrow.cc: implement BezierArrow::Distance().
* libs/gcp/fragment.cc: implement smart primes.
2009-08-25 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/bezier-arrow.cc: take arrow head into account for bounds.
* plugins/loaders/cdx/cdx.cc: export Z order.
* plugins/loaders/cdxml/cdxml.cc: ditto.
2009-08-24 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/text/fragmenttool.cc: implement text pasting in fragments.
2009-08-23 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/loaders/cdx/cdx.cc: fixed scale issues.
2009-08-20 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: requires goffice-0.7.10.
* libs/gcu/application.cc: fixed after goffice grand rename.
* libs/gcu/cmd-context.cc: ditto.
* libs/gcu/loader.cc: ditto.
* libs/gcu/loader.h: ditto.
* plugins/loaders/cdx/cdx.cc: ditto.
* plugins/loaders/cdxml/cdxml.cc: ditto.
* plugins/loaders/cif/cif.cc: ditto.
* plugins/loaders/cml/cml.cc: ditto.
2009-08-19 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/document.cc: add Document::GetProperty ().
* libs/gcp/document.h: ditto.
* plugins/loaders/cdx/cdx.cc: start working on moleules export.
* plugins/loaders/cdxml/cdxml.cc: export simple molecules.
* plugins/loaders/cml/cml.cc: export children of not exported objects.
2009-08-18 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/loaders/cdx/cdx.cc: export font table.
* plugins/loaders/cdxml/cdxml.cc: ditto.
2009-08-17 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: request gnumeric 1.9.10 to build the gnumeric plugin.
* gnumeric/functions.cc: fixed function description according to new API.
* plugins/loaders/cdx/cdx.cc: export color table.
* plugins/loaders/cdxml/cdxml.cc: ditto.
2009-08-16 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/bezier-arrow.cc: implement drawing.
* libs/gccv/bezier-arrow.h: ditto.
* libs/gccv/text.cc: fix unicode keyboard input.
* libs/gccv/text.h: ditto.
* libs/gcp/tool.cc: ditto.
* libs/gcp/tool.h: ditto.
* libs/gcp/view.cc: ditto.
* plugins/loaders/cdxml/cdxml.cc: use xmlDoc instead of GsfXML.
* plugins/paint/arrows/curvedarrowtool.cc: create a bezier arrow on click.
* plugins/paint/text/fragmenttool.cc: fix unicode keyboard input.
* plugins/paint/text/texttool.cc: ditto.
* plugins/paint/text/texttool.h: ditto.
* programs/spectra/window.cc: fix a memory leak.
2009-08-15 Jean Bréfort <jean.brefort@normalesup.org>
* gnumeric/functions.cc: make documentation more gnumeric compliant.
* libs/gcp/theme.cc: fixed localization in themes.
* plugins/paint/wikipedia/wikipediatool.cc: reimplemented.
* themes/paint/Wikipedia: fixed localization in themes.
2009-08-14 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text-tag.cc: add a comment.
* libs/gccv/text.cc: don't set the color by default.
* libs/gcp/fragment.cc: reimplement charge.
* plugins/paint/atoms/chargetool.cc: fully reimplemented.
* plugins/paint/atoms/chargetool.h: ditto.
2009-08-13 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: add domainname to gnumeric/plugin.xml.
* gnumeric/functions.cc: ditto, and move function help to new API.
* gnumeric/plugin.xml.in: add domainname to gnumeric/plugin.xml.
* gnumeric/plugin.xml.in.in: ditto.
* libs/gcp/fragment.cc: more reimplementation.
* libs/gcu/crystaldoc.cc: delete duplicate atoms from definition.
2009-08-12 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text.cc: fixed vertical position when text have several runs.
* libs/gcp/fragment.cc: fix various bugs.
* libs/gcp/tool.cc: add a flag to avoid status erasing on button release.
* libs/gcp/tool.h: ditto.
* libs/gcp/view.cc: ditto.
* plugins/paint/text/fragmenttool.cc: add status text according to mode.
* plugins/paint/text/fragmenttool.h: ditto.
2009-08-11 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text.cc: don't create too many runs.
* libs/gcp/document.cc: fix a window title issue.
* libs/gcp/fragment.cc: import 0.10 and earlier fragments.
2009-08-09 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text.cc: fixed some fragment related issues.
* libs/gcp/fragment.cc: ditto.
* libs/gcp/fragment.h: ditto.
* libs/gcp/text-object.cc: ditto.
* libs/gcp/text-object.h: ditto.
* libs/gcp/text.cc: ditto.
* libs/gcu/crystaldoc.cc: ditto.
* libs/gcu/spacegroup.cc: fixed transforms iterations so that the iterator
points to the current element, not the next one.
* plugins/loaders/cif/cif.cc: crystal export to cif completed.
* plugins/loaders/cml/cml.cc: crystal export to cml completed.
2009-08-08 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text.cc: removed an obsolete FIXME.
* libs/gcp/fragment.cc: more work on charges.
* libs/gcp/fragment.h: ditto.
* libs/gcp/text-object.cc: ditto.
* libs/gcu/atom.cc: more work on cif and cml export.
* libs/gcu/crystalatom.cc: ditto.
* libs/gcu/crystalatom.h: ditto.
* libs/gcu/crystaldoc.cc: ditto.
* libs/gcu/crystaldoc.h: ditto.
* plugins/loaders/cif/cif.cc: ditto.
* plugins/loaders/cml/cml.cc: ditto.
* programs/crystal/atomsdlg.cc: ditto.
* programs/crystal/document.cc: ditto.
2009-08-07 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text-tag.cc: add TextTag::Restrict to avoid overlapping tags.
* libs/gccv/text-tag.h: ditto.
* libs/gccv/text.cc: use TextTag::Restrict when inserting a new tag.
* libs/gcp/fragment.cc: allow a charge after a stoichiometry coefficient.
* libs/gcp/fragment.h: add TextTag::Restrict support for charges and
stoichiometry.
2009-08-06 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/fragment.cc: some work on charges.
* libs/gcu/crystaldoc.cc: start work on cif export.
* libs/gcu/crystaldoc.h: ditto.
* plugins/loaders/cif/cif.cc: ditto.
* programs/crystal/application.cc: ditto.
* programs/crystal/document.cc: ditto.
* programs/crystal/document.h: ditto.
2009-08-05 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text.cc: fix runs evaluation.
* libs/gcp/fragment.cc: automatic stoichiometry coefficients reimplemented.
* plugins/paint/text/fragmenttool.cc: don't automatically change the current
mode to StoichiometryMode or ChargeMode.
* programs/crystal/document.cc: fixed unneeded warnings and error messages.
2009-08-03 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: enhanced bond drawing near symbols and clean out white
rectangles.
* libs/gcp/fragment.cc: fix horizontal position.
* libs/gcp/fragment.h: use double for left bearing.
* libs/gcu/transform3d.cc: add missing const.
* libs/gcu/transform3d.h: ditto.
* plugins/paint/wikipedia/wikipediatool.cc: start exporting png files again.
2009-08-02 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text.cc: make underline and strikethrough work again.
* libs/gcu/crystalatom.cc: partly implement space group sniffing.
* libs/gcu/crystalatom.h: ditto.
* libs/gcu/crystaldoc.cc: ditto.
* libs/gcu/crystaldoc.h: ditto.
* libs/gcu/spacegroup.cc: ditto.
* libs/gcu/spacegroup.h: ditto.
* plugins/loaders/cdx/cdx.cc: fix a test.
* plugins/loaders/cif/cif.cc: remove unuseful code.
* plugins/loaders/cml/cml.cc: enhance the <scalar/> node support.
* programs/crystal/application.cc: do not write cml and cif files for now.
* programs/crystal/document.h: removed the ReadOnly property (moved to
gcu::CrystalDoc class).
2009-07-31 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text.cc: fix y for lines.
* libs/gcu/crystalatom.cc: ensure that only fractional properties are
imported.
* libs/gcu/crystalatom.h: ditto.
* libs/gcu/crystaldoc.cc: don't add an atom twice or more.
* libs/gcu/objprops.h: add new fractional coordinates properties.
* libs/gcu/spacegroup.cc: fix a possible crash.
* plugins/loaders/cif/cif.cc: use new fractional coordinates properties.
* plugins/loaders/cml/cml.cc: enhanced crystal structure import.
2009-07-28 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/canvas.cc: more work on underline and friends.
* libs/gccv/canvas.h: ditto.
* libs/gccv/structs.h: ditto.
* libs/gccv/text-tag.cc: ditto.
* libs/gccv/text-tag.h: ditto.
* libs/gccv/text.cc: ditto.
* libs/gcp/application.cc: do not loose spaces while loading. [#27131]
* libs/gcp/text.cc: ditto.
* libs/gcu/xml-utils.cc: new color serialization methods.
* libs/gcu/xml-utils.h: ditto.
2009-07-27 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/structs.h: add support for better text underline, strikethrough
and overline.
* libs/gccv/text-tag.cc: ditto.
* libs/gccv/text-tag.h: ditto.
* libs/gcp/text.cc: ditto.
* plugins/paint/text/texttool.cc: ditto.
* plugins/paint/text/texttool.h: ditto.
2009-07-26 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/chem3ddoc.cc: ues Matrix::glmult.
* libs/gcu/crystaldoc.cc: completed cif files loading and removed OpenBabel
dependency.
* libs/gcu/crystaldoc.h: ditto.
* libs/gcu/matrix.cc: add Matrix::glmult to take OpenGL axes orientation
and removed OpenBabel dependency.
* libs/gcu/matrix.h: ditto.
* libs/gcu/objprops.h: add authors related properties.
* libs/gcu/spacegroup.cc: added missing header.
* plugins/loaders/cif/cif.cc: import now works even if not perfect.
* plugins/loaders/cml/cml.cc: start work on crystal support.
* programs/crystal/application.cc: removed OpenBabel dependency.
* programs/crystal/application.h: ditto.
* programs/crystal/document.cc: ditto.
* programs/crystal/document.h: ditto.
2009-07-25 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/structs.h: add an enum for text decoration type.
* libs/gccv/text.cc: fix selection in multiline texts.
* libs/gcp/text.cc: fix text color loading.
* plugins/paint/text/texttool.cc: don't use duplicate accelerators.
2009-07-21 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text-client.h: add methods for interline and justification
changes notifications.
* libs/gccv/text.cc: manage interline and fix various issues.
* libs/gccv/text.h: ditto.
* libs/gcp/text.cc: make interline and justification persistents.
* libs/gcp/text.h: ditto.
* plugins/paint/text/texttool.cc: add shortcuts to change justification
and interline.
2009-07-20 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text-tag.cc: removed interline property from NewLineTag.
* libs/gccv/text-tag.h: ditto.
* libs/gccv/text.cc: add an interline property to Text.
* libs/gccv/text.h: ditto.
* libs/gcp/atom.cc: set the colors to the text, not the underlying
rectangle.
* libs/gcp/text.cc: load/save multiline text.
2009-07-19 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/crystaldoc.cc: load space group from cif files.
* libs/gcu/crystaldoc.h: use gcu::SpaceGroup instead of OpenBabel.
* libs/gcu/document.h: add virtual GetGtkWindow().
* libs/gcu/objprops.h: add space group property.
* libs/gcu/spacegroup.cc: fix initialization in Find() and initial matrix
value in AddTransform().
* libs/gcu/transform3d.cc: call Normalize() when needed.
* plugins/loaders/cif/cif.cc: load space group.
2009-07-18 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/application.cc: fixed a compiler warning.
* libs/gcu/crystaldoc.cc: load chemical names from cif files.
* libs/gcu/crystaldoc.h: ditto.
* libs/gcu/document.h: made SetTitle virtual.
* libs/gcu/objprops.h: add properties for chemical names in cif files.
* plugins/loaders/cif/cif.cc: load names and manage keywords.
* programs/crystal/application.cc: update document title for cif files.
* programs/crystal/document.cc: ditto.
* programs/crystal/document.h: ditto.
2009-07-16 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/reactant.cc: fixed a stoichiometric coefficient issue.
* libs/gcp/reaction-prop-dlg.cc: ensure the combo box is populated.
* libs/gcp/text.cc: don't set the fill color when selected.
* libs/gcu/crystaldoc.cc: load cell parameters using GetProperty().
* libs/gcu/crystaldoc.h: add GetPoperty().
* libs/gcu/objprops.h: add cell parameters.
* libs/gcu/ui-builder.cc: add a combo box intializer.
* libs/gcu/ui-builder.h: ditto.
* plugins/loaders/cif/cif.cc: loads cell parameters.
* programs/crystal/application.cc: load cif files only using the gcu::Loader
mechanism.
* ui/paint/arrow-object.ui: add a model to the combo box.
2009-07-15 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text.cc: add a default text color.
* libs/gccv/text.h: ditto.
* libs/gcp/reaction-operator.cc: reiplemented reactions.
* libs/gcp/reaction-step.cc: ditto.
* libs/gcp/reaction-step.h: ditto.
* libs/gcp/widgetdata.cc: enhance WidgetData::IsSelected().
* plugins/loaders/cif/cif.cc: some initial work.
* programs/crystal/application.cc: start using gcu::Loader mechanism.
2009-07-14 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/application.cc: create a default application used when needed.
* libs/gcu/application.h: ditto.
* libs/gcu/chem3ddoc.cc: use the Application::Loader mechanism whenever
possible.
* libs/gcu/chem3ddoc.h: ditto.
* libs/gcu/molecule.cc:add names.
* libs/gcu/molecule.h: ditto.
* plugins/loaders/cml/cml.cc: load molecule names.
2009-07-13 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text.cc: added Text::DeleteTextTag.
* libs/gccv/text.h: ditto.
* plugins/paint/atoms/chargetool.cc: fully reimplemented.
* plugins/paint/atoms/chargetool.h: ditto.
2009-07-10 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/window.cc: do not use a freed string in a message box.
* libs/gcp/atom.cc: more work on charges reimplementation.
* plugins/paint/atoms/chargetool.cc: ditto.
2009-07-08 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text.cc: set position after text to track size.
* libs/gcp/atom.cc: changed int to gccv::Anchor as returned value by
Atom::GetChargePosition.
* libs/gcp/atom.h: ditto.
* libs/gcp/fragment-atom.cc: ditto.
* libs/gcp/fragment-atom.h: ditto.
* libs/gcp/fragment.cc: ditto.
* libs/gcp/fragment.h: ditto.
* plugins/paint/atoms/chargetool.cc: mostly reimplement OnClicked.
2009-07-07 Jean Bréfort <jean.brefort@normalesup.org>
* *Makefile.am: make anjuta happy (indentation issue).
* libs/gcp/atom.cc: fixed electrons horizontal position.
* libs/gcp/electron.cc: fixed electrons pair rendering.
* plugins/paint/atoms/electrontool.cc: typo.
2009-07-06 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/electron.cc: reimplemented in new canvas.
* libs/gcp/electron.h: ditto.
* libs/gcp/tools.cc: fix a crasher relmated to the ui-builder migration.
* libs/gcp/tools.h: ditto.
2009-07-05 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text.cc: fixed an uninitialized variable issue.
* libs/gcp/atom.cc: update bonds when showing/hiding the symbol and use
ink extents instead of logical extents for electrons and charges positions.
* libs/gcp/window.cc: add a full screen menu option.
2009-06-30 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: add command-line options to get maximized
or fullscreen windows.
* libs/gcp/application.h: ditto.
* libs/gcp/window.cc: ditto.
* libs/gcu/application.cc: ditto.
* libs/gcu/application.h: ditto.
2009-06-25 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.11.3).
2009-06-25 Jean Bréfort <jean.brefort@normalesup.org>
* Makefile.am: fixed discheck when goffice doesn't use gconf.
* configure.ac: ditto.
* plugins/paint/arrows/Makefile.am: ditto.
* programs/crystal/Makefile.am: ditto.
* programs/paint/Makefile.am: ditto.
2009-06-25 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text.cc: fixed font description life cycle and enhance size.
* libs/gccv/text.h: ditto.
* libs/gcp/bond.cc: fixed dissymetry around atoms.
* libs/gcu/application.cc: shutdown goffice when done.
2009-06-17 Jean Bréfort <jean.brefort@normalesup.org>
* *: cleaned included headers.
2009-06-16 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/canvas.h: include goffice/goffice.h instead of individual
files.
* libs/gccv/line-item.h: ditto.
* libs/gccv/text-tag.h: ditto.
* libs/gccv/wedge.h: ditto.
* libs/gcp/application.h: ditto.
* libs/gcp/settings.h: ditto.
* libs/gcp/theme.h: ditto.
* libs/gcu/application.h: ditto.
* libs/gcu/cmd-context.h: ditto.
* libs/gcu/glview.h: ditto.
* libs/gcu/gtkspectrumviewer.h: ditto.
* libs/gcu/loader.h: ditto.
* libs/gcu/macros.h: ditto.
* libs/gcu/spectrumdoc.h: ditto.
* libs/gcu/spectrumview.h: ditto.
* programs/crystal/globals.h: ditto.
* programs/table/gchemtable-curve.cc: ditto.
* programs/table/gchemtable-curve.h: ditto.
* programs/table/gchemtable-data.cc: ditto.
* programs/table/gchemtable-data.h: ditto.
2009-06-07 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/gtkperiodic.c (gtk_periodic_init),
(gtk_periodic_finalize): ported to GtkBuilder as well.
* ui/gtkperiodic.ui: removed the toplevel window.
2009-05-27 Jean Bréfort <jean.brefort@normalesup.org>
* all files: ported from libglade to GtkBuilder.
2009-05-23 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/spectrumview.cc: fixed a crash.
* programs/spectra/window.cc: add the coordinates as tip when the mouse
pointer is over the chart.
2009-05-22 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: needs goffice >= 0.7.7.
* programs/table/gchemtable-curve.cc: fixed vector selections.
* programs/table/gchemtable-data-allocator.cc: make it compile with latest
goffice.
* programs/table/gchemtable-data.cc: fix min max calculation for vectors.
2009-05-17 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text.cc: fixed dimensions.
* libs/gcp/text-object.cc: always initialize m_Editor.
2009-05-10 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text-tag.cc: add a new line tag.
* libs/gccv/text-tag.h: ditto.
* libs/gccv/text.cc: implement runs on one line.
* libs/gccv/text.h: ditto.
* libs/gcp/fragment.cc: fix saving.
2009-04-30 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: request goffice>=0.7.6 after new API breakage.
* programs/calc/gchemcalc.cc: use new GOData API.
* programs/spectra/window.cc: ditto.
* programs/table/gchemtable-curve.cc: ditto.
* programs/table/gchemtable-data-allocator.cc: ditto.
* programs/table/gchemtable-data.cc: ditto.
2009-04-27 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/atom.cc: start replacing OpenBabel code.
* libs/gcu/atom.h: ditto.
* libs/gcu/chem3ddoc.cc: ditto.
* libs/gcu/chem3ddoc.h: ditto.
* libs/gcu/crystaldoc.cc: ditto.
* libs/gcu/cylinder.cc: ditto.
* libs/gcu/cylinder.h: ditto.
* libs/gcu/glview.cc: ditto.
* libs/gcu/matrix.cc: ditto.
* libs/gcu/molecule.cc: ditto.
* libs/gcu/molecule.h: ditto.
* libs/gcu/object.cc: ditto.
* libs/gcu/object.h: ditto.
* libs/gcu/sphere.cc: ditto.
* libs/gcu/sphere.h: ditto.
* libs/gcu/vector.cc: ditto.
* libs/gcu/vector.h: ditto.
* programs/3d/application.cc: ditto.
* programs/3d/document.cc: ditto.
* programs/3d/main.cc: ditto.
2009-04-26 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: requires libspreadsheet >= 1.9.6 to build the gnumeric
plugin.
2009-04-17 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text-tag.cc: fix fragment specific tags issues.
* libs/gccv/text-tag.h: add TextTag::NeedNewRun() method.
* libs/gcp/fragment.cc: reimplement serialization.
2009-04-16 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/fragment.cc: partially reimplement loading.
* libs/gcp/text-object.cc: add missing initialization.
2009-04-15 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: require gtk+-2.0 >= 2.14 and add -DGSEAL_ENABLE.
* libs/gccv/canvas.cc: make things compile with -DGSEAL_ENABLE.
* libs/gcp/fragment.cc: export the custom tags.
* libs/gcp/fragment.h: ditto.
* libs/gcp/view.cc: make things compile with -DGSEAL_ENABLE.
* libs/gcp/widgetdata.cc: ditto.
* libs/gcp/window.cc: ditto.
* libs/gcu/glview.cc: ditto.
* libs/gcu/glview.h: ditto.
* libs/gcu/gtkchem3dviewer.cc: ditto.
* libs/gcu/gtkcrystalviewer.cc: ditto.
* libs/gcu/gtkperiodic.c: (gtk_periodic_size_allocate),
(gtk_periodic_size_request): ditto.
* libs/gcu/gtkspectrumviewer.cc: ditto.
* libs/gcu/spectrumdoc.cc: ditto.
* libs/gcu/spectrumview.cc: ditto.
* libs/gcu/spectrumview.h: ditto.
* mozilla-plugin/chem-viewer.cc: ditto.
* plugins/paint/templates/templatetool.cc: ditto.
* plugins/paint/templates/templatetool.h: ditto.
* plugins/paint/text/fragmenttool.cc: implement UpdateTagsList.
* plugins/paint/text/fragmenttool.h: ditto.
* plugins/paint/text/texttool.cc: make things compile with -DGSEAL_ENABLE.
* programs/calc/gchemcalc.cc: ditto.
* programs/crystal/linesdlg.cc: ditto.
* programs/spectra/window.cc: ditto.
* programs/table/gchemtable-curve.cc: ditto.
* programs/table/gchemtable-curve.h: ditto.
* programs/table/gchemtable-data-allocator.cc: ditto.
2009-04-12 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/fragment.cc: implement an edition mode.
* libs/gcp/fragment.h: ditto.
* libs/gcp/preferences.cc: take new PANGO_WEIGHT_* values into account.
* libs/gcp/theme.cc: ditto.
* plugins/paint/text/fragmenttool.cc: replace "-" by minus when it is
probably a charge.
* plugins/paint/text/fragmenttool.h:
* plugins/paint/text/texttool.cc: don't use deprecated event->string.
* plugins/paint/text/texttool.h: made UpdateTagsList virtual.
2009-04-11 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text-tag.cc: allow for custom tags.
* libs/gccv/text-tag.h: ditto.
* libs/gccv/text.cc: ditto.
* libs/gcp/fragment.cc: more reimplementation.
* libs/gcp/fragment.h: ditto.
* plugins/paint/text/fragmenttool.cc: ditto and add new modes to force
interpretation as charge or stoichiometry.
* plugins/paint/text/fragmenttool.h: ditto.
2009-04-10 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/spectrumdoc.cc: make our code compatible with new goffice API.
* libs/gcu/spectrumview.cc: ditto.
* programs/calc/gchemcalc.cc: ditto.
* programs/table/gchemtable-curve.cc: ditto.
2009-04-09 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text.cc: add two new methods and fix OnButtonPressed when the
text is inside a positioned group.
* libs/gccv/text.h: add two new methods: GetIndexAt and GetPositionAtIndex.
* libs/gcp/fragment.cc: more reimplementation work.
* plugins/paint/text/fragmenttool.cc: ditto.
* plugins/paint/text/texttool.cc: ensure the document is marked as dirty
when a text has changed.
2009-04-08 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text.cc: fixed selection start after typing a backspace, fixed
GetSelectionBounds signature, and always initialize m_CurTags to non NULL.
* libs/gccv/text.h: fixed GetSelectionBounds signature.
* libs/gcp/atom.cc: add a missing return.
* libs/gcp/fragment.cc: more work on fragments reimplementation.
* libs/gcp/fragment.h: ditto.
* libs/gcp/text-object.cc: ditto.
* plugins/paint/text/fragmenttool.cc: ditto.
* plugins/paint/text/texttool.cc: cleaned OnKeyPress.
2009-04-07 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: requires goffice >= 0.7.5 because of some macros renaming.
* goffice/gchemutils.cc: make our code compatible with new goffice API.
* goffice/gchemutils.h: ditto.
* libs/gccv/text.cc: removed an obsolete FIXME.
* libs/gcp/document.cc: add fragment to the document before adding it to
the view..
* libs/gcp/fragment.cc: started reimplementation.
* libs/gcp/text-object.h: removed unused m_Align.
* libs/gcp/view.cc: don't try to set widget size to a negative value.
* libs/gcu/cmd-context.cc: make our code compatible with new goffice API.
* libs/gcu/cmd-context.h: ditto.
* libs/gcu/gtkcomboperiodic.c: ditto.
* libs/gcu/gtkcomboperiodic.h: ditto.
* libs/gcu/loader.cc: ditto.
* libs/gcu/spectrumdoc.cc: ditto.
* libs/gcu/spectrumview.cc: ditto.
* mozilla-plugin/chem-viewer.cc: ditto.
* plugins/paint/text/fragmenttool.cc: started reimplementation.
* plugins/paint/text/texttool.cc: paste text from other apps.
* programs/calc/gchemcalc.cc: make our code compatible with new goffice API.
* programs/spectra/gspectrum.cc: ditto.
* programs/table/gchemtable-curve.cc: ditto.
* programs/table/gchemtable-data-allocator.cc: ditto.
* programs/table/gchemtable-data-allocator.h: ditto.
* programs/table/gchemtable-data.cc: ditto.
* programs/table/gchemtable-data.h: ditto.
* programs/table/gchemtable-main.cc: ditto.
2009-04-06 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/group.cc: set empty group size to [G_MAXDOUBLE, -G_MAXDOUBLE].
* libs/gccv/text-client.h: add a position argument to TextChanged().
* libs/gccv/text.cc: implement Get/SetSelectionBounds().
* libs/gccv/text.h: ditto.
* libs/gcp/text-object.cc: ditto, and reimplement undo/redo and clipboard
operations.
* libs/gcp/text-object.h: ditto.
* libs/gcp/text.cc: ditto.
* libs/gcp/text.h: ditto.
* plugins/paint/text/texttool.cc: ditto, still missing: pasting text
from other applications and fragment support.
2009-04-05 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text-tag.cc: do not use pango for underline and strikethrough
(and break these for now).
* libs/gccv/text.cc: implement ApplyTagsToSelection.
* libs/gccv/text.h: ditto.
* plugins/paint/text/texttool.cc: applies newly selected tags to selection.
* plugins/paint/text/texttool.h: ditto.
2009-04-04 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/Makefile.am: add new TextClient class.
* libs/gccv/structs.h: remove text bounds.
* libs/gccv/text-client.cc: new ItemClient derived class.
* libs/gccv/text-client.h: ditto.
* libs/gccv/text-tag.h: update the copyright.
* libs/gccv/text.cc: use the new TextClient class.
* libs/gccv/text.h: update the copyright.
* libs/gcp/Makefile.am: add new TextEditor class.
* libs/gcp/fragment.cc: make TextObject derive from gccv::TextClient.
* libs/gcp/fragment.h: ditto.
* libs/gcp/text-editor.h: new class.
* libs/gcp/text-object.cc: make TextObject derive from gccv::TextClient.
* libs/gcp/text-object.h: ditto.
* libs/gcp/text.cc: ditto.
* libs/gcp/text.h: ditto.
* libs/gcp/tool.cc: rename OnEvent to OnKeyPress.
* libs/gcp/tool.h: ditto.
* libs/gcp/view.cc: ditto.
* plugins/paint/bonds/chaintool.cc: ditto.
* plugins/paint/bonds/chaintool.h: ditto.
* plugins/paint/text/fragmenttool.cc: ditto.
* plugins/paint/text/fragmenttool.h: ditto.
* plugins/paint/text/texttool.cc: more reimplement work.
* plugins/paint/text/texttool.h: make the tool derive from gcp::TextEditor.
2009-03-31 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: add gcp::Atom::HasAvailableElectrons.
* libs/gcp/atom.h: ditto.
* libs/gcp/view.cc: use the atom if any when moving the mouse.
* plugins/paint/arrows/curvedarrowtool.cc: don't allow curves starting
from an atom without appropriate unbonded electrons.
2009-03-30 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/item.h: added missing space.
* libs/gccv/text.cc: implement selection.
* libs/gccv/text.h: ditto.
* libs/gcp/text.cc: ditto.
* plugins/paint/text/texttool.cc: ditto.
* plugins/paint/text/texttool.h: ditto.
2009-03-28 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.11.2).
* libs/gccv/text-tag.h: add methods to retreive properties.
* libs/gcp/text.cc: reimplement serialization.
2009-03-25 Jean Bréfort <jean.brefort@normalesup.org>
* gnumeric/Makefile.am: fixed typo in INCLUDES.
* plugins/loaders/cdx/Makefile.am: fixed CLEANFILES.
* plugins/loaders/cdxml/Makefile.am: ditto.
* plugins/loaders/cif/Makefile.am: ditto.
* plugins/loaders/cml/Makefile.am: ditto.
2009-03-24 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text-tag.cc: made the Duplicate method const.
* libs/gccv/text-tag.h: ditto.
* libs/gccv/text.cc: add a few new methods.
* libs/gccv/text.h: ditto.
* libs/gcp/fragment.cc: ensure things compile by commenting out most
things.
* libs/gcp/reactant.cc: ensure things compile.
* libs/gcp/text-object.cc: removed m_Layouts and attributes, add tags.
* libs/gcp/text-object.h: ditto.
* libs/gcp/text.cc: reimplement loading.
* plugins/paint/text/texttool.cc: ensure things compile.
2009-03-23 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text-tag.cc: fixed sub/superscript support.
2009-03-19 Jean Bréfort <jean.brefort@normalesup.org>
* docs/man/gchem3d.1: updated man page.
* docs/man/gcrystal.1: ditto.
* docs/man/gspectrum.1: ditto.
* libs/gccv/structs.h: add a new TextPosition enum.
* libs/gccv/text-tag.cc: make things mostly work.
* libs/gccv/text-tag.h: ditto.
* libs/gccv/text.cc: start suporting rich text again.
* libs/gccv/text.h: ditto.
* libs/gcp/atom.cc: adapt to gccv API changes.
* plugins/paint/text/texttool.cc: ditto and partly reimplement.
* plugins/paint/text/texttool.h: ditto.
2009-03-18 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/theme.cc: fixed an issue related to file themes.
2009-03-17 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/tool.h: fixed crashes when copying text. [#25888]
* libs/gcp/widgetdata.cc: ditto.
* libs/gcp/widgetdata.h: ditto.
* plugins/paint/text/fragmenttool.cc: ditto.
* plugins/paint/text/texttool.cc: ditto.
2009-03-16 Jean Bréfort <jean.brefort@normalesup.org>
* Makefile.am: fixed distcheck flags after the gnumeric plugin
introduction.
* configure.ac: fixed typo.
* libs/gcp/reaction-operator.cc: more reimplementation work.
* libs/gcp/reaction-operator.h: ditto.
* libs/gcp/reaction.cc: ditto.
* plugins/paint/arrows/retrosynthesis.cc: ditto.
* plugins/paint/selection/group.cc: ditto.
* plugins/paint/selection/group.h: ditto.
2009-03-15 Jean Bréfort <jean.brefort@normalesup.org>
* Makefile.am: add gnumeric to SUBDIRS.
* configure.ac: check for gnumeric.
* gnumeric/Makefile.am: new gnumeric plugin.
* gnumeric/functions.cc: add molarmass function to gnumeric.
* gnumeric/plugin.xml.in: ditto.
* libs/gcu/formula.cc: fixed Formula constructor.
* libs/gcu/spacegroup.cc: fixed typo in message.
2009-03-14 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/object.cc: load "text" nodes when they have children.
2009-03-10 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gchemutils.cc: fixed more compilation warnings.
* goffice/gogcpapp.cc: ditto.
* libs/gccv/text-tag.cc: add SriketroughTextTag and TextTagList classes.
* libs/gccv/text-tag.h: ditto.
* libs/gccv/text.h: add Text::GetCursorPosition ().
* libs/gcp/view.h: fixed documentation.
* libs/gcu/application.h: ditto.
* libs/gcu/loader.h: ditto.
* libs/gcu/structs.h: ditto.
* mozilla-plugin/chem-viewer.cc: fixed more compilation warnings.
* mozilla-plugin/moz-plugin.c: ditto.
* plugins/paint/text/texttool.cc: more reimplementation work.
* plugins/paint/text/texttool.h: ditto.
* programs/3d/main.cc: fixed more compilation warnings.
* programs/3d/window.cc: ditto.
* programs/crystal/atomsdlg.cc: ditto.
* programs/crystal/celldlg.cc: ditto.
* programs/crystal/cleavagesdlg.cc: ditto.
* programs/crystal/docprop.cc: ditto.
* programs/crystal/document.cc: ditto.
* programs/crystal/linesdlg.cc: ditto.
* programs/crystal/main.cc: ditto.
* programs/crystal/prefs.cc: ditto.
* programs/crystal/window.cc: ditto.
* programs/spectra/application.cc: ditto.
* programs/spectra/window.cc: ditto.
* programs/table/gchemtable-app.cc: ditto.
* programs/table/gchemtable-curve.cc: ditto.
* programs/table/gchemtable-data-allocator.cc: ditto.
* programs/table/gchemtable-data.cc: ditto.
* programs/table/gchemtable-main.cc: ditto.
2009-03-09 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/loaders/cdx/cdx.cc: fix integer loading on big endian machines.
2009-03-08 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/loaders/cdx/cdx.cc: fixed compilation warnings.
* plugins/loaders/cdxml/cdxml.cc: ditto.
* plugins/loaders/cif/cif.cc: ditto.
* plugins/loaders/cml/cml.cc: ditto.
* plugins/paint/arrows/curvedarrowtool.cc: ditto.
* plugins/paint/arrows/retrosynthesis.cc: ditto.
* plugins/paint/arrows/retrosynthesisstep.cc: ditto.
* plugins/paint/atoms/electrontool.cc: ditto.
* plugins/paint/bonds/bondtool.cc: ditto.
* plugins/paint/bonds/chaintool.cc: ditto.
* plugins/paint/residues/plugin.cc: ditto.
* plugins/paint/residues/pseudo-atom.h: ditto.
* plugins/paint/residues/residues-dlg.cc: ditto.
* plugins/paint/selection/group.cc: ditto.
* plugins/paint/selection/selectiontool.cc: ditto.
* plugins/paint/templates/gtkcombotoolitem.c:
(gtk_tool_combo_class_init), (gtk_tool_combo_init): ditto.
* plugins/paint/templates/templatetool.cc: ditto.
* plugins/paint/text/fragmenttool.cc: ditto.
* plugins/paint/text/texttool.cc: ditto.
* plugins/paint/wikipedia/plugin.cc: ditto.
2009-03-07 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/about.cc: fixed compilation warnings.
* libs/gcp/application.cc: ditto.
* libs/gcp/bond.cc: ditto.
* libs/gcp/docprop.cc: ditto.
* libs/gcp/document.cc: ditto.
* libs/gcp/fontsel.cc: ditto.
* libs/gcp/fragment-atom.cc: ditto.
* libs/gcp/fragment.cc: ditto.
* libs/gcp/mesomer.cc: ditto.
* libs/gcp/mesomery.cc: ditto.
* libs/gcp/molecule.cc: ditto.
* libs/gcp/plugin.cc: ditto.
* libs/gcp/preferences.cc: ditto.
* libs/gcp/reactant.cc: ditto.
* libs/gcp/reaction-arrow.cc: ditto.
* libs/gcp/reaction-operator.cc: ditto.
* libs/gcp/reaction-prop.cc: ditto.
* libs/gcp/reaction-step.cc: ditto.
* libs/gcp/stringdlg.cc: ditto.
* libs/gcp/target.cc: ditto.
* libs/gcp/text-object.cc: ditto.
* libs/gcp/tool.cc: ditto.
* libs/gcp/tool.h: ditto.
* libs/gcp/tools.cc: ditto.
* libs/gcp/view.cc: ditto.
* libs/gcp/window.cc: ditto.
* libs/gcu/atom.cc: ditto.
* libs/gcu/bond.cc: ditto.
* libs/gcu/cmd-context.cc: ditto.
* libs/gcu/crystalatom.cc: ditto.
* libs/gcu/crystaldoc.cc: ditto.
* libs/gcu/cycle.cc: ditto.
* libs/gcu/dialog.cc: ditto.
* libs/gcu/document.cc: ditto.
* libs/gcu/glview.cc: ditto.
* libs/gcu/gtkchem3dviewer.cc: ditto.
* libs/gcu/gtkcomboperiodic.c: (cb_screen_changed): ditto.
* libs/gcu/gtkcrystalviewer.cc: ditto.
* libs/gcu/gtkperiodic.c: (gtk_periodic_get_type),
(gtk_periodic_set_property): ditto.
* libs/gcu/gtkspectrumviewer.cc: ditto.
* libs/gcu/loader.cc: ditto.
* libs/gcu/molecule.cc: ditto.
* libs/gcu/object.cc: ditto.
* libs/gcu/print-setup-dlg.cc: ditto.
* libs/gcu/printable.cc: ditto.
* libs/gcu/spectrumdoc.cc: ditto.
* libs/gcu/spectrumview.cc: ditto.
2009-03-06 Jean Bréfort <jean.brefort@normalesup.org>
* glade/crystal/prefs.glade: set page size to 0 for spin buttons to
avoid a warning when using gtk+-2 >= 2.14.0.
* glade/crystal/view-settings.glade: ditto.
* glade/image-resolution.glade: ditto.
* glade/image-size.glade: ditto.
* glade/paint/preferences.glade: ditto.
* glade/paint/zoom.glade: ditto.
* glade/print-setup.glade: ditto.
* glade/table/state-thermometer.glade: ditto.
* plugins/paint/arrows/arrowtool.glade: ditto.
* plugins/paint/bonds/bond.glade: ditto.
* plugins/paint/bonds/chain.glade: ditto.
* plugins/paint/cycles/cycle.glade: ditto.
* plugins/paint/cycles/cyclen.glade: ditto.
* plugins/paint/selection/group.glade: ditto.
* plugins/paint/text/fontsel.glade: ditto.
2009-03-06 Daniel Leidert <daniel.leidert@wgdd.de>
* goffice/gchemutils.cc: Fixed FSF address.
* goffice/gchemutils.h: ditto.
* goffice/gchemutils-priv.h: ditto.
* goffice/gogcpapp.cc: ditto.
* goffice/gogcpapp.h: ditto.
* goffice/gogcpwin.cc: ditto.
* goffice/gogcpwin.h: ditto.
* goffice/gogcuapp.cc: ditto.
* goffice/gogcuapp.h: ditto.
* libs/gccv/cc-rich-text.h: ditto.
* libs/gcp/about.cc: ditto.
* libs/gcp/window.cc: ditto.
* libs/gcp/window.h: ditto.
* mozilla-plugin/moz-plugin.c: ditto.
* programs/3d/main.cc: ditto.
* programs/crystal/application.cc: ditto.
* programs/crystal/application.h: ditto.
* programs/crystal/atom.cc: ditto.
* programs/crystal/atom.h: ditto.
* programs/crystal/atomsdlg.cc: ditto.
* programs/crystal/atomsdlg.h: ditto.
* programs/crystal/celldlg.cc: ditto.
* programs/crystal/celldlg.h: ditto.
* programs/crystal/cleavage.cc: ditto.
* programs/crystal/cleavage.h: ditto.
* programs/crystal/cleavagesdlg.cc: ditto.
* programs/crystal/cleavagesdlg.h: ditto.
* programs/crystal/document.cc: ditto.
* programs/crystal/document.h: ditto.
* programs/crystal/gcrystal.h: ditto.
* programs/crystal/globals.h: ditto.
* programs/crystal/line.cc: ditto.
* programs/crystal/line.h: ditto.
* programs/crystal/linesdlg.cc: ditto.
* programs/crystal/linesdlg.h: ditto.
* programs/crystal/main.cc: ditto.
* programs/crystal/prefs.cc: ditto.
* programs/crystal/prefs.h: ditto.
* programs/crystal/sizedlg.cc: ditto.
* programs/crystal/sizedlg.h: ditto.
* programs/crystal/view.cc: ditto.
* programs/crystal/view.h: ditto.
* programs/crystal/view-settings.cc: ditto.
* programs/crystal/view-settings.h: ditto.
* programs/crystal/window.cc: ditto.
* programs/crystal/window.h: ditto.
* programs/table/gchemtable-app.cc: ditto.
* programs/table/gchemtable-app.h: ditto.
* programs/table/gchemtable-curve.cc: ditto.
* programs/table/gchemtable-curve.h: ditto.
* programs/table/gchemtable-data-allocator.cc: ditto.
* programs/table/gchemtable-data-allocator.h: ditto.
* programs/table/gchemtable-data.cc: ditto.
* programs/table/gchemtable-data.h: ditto.
* programs/table/gchemtable-elt.cc: ditto.
* programs/table/gchemtable-elt.h: ditto.
* programs/table/gchemtable-graph-editor.cc: ditto.
* programs/table/gchemtable-graph-editor.h: ditto.
* programs/table/gchemtable-main.cc: ditto.
* tests/testgtkchem3dviewer.c: ditto.
* tests/testgtkcrystalviewer.c: ditto.
* tests/testgtkperiodic.c: ditto.
2009-03-06 Daniel Leidert <daniel.leidert@wgdd.de>
* plugins/loaders/cdx/Makefile.am: We don't need two *dir variables.
Make the code a bit easier (also to avoid typos).
* plugins/loaders/cdxml/Makefile.am: ditto.
* plugins/loaders/cif/Makefile.am: ditto.
* plugins/loaders/cml/Makefile.am: ditto.
2009-03-05 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: needs goffice >= 0.7.3 and remove any direct call to
gconf or gnome API.
* goffice/Makefile.am: ditto.
* libs/gcp/application.cc: ditto.
* libs/gcp/application.h: ditto.
* libs/gcp/preferences.cc: ditto.
* libs/gcp/theme.cc: ditto.
* libs/gcp/theme.h: ditto.
* libs/gcu/application.cc: ditto.
* libs/gcu/application.h: ditto.
* libs/gcu/filechooser.cc: ditto.
* libs/gcu/glview.cc: ditto.
* libs/gcu/glview.h: ditto.
* libs/gcu/macros.h: ditto.
* libs/gcu/printable.cc: ditto.
* mozilla-plugin/Makefile.am: ditto.
* mozilla-plugin/chem-viewer.cc: ditto.
* plugins/paint/arrows/arrowtool.cc: ditto.
* plugins/paint/arrows/plugin.cc: ditto.
* programs/3d/main.cc: ditto.
* programs/calc/gchemcalc.cc: ditto.
* programs/crystal/globals.h: ditto.
* programs/crystal/main.cc: ditto.
* programs/crystal/prefs.cc: ditto.
* programs/paint/main.cc: ditto.
* programs/spectra/gspectrum.cc: ditto.
* tests/testgtkchem3dviewer.c: (main): ditto.
* tests/testgtkperiodic.c: (on_changed), (main): fixed compilation
with gtk+-2.14.x.
2009-03-04 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: try removing as many unused direct shlib dependency
as possible. [#20617]
* glade/crystal/atoms.glade: set page size to 0 for spin buttons to
avoid a warning when using gtk+-2 >= 2.14.0.
* goffice/Makefile.am: fixes for #20617.
* libs/gccv/Makefile.am: ditto.
* libs/gccv/text-tag.cc: add new tags.
* libs/gccv/text-tag.h: ditto.
* libs/gcp/Makefile.am: fixes for #20617.
* libs/gcp/application.cc: don't call exit in a library. [#25686]
* libs/gcp/application.h: ditto.
* libs/gcp/window.cc: ditto.
* libs/gcp/window.h: ditto.
* libs/gcu/Makefile.am: fixes for #20617.
* libs/gcu/application.cc: store current directory as an URI.
* libs/gcu/application.h: make Printable a virtual parent class.
* libs/gcu/glview.cc: don't call exit in a library. [#25686]
* libs/gcu/glview.h: ditto.
* libs/gcu/residue.h: add G_GNUC_UNUSED flags when needed.
* mozilla-plugin/Makefile.am: fixes for #20617.
* plugins/loaders/cdx/Makefile.am: ditto.
* plugins/loaders/cdxml/Makefile.am: ditto.
* plugins/loaders/cif/Makefile.am: ditto.
* plugins/loaders/cml/Makefile.am: ditto.
* plugins/paint/arrows/Makefile.am: ditto.
* plugins/paint/atoms/Makefile.am: ditto.
* plugins/paint/bonds/Makefile.am: ditto.
* plugins/paint/cycles/Makefile.am: ditto.
* plugins/paint/residues/Makefile.am: ditto.
* plugins/paint/selection/Makefile.am: ditto.
* plugins/paint/templates/Makefile.am: ditto.
* plugins/paint/text/Makefile.am: ditto.
* plugins/paint/wikipedia/Makefile.am: ditto.
* programs/3d/Makefile.am: ditto.
* programs/calc/Makefile.am: ditto.
* programs/calc/gchemcalc.cc: exits more cleanly (avoids a goffice
critical) and add G_GNUC_UNUSED flags when needed.
* programs/crystal/Makefile.am: fixes for #20617.
* programs/paint/Makefile.am: ditto.
* programs/spectra/Makefile.am: ditto.
* programs/spectra/document.h: remove unused OpenBabel namespace.
* programs/table/Makefile.am: fixes for #20617.
* tests/Makefile.am: ditto.
2009-03-03 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: some reimplementation of size evaluation.
* libs/gcp/preferences.cc: make compilation against gtk+-2.14.x succeed.
* libs/gcp/tools.cc: ditto.
* plugins/paint/atoms/electrontool.cc: reimplemented using the new canvas.
* programs/crystal/atomsdlg.cc: make compilation against gtk+-2.14.x
succeed.
* programs/crystal/cleavagesdlg.cc: ditto.
* programs/crystal/document.cc: use the label to name the current file,
not the title which might not exist.
* programs/crystal/linesdlg.cc: make compilation against gtk+-2.14.x
succeed.
* programs/crystal/window.cc: ditto.
* programs/table/gchemtable-app.cc: ditto.
2009-03-01 Daniel Leidert <daniel.leidert@wgdd.de>
* Makefile.am (MAINTAINERCLEANFILES): Added intltool*.in templates.
2009-03-01 Daniel Leidert <daniel.leidert@wgdd.de>
* gendocs: Grep for lines beginning with DOC_MODULE.
* docs/help/3d/Makefile.am (MAINTAINERCLEANFILES): Remove versioned
files created by gendocs.
* docs/help/calc/Makefile.am (MAINTAINERCLEANFILES): Ditto.
* docs/help/crystal/Makefile.am (MAINTAINERCLEANFILES): Ditto.
* docs/help/paint/Makefile.am (MAINTAINERCLEANFILES): Ditto.
* docs/help/spectra/Makefile.am (MAINTAINERCLEANFILES): Ditto.
* docs/help/table/Makefile.am (MAINTAINERCLEANFILES): Ditto.
* plugins/loaders/cif/Makefile.am (xmldir): Fixed.
2009-02-25 Daniel Leidert <daniel.leidert@wgdd.de>
* configure.ac: Also check for iceape-plugin.pc.
* Makefile.am (schemasdir): Use $(GCONF_SCHEMA_FILE_DIR).
* programs/paint/Makefile.am (schemasdir): ditto.
* pixmaps/Makefile.am: The `gnome-mime-' prefix for MIME type icons is
obsolete.
2009-02-25 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: add check for npfunctions.h.
* libs/gcu/element.cc: fix compilation with gcc-4.4. [#25628]
* libs/gcu/spectrumdoc.cc: ditto.
* mozilla-plugin/moz-plugin.c: (ChemNew): compiles with the new
xulrunner API. [see #25628]
2009-02-06 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text-tag.cc: reimplemented subscripts.
* libs/gccv/text-tag.h: ditto.
* libs/gccv/text.cc: ditto.
* libs/gccv/text.h: ditto.
* libs/gcp/atom.cc: disply again attached hydrogens number as a
subscript.
2009-02-01 Jean Bréfort <jean.brefort@normalesup.org>
* docs/reference/Makefile.am: do not install API docs.
* libs/gccv/text.cc: do not end with unfinished cairo paths.
2009-01-28 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/bezier-arrow.cc: first implementation for bounds.
* libs/gccv/text.cc: fixed run length (must be in bytes, not chars).
2009-01-21 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/Makefile.am: add new files.
* libs/gccv/arrow.cc: set default values for arrow head shape.
* libs/gccv/arrow.h: moved ArrowHead enum to structs.h.
* libs/gccv/bezier-arrow.cc: new bezier cubic curve based arrows (not yet
functional).
* libs/gccv/bezier-arrow.h: ditto.
* libs/gccv/structs.h: moved ArrowHead enum to structs.h.
* libs/gccv/text.cc: some work on rich text.
* libs/gcp/text.cc: set the default font description.
2009-01-18 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/bond.cc: one more double bond position fix.
2009-01-15 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/Makefile.am: add a cursor pixbuf.
* libs/gcp/application.cc: add a cursors collection.
* libs/gcp/application.h: ditto.
* libs/gcp/tool.cc: implement Tool::OnMotion to enable context sensitive
cursors.
* libs/gcp/tool.h: ditto.
* libs/gcp/view.cc: call Tool::OnMotion when appropriate.
* plugins/paint/arrows/curvedarrowtool.cc: Implement OnMotion.
* plugins/paint/arrows/curvedarrowtool.h: ditto.
* plugins/paint/arrows/plugin.cc: Activate curved arrow tools.
2009-01-14 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text.cc: implement very basic text edition.
* libs/gccv/text.h: ditto.
* libs/gcp/text.cc: use gccv::Anchor.
* plugins/paint/text/texttool.cc: call gccv::Text::OnKeyPressed when
appropriate.
2009-01-11 Jean Bréfort <jean.brefort@normalesup.org>
* AUTHORS: added the brasilian translator.
* *.h, *.c, *.cc: fixed FSF address.
2009-01-07 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/canvas.cc: directly call static methods as callbacks.
2009-01-02 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/document.cc: changed gcu::Printable API so that it passes
the page number to DoPrint.
* libs/gcp/document.h: ditto.
* libs/gcu/application.cc: ditto.
* libs/gcu/glview.cc: ditto.
* libs/gcu/glview.h: ditto.
* libs/gcu/printable.cc: ditto.
* libs/gcu/printable.h: ditto.
* libs/gcu/spectrumdoc.cc: ditto.
* libs/gcu/spectrumdoc.h: ditto.
* programs/calc/gchemcalc.cc: ditto.
* programs/table/gchemtable-curve.cc: ditto.
* programs/table/gchemtable-curve.h: ditto.
* libs/gcu/loader.cc: changed API to be able to export just one object
instead of the whole document.
* libs/gcu/loader.h: ditto.
* plugins/loaders/cdx/cdx.cc: ditto.
* plugins/loaders/cdxml/cdxml.cc: ditto.
* plugins/loaders/cif/cif.cc: ditto.
* plugins/loaders/cml/cml.cc: ditto.
2009-01-01 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/atom.cc: export formal charge.
* plugins/loaders/cml/cml.cc: ditto and import stereochemistry.
2008-12-31 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: set a correct scale after a call to
Application::Load.
* libs/gcp/bond.cc: export properties.
* libs/gcp/bond.h: ditto.
* libs/gcp/document.cc: save using the gcu::Loader mechanism when relevant.
* libs/gcp/molecule.cc: fix stereochemistry for InChI and SMILES output.
* libs/gcu/application.cc: use a const document when saving.
* libs/gcu/application.h:
* libs/gcu/atom.cc: export more properties.
* libs/gcu/bond.cc: export properties.
* libs/gcu/bond.h: ditto.
* plugins/loaders/cml/cml.cc: writing now nearly as good as the OpenBabel
using version.
2008-12-25 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: add content type detection in the gcu::Loader
reading mechanism and a content type parameter for writing.
* libs/gcp/document.cc: ditto.
* libs/gcu/Makefile.am: ditto.
* libs/gcu/application.cc: ditto.
* libs/gcu/application.h: ditto.
* libs/gcu/loader.cc: ditto.
* libs/gcu/loader.h: ditto.
* libs/gcu/structs.h: ditto.
* libs/gcu/atom.cc: add new properties.
* libs/gcu/bond.cc: ditto.
* libs/gcu/document.h: ditto.
* libs/gcu/objprops.h: ditto.
* plugins/loaders/cdx/cdx.cc: updated to the new API.
* plugins/loaders/cdxml/cdxml.cc: ditto.
* plugins/loaders/cif/cif.cc: ditto.
* plugins/loaders/cml/cml.cc: some work on both reading and writing.
2008-12-24 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text-tag.cc: add a priority field.
* libs/gccv/text-tag.h: ditto.
* libs/gccv/text.cc: introduced runs.
* libs/gccv/text.h: ditto.
* libs/gcp/atom.cc: add attached hydrogen numbers.
* libs/gcp/tools.cc: removed deprecated gtk tooltips calls.
* libs/gcp/window.cc: ditto.
* libs/gcp/zoomdlg.cc: fix spin button callback behavior.
* plugins/paint/selection/selectiontool.cc: removed deprecated
gtk tooltips calls.
* plugins/paint/text/texttool.cc: use gccv::Text::GetText instead
of pango layout access.
2008-12-19 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.11.1).
* libs/gcp/view.cc: fix atom nature change using keyboard.
* libs/gcp/view.h: ditto.
* libs/gcu/Makefile.am: import space groups support from OpenBabel.
* libs/gcu/matrix.cc: ditto.
* libs/gcu/matrix.h: ditto.
* libs/gcu/spacegroup.cc: ditto.
* libs/gcu/spacegroup.h: ditto.
* libs/gcu/transform3d.cc: ditto.
* libs/gcu/transform3d.h: ditto.
* libs/gcu/vector.cc: ditto.
* libs/gcu/vector.h: ditto.
* plugins/loaders/Makefile.am: new CIF loader skeleton.
* plugins/loaders/cif/Makefile.am: ditto.
* plugins/loaders/cif/cif.cc: ditto.
* plugins/loaders/cif/plugin.xml.in: ditto.
* plugins/loaders/cml/plugin.xml.in: add 3d and crystal support claims.
* plugins/paint/atoms/elementtool.cc: fix update of bonds.
2008-12-16 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text.cc: fixed east/west alignment.
* libs/gcp/atom.cc: add attached hydrogen (not the number yet).
* libs/gcp/view.cc: new H width helper API.
* libs/gcp/view.h: ditto.
2008-12-15 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/Makefile.am: add new files.
* libs/gccv/text.cc: preliminary work for rich text.
* libs/gccv/text.h: ditto.
* libs/gccv/text-tag.cc: ditto.
* libs/gccv/text-tag.h: ditto.
* libs/gcp/atom.cc: preliminary work on attached hydrogens
* libs/gcp/bond.cc: changed a comment.
* libs/gcp/view.cc: reimplement BuildSVG (needed by the clipboard), and
implement View::BuildEPS.
* libs/gcp/view.h: ditto.
* libs/gcp/widgetdata.cc: ditto.
2008-12-14 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/canvas.cc: render crossing bonds for normal bonds
* libs/gccv/canvas.h: ditto.
* libs/gccv/group.cc: ditto.
* libs/gccv/group.h: ditto.
* libs/gccv/item.cc: ditto.
* libs/gccv/item.h: ditto.
* libs/gccv/line.cc: ditto.
* libs/gcp/bond.cc: ditto.
* libs/gcp/view.cc: use cairo for svg export.
* libs/gcp/view.h: ditto.
* libs/gcu/macros.h: add a missing const keyword.
2008-12-05 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/text.cc: implement cursor blinking.
* libs/gccv/text.h: ditto.
* libs/gcp/text.cc: implement Text::AddItem.
* libs/gcp/view.cc: reimplement Vieww::ShowCursor.
* plugins/paint/text/texttool.cc: Reimplement TextTool::OnClicked.
2008-12-04 Jean Bréfort <jean.brefort@normalesup.org>
* glade/image-resolution.glade: add optional transparency for
GChemPaint image export.
* libs/gccv/item.cc: removed a printf debug.
* libs/gcp/view.cc: add optional transparency for
GChemPaint image export.
* libs/gcu/application.cc: ditto.
* libs/gcu/application.h: ditto.
2008-12-03 Jean Bréfort <jean.brefort@normalesup.org>
* programs/crystal/document.cc: fix loading CIF files.
2008-12-02 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/canvas.cc: removed unuseful stuff and do not invalidate
areas with negative coordinates.
* libs/gccv/canvas.h: removed unuseful stuff.
* libs/gccv/group.cc: add children translation capability.
* libs/gccv/group.h: ditto.
* libs/gccv/item.cc: ditto.
* libs/gccv/rectangle.cc: don't change Item::m_x0 and friends in Distance.
* libs/gccv/text.cc: remove extra braces.
* libs/gcp/atom.cc: set the coordinates for the items group, and use
relative coordinates for others.
* libs/gcp/tool.cc: fixed resizing of view.
* libs/gcp/view.cc: reimplemented scrolling.
* libs/gcp/view.h: ditto.
* mozilla-plugin/chem-viewer.cc: support cdx and cdxml files.
* mozilla-plugin/moz-plugin.c: ditto.
2008-12-01 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: don't change tool if Tool::Deactivate returns
false.
* libs/gcp/document.cc: fix a possible crasher.
2008-11-30 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: restored selection.
2008-11-29 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: unescape uri before displaying it.
* libs/gcp/stringdlg.cc: ditto.
* plugins/paint/wikipedia/wikipediatool.cc: ditto.
* programs/crystal/application.cc: ditto.
* programs/crystal/document.cc: ditto.
* programs/spectra/document.cc: ditto.
2008-11-28 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: unescape uri before displaying it.
* libs/gcp/document.cc: ditto.
* libs/gcp/stringdlg.cc: ditto.
* programs/3d/application.cc: ditto.
* programs/3d/document.cc: ditto.
* programs/calc/gchemcalc.cc: ditto.
* programs/crystal/application.cc: ditto.
* programs/crystal/document.cc: ditto.
* programs/spectra/application.cc: ditto.
* programs/table/gchemtable-app.cc: ditto.
2008-11-26 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/fragment.cc: fixed issues when loading a fragment with
a residue.
* libs/gcp/molecule.cc: ditto.
* libs/gcu/document.h: fixed typo in documentation.
2008-11-24 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/canvas.cc: implement zoom.
* libs/gccv/canvas.h: ditto.
* libs/gccv/rectangle.cc: don't create a path for a transparent rectangle.
* libs/gcp/document.cc: reimplement printing.
* libs/gcp/view.cc: reimplement pdf, ps and eps exports.
* libs/gcu/application.cc: add a new icon name member, and do not
set default icon name for the application.
* libs/gcu/application.h: ditto.
* libs/gcu/dialog.cc: correctly set the icon name.
* plugins/paint/templates/templatetool.cc: zoom the templates so
that it fits in the preview, and update all positions.
2008-11-23 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/arrow.cc: fixed returned item in Distance().
* libs/gccv/circle.cc: ditto.
* libs/gccv/line.cc: ditto.
* libs/gccv/poly-line.cc: ditto.
* libs/gccv/rectangle.cc: ditto.
* libs/gccv/rectangle.h: add a new GetPosition method.
* libs/gccv/squiggle.cc: fixed returned item in Distance().
* libs/gccv/text.cc: make things work minimally.
* libs/gccv/text.h: ditto.
* libs/gccv/wedge.cc: fixed returned item in Distance().
* libs/gcp/atom.cc: add the symbol to the canvas.
* libs/gcp/atom.h: removed unused UpdateItem() for now.
* libs/gcp/bond.cc: make bonds a little longer now that symbols are
correctly centered.
* plugins/loaders/cml/cml.cc: wrote some preliminary code.
* plugins/paint/atoms/elementtool.cc: fixed dragging.
2008-11-22 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gchemutils.cc: removed #ifdef ENABLE_NLS.
* libs/gccv/Makefile.am: add new files.
* libs/gccv/arrow.cc: implement Arrow::Distance.
* libs/gccv/arrow.h: remove Arrow::Move, the Line class method is enough.
* libs/gccv/item-client.cc: implement a default for UpdateItem ().
* libs/gccv/line.cc: set line cap.
* libs/gccv/poly-line.cc: new poly segments line.
* libs/gccv/poly-line.h: ditto.
* libs/gccv/structs.h: fixed file name in copyright.
* libs/gcu/element.cc: removed #ifdef ENABLE_NLS.
* plugins/loaders/cdx/cdx.cc: ditto.
* plugins/loaders/cdxml/cdxml.cc: ditto.
* plugins/paint/arrows/arrowtool.cc: fully reimplemented.
* plugins/paint/arrows/retrosynthesisarrow.cc: reimplemented.
* plugins/paint/arrows/retrosynthesisarrow.h: ditto.
2008-11-21 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/arrow.cc: add half heads support.
* libs/gccv/canvas.cc: allow setting the background color.
* libs/gccv/canvas.h: ditto.
* libs/gcp/application.cc: cleaned out an unused local variable.
* libs/gcp/application.h: make m_Style accessible.
* libs/gcp/arrow.cc: rewrite selection for complex arrows.
* libs/gcp/mesomery-arrow.cc: reimplemented.
* libs/gcp/reaction-arrow.cc: ditto.
* libs/gcp/view.cc: sets the canvas background color to white.
* plugins/paint/arrows/arrowtool.cc: reimplement more arrow types.
2008-11-20 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/arrow.cc: draw simple arrows.
* libs/gccv/arrow.h: ditto.
* libs/gccv/line.h: ditto.
* libs/gcp/reaction-arrow.cc: ditto.
* plugins/paint/arrows/arrowtool.cc: ditto.
2008-11-18 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: don't crash or end in an infinite loop when adding
a fourth bond to phophorus. [#24863]
2008-11-17 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/bonds/bondtool.cc: fix undo when adding a bond between two
molecules.
2008-11-16 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/Makefile.am: added new files.
* libs/gccv/arrow.cc: initial work on arrows.
* libs/gccv/arrow.h: ditto.
* libs/gccv/canvas.cc: fixed path in copyright.
* libs/gccv/canvas.h: ditto.
* libs/gccv/circle.cc: new item.
* libs/gccv/circle.h:ditto.
* libs/gccv/client.cc: fixed path in copyright.
* libs/gccv/client.h: ditto.
* libs/gccv/fill-item.cc: ditto.
* libs/gccv/fill-item.h: ditto.
* libs/gccv/group.cc: ditto.
* libs/gccv/group.h: ditto.
* libs/gccv/hash.cc: ditto.
* libs/gccv/hash.h: ditto.
* libs/gccv/item-client.cc: ditto.
* libs/gccv/item-client.h: ditto.
* libs/gccv/item.cc: ditto.
* libs/gccv/item.h: ditto.
* libs/gccv/line-item.cc: ditto.
* libs/gccv/line-item.h: ditto.
* libs/gccv/line.cc: ditto.
* libs/gccv/line.h: ditto.
* libs/gccv/rectangle.cc: ditto.
* libs/gccv/rectangle.h: ditto.
* libs/gccv/squiggle.cc: ditto.
* libs/gccv/squiggle.h: ditto.
* libs/gccv/structs.h: ditto.
* libs/gccv/text.cc: ditto.
* libs/gccv/text.h: ditto.
* libs/gccv/wedge.cc: ditto.
* libs/gccv/wedge.h: ditto.
* libs/gcp/bond.cc: fixed second line position for some double bonds.
* libs/gcp/document.cc: don't update items when there is no canvas.
* libs/gcp/theme.cc: call g_type_init.
* libs/gcu/object.h: fixed documentation.
* libs/gcu/residue.cc: don't free lang before using it.
* plugins/paint/residues/pseudo-atom.cc: reimplemented drawing.
* plugins/paint/selection/selectiontool.cc: display an error message box
instead crashing when a group creation failed.
2008-11-15 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/Makefile.am: ad squiggle.*.
* libs/gccv/hash.h: remove unneeded semicolons.
* libs/gccv/squiggle.cc: new item for "squiggle" bonds.
* libs/gccv/squiggle.h: ditto.
* libs/gccv/wedge.h: remove unneeded semicolons.
* libs/gcp/bond.cc: reimplemented squiggle bonds.
* plugins/paint/bonds/bondtool.cc: ditto.
2008-11-14 Jordan Mantha <laserjock@ubuntu.com>
* libs/gcu/spectrumview.cc: implement y-axis adjustment
* libs/gcu/spectrumview.h: ditto
* libs/gcu/spectrumdoc.cc: ditto
2008-11-14 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/Makefile.am: add hash.*.
* libs/gccv/hash.cc: new item for "hash" bonds.
* libs/gccv/hash.h: ditto.
* libs/gccv/line.cc: fixed bounds.
* libs/gccv/wedge.cc: implemnted Wedge::Distanc().
* libs/gccv/wedge.h: made some members protected instead of private.
* libs/gcp/bond.cc: reimplement more bond types.
* libs/gcp/view.cc: increase the canvas gap to 3 to ease selection.
* libs/gcu/spectrumview.cc: on_max_changed calls OnMaxChanged.
* plugins/paint/bonds/bondtool.cc: reimplement more bond types.
2008-11-12 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/spectrumdoc.cc: enhance data loading [#24719] and always
update the invert axis check box.
* plugins/paint/bonds/bondtool.h: removed a commented out member.
2008-11-11 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/document.cc: delete previous version when saving.
* libs/gcu/object.cc: remove objects from dirty objects list when
destroying.
* plugins/paint/bonds/chaintool.cc: fixed when the chain starts from a
new atom.
* plugins/paint/cycles/cycletool.cc: reimplemented.
* programs/crystal/document.cc: delete previous version when saving.
2008-11-10 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/bond.cc: prefer a cycle with cis configuration when drawing
double bonds. [#24802]
2008-11-10 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/cycles/cycletool.cc: partially reimplemented.
* plugins/paint/cycles/cycletool.h: ditto.
2008-11-09 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/bonds/bondtool.cc: don't allow bonds between molecules not
in the same group.
* plugins/paint/bonds/chaintool.cc: ditto.
2008-11-08 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/structs.h: add Point struct.
* libs/gcp/view.cc: fixed objects remove.
* plugins/paint/bonds/bondtool.cc: removed unused local variables.
* plugins/paint/bonds/bondtool.h: remove a wrong declaration.
* plugins/paint/bonds/chaintool.cc: reimplemented, and fixed undo
and unallowed operations issues.
* plugins/paint/bonds/chaintool.h: added gcpChainTool::Draw() method.
2008-11-07 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/item-client.h: enhance client retreival.
* libs/gccv/item.cc: fixed a potential crasher/leak.
* libs/gcp/view.cc: added View::SetSelectionState().
* libs/gcp/view.h: ditto.
* libs/gcp/widgetdata.cc: reimplemnted selection and object bounds.
* plugins/paint/bonds/bondtool.cc: cleaned BondTool::OnDrag() and
BondTool::OnRelease().
* plugins/paint/selection/selectiontool.cc: mostly reimplemented to
use the new canvas.
2008-11-06 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gccv/canvas.cc: add Canvas::GetItemAt.
* libs/gccv/canvas.h: ditto.
* libs/gccv/item-client.cc: delete the item when destroyed.
* libs/gccv/item-client.h: add Item as friend class.
* libs/gccv/item.cc: unregister from client when deleted.
* libs/gcp/view.cc: reimplement View::Remove
* plugins/paint/selection/erasertool.cc: reimplemented.
2008-11-05 Jean Bréfort <jean.brefort@normalesup.org>
* docs/reference/Doxyfile.in: add libs/gccv directory.
* libs/gccv/Makefile.am: add wedge.*.
* libs/gccv/canvas.cc: made event methods really private.
* libs/gccv/canvas.h: ditto, and added API documentation.
* libs/gccv/text.h: initial API documentation.
* libs/gccv/wedge.cc: new item for "wedge" bonds.
* libs/gccv/wedge.h: ditto.
* libs/gcp/bond.cc: reimplement "wedge" bonds.
* libs/gcp/bond.h: fixed API documentation.
* libs/gcp/molecule.h: ditto.
* libs/gcp/view.h: ditto.
* libs/gcu/chemistry.h: added gccv namespace to API documentation.
* plugins/paint/bonds/bondtool.cc: worked on the "wedge" bond tool.
2008-11-04 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: add back -DG_DISABLE_DEPRECATED and friends.
* libs/gccv/text.cc: fixed vertical alignment.
* libs/gccv/text.h: add gccv::Anchor enum.
* libs/gcp/bond.cc: implement Bond::UpdateItm().
* libs/gcp/view.cc: replace the current object by an atom when possible.
* plugins/paint/atoms/elementtool.cc: ElemenTool::OnClicked fully
reimplemented.
* plugins/paint/bonds/bondtool.cc: reimplement bond order changes and
use of an existing atom for bond start point.
2008-11-03 Jean Bréfort <jean.brefort@normalesup.org>
* mozilla-plugin/chem-viewer.cc: convert filename to uri when needed.
2008-11-01 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: do not request gnome builds for goffice >= 0.7.3.
* libs/gccv/item.h: added a macro for properties changing the size
or position.
* libs/gccv/rectangle.cc: added Rectangle::GetPosition.
* libs/gccv/rectangle.h: ditto.
* libs/gccv/text.cc: updates the rectangle.
* libs/gccv/text.h: ditto.
* libs/gcu/spectrumdoc.cc: correctly load negative values in
(XY..XY) tables. [#24720]
* plugins/paint/atoms/elementtool.cc: reimplementation of the OnClicked
method to work with the new canvas.
2008-10-31 Jean Bréfort <jean.brefort@normalesup.org>
* all: moved libs/canvas to libs/gccv and rename libgchempaint to libgcp
for more consistency.
2008-10-31 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/loaders/cml/Makefile.am: new cml loader.
* plugins/loaders/cml/cml.cc: ditto.
* plugins/loaders/cml/plugin.xml.in: ditto.
2008-10-31 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post branching version bump (0.11.0).
* others: start implementing the new canvas and make things compile
without libgnomecanvas.
2008-10-31 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: changed version to 0.10.0 for release.
* libs/gcp/fragment-atom.h: fixed API documentation.
* libs/gcp/text.h: ditto.
* libs/gcp/view.h: add missing API documentation.
2008-10-26 Jean Bréfort <jean.brefort@normalesup.org>
* programs/table/gchemtable-app.cc: implement save as image for curves.
* programs/table/gchemtable-app.h: ditto.
* programs/table/gchemtable-curve.cc: ditto.
* programs/table/gchemtable-curve.h: ditto.
2008-10-25 Jordan Mantha <laserjock@ubuntu.com>
* docs/help/spectra/C/gspectrum.xml: miscellaneous typo and style fixes.
Also changed mixed DOS/Unix line endings to Unix.
2008-10-24 Jordan Mantha <laserjock@ubuntu.com>
* docs/help/table/C/gchemtable.xml: miscellaneous typo and style fixes.
2008-10-23 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/fragment.cc: check if Fragment::m_Atom is not NULL before
using it.
2008-10-18 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.9.99).
2008-10-22 Jean Bréfort <jean.brefort@normalesup.org>
* programs/table/gchemtable-curve.cc: sets the application as owner for
the dialog (fixes a memory leak), and add help support to the graph guru.
* programs/table/gchemtable-data.cc: fix minimum and maximum for a series
when the first element is not a number.
* docs/help/table/C/gchemtable.xml: partially update documentation.
* docs/help/table/C/figures/*.png: new updated screenshots.
2008-10-19 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/table/C/gchemtable.xml: partially update documentation.
* docs/help/table/C/figures/*.png: new or updated screenshots.
2008-10-18 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.9.94).
2008-10-18 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/calc/C/gchemcalc.xml: added more documentation.
* docs/help/calc/C/figures/uv-vis-tools.png: new screenshot.
* docs/help/spectra/C/gspectrum.xml: wrote documentation for 0.10.
2008-10-17 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gogcpapp.cc: fix embedded object height.
* libs/gcu/spectrumdoc.cc: fix the origin for varian nmr dx files.
* libs/gcu/spectrumdoc.h: ditto.
* docs/help/spectra/C/figures/*: new screenshots.
2008-10-14 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/fragment-atom.cc: ensure symbol geometry is always
evaluated.
* libs/gcp/molecule.cc: fix contextual menu issues.
* libs/gcp/view.cc: enable selection of an atom even without a
visible item.
* libs/gcu/atom.cc: initalize Z to -1. to avoid confusion with
pseudo-atoms.
* plugins/paint/bonds/bondtool.cc: enable merging with atoms even
without a visible item.
* plugins/paint/cycles/cycletool.cc: ditto.
2008-10-12 Jean Bréfort <jean.brefort@normalesup.org>
* docs/reference/Doxyfile.in: add an image path.
* libs/gcp/fontsel.h: add a screenshot to the documentation.
* libs/gcp/theme.h: API documentation work (done for 0.10).
2008-10-08 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/reaction-arrow.cc: update position and length when the
attached object changes.
* libs/gcp/reaction-arrow.h: ditto.
* libs/gcp/settings.h: API documentation work.
* libs/gcp/theme.h: ditto.
* libs/gcp/tool.h: ditto.
2008-10-05 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/molecule.cc: removed unuseful SetSelected method.
* libs/gcp/molecule.h: API documentation work.
* libs/gcp/preferences.cc: made most methods private and replace them
by a private friend class.
* libs/gcp/preferences.h: ditto.
* libs/gcp/reaction-prop.h: API documentation work.
* libs/gcp/settings.h: ditto.
* libs/gcp/stringdlg.h: ditto.
* libs/gcp/text.h: ditto.
* libs/gcp/tool.cc: ditto.
* libs/gcp/tool.h: ditto.
* libs/gcp/view.h: ditto.
* libs/gcu/atom.h: ditto.
* libs/gcu/object.h: ditto.
2008-09-29 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.9.93).
2008-09-28 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/crystal/C/gcrystal.xml: fixed validation.
2008-09-28 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/calc/C/gchemcalc.xml: added missing tags.
2008-09-28 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/3d/C/gchem3d.xml: fixed typo which made it fail
validation.
2008-09-28 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/crystal/*: updated Gnome Crystal help.
* libs/gcp/reactant.h: API documentation work.
* libs/gcp/reaction-arrow.h: ditto.
* libs/gcp/reaction-operator.h: ditto.
* libs/gcp/reaction-prop-dlg.h: ditto.
* libs/gcp/reaction-prop.h: ditto.
* libs/gcp/reaction-step.h: ditto.
* libs/gcp/reaction.h: ditto.
2008-09-27 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: use theme colors for tools icons.
* libs/gcp/application.h: ditto.
* libs/gcp/atom.h: API documentation work.
* libs/gcp/bond.h: ditto.
* libs/gcp/fragment.h: ditto.
* libs/gcp/mesomer.h: ditto.
* libs/gcp/mesomery-arrow.h: ditto.
* libs/gcp/mesomery.h: ditto.
* libs/gcp/molecule.h: ditto.
* libs/gcp/newfiledlg.h: ditto.
* libs/gcp/plugin.cc: ditto.
* libs/gcp/plugin.h: ditto.
* libs/gcp/reaction-arrow.h: ditto.
* libs/gcp/text.h: ditto.
* plugins/paint/*/*.png: use transparency instead of grey level. [#24382]
2008-09-21 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/stringdlg.cc: use "SMILES" instead of "Smiles".
* docs/help/*: applications documentation work.
2008-09-18 Julian Sikorski <belegdol@gmail.com>
* plugins/paint/residues/residues.glade: worked around "Name" translation problem.
2008-09-17 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/dialog.cc: do not set the application as default owner.
2008-09-16 Jean Bréfort <jean.brefort@normalesup.org>
* programs/calc/gchemcalc.cc: inhibit the Ask option which is not
implemented yet.
* programs/crystal/gcrystal.schemas.in: removed a localized string.
2008-09-14 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.9.92).
* libs/gcp/fragment.h: API documentation work.
* libs/gcp/text.h: ditto.
* programs/3d/application.cc: fixed color background from
command line.
* docs/help/3d/*: gchem3d help work.
2008-09-13 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/text/Makefile.am: don't forget the glade file in the
tarball.
2008-09-13 Jean Bréfort <jean.brefort@normalesup.org>
* Makefile.am: add back intltool-*.in to EXTRA_DIST (needed
by intltool 0.37.1).
2008-09-13 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: downgrade the intltool requirement to 0.37.1.
* docs/help/paint/*: update gchempaint help for 0.10.
2008-09-09 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/loaders/cdx/cdx.cc: fixed compilation on ppc and other
big-endian machines.
2008-09-07 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/text/Makefile.am: fix fontsel.glade installation.
2008-09-07 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/bond.h: API documentation work.
* libs/gcp/document.h: ditto.
* libs/gcp/fontsel.h: ditto.
* libs/gcp/fragment-residue.h: ditto.
* libs/gcp/fragment.h: ditto.
* libs/gcp/residue.h: ditto.
* libs/gcp/view.h: ditto.
* libs/gcu/chemistry.h: ditto.
* libs/gcu/gtkperiodic.h: ditto.
2008-09-06 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.9.91).
2008-09-06 Jean Bréfort <jean.brefort@normalesup.org>
* autogen.sh: reverted Daniels changes about docs links for now.
* configure.ac: ditto.
2008-09-06 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/residue.cc: no need to care about the delete button for
read-only residues.
* plugins/paint/residues/residues-dlg.cc: ditto.
* programs/calc/gchemcalc.cc: fixed typo.
* programs/spectra/window.cc: ditto.
* programs/table/gchemtable-data-allocator.cc: ditto.
2008-09-06 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: requires goffice-0.6.5 or later.
* docs/help/paint/C/fidures/*.png: new or updated screenshots.
* glade/crystal/docprop.glade: updated the user interface to be
more HIG compliant
* libs/gcp/about.cc: updated copyright.
* libs/gcp/document.h: API documentation work.
* libs/gcp/fragment-residue.cc: fix an issue with residues management.
* libs/gcp/fragment.cc: ditto.
* libs/gcp/residue.cc: ditto.
* libs/gcp/residue.h: ditto.
* libs/gcu/element.cc: add brazilian to known languages.
* plugins/paint/residues/plugin.cc: fix an issue with residues management.
* plugins/paint/residues/residues-dlg.cc: ditto.
* plugins/paint/residues/residues.glade: ditto.
* programs/calc/gchemcalc.cc: updated copyright.
* programs/crystal/Makefile.am: add docprop.*.
* programs/crystal/application.cc: add document properties support.
* programs/crystal/docprop.cc: ditto.
* programs/crystal/docprop.h: ditto.
* programs/crystal/document.cc: ditto.
* programs/crystal/document.h: ditto.
* programs/crystal/window.cc: updated copyright.
* programs/spectra/window.cc: updated copyright.
2008-09-01 Daniel Leidert <daniel.leidert@wgdd.de>
* docs/man/Makefile.am (gcu_man_src): Removed libgcu.3.xml.
(man_MANS): Removed libgcu.3. The filenames now automatically
consider stable/unstable releases. The target to create the manual
pages has been adusted accordingly.
* docs/man/gcu_entities.dtd.in: Define a suffix if built for an
unstable release. Use the API version as version number.
* docs/man/gchem3d.1.xml: Fixed IDs. Add suffix if necessary.
* docs/man/gchemcalc.1.xml: Likewise.
* docs/man/gchempaint.1.xml: Likewise.
* docs/man/gchemtable.1.xml: Likewise.
* docs/man/gcrystal.1.xml: Likewise.
* docs/man/gspectrum.1.xml: Likewise.
* docs/man/gchem3d-viewer-unstable.1: Renamed to docs/man/gchem3d.1
and updated.
* docs/man/gchemcalc-unstable.1: Likewise.
* docs/man/gchempaint-unstable.1: Likewise.
* docs/man/gchemtable-unstable.1: Likewise.
* docs/man/gcrystal-unstable.1: Likewise.
* docs/man/gspectrum-unstable.1: Likewise.
* docs/man/libgcu-unstable.3: Removed completely.
* docs/man/libgcu.3.xml: Ditto.
2008-09-01 Daniel Leidert <daniel.leidert@wgdd.de>
* docs/reference/Makefile.am: Fixed clean target. The directory is
under version control, so removing it completely is not a good idea.
2008-09-01 Daniel Leidert <daniel.leidert@wgdd.de>
* configure.ac: Fixed some quotation. Fixed fallback value for xulclient
to not be empty. Use AC_CONFIG_LINKS to create the versioned files in
docs/help (also cleans these files/links with distclean).
* autogen.sh: Removed gendocs vall. Done via configure (see above).
2008-08-27 Jean Bréfort <jean.brefort@normalesup.org>
* autogen.sh: use gendocs.
* gendocs: new script to update help files names.
* libs/gcp/bond.h: API documentation work.
* libs/gcp/document.h: ditto.
* docs/help/paint/C/figures: updated screenshots.
2008-08-26 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: remve G_DISABLE* to make things work with gtk+-2.14.
* libs/gcp/bond.h: API documentation work.
* libs/gcu/gtkchem3dviewer.cc: replaced deprecated gtk* calls.
* libs/gcu/gtkcrystalviewer.cc: ditto.
* libs/gcu/gtkperiodic.c: ditto.
2008-08-25 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/wikipedia/wikipediatool.cc: removed "unstable" word.
* programs/calc/gchemcalc.cc: ditto.
2008-08-24 Jean Bréfort <jean.brefort@normalesup.org>
* libs/canvas/gcp-canvas-bpath.h: replaced deprecated GTK_CHECK* macros.
* libs/canvas/gcp-canvas-group.h: ditto.
* libs/canvas/gcp-canvas-line.h: ditto.
* libs/canvas/gcp-canvas-pango.h: ditto.
* libs/canvas/gcp-canvas-polygon.h: ditto.
* libs/canvas/gcp-canvas-rect-ellipse.h: ditto.
* libs/canvas/gcp-canvas-shape.h: ditto.
* libs/canvas/gcp-canvas-text.h: ditto.
* libs/gcp/view.cc: ditto.
* libs/gcu/gtkchem3dviewer.h: ditto.
* libs/gcu/gtkcrystalviewer.h: ditto.
* libs/gcu/gtkperiodic.h: ditto.
* libs/gcu/gtkspectrumviewer.h: ditto.
2008-08-24 Jean Bréfort <jean.brefort@normalesup.org>
* programs/table/Makefile.am: always create the correct link.
2008-08-24 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: export missing constant.
* programs/3d/Makefile.am: restore missing '['.
* programs/calc/Makefile.am: ditto.
* programs/crystal/Makefile.am: ditto.
* programs/paint/Makefile.am: ditto.
* programs/spectra/Makefile.am: ditto.
* programs/table/Makefile.am: ditto.
2008-08-24 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.9.90).
2008-08-23 Jean Bréfort <jean.brefort@normalesup.org>
* autogen.sh: request /bin/bash.
* configure.ac: fix various build issues.
* docs/help/3d/Makefile.am: ditto.
* docs/help/calc/Makefile.am: ditto.
* docs/help/crystal/Makefile.am: ditto.
* docs/help/spectra/Makefile.am: ditto.
* docs/help/table/Makefile.am: ditto.
* programs/3d/Makefile.am: ditto.
* programs/calc/Makefile.am: ditto.
* programs/crystal/Makefile.am: ditto.
* programs/paint/Makefile.am: ditto.
* programs/spectra/Makefile.am: ditto.
* programs/table/Makefile.am: ditto.
2008-08-23 Jean Bréfort <jean.brefort@normalesup.org>
* tests/testgtkchem3dviewer.c: fix compilation without gnome-vfs.
2008-08-23 Jean Bréfort <jean.brefort@normalesup.org>
* docs/man/Makefile.am: removed the unstable keyword.
* docs/man/gcu_entities.dtd.in: ditto.
2008-08-23 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: use versioned help files.
* libs/gcp/application.cc: ditto.
* libs/gcu/application.cc: ditto.
* libs/gcu/spectrumdoc.cc: fixed a variable change bug.
* programs/3d/application.cc: use versioned help files.
* programs/calc/gchemcalc.cc: ditto.
* programs/crystal/application.cc: ditto.
* programs/spectra/application.cc: ditto.
* programs/table/gchemtable-curve.cc: ditto.
* programs/table/gchemtable-elt.cc: ditto.
* programs/table/gchemtable-main.cc: ditto.
2008-08-22 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: generate the missing Makefile.
2008-08-22 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/spectra/C/gspectrum.xml: add missing docs.
* docs/help/spectra/C/legal.xml: ditto.
* docs/help/spectra/Makefile.am: ditto.
* docs/help/spectra/gspectrum.omf.in: ditto.
2008-08-22 Jean Bréfort <jean.brefort@normalesup.org>
* autogen.sh: use versioned help files.
* docs/help/3d/Makefile.am: ditto.
* docs/help/3d/gchem3d-viewer-unstable.omf.in: ditto.
* docs/help/3d/gchem3d-viewer.omf.in: ditto.
* docs/help/Makefile.am: ditto.
* docs/help/calc/Makefile.am: ditto.
* docs/help/calc/gchemcalc-unstable.omf.in: ditto.
* docs/help/crystal/Makefile.am: ditto.
* docs/help/crystal/gcrystal-unstable.omf.in: ditto.
* docs/help/table/Makefile.am: ditto.
* docs/help/table/gchemtable-unstable.omf.in: ditto.
2008-08-21 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/tool.h: API documentation work.
* libs/gcp/view.h: ditto.
* libs/gcu/spectrumdoc.cc: more work on X variables switch and fix an
nmr integration issue.
* libs/gcu/spectrumdoc.h: ditto.
2008-08-20 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/fragment-residue.h: API documentation work.
* libs/gcp/tool.h: ditto.
* libs/gcu/spectrumdoc.cc: allow invertion of X axis and Y variable
selection (switch between absorbance and transmittance ).
* libs/gcu/spectrumdoc.h: ditto.
* libs/gcu/spectrumview.cc: ditto.
* libs/gcu/spectrumview.h: ditto.
2008-08-19 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.h: API documentation work.
* libs/gcp/bond.h: ditto.
* libs/gcp/docprop.h: ditto.
* libs/gcp/document.h: ditto.
* libs/gcp/electron.h: ditto.
* libs/gcp/fontsel.h: ditto.
* libs/gcp/fragment-atom.h: ditto.
* libs/gcp/fragment-residue.h: ditto.
* libs/gcp/mesomer.h: ditto.
* libs/gcp/mesomery-arrow.h: ditto.
* libs/gcp/mesomery.h: ditto.
* libs/gcp/molecule.h: ditto.
* libs/gcp/operation.h: ditto.
* libs/gcu/atom.cc: fixed Id setting.
* libs/gcu/molecule.cc: fixed a bug in Molecule::MoleculeFromFormula.
* libs/gcu/object.h: ifxed typo in API documentation.
* libs/gcu/spectrumdoc.cc: inhibit FID transform, but fixed ppm origin
using a Brücker specific field.
* libs/gcu/spectrumdoc.h: ditto.
* plugins/loaders/cdxml/cdxml.cc: import atoms groups.
2008-08-12 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.h: fixed doc typo.
* libs/gcp/bond.h: API documentation work.
* libs/gcp/docprop.h: ditto.
* libs/gcp/electron.h: ditto.
* libs/gcp/text-object.cc: implement GetProperty for raw text.
* libs/gcp/text-object.h: ditto.
* libs/gcu/atom.cc: fixed Atom::GetProperty.
* libs/gcu/object.cc: removed an empty line.
* plugins/loaders/cdx/cdx.cc: fixed a chemical text import issue.
* plugins/loaders/cdxml/cdxml.cc: import texts.
2008-08-11 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/gchemutils.cc: make things work with libgoffice >= 0.6.
* goffice/gogcpapp.cc: ditto.
* goffice/gogcpapp.h: ditto.
* goffice/gogcuapp.h: ditto.
* libs/gcp/application.h: API documentation work.
* libs/gcp/arrow.h: ditto.
* libs/gcp/atom.h: ditto.
* libs/gcp/document.h: ditto.
* libs/gcp/fragment.cc: fixed style on import from .cdx.
* libs/gcp/fragment.h: API documentation work.
* libs/gcp/tool.h: ditto.
* libs/gcp/widgetdata.h: ditto.
* libs/gcu/atom.cc: include config.h
* libs/gcu/bond.cc: ditto.
* libs/gcu/document.h: fixed API documentation.
* libs/gcu/gtkcrystalviewer.cc: include config.h
* libs/gcu/object.cc: implement GetProperty for GCU_PROP_ID.
* libs/gcu/object.h: fixed API documentation.
* libs/gcu/sphere.cc: include config.h
* libs/gcu/vector.cc: include config.h
* libs/gcu/window.cc: add Show and Destroy methods.
* libs/gcu/window.h: ditto.
* plugins/loaders/cdxml/cdxml.cc: some work on atoms groups.
* plugins/paint/residues/residues-dlg.cc: fixed for using the new
gcu::Window class.
* plugins/paint/residues/residues-dlg.h: ditto.
* plugins/paint/selection/plugin.cc: removed uused UI.
2008-08-07 Jean Bréfort <jean.brefort@normalesup.org>
* goffice/Makefile.am: start reimplementation of the gchempaint
goffice plugin.
* goffice/gchemutils-priv.h: ditto.
* goffice/gchemutils.cc: ditto.
* goffice/gogcpapp.cc: ditto.
* goffice/gogcpapp.h: ditto.
* goffice/gogcpwin.cc: ditto.
* goffice/gogcpwin.h: ditto.
* goffice/gogcuapp.cc: ditto.
* goffice/gogcuapp.h: ditto.
* goffice/plugin.xml.in: ditto.
* libs/gcp/application.h: more API documentation work.
* libs/gcp/target.cc: derives from gcu::Window.
* libs/gcp/target.h: ditto.
* libs/gcp/text-object.h: API documentation work.
* libs/gcp/text.h: ditto.
* libs/gcp/tools.h: ditto.
* libs/gcu/Makefile.am: add window.*.
* libs/gcu/application.h: fixed API documentation.
* libs/gcu/window.cc: new window base class.
* libs/gcu/window.h: ditto.
* plugins/paint/residues/residues-dlg.h: add a Show() method.
2008-08-04 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: use gio/gvfs instead of gnomevfs.
* libs/gcp/application.h: ditto.
* libs/gcp/document.cc: ditto.
* libs/gcp/stringdlg.cc: ditto.
* libs/gcp/stringdlg.h: ditto.
* libs/gcp/view.cc: ditto.
* libs/gcp/window.cc: ditto.
* libs/gcu/application.cc: ditto.
* libs/gcu/application.h: ditto.
* libs/gcu/filechooser.cc: ditto.
* libs/gcu/glview.cc: ditto.
* mozilla-plugin/chem-viewer.cc: ditto.
* plugins/paint/wikipedia/wikipediatool.cc: ditto.
* programs/3d/main.cc: ditto.
* programs/3d/window.cc: ditto.
* programs/calc/gchemcalc.cc: ditto.
* programs/crystal/application.cc: ditto.
* programs/crystal/document.cc: ditto.
* programs/crystal/main.cc: ditto.
* programs/crystal/window.cc: ditto.
* programs/paint/main.cc: ditto.
* programs/spectra/gspectrum.cc: ditto.
* programs/spectra/window.cc: ditto.
* programs/table/gchemtable-app.cc: ditto.
* programs/table/gchemtable-curve.cc: ditto.
* programs/table/gchemtable-data-allocator.cc: ditto.
2008-08-03 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: try to replace gnomevfs by gio/gvfs as much as possible.
* libs/gcp/Hposdlg.h: API documentation work.
* libs/gcp/widgetdata.h: ditto.
* libs/gcu/application.cc: try to replace gnomevfs by gio/gvfs as much
as possible.
* libs/gcu/chem3ddoc.cc: ditto.
* libs/gcu/crystalview.cc: ditto.
* libs/gcu/filechooser.cc: ditto.
* libs/gcu/glview.cc: ditto.
* libs/gcu/spectrumdoc.cc: ditto.
* programs/3d/application.cc: ditto.
* programs/3d/main.cc: ditto.
* programs/3d/window.cc: ditto.
* programs/calc/gchemcalc.cc: ditto.
* programs/spectra/Makefile.am: fixed typo.
* programs/table/gchemtable-app.cc: try to replace gnomevfs by gio/gvfs
as much as possible.
* programs/table/gchemtable-main.cc: ditto.
2008-08-02 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/document.cc: imports new resodues from gchempaint and chemdraw
(.cdx) files.
* libs/gcp/fragment-atom.cc: ditto.
* libs/gcp/fragment-residue.cc: ditto.
* libs/gcp/fragment.cc: ditto.
* libs/gcp/molecule.cc: ditto.
* libs/gcp/operation.h: API documentation work.
* libs/gcp/residue.cc: imports new residues from gchempaint and chemdraw
(.cdx) files.
* libs/gcp/residue.h: ditto.
* libs/gcp/view.h: API documentation work.
* libs/gcp/widgetdata.h: ditto.
* libs/gcp/window.h: ditto.
* libs/gcp/zoomdlg.h: ditto.
* libs/gcu/molecule.cc: imports new residues from gchempaint and chemdraw
(.cdx) files.
* libs/gcu/residue.cc: ditto.
* plugins/loaders/cdx/cdx.cc: ditto.
* plugins/paint/bonds/bondtool.cc: allow adding a bond starting from a
fragment.
* plugins/paint/residues/residues-dlg.cc: imports new residues from
gchempaint and chemdraw (.cdx) files.
2008-07-30 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: define a suffix to add to applications menu entries for
unstable versions.
* libs/gcp/application.h: minor documentation update.
* libs/gcp/document.h: fixed residues import.
* libs/gcp/residue.cc: ditto.
* libs/gcp/residue.h: ditto.
* libs/gcp/target.h: API documentation.
* libs/gcp/window.cc: removed a duplicate member.
* libs/gcp/window.h: API documentation.
* libs/gcp/zoomdlg.h: ditto.
* libs/gcu/molecule.cc: fixed a bug in the constructor.
* libs/gcu/residue.cc: fixed residues import.
* libs/gcu/residue.h: ditto.
* plugins/loaders/cdx/cdx.cc: ditto.
* plugins/paint/residues/plugin.cc: ditto.
* plugins/paint/residues/plugin.h: ditto.
* plugins/paint/residues/residues-dlg.cc: ditto.
* plugins/paint/residues/residues-dlg.h: ditto.
* programs/3d/gchem3d.desktop.in.in: adds the API version number to the
applications menu entry when unstable.
* programs/calc/gchemcalc.desktop.in.in:
* programs/crystal/gcrystal.desktop.in.in:
* programs/paint/gchempaint.desktop.in.in:
* programs/spectra/gspectrum.desktop.in.in:
* programs/table/gchemtable.desktop.in.in:
2008-07-29 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: a better definition of stable versions.
* libs/gcp/application.h: documentation update.
* libs/gcp/arrow.h: ditto.
* libs/gcp/atom.cc: prefer horizontal positions for H atoms.
* libs/gcp/atom.h: documentation update.
* libs/gcp/document.cc: some work on document specific residues.
* libs/gcp/document.h: ditto.
* libs/gcp/residue.cc: ditto.
* libs/gcp/residue.h: ditto.
* libs/gcu/application.h: fixed documentation.
* libs/gcu/document.cc: some work on document specific residues.
* libs/gcu/document.h: ditto.
* libs/gcu/molecule.cc: ditto.
* libs/gcu/residue.cc: ditto.
* libs/gcu/residue.h: ditto.
* plugins/loaders/cdx/cdx.cc: imoort unknown residues.
* plugins/loaders/cdx/plugin.xml.in: remove write support.
* plugins/loaders/cdxml/plugin.xml.in: ditto.
* programs/3d/Makefile.am: use LN_S.
* programs/calc/Makefile.am: ditto.
* programs/crystal/Makefile.am: ditto.
* programs/paint/Makefile.am: ditto.
* programs/spectra/Makefile.am: ditto.
* programs/spectra/gspectrum.desktop.in.in: removed "unstable".
* programs/table/Makefile.am: use LN_S.
2008-07-26 Jean Bréfort <jean.brefort@normalesup.org>
* glade/paint/H-pos.glade: allow hydrogens above and below atoms.
* libs/gcp/Hposdlg.cc: ditto.
* libs/gcp/about.h: documentation update.
* libs/gcp/application.h: ditto.
* libs/gcp/arrow.h: ditto.
* libs/gcp/atom.cc: allow hydrogens above and below atoms.
* libs/gcp/atom.h: ditto.
* libs/gcp/widgetdata.h: documentation update.
* libs/gcu/application.h: minor documentation update.
* libs/gcu/chemistry.h: ditto.
* libs/gcu/crystalatom.h: ditto.
* libs/gcu/element.h: ditto.
* libs/gcu/object.h: ditto.
2008-07-23 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: cleaned out all unstable stuff.
* libs/gcp/text.cc: serialize anchor.
* libs/gcp/window.cc: fix recent files list.
* libs/gcu/application.cc: use default GtkRecentManager.
* programs/3d/window.cc: fix recent files list.
* programs/crystal/window.cc: ditto.
* programs/spectra/window.cc: ditto.
2008-07-19 Jean Bréfort <jean.brefort@normalesup.org>
* libs/canvas/gcp-canvas-group.c: (gnome_canvas_group_ext_bounds),
(gnome_canvas_group_ext_class_init): enhance bounds evaluation.
* libs/gcp/atom.cc: start work on H atom position enhancement.
* libs/gcp/atom.h: ditto.
* libs/gcp/bond.cc: finished rewrite of double bnd redering.
* libs/gcp/fragment-atom.cc: minor updates.
* libs/gcp/fragment.cc: ditto.
* libs/gcp/text.cc: support markup property.
* libs/gcp/text.h: ditto.
* libs/gcp/view.cc: ensure that the size is valid.
* libs/gcp/widgetdata.cc: enhance bounds evaluation.
* libs/gcu/application.h: more API documentation work.
* libs/gcu/atom.h: ditto.
* libs/gcu/bond.h: ditto.
* libs/gcu/chain.h: ditto.
* libs/gcu/chem3ddoc.h: ditto.
* libs/gcu/cmd-context.h: ditto.
* libs/gcu/crystalatom.h: ditto.
* libs/gcu/crystalcleavage.h: ditto.
* libs/gcu/crystaldoc.h: ditto.
* libs/gcu/crystalline.h: ditto.
* libs/gcu/crystalview.h: ditto.
* libs/gcu/cycle.h: ditto.
* libs/gcu/cylinder.h: ditto.
* libs/gcu/dialog-owner.h: ditto.
* libs/gcu/dialog.h: ditto.
* libs/gcu/document.h: ditto.
* libs/gcu/element.h: ditto.
* libs/gcu/filechooser.h: ditto.
* libs/gcu/formula.h: ditto.
* libs/gcu/gldocument.h: ditto.
* libs/gcu/glview.h: ditto.
* libs/gcu/isotope.h: ditto.
* libs/gcu/loader.h: ditto.
* libs/gcu/matrix.h: ditto.
* libs/gcu/matrix2d.h: ditto.
* libs/gcu/molecule.h: ditto.
* libs/gcu/object.h: ditto.
* libs/gcu/objprops.h: ditto.
* libs/gcu/print-setup-dlg.h: ditto.
* libs/gcu/printable.h: ditto.
* libs/gcu/residue.h: ditto.
* libs/gcu/spectrumdoc.h: ditto.
* libs/gcu/spectrumview.h: ditto.
* libs/gcu/sphere.h: ditto.
* libs/gcu/value.h: ditto.
* libs/gcu/vector.h: ditto.
* plugins/loaders/cdx/cdx.cc: import text decorations.
* plugins/paint/atoms/chargetool.cc: minor update.
2008-07-15 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/bond.cc: completed (hopefully) the work on double bonds display.
* libs/gcu/element.h: more API documentation work.
* libs/gcu/glview.h: ditto.
* libs/gcu/isotope.h: ditto.
* libs/gcu/loader.cc: ditto.
* libs/gcu/loader.h: ditto.
* libs/gcu/macros.h: ditto.
2008-07-13 Jean Bréfort <jean.brefort@normalesup.org>
* docs/reference/Doxyfile.in: fixed include paths.
* libs/gcp/atom.cc: more work on double bonds display.
* libs/gcp/bond.cc: ditto.
* libs/gcu/bond.h: more API documentation work.
* libs/gcu/chain.h: ditto.
* libs/gcu/chem3ddoc.h: ditto.
* libs/gcu/cmd-context.h: ditto.
* libs/gcu/crystalline.h: ditto.
* libs/gcu/crystalview.h: ditto.
* libs/gcu/cycle.cc: ditto.
* libs/gcu/cycle.h: ditto.
* libs/gcu/dialog-owner.h: ditto.
* libs/gcu/document.h: ditto.
* libs/gcu/element.h: ditto.
* libs/gcu/formula.h: ditto.
2008-07-12 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.h: some API documentation work.
* libs/gcp/bond.cc: enhanced more double bonds display.
* libs/gcp/bond.h: some API documentation work.
* libs/gcu/application.h: ditto.
* libs/gcu/atom.h: ditto.
* libs/gcu/bond.h: ditto.
* libs/gcu/chain.cc: ditto.
* libs/gcu/chain.h: ditto.
* libs/gcu/cycle.cc: ditto.
* libs/gcu/cycle.h: ditto.
* libs/gcu/cylinder.h: ditto.
* libs/gcu/object.h: ditto.
2008-07-11 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.h: some API documentation work.
* libs/gcp/bond.cc: enhanced some double bonds display.
* libs/gcu/element.h: some API documentation work.
* libs/gcu/formula.h: ditto.
* libs/gcu/sphere.h: ditto.
* libs/gcu/vector.h: ditto.
2008-07-08 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/view.cc: reimplement atom change using keyboard which was
broken since the removal of the background rectangle.
2008-07-07 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: fixed a couple of file opening issues.
* libs/gcp/fragment-atom.cc: set ShowSymbol to true so that carbon atoms
are correctly taken into account.
2008-07-05 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/fragment.cc: Use gcu::Formula to invert the formula when needed.
* libs/gcu/formula.cc: elements can now export text instead of markup.
* libs/gcu/formula.h: ditto.
2008-07-03 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/loaders/cdx/cdx.cc: fixed generic group loading.
2008-06-22 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.9.5).
2008-06-22 Jean Bréfort <jean.brefort@normalesup.org>
* Makefile.am: use intltoo >= 0.40.0.
* configure.ac: ditto.
2008-06-22 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/fragment-atom.cc: fixed bounds evaluation.
* libs/gcp/window.cc: correctly exit when requested.
* plugins/loaders/cdx/cdx.cc: fix various new issues.
* programs/table/gchemtable-curve.cc: clear the guru when done.
* programs/table/gchemtable-curve.h: ditto.
2008-06-21 Jean Bréfort <jean.brefort@normalesup.org>
* libs/canvas/gcp-canvas-group.c: fixed parent class.
* libs/gcp/atom.cc: fix canvas item bounds.
* libs/gcp/fragment-residue.cc: fixed a load time crasher.
* libs/gcp/fragment.cc: fix canvas item bounds.
* libs/gcu/molecule.cc: enhance cdx file loading.
* plugins/loaders/cdx/cdx.cc: ditto.
2008-06-15 Jean Bréfort <jean.brefort@normalesup.org>
* glade/table/curve.glade: set a default title.
* libs/gcu/application.cc: clear all dialogs before exiting to avoid
a bad goffice shutdown.
* libs/gcu/dialog-owner.cc: add ClearDialogs method.
* libs/gcu/dialog-owner.h: ditto.
* libs/gcu/dialog.cc: always correctly set the owner.
* programs/table/gchemtable-app.cc: fix shutdown.
* programs/table/gchemtable-curve.cc: ditto.
* programs/table/gchemtable-curve.h: ditto.
* programs/table/gchemtable-data-allocator.cc: use a GtkEntry for scalar
data.
* programs/table/gchemtable-main.cc: fix shutdown.
2008-06-08 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: do not draw a white rectangle under the atom anymore.
* libs/gcp/atom.h: ditto.
* libs/gcp/fragment-atom.cc: ditto.
* libs/gcp/fragment-atom.h: ditto.
* libs/gcp/fragment.cc: ditto.
* libs/gcp/fragment-residue.cc: fix a crasher.
* libs/gcu/application.cc: add missing spaces.
* libs/gcu/element.cc: abort when the database can't be loaded.
2008-06-07 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/spectrumview.cc: fixed number of decimals in X-axis limits.
2008-05-25 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/spectrumdoc.cc: fixed integration.
2008-05-23 Jean Bréfort <jean.brefort@normalesup.org>
* programs/table/gchemtable-data-allocator.cc: data can now be changed.
* programs/table/gchemtable-main.cc: allow linear regressions.
2008-05-22 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/element.h: removed obsolete prototype.
* programs/table/gchemtable-app.cc: add a "New chart" menu item.
* programs/table/gchemtable-app.h: ditto.
* programs/table/gchemtable-curve.cc: ditto.
* programs/table/gchemtable-data-allocator.cc: use vector type data list.
* programs/table/gchemtable-data.cc: build vector type data list.
* programs/table/gchemtable-data.h: ditto.
* programs/table/gchemtable-main.cc: only allow scatter plots (does not
really work because of a goffice bug).
2008-05-16 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: don't add hydrogens to metals.
* libs/gcu/element.cc: add Element::IsMetallic.
* libs/gcu/element.h: ditto.
2008-05-15 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: enhanced goffice detection.
* glade/crystal/atoms.glade: add new radii related controls
* libs/gcu/element.cc: fix a crash.
* programs/crystal/atomsdlg.cc: enhance radii managing.
* programs/crystal/atomsdlg.h: ditto.
2008-05-13 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/crystaldoc.cc: use VdW radii with an effective ratio
of 40% when loading a cif file.
2008-05-10 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: we need to generate the correct desktop files
using the API version in the executable name.
* programs/3d/Makefile.am: ditto.
* programs/3d/gchem3d.desktop.in: ditto.
* programs/3d/gchem3d.desktop.in.in: ditto.
* programs/3d/window.cc: ditto.
* programs/calc/Makefile.am: ditto.
* programs/calc/gchemcalc.desktop.in: ditto.
* programs/calc/gchemcalc.desktop.in.in: ditto.
* programs/crystal/Makefile.am: ditto.
* programs/crystal/gcrystal.desktop.in: ditto.
* programs/crystal/gcrystal.desktop.in.in: ditto.
* programs/crystal/x-gcrystal.desktop.in: ditto.
* programs/crystal/x-gcrystal.desktop.in.in: ditto.
* programs/paint/Makefile.am: ditto.
* programs/paint/gchempaint.desktop.in: ditto.
* programs/paint/gchempaint.desktop.in.in: ditto.
* programs/paint/x-gchempaint.desktop.in: ditto.
* programs/paint/x-gchempaint.desktop.in.in: ditto.
* programs/spectra/Makefile.am: ditto.
* programs/spectra/gspectrum.desktop.in: ditto.
* programs/spectra/gspectrum.desktop.in.in: ditto.
* programs/table/Makefile.am: ditto.
* programs/table/gchemtable.desktop.in: ditto.
* programs/table/gchemtable.desktop.in.in: ditto.
2008-05-09 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/theme.cc: fixed libgoffice initialization.
* libs/gcu/application.cc: ditto.
* mozilla-plugin/chem-viewer.cc: ditto.
* programs/calc/gchemcalc.desktop.in: add version to executable.
* programs/crystal/gcrystal.desktop.in: ditto.
* programs/paint/gchempaint.desktop.in: ditto.
* programs/spectra/gspectrum.desktop.in: ditto.
* programs/table/gchemtable.desktop.in: ditto.
2008-05-07 Jean Bréfort <jean.brefort@normalesup.org>
* database/radii.xml.in: add data for all elements, even if no
radius is known, and remove van der Waals and covalent radii.
* libs/gcu/element.cc: use van der Waals and covalent radii from BODR.
* libs/gcu/element.h: enhace GetProperty like methods..
* libs/gcu/value.h: add a missing const keyword.
2008-05-01 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: no more white rectangle behind atoms.
* libs/gcp/atom.h: ditto.
* libs/gcp/bond.cc: ditto.
* libs/gcp/fragment-residue.cc: fixed signature of GetSymbol.
* libs/gcp/fragment-residue.h: ditto.
* libs/gcu/residue.cc: do not reload a molecule.
2008-04-30 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/formula.cc: do not crash when first element in the raw
formula is artificial.
2008-04-30 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/formula.cc: more work on ambiguous symbols.
* libs/gcu/formula.h: ditto.
* libs/gcu/molecule.cc: ditto.
2008-04-28 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/formula.cc: more work on ambiguous symbols.
* libs/gcu/formula.h: ditto.
* libs/gcu/molecule.cc: ditto.
* libs/gcu/object.cc: ditto.
* libs/gcu/residue.cc: ditto.
* libs/gcu/residue.h: ditto.
* programs/calc/gchemcalc.cc: ditto.
2008-04-25 Jean Bréfort <jean.brefort@normalesup.org>
* all: changed build system to make branching easier.
2008-04-23 Jordan Mantha <mantha@ubuntu.com>
* libs/gcp/fragment-residue.cc: add cstring include for g++ 4.3
* libs/gcp/reaction-prop.cc: ditto
* libs/gcu/loader.cc: ditto
* libs/gcu/printable.cc: ditto
* plugins/loaders/cdx/cdx.cc: ditto
* plugins/loaders/cdxml/cdxml.cc: ditto
* plugins/paint/arrows/retrosynthesis.cc: ditto
* plugins/paint/residues/pseudo-atom.cc: ditto
* plugins/paint/selection/group.cc: ditto
* plugins/paint/text/texttool.cc: ditto
2008-04-23 Jean Bréfort <jean.brefort@normalesup.org>
* glade/gchemcalc.glade: replaced buttons by menu items.
* libs/gcu/formula.cc: start working on the various modes.
* programs/calc/gchemcalc.cc: update user interface and add print
preview and image export for the isotopic pattern chart.
2008-04-22 Jean Bréfort <jean.brefort@normalesup.org>
* database/elements.xml.in: add a default valence (might be somewhat
arbitrary in some cases), removed not anymore used atomic weights.
* database/residues.xml.in: add the M generic symbol.
* libs/gcp/application.cc: add ps and pdf to image export.
* libs/gcp/view.cc: reimplemented eps export and add ps and pdf.
* libs/gcu/element.cc: load default valence from elements.xml.
2008-04-21 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/view.cc: fixed an update issue which blocked showing
2D structures in the mozilla plugin.
* libs/gcp/widgetdata.cc: enhanced GetObjectBounds.
* libs/gcu/gtkspectrumviewer.cc: really implemented.
* mozilla-plugin/chem-viewer.cc: finished 2D structures support, and
added jcamp-dx support.
* mozilla-plugin/moz-plugin.c: add jcamp-dx support:
2008-04-20 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/glview.cc: added GLView::RenderToCairo.
* libs/gcu/glview.h: ditto.
* programs/3d/application.cc: add pdf, ps and eps to image export.
* programs/crystal/application.cc: ditto.
2008-04-19 Jean Bréfort <jean.brefort@normalesup.org>
* acinclude.m4: add dolt m4 code.
* configure.ac: use dolt when possible, and request cairo 1.6 or later.
* libs/gcp/settings.h: add eps format to clipboard.
* libs/gcp/view.cc: cleaned copy code.
* libs/gcp/widgetdata.cc: ditto.
* programs/spectra/application.cc: export eps images.
2008-04-17 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: don't try to use a non finite angle.
* libs/gcp/fragment-atom.cc: call Fragment:Update when needed.
* libs/gcp/fragment.cc: new Ananlyze and Update methods needed for
cdx(ml) import.
* libs/gcp/fragment.h: ditto.
* libs/gcu/molecule.cc: fix a crasher in MoleculeFromFormula.
* plugins/loaders/cdx/cdx.cc: enhanced atoms groups import.
2008-04-15 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/bond.cc: moved ReplaceAtom to gcu.
* libs/gcp/bond.h: ditto.
* libs/gcu/bond.cc: ditto.
* libs/gcu/bond.h: ditto.
* libs/gcu/molecule.cc: make MoleculeFromFormula work in some simple
cases, and removed useless Match method.
* libs/gcu/molecule.h: ditto.
* plugins/loaders/cdx/cdx.cc: really compares the string attached to
an atom group and the corresponding molecule.
2008-04-14 Jean Bréfort <jean.brefort@normalesup.org>
* all files: made some methods const.
* libs/gcu/molecule.cc: add a static MoleculeFromFormula method.
* libs/gcu/molecule.h: ditto.
* plugins/loaders/cdx/cdx.cc: call Molecule::MoleculeFromFormula
when appropriate.
2008-04-10 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: needs libgsf >= 1.14.9 for gio support.
* libs/gcu/application.cc: use libgsf gio support instead of
gnomevfs.
2008-04-09 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: activates image export after loading.
* libs/gcp/fragment.cc: add atom in the objects tree after setting
its ID if necessary.
* libs/gcu/application.cc: in Application::Load should return false
on error.
* libs/gcu/formula.cc: make some classes public.
* libs/gcu/formula.h: ditto.
* libs/gcu/molecule.cc: add a Match method to check if a semi-
developped formula is compatible with the know structure (not
yet fully implemented.
* libs/gcu/molecule.h: ditto.
* plugins/loaders/cdx/cdx.cc: more work on residue import and ensure
cycles are updated after loading.
* plugins/loaders/cdxml/cdxml.cc: ensure cycles are updated after
loading.
2008-04-05 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/spectrumdoc.cc: add integration support for nmr spectra.
* libs/gcu/spectrumdoc.h: ditto.
* libs/gcu/spectrumview.cc: ditto.
* libs/gcu/spectrumview.h: ditto.
2008-03-31 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/atom.cc: implement a rough molecule comparison method.
* libs/gcp/atom.h: ditto.
* libs/gcp/fragment-atom.cc: ditto.
* libs/gcp/fragment-atom.h: ditto.
* libs/gcp/fragment.cc: implement Fragment::SetProperty.
* libs/gcp/fragment.h: ditto.
* libs/gcp/molecule.cc: implement a rough molecule comparison method.
* libs/gcp/molecule.h: ditto.
* libs/gcu/atom.cc: ditto.
* libs/gcu/atom.h: ditto.
* libs/gcu/molecule.cc: ditto.
* libs/gcu/molecule.h: ditto.
* libs/gcu/objprops.h: add fragments related properties.
* plugins/loaders/cdx/cdx.cc: import nicks (only standard ones atm).
2008-03-30 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/spectrumdoc.cc: fixed a crash and always get a correct range
when changing units.
2008-03-30 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/spectrumdoc.cc: allow choosing x units in nmr between
Hz and ppm.
* libs/gcu/spectrumdoc.h: ditto.
* libs/gcu/spectrumview.cc: ditto.
* libs/gcu/spectrumview.h: ditto.
2008-03-30 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/spectrumdoc.cc: add widgets to limit visible range.
* libs/gcu/spectrumview.cc: ditto.
* libs/gcu/spectrumview.h: ditto.
* programs/spectra/window.cc: ditto.
2008-03-29 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/spectrumdoc.cc: load nmr spectra using jcamp-dx 5.x NTUPPLES.
* libs/gcu/spectrumdoc.h: ditto.
* libs/gcu/spectrumview.cc: add ShowAxis method.
* libs/gcu/spectrumview.h: ditto.
2008-03-27 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/molecule.cc: moved operator== to base class.
* libs/gcp/molecule.h: ditto.
* libs/gcp/residue.cc: add a virtual operator== (Molecule).
* libs/gcp/residue.h: ditto.
* libs/gcu/molecule.cc: moved operator== from gcp::Molecule, and enhance
it a bit.
* libs/gcu/molecule.h: ditto.
* libs/gcu/residue.h: add a virtual operator== (Molecule).
* plugins/loaders/cdx/cdx.cc: test the molecule associated with a nickname.
2008-03-25 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/spectrumdoc.cc: load VAR_NAME field and associated.
* libs/gcu/spectrumdoc.h: ditto.
2008-03-24 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: ensure loaded objects from cdx(ml) are
visible, and unconned from theme in destructor.
* libs/gcp/document.cc: enable setting a NULL theme (to exit
properly).
* libs/gcp/theme.cc: disconnect all clients before destroying a theme.
* libs/gcu/spectrumdoc.cc: supports peak tables in general and
mass spectra in particular.
* libs/gcu/spectrumdoc.h: ditto.
2008-03-23 Jean Bréfort <jean.brefort@normalesup.org>
* database/elements.xml.in: accept up to 8 bonds for osmium.
* libs/gcp/application.cc: correctly detects the mime type, even if the
file doesn't exist. [#22686]; accept file names with spaces for files
opened using OpenBabel. [#22695]
* programs/paint/main.cc: no more need to force detection of mime
type from there.
2008-03-22 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/spectrumdoc.cc: use go-complex instead of complex.
* libs/gcu/spectrumdoc.h: ditto.
2008-03-19 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.9.4).
2008-03-18 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: test for gio presence.
* libs/gcp/Makefile.am: add two new source files.
* libs/gcp/application.cc: add headers missing after document.h cleaning.
* libs/gcp/atom.cc: dont try to set an atomic number less that 1.
* libs/gcp/document.cc: save used residues with document.
* libs/gcp/document.h: ditto and replaced unneeded headers by class
forward declarations.
* libs/gcp/fragment-atom.h: made some cleaning and add a way to retrieve
the parent fragment.
* libs/gcp/fragment-residue.cc: initial support for nick names and
generic symbols.
* libs/gcp/fragment-residue.h: ditto.
* libs/gcp/fragment.cc: ditto.
* libs/gcp/mesomery.cc: add headers missing after document.h cleaning.
* libs/gcp/molecule.cc: remocve known cycles before a new search and always
allow to copy to calc.
* libs/gcp/reaction.cc: add headers missing after document.h cleaning.
* libs/gcp/residue.cc: add a document instance to each residue to
store the equivalent molecule.
* libs/gcp/residue.h: ditto.
* libs/gcp/stringdlg.cc: add headers missing after document.h cleaning.
* libs/gcp/view.cc: ditto.
* libs/gcu/atom.h: make Atom::GetSymbol virtual.
* libs/gcu/chem3ddoc.cc: use gio for loading.
* libs/gcu/formula.h: add an enum for ambiguous symbols management mode.
* libs/gcu/macros.h: add new properties macros more suitable for pointers.
* libs/gcu/molecule.cc: avoid duplicate bonds.
* libs/gcu/residue.cc: load all names not only the local one.
* libs/gcu/residue.h: ditto.
* libs/gcu/spectrumdoc.cc: add a complex array for nmr ntuples loading.
* libs/gcu/spectrumdoc.h: ditto.
* plugins/paint/atoms/elementtool.cc: add headers missing after
document.h cleaning.
* plugins/paint/bonds/bondtool.cc: ditto.
* plugins/paint/bonds/chaintool.cc: ditto.
* plugins/paint/cycles/cycletool.cc: ditto.
* plugins/paint/residues/residues-dlg.cc: ditto.
* plugins/paint/selection/erasertool.cc: ditto.
* plugins/paint/templates/templatetool.cc: ditto.
* plugins/paint/text/fragmenttool.cc: ditto.
* plugins/paint/text/texttool.cc: ditto.
* programs/crystal/main.cc: remove commented out instruction.
* programs/paint/main.cc: do not call libgnomeui.
2008-03-11 Jean Bréfort <jean.brefort@normalesup.org>
* programs/calc/gchemcalc.cc: prints the isotopic pattern.
2008-03-11 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: remove GnomePrint dependency.
* glade/gchemcalc.glade: add buttons for printing.
* libs/canvas/Makefile.am: remove GnomePrint dependency.
* libs/canvas/gcp-canvas-group.c: ditto.
* libs/canvas/gcp-canvas-line.c: ditto.
* libs/canvas/gcp-canvas-pango.c: ditto.
* libs/canvas/gcp-canvas-shape.c: ditto.
* libs/canvas/gnome-print-pango.c: removed obsolete.
* libs/canvas/gnome-print-pango.h: ditto.
* libs/canvas/gprintable.c: remove GnomePrint dependency.
* libs/canvas/gprintable.h: ditto.
* libs/gcp/document.cc: ditto.
* libs/gcp/document.h: ditto.
* libs/gcp/reaction-step.h: add missing header.
* libs/gcp/view.cc: remove GnomePrint dependency.
* libs/gcp/view.h: ditto.
* libs/gcp/window.cc: ditto.
* libs/gcp/window.h: ditto.
* libs/gcu/document.h: ditto.
* libs/gcu/element.cc: ditto.
* libs/gcu/glview.cc: ditto.
* libs/gcu/glview.h: ditto.
* libs/gcu/object.cc: ditto.
* libs/gcu/object.h: ditto.
* libs/gcu/print-setup-dlg.cc: ditto.
* libs/gcu/printable.cc: ditto.
* libs/gcu/printable.h: ditto.
* libs/gcu/spectrumdoc.cc: ditto.
* libs/gcu/spectrumdoc.h: ditto.
* libs/gcu/spectrumview.cc: ditto.
* libs/gcu/spectrumview.h: ditto.
* programs/3d/window.cc: ditto.
* programs/crystal/application.cc: ditto.
* programs/crystal/document.cc: ditto.
* programs/crystal/view.h: ditto.
* programs/crystal/window.cc: ditto.
* programs/spectra/gspectrum.cc: ditto.
* programs/spectra/window.cc: ditto.
* programs/spectra/window.h: ditto.
* programs/table/gchemtable-curve.cc: ditto.
* programs/table/gchemtable-curve.h: ditto.
2008-03-05 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/selection/selectiontool.cc: always update the state
of the merge button after using it. [#22485]
2008-03-04 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/macros.h: add GCU_UPDATE_STRING_KEY.
* libs/gcu/printable.cc: use the new macro for strings.
2008-03-04 Jean Bréfort <jean.brefort@normalesup.org>
* glade/print-setup.glade: group radio buttons.
* libs/gcu/glview.cc: make GLView derive from Printable and remove
GnomePrint dependencies..
* libs/gcu/glview.h: ditto.
* libs/gcu/gtkchem3dviewer.cc: replace gtk_chem3d_viewer_print by
gtk_chem3d_viewer_new_pixbuf.
* libs/gcu/gtkchem3dviewer.h: ditto.
* libs/gcu/gtkcrystalviewer.cc: add gtk_crystal_viewer_new_pixbuf.
* libs/gcu/gtkcrystalviewer.h: ditto.
* libs/gcu/print-setup-dlg.cc: manages scled printing.
* libs/gcu/print-setup-dlg.h: ditto.
* libs/gcu/printable.cc: ditto.
* libs/gcu/printable.h:ditto.
* programs/3d/window.cc: moved GtkPrint support to GLView.
* programs/3d/window.h: ditto.
* programs/crystal/application.cc: prints using GtkPrint.
* programs/crystal/application.h: ditto.
* programs/crystal/document.cc: ditto.
* programs/crystal/view.cc: ditto.
* programs/crystal/view.h: ditto.
* programs/crystal/window.cc: ditto.
2008-03-01 Jean Bréfort <jean.brefort@normalesup.org>
* glade/print-setup.glade: fixed a duplicated widget name.
* libs/gcp/application.cc: fixed gconf key path.
* libs/gcp/document.cc: removed printf debug stuff.
* libs/gcp/theme.cc: initialize goffice.
* libs/gcu/print-setup-dlg.cc: start work on scaled printing.
* libs/gcu/print-setup-dlg.h: ditto.
* libs/gcu/printable.cc: ditto.
* libs/gcu/printable.h: ditto.
* plugins/loaders/cdx/cdx.cc: some work on fragments and nicknames.
* plugins/paint/arrows/arrowtool.cc: use go_conf when available.
* plugins/paint/arrows/plugin.cc: ditto.
* programs/3d/window.cc: fixed printing origin.
2008-02-26 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/glview.cc: fixed another gconf issue.
* libs/gcu/print-setup-dlg.cc: fixed a signal argument order.
* libs/gcu/printable.cc: initialize centered relatd variables.
* programs/calc/gchemcalc.cc: initialize goffice plugins after goffice.
* programs/table/gchemtable-main.cc: ditto.
2008-02-25 Jean Bréfort <jean.brefort@normalesup.org>
* glade/print-setup.glade: minor update.
* libs/gcp/application.cc: add a CreateNewDocument. virtual method.
* libs/gcp/application.h: ditto.
* libs/gcp/document.cc: knows new properties.
* libs/gcu/application.cc: add a CreateNewDocument. virtual method.
* libs/gcu/application.h: ditto.
* libs/gcu/document.h: add a virtual Save method.
* libs/gcu/glview.cc: fixed some GConf issues.
* libs/gcu/macros.h: ditto.
* libs/gcu/objprops.h: add new douments properties.
* libs/gcu/print-setup-dlg.cc: add horizontal and vertical centering.
* libs/gcu/print-setup-dlg.h: ditto.
* libs/gcu/printable.h: ditto.
* programs/3d/window.cc: use natural size when printing and support
centered printing.
2008-02-21 Jean Bréfort <jean.brefort@normalesup.org>
* glade/print-setup.glade: added buttons to save/reload defaults.
* libs/gcu/print-setup-dlg.cc: manage margins.
* libs/gcu/print-setup-dlg.h: ditto.
* libs/gcu/printable.cc: ditto.
* libs/gcu/printable.h: ditto.
2008-02-19 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: check if goffice has go_conf_*.
* gchemutils.schemas.in: minor enhancements.
* glade/print-setup.glade: ditto.
* libs/gcp/application.cc: use go_conf* if available.
* libs/gcp/application.h: ditto.
* libs/gcp/molecule.cc: started work on Molecule::operator==.
* libs/gcp/molecule.h: ditto.
* libs/gcp/preferences.cc: use go_conf* if available.
* libs/gcp/settings.h: ditto.
* libs/gcp/theme.cc: ditto.
* libs/gcp/theme.h: ditto.
* libs/gcu/application.cc: ditto.
* libs/gcu/application.h: ditto.
* libs/gcu/dialog.cc: ditto.
* libs/gcu/glview.cc: ditto.
* libs/gcu/glview.h: ditto.
* libs/gcu/macros.h: ditto.
* libs/gcu/print-setup-dlg.cc: support paper and orientation changes.
* libs/gcu/print-setup-dlg.h: ditto.
* libs/gcu/printable.cc: use go_conf* if available.
* libs/gcu/printable.h: ditto.
* plugins/paint/arrows/arrowtool.cc: ditto.
* plugins/paint/arrows/gchempaint-arrows.schemas.in: fixed paths.
* programs/3d/main.cc: use go_conf* if available.
* programs/3d/window.cc: ditto.
* programs/3d/window.h: ditto.
* programs/calc/gchemcalc.cc: ditto.
* programs/crystal/globals.h: ditto.
* programs/crystal/main.cc: ditto.
* programs/crystal/prefs.cc: ditto.
* programs/paint/gchempaint.schemas.in: fixed paths.
* programs/spectra/gspectrum.cc: use go_conf* if available.
* programs/table/gchemtable-curve.cc: ditto.
* programs/table/gchemtable-curve.h: ditto.
* programs/table/gchemtable-main.cc: ditto.
2008-02-16 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: can now use future version (up to 0.8) of goffice.
* glade/Makefile.am: add new dialog.
* glade/print-setup.glade: new dialog imported from gnumeric, and adapted.
* libs/gcp/text-object.h: add alignment related members, not used atm.
* libs/gcp/text.h: ditto.
* libs/gcu/Makefile.am: new files.
* libs/gcu/glview.cc: fix an issue in glView::BuildPixbuf.
* libs/gcu/glview.h: glView::BuildPixbuf is now public.
* libs/gcu/objprops.h: add text alignment.
* libs/gcu/print-setup-dlg.cc: new dialog.
* libs/gcu/print-setup-dlg.h: ditto.
* libs/gcu/printable.cc: new base class aimed at GtkPrint support.
* libs/gcu/printable.h: ditto.
* programs/3d/window.cc: derives from gcu::Printable.
* programs/3d/window.h: ditto.
* programs/table/gchemtable-curve.cc: ditto.
* programs/table/gchemtable-curve.h: ditto.
2008-02-12 Jean Bréfort <jean.brefort@normalesup.org>
* Makefile.am: add new schemas.
* gchemutils.schemas.in: ditto.
* libs/gcu/glview.cc: add a key to avoid even trying to use the
off-screen rendering code, and clean everything on exit.
* libs/gcu/glview.h: ditto.
2008-02-03 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/reaction-arrow.cc: fix loading of double reaction
arrows. [#22223]
2008-02-02 Jean Bréfort <jean.brefort@normalesup.org>
* glade/gchemcalc.glade: increase width to accomodate more
precise masses.
* libs/gcp/atom.cc: don't crash in Update if the atiem does not exist.
* libs/gcp/bond.cc: ditto.
* libs/gcp/electron.cc: ditto.
* libs/gcp/theme.cc: don't init g_type in destructor.
* libs/gcu/chemistry.cc: get better strings from values.
* libs/gcu/element.cc: use gcu::Value instead of double for masses, and
import atomic molar masses from BODR.
* libs/gcu/element.h: ditto.
* libs/gcu/formula.cc: ditto.
* libs/gcu/formula.h: ditto.
* libs/gcu/isotope.cc: ditto.
* libs/gcu/isotope.h: ditto.
* libs/gcu/value.cc: add some arithmetic.
* libs/gcu/value.h: ditto.
* plugins/paint/arrows/retrosynthesisarrow.cc: don't crash in Update
if the atiem does not exist.
* programs/calc/gchemcalc.cc: load BODR.
* programs/table/gchemtable-elt.cc: display more precise masses.
2008-01-27 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/filechooser.cc: fix print and image export when off-screen
rendering does not work, previous fix was not enough. [#21946]
* gcu/glview.cc: ditto.
2008-01-18 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/chem3ddoc.cc: show multiple bonds as multiple cylinders
in ball and stick mode.
* libs/gcu/crystaldoc.cc: really hide hidden objects.
2008-01-09 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/arrow.cc: implement SetProperty.
* libs/gcp/arrow.h: ditto.
* libs/gcp/mesomery-arrow.cc: set an explicit id prefix.
* libs/gcp/reaction-arrow.cc: implement SetProperty.
* libs/gcp/reaction-arrow.h: ditto.
* libs/gcu/atom.cc: add charge property.
* libs/gcu/atom.h: ditto.
* libs/gcu/objprops.h: ditto.
* plugins/loaders/cdx/cdx.cc:import atom charge and arrows.
* plugins/loaders/cdxml/cdxml.cc: ditto.
2008-01-06 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/loaders/cdx/cdx.cc: fixed triple bonds import.
* plugins/loaders/cdxml/cdxml.cc: ditto.
2008-01-03 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/loaders/cdx/cdx.cc: load groups.
* plugins/loaders/cdxml/cdxml.cc: ditto.
* plugins/paint/selection/group.cc: implement gcpGroup::OnLoaded
* plugins/paint/selection/group.h: ditto.
2008-01-02 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/loaders/cdx/cdx.cc: load colors table.
* plugins/loaders/cdxml/cdxml.cc: ditto.
2008-01-01 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/Makefile.am: moved the chemical part of molecules from gcp
to gcu.
* libs/gcp/atom.cc: ditto.
* libs/gcp/atom.h: ditto.
* libs/gcp/bond.cc: ditto.
* libs/gcp/bond.h: ditto.
* libs/gcp/chain.cc: ditto.
* libs/gcp/chain.h: ditto.
* libs/gcp/cycle.cc: ditto.
* libs/gcp/cycle.h: ditto.
* libs/gcp/document.h: ditto.
* libs/gcp/molecule.cc: ditto.
* libs/gcp/molecule.h: ditto.
* libs/gcu/Makefile.am: ditto.
* libs/gcu/atom.cc: ditto.
* libs/gcu/atom.h: ditto.
* libs/gcu/bond.cc: ditto.
* libs/gcu/bond.h: ditto.
* libs/gcu/chain.cc: ditto.
* libs/gcu/chain.h: ditto.
* libs/gcu/cycle.cc: ditto.
* libs/gcu/cycle.h: ditto.
* libs/gcu/document.cc: ditto.
* libs/gcu/document.h: ditto.
* libs/gcu/molecule.cc: ditto.
* libs/gcu/molecule.h: ditto.
* libs/gcu/object.cc: ditto.
* libs/gcu/object.h: ditto.
* plugins/loaders/cdxml/cdxml.cc: started export.
* plugins/paint/cycles/cycletool.cc: use gcu::Chain and gcu::Cycle.
* plugins/paint/cycles/cycletool.h: ditto.
2007-12-31 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/bond.cc: imlementent SetProperty for bond type.
* libs/gcp/bond.h: ditto.
* plugins/loaders/cdx/cdx.cc: load font table and bond type, save header.
* plugins/loaders/cdx/plugin.xml.in: add write flag.
* plugins/loaders/cdxml/cdxml.cc: load font table and bond type.
* plugins/loaders/cdxml/plugin.xml.in: add write flag.
2007-12-30 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/bond.cc: fix a few possible crashers.
* libs/gcp/text.cc: implemented the SetProperty method.
* libs/gcp/text.h: ditto.
* libs/gcu/objprops.h: add text property.
* plugins/loaders/cdx/cdx.cc: load simple text and fix bond import.
* plugins/paint/selection/selectiontool.cc: fix a crasher.
2007-12-29 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/document.cc: fix saving with a new name of read only files.
* libs/gcu/application.cc: unref the GSF stream.
* libs/gcu/bond.cc: don't crash when saving invalid bonds.
* libs/gcu/objtypes.h: new file with enumeration of accepted properties.
* plugins/loaders/cdx/cdx.cc: started implementing reading.
* plugins/loaders/cdxml/cdxml.cc: started work on bond types.
2007-12-29 Jean Bréfort <jean.brefort@normalesup.org>
* all files: implemented new loadin api and make it work minimally
with cdxml files.
2007-12-21 Daniel Leidert <daniel.leidert@wgdd.de>
* plugins/loaders/cdx/Makefile.am: xml_DATA is created my make, so
remove it in the clean target, not in distclean.
(gcu_loader_cdxmldir): Use the $(VERSION) variable.
* plugins/loaders/cdxml/Makefile.am: Likewise.
2007-12-21 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.9.3).
* plugins/loaders/Makefile.am: add new cds directory.
* plugins/loaders/cdx/Makefile.am: new plugin.
* plugins/loaders/cdx/cdx.cc: ditto.
* plugins/loaders/cdx/plugin.xml.in: ditto.
2007-12-19 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: use goffice-0.6 >= 0.6.1.
* libs/canvas/gcp-canvas-line.c: do not crash when arrow heads have
not been updated.
* libs/gcp/atom.cc: do not add an object twice.
* libs/gcp/bond.cc: ditto.
* libs/gcp/electron.cc: ditto.
* libs/gcp/fragment.cc: ditto.
* libs/gcp/mesomery-arrow.cc: ditto.
* libs/gcp/reaction-arrow.cc: ditto, and initialize m_TypeChanged and fix
update for full headed reversible reaction arrows.
* libs/gcp/reaction-operator.cc: do not add an object twice.
* libs/gcp/text.cc: ditto.
* libs/gcu/object.cc: fix loading grouped arrows in gchempaint.
* plugins/paint/arrows/retrosynthesisarrow.cc: ditto.
* plugins/paint/residues/pseudo-atom.cc: ditto.
* plugins/paint/selection/group.cc: fix loading of groups with new Add
method.
* plugins/paint/selection/group.h: ditto.
2007-12-16 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: add new directories
* libs/gcp/application.cc: initial work on new loaders.
* libs/gcu/Makefile.am: add new files.
* libs/gcu/cmd-context.cc: new goffice command context.
* libs/gcu/cmd-context.h: ditto.
* libs/gcu/loader.cc: new loader class.
* libs/gcu/loader.h: ditto.
* plugins/Makefile.am: add loaders directory.
* programs/paint/main.cc: initialize loaders.
* plugins/loaders/Makefile.am: new directory.
* plugins/loaders/cdxml/Makefile.am: ditto.
* plugins/loaders/cdxml/cdxml.cc: new cdxml loader (don't work yet).
2007-12-15 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/spectrumdoc.cc: enhance loading of X++(Y..Y) data.
* libs/gcu/spectrumdoc.h: add new units.
2007-12-14 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/spectrumdoc.cc: add axes labels and limit transmittance
from 0. to 1..
* libs/gcu/spectrumdoc.h: ditto.
* libs/gcu/spectrumview.cc: ditto.
* libs/gcu/spectrumview.h: ditto.
2007-12-13 Jean Bréfort <jean.brefort@normalesup.org>
* all files: fix various compilation issues, fixes build with
gcc snapshot. [#21764]
2007-12-10 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/chem3ddoc.cc: fix atoms position.
* libs/gcu/glview.cc: fix print and image export when off-screen
rendering does not work. [#21946]
* libs/gcu/glview.h: ditto.
* programs/3d/main.cc: don't crash if no display type is given.
2007-12-05 Jean Bréfort <jean.brefort@normalesup.org>
* libs/canvas/gcp-canvas-shape.c:
(gnome_canvas_shape_ext_export_svg),
(gnome_canvas_shape_ext_draw_cairo): implement the curveto case. [#21715]
* libs/canvas/pango-layout-to-svg.c: (pango_layout_to_svg): fix
vertical text alignment after subscript/superscript. [#21715]
2007-11-29 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: requests goffice-0.5.4.
* goffice/gchemutils.cc: updated after recent changes in goffice api.
* programs/table/gchemtable-curve.cc: ditto.
2007-11-29 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: ensure goffice has gnome support.
2007-11-21 Jean Bréfort <jean.brefort@normalesup.org>
* */*/*.cc: better use of namespaces.
* */*/*.h:ditto.
* libs/gcp/theme.cc: fixed a crash when adding a file theme for a file
without title.
* mozilla-plugin/Makefile.am: initial support of gchempaint files.
* mozilla-plugin/chem-viewer.cc: ditto.
* mozilla-plugin/moz-plugin.c: (NP_GetMIMEDescription): ditto.
2007-11-18 Jean Bréfort <jean.brefort@normalesup.org>
* programs/crystal/atomsdlg.cc: inactivate the change signal in
the radii menu when populating the menu. [#21576]
* programs/crystal/atomsdlg.h: ditto.
2007-11-05 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/crystaldoc.cc: add a namespace to files so that they are
correctly identified as gcrystal files.
* samples/*.gcrystal: ditto.
2007-11-01 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: fixed compilation.
* libs/gcu/chem3ddoc.cc: implement wireframe mode.
* programs/3d/application.cc: implement support for command line options.
* programs/3d/application.h: ditto.
* programs/3d/main.cc: ditto and add wireframe.
* programs/3d/window.cc: ditto.
2007-10-29 Jean Bréfort <jean.brefort@normalesup.org>
* lib/application.cc: fix test for file creation.
* lib/document.cc: update m_Empty after each change.
2007-10-25 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: add seamonkey to mozilla avatars and fix goffice component
installation path.
* gcu-unstable.pc.in: removed.
* gcu.pc.in: removed.
2007-10-23 Daniel Leidert <daniel.leidert.spam@gmx.net>
* configure.ac: Fixed AC_CONFIG_FILES and AC_OUTPUT usage.
2007-10-22 Daniel Leidert <daniel.leidert.spam@gmx.net>
* configure.ac (GOFFICE_PLUGINS_DIR): Handle option without a given
value.
2007-10-21 Jean Bréfort <jean.brefort@normalesup.org>
* glade/paint/preferences.glade: add a default theme key and use it to
set the default theme [sr #106032,item #3].
* libs/gcp/preferences.cc: ditto.
* libs/gcp/preferences.h: ditto.
* libs/gcp/theme.cc: ditto.
* libs/gcp/theme.h: ditto.
* programs/paint/gchempaint.schemas.in: ditto.
2007-10-20 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/mesomery.cc: fix an infinite loop condition.
* libs/gcp/view.cc: do not change the default element when changing
the nature of an atom using the keyboard [sr #106032,item #2].
* libs/gcu/formula.cc: support non ambiguous residues.
* libs/gcu/formula.h: ditto.
* libs/gcu/residue.cc: ditto.
* libs/gcu/residue.h: ditto.
* plugins/paint/residues/residues-dlg.cc: ditto.
2007-10-17 Daniel Leidert <daniel.leidert.spam@gmx.net>
* libs/Makefile.am: Added MAINTAINERCLEANFILES to remove Makefile.in.
* libs/canvas/Makefile.am: Ditto.
* libs/gcp/Makefile.am: Ditto.
2007-10-15 Daniel Leidert <daniel.leidert.spam@gmx.net>
* Makefile.am (MAINTAINERCLEANFILES): Remove gnome-doc-utils.make on
maintainer-clean.
(DISTCHECK_CONFIGURE_FLAGS): Disable schemas installation for
distcheck target.
* configure.ac: Fix broken output indentation.
* gcu.pc.in: Added URL field. Fixed goffice package name.
* gcu-unstable.pc.in: Ditto.
* docs/man/Makefile.am: Formatting changes. Backported the better
version of the 0.8 series. Added new manpages and their sources (all
sources have been renamed!). Removed GNU make extensions usage.
* docs/man/gcu_entities.dtd.in: Added an prefix to easily switch
between stable and development version manpages. Added a central
copyright/legalnotice note.
* gcu_man_legal.xml: Added.
* gchem3d-viewer.1.xml: Updated. Renamed to
gchem3d-viewer-unstable.1.xml.
* gchemcalc.1.xml: Ditto. Renamed to gchemcalc-unstable.1.xml.
* gchemtable.1.xml: Ditto. Renamed to gchemtable-unstable.1.xml.
* libgcu.3.xml: Ditto. Renamed to libgcu-unstable.3.xml.
* gchem3d-viewer.1: Ditto. Renamed to gchem3d-viewer-unstable.1.
* gchemcalc.1: Ditto. Renamed to gchemcalc-unstable.1
* gchemtable.1: Ditto. Renamed to gchemtable-unstable.1.
* libgcu.3: Ditto. Renamed to libgcu-unstable.3.
* gchempaint-unstable.1.xml: Added.
* gcrystal-unstable.1.xml: Ditto.
* gspectrum-unstable.1.xml: Ditto.
* gchempaint-unstable.1: Ditto.
* gcrystal-unstable.1: Ditto.
* gspectrum-unstable.1: Ditto.
* docs/reference/Makefile.am: Backported from 0.8 series. Removed GNU
make extensions usage.
* plugins/paint/arrows/Makefile.am: Backported cleaner version from
0.8 series. Formatting fixes. Fixed install-data-local and added
missing uninstall-local targets for schemas installation.
* plugins/paint/atoms/Makefile.am: Ditto.
* plugins/paint/bonds/Makefile.am: Ditto.
* plugins/paint/cycles/Makefile.am: Ditto.
* plugins/paint/residues/Makefile.am: Ditto.
* plugins/paint/selection/Makefile.am: Ditto.
* plugins/paint/templates/Makefile.am: Ditto.
* plugins/paint/wikipedia/Makefile.am: Ditto.
* plugins/paint/text/Makefile.am: Ditto.
(gladedir): Fixed location.
* database/Makefile.am: Inner formatting changes. Drop EXTRA_DIST in
favour of dist_ suffixes. Used alphabetical ordering.
* glade/Makefile.am: Ditto.
* glade/crystal/Makefile.am: Ditto.
* glade/paint/Makefile.am: Ditto.
* glade/table/Makefile.am: Ditto.
* pixmaps/Makefile.am: Ditto.
* plugins/paint/Makefile.am: Ditto.
* programs/3d/Makefile.am: Ditto.
* programs/calc/Makefile.am: Ditto.
* programs/spectra/Makefile.am: Ditto.
* programs/table/Makefile.am: Ditto.
* themes/paint/Makefile.am: Ditto.
* goffice/Makefile.am: Ditto. Further added MAINTAINERCLEANFILES to
remove the created Makefile.in.
* programs/crystal/Makefile.am: Ditto.
(schemasdir): Don't ignore GCONF_SCHEMA_FILE_DIR.
* programs/paint/Makefile.am: Likewise. Added missing
install-data-local and uninstall-local targets for the schemas
installation.
* plugins/Makefile.am: Added MAINTAINERCLEANFILES to remove the
created Makefile.in.
* templates/Makefile.am: Ditto.
* templates/paint/Makefile.am: (xmldir): Fixed installation location.
* po/POTFILES.in: Added missing files to make intltool happy.
* programs/3d/gchem3d-viewer-unstable.desktop.in: Make it compliant to
the latest specification 1.0 of the desktop entry spec. Declare this
version compliancy via the Version key.
* programs/3d/gchem3d-viewer.desktop.in: Ditto.
* programs/calc/gchemcalc-unstable.desktop.in: Ditto.
* programs/calc/gchemcalc.desktop.in: Ditto.
* programs/crystal/gcrystal-unstable.desktop.in: Ditto.
* programs/crystal/gcrystal.desktop.in: Ditto.
* programs/paint/gchempaint-unstable.desktop.in: Ditto.
* programs/paint/gchempaint.desktop.in: Ditto.
* programs/table/gchemtable-unstable.desktop.in: Ditto.
* programs/table/gchemtable.desktop.in: Ditto.
* programs/spectra/gspectrum-unstable.desktop.in: Ditto.
(MimeType): Fixed (must end with semicolon).
* programs/spectra/gspectrum.desktop.in: Likewise.
2007-10-08 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/formula.cc: initial work to parse formulas with residues.
* libs/gcu/residue.cc: add gcu::Residue::MaxSymbolLength.
* libs/gcu/residue.h: ditto.
2007-10-01 Jean Bréfort <jean.brefort@normalesup.org>
* programs/spectra/window.cc: implemented printing.
* programs/spectra/window.h: ditto.
2007-09-30 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: requests gtk+>=2.12.0 and goffice>=0.5.1.
* goffice/gchemutils.cc: use the new component API.
* libs/gcp/application.cc: fixed an issue when importing from OpenBabel.
* libs/gcp/document.cc: use new go-math.h path.
* libs/gcu/chem3ddoc.cc: started work on wireframe rendering.
* libs/gcu/element.cc: use new go-math.h path.
* libs/gcu/gtkperiodic.c: (gtk_periodic_init), use new Gtk+ tooltips.
(gtk_periodic_finalize): ditto.
* libs/gcu/spectrumdoc.cc: import spectrum type.
* libs/gcu/spectrumdoc.h: ditto.
* libs/gcu/spectrumview.cc: limit x axis bounds to spectrum bounds.
* libs/gcu/spectrumview.h: ditto.
* programs/spectra/gspectrum-unstable.desktop.in: add mime type.
* programs/spectra/gspectrum.desktop.in: ditto.
* programs/spectra/window.cc: implement copying as Goffice graph or image.
* programs/spectra/window.h: ditto.
* programs/table/gchemtable-curve.cc: update goffice use.
* programs/table/gchemtable-data.cc: use new go-math.h path.
2007-09-27 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: needs gtk+ >= 2.12.0.
* database/residues.xml.in: add five new definitions.
2007-09-25 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/spectrumdoc.cc: load (XY..XY) data.
2007-09-25 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: emit a mor meaningful message when a file
type is not supported.
* plugins/paint/bonds/bondtool.cc: don't crash if mouse cursor moves
through an item without associated object.
2007-09-23 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/spectrumdoc.cc: fixed various data reading issues in
(X++(Y..Y)) mode.
2007-09-22 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/spectrumdoc.cc: load data and display the spectrum.
* libs/gcu/spectrumdoc.h: ditto.
* libs/gcu/spectrumview.cc: ditto.
* libs/gcu/spectrumview.h: ditto.
* programs/spectra/application.cc: ditto.
* programs/spectra/gspectrum.cc: ditto.
* programs/spectra/window.cc: ditto.
2007-09-17 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/crystaldoc.cc: fixed compilation with OpenBabel-2.1.x.
2007-09-17 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.9.2) and add new
program (gspectrum)..
* libs/gcu/Makefile.am: add new files for spectra support.
* libs/gcu/application.cc: use string instead of char* for cur dir.
* libs/gcu/application.h: ditto.
* libs/gcu/chem3ddoc.cc: removed extra spaces.
* libs/gcu/gtkspectrumviewer.cc: started the imlementation.
* libs/gcu/spectrumdoc.cc: new document class for spectra.
* libs/gcu/spectrumdoc.h: ditto.
* libs/gcu/spectrumview.cc: new view class for spectra.
* libs/gcu/spectrumview.h: ditto.
* pixmaps/Makefile.am: add gspectrum icons.
* pixmaps/gspectrum128.png: ditto.
* pixmaps/gspectrum32.png: ditto.
* pixmaps/gspectrum48.png: ditto.
* pixmaps/gspectrum72.png: ditto.
* programs/3d/main.cc: updated command line help.
* programs/Makefile.am: added spectra directory.
* programs/spectra/Makefile.am: new gspectrum program.
* programs/spectra/application.cc: ditto.
* programs/spectra/application.h: ditto.
* programs/spectra/document.cc: ditto.
* programs/spectra/document.h: ditto.
* programs/spectra/gspectrum-unstable.desktop.in: ditto.
* programs/spectra/gspectrum.cc: ditto.
* programs/spectra/gspectrum.desktop.in: ditto.
* programs/spectra/view.cc: ditto.
* programs/spectra/view.h: ditto.
* programs/spectra/window.cc: ditto.
* programs/spectra/window.h: ditto.
2007-09-15 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: rewrote the mozilla plugin related stuff
so that it also works with iceweasel.
* docs/reference/Doxyfile.in: add new spectrum related files.
* libs/gcu/Makefile.am: ditto.
* libs/gcu/chem3ddoc.cc: rewrote the Draw method.
* libs/gcu/chem3ddoc.h: ditto.
* libs/gcu/chemistry.h:updated the documentation.
* libs/gcu/crystalatom.cc: remove the Draw method.
* libs/gcu/crystalatom.h: ditto.
* libs/gcu/crystaldoc.cc: rewrote the Draw method.
* libs/gcu/crystaldoc.h: ditto.
* libs/gcu/crystalline.cc: remove the Draw method.
* libs/gcu/crystalline.h: ditto.
* libs/gcu/cylinder.cc: use OpenBabel::vector3.
* libs/gcu/cylinder.h: ditto.
* libs/gcu/gldocument.h: changed the Draw method signature.
* libs/gcu/glview.cc: ditto.
* libs/gcu/gtkchem3dviewer.cc: added cylinders mode (and wireframe
which is not implemented yet).
* libs/gcu/gtkchem3dviewer.h: fixed documentation.
* libs/gcu/gtkspectrumviewer.cc: new widget (not yet implemented).
* libs/gcu/gtkspectrumviewer.h: ditto.
* libs/gcu/matrix.cc: define multipying an OpenBabel::vector3.
* libs/gcu/matrix.h: ditto.
* libs/gcu/sphere.cc: use OpenBabel::vector3.
* libs/gcu/sphere.h: ditto.
* libs/gcu/vector.cc: removed obsolete class Vector3d.
* libs/gcu/vector.h: ditto.
* programs/3d/window.cc: add cylinders mode in menu.
2007-09-09 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/fontsel.cc: don't crash in case of missing font.
* libs/gcp/theme.cc: don't load themes with duplicate name.
2007-09-08 Jean Bréfort <jean.brefort@normalesup.org>
* database/residues.xml.in: add new residues.
* libs/gcp/application.cc: use a std::string for old_locale.
* libs/gcp/document.cc: allow clipbloard disabling for residues
dialog box.
* libs/gcp/document.h: ditto.
* libs/gcp/molecule.cc: add Molecule::GetRawFormula and fix
residue loading.
* libs/gcp/molecule.h: ditto.
* libs/gcp/view.cc: don't copy if document does not support clipboard.
* libs/gcp/widgetdata.cc: don't attempt to move an empty selection.
* libs/gcu/bond.cc: use dynamic_cast to identify atoms.
* libs/gcu/residue.cc: initialize m_Generic.
* plugins/paint/residues/residues-dlg.cc: fix various issues.
2007-09-03 Jean Bréfort <jean.brefort@normalesup.org>
* programs/crystal/Makefile.am: fix use of --disable-schemas-install
[#20943].
2007-08-30 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/residue.cc: add an bool to check if symbol is
ambiguous (if an element has the same symbol).
* libs/gcu/residue.h: ditto.
* program/calc/Makefile.am: remove residue.*.
* program/calc/gchemcalc.cc: load the residues database.
* program/calc/residue.cc: removed since everything is needed
by gcu::Formula and pertains to libgcu.
* program/calc/residue.h: ditto.
2007-08-27 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/crystaldoc.cc: update openbabel related code.
* programs/crystal/document.cc: ditto.
2007-08-26 Jean Bréfort <jean.brefort@normalesup.org>
* database/Makefile.am: add residues database.
* database/residues.xml.in: new residues database.
* libs/gcp/application.cc: fix help file name.
* libs/gcp/document.cc: implement Document::Clear, fix a
memory leak and some potential crashers.
* libs/gcp/document.h: add Document::Clear.
* libs/gcp/residue.cc: more work on residues.
* libs/gcp/residue.h: ditto.
* libs/gcu/residue.cc: ditto.
* libs/gcu/residue.h: ditto.
* plugins/paint/residues/Makefile.am: ditto.
* plugins/paint/residues/plugin.cc: ditto.
* plugins/paint/residues/plugin.h: ditto.
* plugins/paint/residues/pseudo-atom.cc: ditto.
* plugins/paint/residues/pseudo-atom.h: ditto.
* plugins/paint/residues/residues-dlg.cc: ditto.
* plugins/paint/residues/residues-dlg.h: ditto.
* plugins/paint/residues/residues.glade: ditto.
2007-08-23 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/document.cc: don't duplicate NULL strings.
* libs/gcu/crystaldoc.cc: fix various space groups support
issues.
* libs/gcu/crystaldoc.h: ditto.
* programs/crystal/application.cc: ditto..
* programs/crystal/document.cc: ditto..
* programs/crystal/document.h: ditto..
2007-08-14 Jean Bréfort <jean.brefort@normalesup.org>
* programs/crystal/application.cc: add missing ).
2007-08-14 Jean Bréfort <jean.brefort@normalesup.org>
* programs/crystal/application.cc: add appropriate
#ifdef directives.
2007-08-14 Jean Bréfort <jean.brefort@normalesup.org>
* programs/crystal/document.cc: only compile Import if
an appropriate OpenBabel version is available.
* programs/crystal/document.h: ditto.
2007-08-14 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/crystaldoc.cc: add ImportOB method.
* libs/gcu/crystaldoc.h: ditto.
* programs/crystal/document.cc: removed ImportOB method.
* programs/crystal/document.h: ditto.
2007-08-14 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: remove -DGTK_DISABLE_DEPRECATED to make things
compile with newer versions.
* libs/gcu/crystaldoc.cc: don't initialize m_SpaceGroup when
it does not exist.
2007-08-13 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: check OpenBabel version.
* libs/gcp/Makefile.am: add new residue files.
* libs/gcp/molecule.cc: changed smiles to SMILES.
* libs/gcp/molecule.h: ditto.
* libs/gcp/residue.cc: new file.
* libs/gcp/residue.h: ditto.
* libs/gcp/target.cc: signal handlers should return false.
* libs/gcu/crystaldoc.cc: add space group support.
* libs/gcu/crystaldoc.h: ditto.
* libs/gcu/residue.cc: more work on residues.
* libs/gcu/residue.h: ditto.
* plugins/paint/residues/residues-dlg.cc: ditto.
* plugins/paint/residues/residues-dlg.h: ditto.
* plugins/paint/residues/residues.glade: ditto.
* plugins/paint/selection/brackets24.png: new brackets tool
(not yet implemented).
* plugins/paint/selection/bracketstool.cc: ditto.
* plugins/paint/selection/bracketstool.h: ditto.
* plugins/paint/selection/Makefile.am: ditto.
* plugins/paint/selection/plugin.cc: ditto.
* programs/calc/gchemcalc.cc: fixed copyright.
* programs/calc/residue.cc: new gccResidue class.
* programs/calc/residue.h: ditto.
* programs/crystal/document.cc: add support for space groups.
* programs/table/Makefile.am: add new files and code to allow
curves customiszation.
* programs/table/gchemtable-curve.cc: ditto.
* programs/table/gchemtable-curve.h: ditto
* programs/table/gchemtable-data-allocator.cc: ditto
* programs/table/gchemtable-data-allocator.h: ditto
* programs/table/gchemtable-data.cc: ditto
* programs/table/gchemtable-data.h: ditto
* programs/table/gchemtable-graph-editor.cc: ditto
* programs/table/gchemtable-graph-editor.h: ditto
2007-08-07 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/theme.cc: don't load backups [#20705].
* libs/gcp/view.cc: fix changing the element using the
keyboard [#20706].
* libs/gcu/application.cc: never try using nautilus as an
help viewer.
2007-08-07 Daniel Leidert <daniel.leidert@wgdd.de>
* programs/Makefile.in (MAINTAINERCLEANFILES): Remove Makefile.in with
the maintainer-clean target.
2007-07-29 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/crystalatom.cc: add a new member to enable
using only part of the radius when rendering.
* libs/gcu/crystalatom.h: ditto.
* programs/crystal/application.cc: partially import
cif files.
* programs/crystal/document.cc: ditto.
* programs/crystal/document.h: ditto.
* programs/crystal/main.cc: ditto.
2007-07-19 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/molecule.cc: no contextual menu for residues.
* libs/gcp/molecule.h: ditto.
2007-07-16 Jean Bréfort <jean.brefort@normalesup.org>
* libs/canvas/gcp-canvas-shape.c: (gnome_canvas_shape_ext_bounds):
never use a non-existing path.
* libs/gcp/view.cc: don't activate menus when there is no window;
never change a pseudo-atom atomic number.
* plugins/paint/bonds/bondtool.cc: don't modify a locked bond.
* plugins/paint/bonds/chaintool.cc: fix keyboard state related
issues.
* plugins/paint/bonds/chaintool.h: ditto.
* plugins/paint/residues/Makefile.am: add new files.
* plugins/paint/residues/plugin.cc: add new gcpPseudoAtom class.
* plugins/paint/residues/pseudo-atom.cc: ditto.
* plugins/paint/residues/pseudo-atom.h: ditto.
* plugins/paint/residues/residues-dlg.cc: create an initial residue
(methyl) and enhance the GUI..
* plugins/paint/residues/residues-dlg.h: ditto.
* plugins/paint/residues/residues.glade: ditto.
* plugins/paint/selection/erasertool.cc: do not delete a locked
object.
* plugins/paint/selection/selectiontool.cc:don't activate menus
when there is no window.
2007-07-13 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/paint/C/figures/elt-menu.png: new screenshot.
* docs/help/paint/C/gchempaint-unstable.xml: updated docs
after fixing sr #105937.
* libs/gcp/application.cc: destroy the window, not the doc
when a file load fails. [#20468]
* libs/gcp/document.cc: set current doc to NULL when
destroying. [#20468]
* libs/gcp/view.cc: fixed caps lock state change.
* libs/gcu/application.cc: don't call gtk_main_quit before
gtk_main.
* libs/gcu/application.h: ditto.
* plugins/paint/bonds/chaintool.cc: fixed various issues.
* plugins/paint/bonds/chaintool.h: ditto.
* themes/paint/ACS_Document_1996: new theme (tanks to
Takashi Suyama). [sr #105938]
* themes/paint/Makefile.am: add new theme.
2007-07-12 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/tool.cc: no more need to search for an atom, this
is already done by the view.
* libs/gcp/tools.cc: add Tools::SetElement.
* libs/gcp/tools.h: ditto.
* libs/gcp/view.cc: change current element using the keyboard
and change the nature of the atom under the cursor if any.
[sr #105937]
* libs/gcp/view.h: ditto.
* plugins/paint/bonds/bondtool.cc: use either CapsLock
or AltGr to change the default direction of a new bond.
* plugins/paint/bonds/bondtool.h:
* plugins/paint/bonds/chaintool.cc: add shortcuts to
change the chain length.
* plugins/paint/bonds/chaintool.h: ditto.
2007-07-09 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/paint/C/gchempaint-unstable.xml: updated docs.
* docs/help/paint/C/gchempaint.xml: ditto.
* libs/canvas/gcp-canvas-group.c: (gnome_canvas_group_print_init),
(gnome_canvas_group_ext_draw_cairo): add new cairo backend for
use until we have a cairo based canvas.
* libs/canvas/gcp-canvas-line.c: (gnome_canvas_line_print_init),
(gnome_canvas_line_ext_draw_cairo): ditto.
* libs/canvas/gcp-canvas-pango.c: (gnome_canvas_pango_print_init),
(gnome_canvas_pango_draw_cairo): ditto.
* libs/canvas/gcp-canvas-shape.c:
(gnome_canvas_shape_ext_print_init),
(gnome_canvas_shape_ext_draw_cairo): ditto.
* libs/canvas/gprintable.c: (g_printable_draw_cairo): ditto.
* libs/canvas/gprintable.h: ditto.
2007-07-05 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: add the residues plugin.
* libs/gcp/Makefile.am: add target.*.
* libs/gcp/application.cc: use targets instead of windows,
and add support for dynamic windows menus and command line
options.
* libs/gcp/application.h: ditto.
* libs/gcp/document.cc: ditto.
* libs/gcp/target.cc: new gcp::Target class (a parent for Window).
* libs/gcp/target.h: ditto.
* libs/gcp/window.cc: make gcp::Window derive from gcp::Target.
* libs/gcp/window.h: ditto.
* libs/gcu/Makefile.am: add new files.
* libs/gcu/cylinder.cc: imported from Avogadro.
* libs/gcu/cylinder.h: ditto.
* libs/gcu/macros.h: fixed some issues.
* libs/gcu/matrix.cc: add GLMatrix class.
* libs/gcu/matrix.h: ditto.
* libs/gcu/object.h: updated copyright.
* libs/gcu/residue.cc: new class.
* libs/gcu/residue.h: ditto.
* libs/gcu/sphere.cc: imported from Avogadro.
* libs/gcu/sphere.h: ditto.
* libs/gcu/vector.cc: support for spheres and cylinders imported
from Eigen.
* libs/gcu/vector.h: ditto.
* plugins/paint/Makefile.am: ad new plugin.
* plugins/paint/residues/Makefile.am: ditto.
* plugins/paint/residues/plugin.cc: ditto.
* plugins/paint/residues/plugin.h: ditto.
* plugins/paint/residues/residues-dlg.cc: ditto.
* plugins/paint/residues/residues-dlg.h: ditto.
* plugins/paint/residues/residues.glade ditto.:
* programs/paint/main.cc: supports dynamic command line options.
* programs/paint/standaloneapp.cc: use gcp::Target.
2007-06-30 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.9.1).
* docs/help/3d/gchem3d-viewer-unstable.omf.in:
use Applications|Education|Science as category.
* docs/help/3d/gchem3d-viewer.omf.in: ditto.
* docs/help/calc/gchemcalc-unstable.omf.in: ditto.
* docs/help/calc/gchemcalc.omf.in: ditto.
* docs/help/crystal/gcrystal-unstable.omf.in: ditto.
* docs/help/paint/gchempaint-unstable.omf.in: ditto.
* docs/help/paint/gchempaint.omf.in: ditto.
* docs/help/table/gchemtable-unstable.omf.in: ditto.
* docs/help/table/gchemtable.omf.in: ditto.
2007-06-28 Jean Bréfort <jean.brefort@normalesup.org>
* mozilla-plugin/moz-plugin.c: (ChemNew): fixed a bug.
* programs/crystal/Makefile.am: even better fix.
* programs/paint/Makefile.am: ditto.
2007-06-28 Jean Bréfort <jean.brefort@normalesup.org>
* programs/crystal/Makefile.am: really fixed.
* programs/paint/Makefile.am: ditto.
2007-06-28 Jean Bréfort <jean.brefort@normalesup.org>
* Makefile.am: more build fixes.
* programs/crystal/Makefile.am: ditto.
* programs/paint/Makefile.am: ditto.
2007-06-27 Jean Bréfort <jean.brefort@normalesup.org>
* tests/Makefile.am: fixed paths.
2007-06-27 Jean Bréfort <jean.brefort@normalesup.org>
* docs/reference/Makefile.am: fixed build issues.
* goffice/Makefile.am: ditto.
* libs/gcp/Makefile.am: ditto.
* plugins/paint/arrows/Makefile.am: ditto.
* programs/paint/Makefile.am: ditto.
2007-06-27 Jean Bréfort <jean.brefort@normalesup.org>
* libs/canvas/gnome-print-pango.c: (gpc_print_pango_layout_print):
fix a compilation warning.
* libs/gcp/reaction-arrow.cc: can now have one attached
object.
* libs/gcp/reaction-arrow.h: ditto.
* libs/gcp/reaction-prop-dlg.cc: ditto.
* libs/gcp/reaction-prop.cc: ditto.
* libs/gcp/reaction-prop.h: ditto.
* libs/gcp/theme.cc: add a new padding value for arrow
attached objects.
* libs/gcp/theme.h:
* libs/gcp/view.cc: calls EmitSignal when deleting
objects.
2007-06-27 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: new methods to modify menus from
plugins.
* libs/gcp/application.h: ditto.
* libs/gcp/window.cc: ditto.
2007-06-24 Jean Bréfort <jean.brefort@normalesup.org>
* glade/paint/Makefile.am: add new glade file.
* glade/paint/arrow-object.glade: initial glade file for
reactions arrows attached objects properties.
* libs/gcp/Makefile.am: add reaction-prop-dlg.*
* libs/gcp/application.cc: correctly create the
ReactionProp type.
* libs/gcp/reaction-arrow.cc: select, move and update
children.
* libs/gcp/reaction-arrow.h: ditto.
* libs/gcp/reaction-prop-dlg.cc: new dialog.
* libs/gcp/reaction-prop-dlg.h: ditto.
* libs/gcp/reaction-prop.cc: Load and Save implemented,
and enhanced role support.
* libs/gcp/reaction-prop.h: ditto.
2007-06-20 Jean Bréfort <jean.brefort@normalesup.org>
* pixmaps/Makefile.am: use new icons.
* programs/3d/gchem3d-viewer-unstable.desktop.in: ditto.
* programs/3d/gchem3d-viewer.desktop.in: ditto.
* programs/calc/gchemcalc-unstable.desktop.in: ditto.
* programs/calc/gchemcalc.desktop.in: ditto.
* programs/table/Makefile.am: ditto.
* programs/table/gchemtable-curve.cc: ditto.
* programs/table/gchemtable-curve.h: ditto.
* programs/table/gchemtable-unstable.desktop.in: ditto.
* programs/table/gchemtable.desktop.in: ditto.
2007-06-18 Jordan Mantha <mantha@ubuntu.com>
* Added 32,48,72, and 128 pixel icons for gchem3d-viewer,
gchemtable, and gchemcalc
2007-06-16 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: removed
* libs/gcp/Makefile.am: new ReactionProp class.
* libs/gcp/application.cc: ditto.
* libs/gcp/reaction-arrow.cc: moved code from reactions
plugin.
* libs/gcp/reaction-arrow.h: ditto.
* libs/gcp/reaction-prop.cc: new ReactionProp class.
* libs/gcp/reaction-prop.h: ditto.
* plugins/paint/Makefile.am: removed obsolete reactions
plugin.
* plugins/paint/reactions/.cvsignore: ditto.
* plugins/paint/reactions/Makefile.am: ditto.
* plugins/paint/reactions/plugin.cc: ditto.
* plugins/paint/reactions/plugin.h: ditto.
2007-06-11 Jean Bréfort <jean.brefort@normalesup.org>
* templates/paint/templates.xml.in: fixed isoleucine template.
2007-06-09 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/application.cc: make copying as text optional.
* libs/gcp/settings.cc: ditto.
* libs/gcp/settings.h: ditto.
* libs/gcp/view.cc: ditto.
* libs/gcp/widgetdata.cc: ditto.
* plugins/paint/text/fragmenttool.cc: ditto.
* plugins/paint/text/texttool.cc: ditto.
* programs/paint/gchempaint.schemas.in: ditto.
2007-06-05 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/text.h: add gcp::Text::SetText (char const*).
* libs/gcp/view.cc: add image/bmp as clipboard target and
gcp::View::BuildPixbuf to support copying pixbufs.
* libs/gcp/view.h: add gcp::View::BuildPixbuf.
* libs/gcp/widgetdata.cc: implement copying pixbufs.
2007-05-22 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/cycles/cycletool.cc: fixed two bugs.
[#19932] and [#19933].
2007-05-20 Jean Bréfort <jean.brefort@normalesup.org>
* programs/crystal/Makefile.am: add -DPIXMAPSDIR.
* programs/crystal/window.cc: use logo in about box.
2007-05-15 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/paint/C/figures/Hposdlg.png: add documentation
for the hydrogen position new feature.
* docs/help/paint/C/gchempaint-unstable.xml: ditto.
* plugins/paint/reactions/Makefile.am: added missing.
2007-05-12 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcu/macros.h: ensure GCU_CONF_GET_STRING returns
a non NULL value if it is provided a default.
2007-05-11 Jean Bréfort <jean.brefort@normalesup.org>
* AUTHORS: update list.
* libs/gcp/application.cc: don't add two extensions
when saving as image.
* programs/crystal/application.cc: initial work on CIF
support.
* programs/crystal/document.cc: ditto.
* programs/crystal/document.h: ditto.
2007-05-10 Jean Bréfort <jean.brefort@normalesup.org>
* glade/paint/H-pos.glade: fixed buttons names.
* libs/gcp/Hposdlg.cc: force atom update after a change.
* libs/gcp/atom.cc: fixed typo in Save and force update
when loading.
* templates/paint/haworth.xml.in: updated (Julian Sikorski).
2007-05-10 Jean Bréfort <jean.brefort@normalesup.org>
* Makefile.am: remove pc file.
* configure.ac: add reactions plugin.
* gcu-unstable.pc.in: cleaned.
* glade/paint/Makefile.am: add H-pos.glade. [#19842]
* glade/paint/H-pos.glade: ditto.
* glade/paint/preferences.glade: fixed bounds for
all spin buttons. [#19845]
* libs/gcp/Hposdlg.cc: allow changing the position of
hydrogen atoms. [#19842]
* libs/gcp/Hposdlg.h: ditto.
* libs/gcp/Makefile.am: add new Hposdlg.*. [#19842]
and add LOCALEDR and GLADEDIR to DEFS.
* libs/gcp/about.cc: fixed path to logo.
* libs/gcp/atom.cc: fixed memory leaks in BuildContextualMenu,
allow changing the position of hydrogen atoms. [#19842]
* libs/gcp/atom.h: allow changing the position of
hydrogen atoms. [#19842]
* libs/gcp/bond.cc: fixed memory leaks in BuildContextualMenu.
* libs/gcp/docprop.cc: use GLADEDIR.
* libs/gcp/mesomery.cc: fixed memory leaks in BuildContextualMenu.
* libs/gcp/molecule.cc: ditto.
* libs/gcp/newfiledlg.cc: use GLADEDIR.
* libs/gcp/preferences.cc: ditto.
* libs/gcp/reactant.cc: fixed memory leaks in BuildContextualMenu.
* libs/gcp/reaction-arrow.h:
* libs/gcp/reaction.cc:
* libs/gcp/stringdlg.cc: use GLADEDIR.
* libs/gcp/theme.cc: use LOCALEDIR.
* libs/gcp/theme.cc: fixed crashers and use GLADEDIR.
* libs/gcp/tool.h: add some doc.
* libs/gcp/tools.cc: use GLADEDIR.
* libs/gcp/view.cc: don't keep zombies in gcpWidgetData::Items.
Fixes crashes. [#19840]
* libs/gcp/widgetdata.cc: fixed gcp xml namespace.
* libs/gcp/window.cc: fixed a memory leak.
* libs/gcu/object.cc: add support to modify contextual menus
from outside the class code.
* libs/gcu/object.h: ditto.
* pixmaps/Makefile.am: add new pixmaps.
* pixmaps/gchempaint128.png: copied from GChemPaint.
* pixmaps/gchempaint32.png: ditto.
* pixmaps/gchempaint48.png: ditto.
* pixmaps/gchempaint72.png: ditto.
* pixmaps/gchempaint_logo.png: ditto.
* plugins/paint/Makefile.am: add reactions plugin.
* plugins/paint/arrows/retrosynthesis.cc: fixed memory leaks
in BuildContextualMenu.
* plugins/paint/reactions/plugin.cc: new plugin.
* plugins/paint/reactions/plugin.h: ditto.
* plugins/paint/selection/group.cc: fixed memory leaks
in BuildContextualMenu.
* plugins/paint/templates/templatetool.cc: use correct bond
lengths when pasting the template. [#19838]
* plugins/paint/wikipedia/plugin.cc: add a contextual menu
item.
* plugins/paint/wikipedia/plugin.h: minor cosmetic update.
* plugins/paint/wikipedia/wikipediatool.cc: fixed gcp xml
namespace.
* templates/paint/Makefile.am: add new saccharides templates.
* templates/paint/haworth.xml.in: ditto.
2007-05-09 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: add --with-kde-mime-dir.
* gchemutils.keys.in: removed obsolete.
* gchemutils.mime: ditto.
* programs/crystal/Makefile.am: add kde mime file.
* programs/crystal/x-gcrystal.desktop.in: ditto.
* programs/paint/Makefile.am: add desktop and schemas files.
* programs/paint/gchempaint-unstable.desktop.in: copied from
GChemPaint.
* programs/paint/gchempaint.desktop.in: ditto.
* programs/paint/gchempaint.schemas.in: ditto.
* programs/paint/x-gchempaint.desktop.in: add kde mime file.
2007-04-27 Jean Bréfort <jean.brefort@normalesup.org>
* docs/reference/Makefile.am: do not install docs.
* glade/table/curve.glade: remove buttons (they are replaced
by the menus).
* libs/gcu/Makefile.am: don't install headers.
* plugins/paint/wikipedia/wikipediatool.cc: add Author and
Copyright fields to the PNG file.
* programs/table/gchemtable-curve.cc: add page setup and
print preview.
* programs/table/gchemtable-curve.h: ditto.
2007-04-26 Jean Bréfort <jean.brefort@normalesup.org>
* gchemutils.xml.in: add GChemPaint format.
* libs/gcp/preferences.cc: fix crash when no theme is selected.
* templates/paint/Makefile.am: fixed typo.
2007-04-24 Jean Bréfort <jean.brefort@normalesup.org>
* Makefile.am: add new directories.
* configure.ac: ditto.
* docs/help/Makefile.am: add paint subdir.
* docs/help/paint/C/figures/*.png: copied from GChemPaint.
* docs/help/paint/C/gchempaint-unstable.xml: ditto.
* docs/help/paint/C/gchempaint.xml: ditto.
* docs/help/paint/C/legal.xml: ditto.
* docs/help/paint/Makefile.am: ditto.
* docs/help/paint/gchempaint-unstable.omf.in: ditto.
* docs/help/paint/gchempaint.omf.in: ditto.
* docs/help/paint/omf.make: ditto.
* docs/help/paint/xmldocs.make: ditto.
* libs/gcp/application.cc: fixed Application::FileProcess
signature.
* libs/gcp/application.h: ditto.
* libs/gcp/document.cc: fixed missing xml namespace and
ensure that view related theme data are always updated.
* libs/gcp/molecule.cc: add a public method to retrieve the
InChI.
* libs/gcp/molecule.h: ditto.
* libs/gcp/preferences.cc: block "changed" signal for font
selectors on theme selection.
* libs/gcp/preferences.h: ditto.
* libs/gcp/theme.cc: fixed crashers.
* libs/gcp/view.cc: fixed a potential crasher.
* libs/gcu/application.cc: allow multiple Application instances.
* plugins/paint/Makefile.am: add wikipedia subdir.
* plugins/paint/text/Makefile.am: add MAINTAINERCLEANFILES.
* plugins/paint/wikipedia/Makefile.am: new plugin.
* plugins/paint/wikipedia/favicon.png: ditto.
* plugins/paint/wikipedia/plugin.cc: ditto.
* plugins/paint/wikipedia/plugin.h: ditto.
* plugins/paint/wikipedia/wikipediatool.cc: ditto.
* plugins/paint/wikipedia/wikipediatool.h: ditto.
* themes/Makefile.am: new file.
* themes/paint/Makefile.am: ditto.
* themes/paint/Wikipedia: first global theme (still experimental).
2007-04-23 Daniel Leidert <daniel.leidert@wgdd.de>
* programs/crystal/gcrystal.schemas.in: Fixed typos.
2007-04-21 Jordan Mantha <mantha@ubuntu.com>
* programs/table/gchemtable-app.cc: use explicit casts for
double->guint16
2007-04-21 Jordan Mantha <mantha@ubuntu.com>
* programs/table/gchemtable-app.cc: added covalent radius and block
color schemes.
* programs/table/gchemtable-app.h: ditto
* glade/table/block.glade: added legend for block color scheme
* glade/table/Makefile.am: ditto
2007-04-21 Jean Bréfort <jean.brefort@normalesup.org>
* programs/table/gchemtable-app.cc: added some white spaces
for consistency.
2007-04-19 Jordan Mantha <mantha@ubuntu.com>
* programs/table/gchemtable-app.cc: added electronegativity
color scheme to gchemtable
* programs/table/gchemtable-app.h: ditto
2007-04-14 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/Makefile.am: really fix build.
* libs/gcp/fragment-atom.cc: call gcu::Atom::SetZ instead of
gcp::Atom::SetZ which does not support Z==0.
2007-04-14 Jean Bréfort <jean.brefort@normalesup.org>
* libs/gcp/Makefile.am: fix build.
* libs/gcp/atom.cc: in Atom::Transform2D, don't call itself,
but the parent class method.
2007-04-13 Jean Bréfort <jean.brefort@normalesup.org>
* Makefile.am: add new directories.
* configure.ac: ditto.
* goffice/Makefile.am: initial work on the goffice plugin.
* goffice/gchemutils-priv.h: ditto.
* goffice/gchemutils.cc: ditto.
* goffice/gchemutils.h: ditto.
* goffice/plugin.xml.in: ditto.
* programs/paint/Makefile.am: enhanced build.
2007-04-12 Jean Bréfort <jean.brefort@normalesup.org>
* templates/Makefile.am: new subtree.
* templates/paint/Makefile.am: copied from GChemPaint.
* templates/paint/templates.xml.in: ditto.
2007-04-09 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: removed some old tests (gcc < 0.3 not
anymore supported).
* libs/canvas/gnome-print-pango.c: fixed build issues.
[#19523]
* libs/gcp/about.cc: ditto.
* libs/gcp/about.h: ditto.
* libs/gcp/application.cc: ditto.
* libs/gcp/application.h: ditto.
* libs/gcp/arrow.cc: ditto.
* libs/gcp/atom.cc: ditto.
* libs/gcp/bond.cc: ditto.
* libs/gcp/document.cc: ditto.
* libs/gcp/document.h: ditto.
* libs/gcp/electron.cc: ditto.
* libs/gcp/fontsel.cc: ditto.
* libs/gcp/fragment-atom.cc: ditto.
* libs/gcp/fragment.cc: ditto.
* libs/gcp/mesomery.cc: ditto.
* libs/gcp/molecule.cc: ditto.
* libs/gcp/operation.cc: ditto.
* libs/gcp/operation.h: ditto.
* libs/gcp/reaction-arrow.cc: ditto.
* libs/gcp/reaction-operator.cc: ditto.
* libs/gcp/reaction.cc: ditto.
* libs/gcp/settings.cc: ditto.
* libs/gcp/settings.h: ditto.
* libs/gcp/text.cc: ditto.
* libs/gcp/theme.cc: ditto.
* libs/gcp/view.cc: ditto.
* libs/gcp/window.cc: ditto.
* libs/gcu/application.cc: ditto.
* libs/gcu/application.h: ditto.
* libs/gcu/atom.cc: ditto.
* libs/gcu/bond.cc: ditto.
* libs/gcu/chem3ddoc.cc: ditto.
* libs/gcu/chemistry.cc: ditto.
* libs/gcu/chemistry.h: ditto.
* libs/gcu/crystalatom.cc: ditto.
* libs/gcu/crystalbond.cc: ditto.
* libs/gcu/crystalcleavage.cc: ditto.
* libs/gcu/crystaldoc.cc: ditto.
* libs/gcu/crystaldoc.h: ditto.
* libs/gcu/crystalline.cc: ditto.
* libs/gcu/crystalline.h: ditto.
* libs/gcu/crystalview.cc: ditto.
* libs/gcu/dialog.cc: ditto.
* libs/gcu/element.cc: ditto.
* libs/gcu/element.h: ditto.
* libs/gcu/formula.cc: ditto.
* libs/gcu/glview.cc: ditto.
* libs/gcu/glview.h: ditto.
* libs/gcu/matrix.cc: ditto.
* libs/gcu/matrix2d.cc: ditto.
* libs/gcu/object.cc: ditto.
* libs/gcu/object.h: ditto.
* libs/gcu/value.cc: ditto.
* libs/gcu/value.h: ditto.
* libs/gcu/xml-utils.cc: ditto.
* mozilla-plugin/moz-plugin.c: ditto.
* plugins/paint/arrows/arrowtool.cc: ditto.
* plugins/paint/arrows/retrosynthesis.cc: ditto.
* plugins/paint/arrows/retrosynthesisarrow.cc: ditto.
* plugins/paint/atoms/chargetool.cc: ditto.
* plugins/paint/atoms/chargetool.h: ditto.
* plugins/paint/atoms/electrontool.cc: ditto.
* plugins/paint/atoms/elementtool.cc: ditto.
* plugins/paint/bonds/bondtool.cc: ditto.
* plugins/paint/bonds/chaintool.cc: ditto.
* plugins/paint/cycles/cycletool.cc: ditto.
* plugins/paint/selection/erasertool.cc: ditto.
* plugins/paint/selection/group.cc: ditto.
* plugins/paint/selection/selectiontool.cc: ditto.
* programs/3d/application.cc: ditto.
* programs/calc/gchemcalc.cc: ditto.
* programs/crystal/application.cc: ditto.
* programs/crystal/atom.cc: ditto.
* programs/crystal/atomsdlg.cc: ditto.
* programs/crystal/document.cc: ditto.
* programs/crystal/line.cc: ditto.
* programs/crystal/main.cc: ditto.
* programs/crystal/view.cc: ditto.
* programs/crystal/window.cc: ditto.
* programs/paint/main.cc: ditto.
* programs/table/gchemtable-app.cc: ditto.
* programs/table/gchemtable-curve.cc: ditto.
* programs/table/gchemtable-elt.cc: ditto.
2007-04-06 Jean Bréfort <jean.brefort@normalesup.org>
* glade/table/family.glade: fixed family names.
* lib/application.cc: remove the unuseful application list, only one
application should exist.
* lib/application.h: ditto.
* lib/atom.cc: update BuildContextualMenu signature. Also add a
RemveElectron method and fix remove/add bonds.
* lib/atom.h: ditto.
* lib/bond.cc: update BuildContextualMenu signature and call
gcpAtom::BuildContextualMenu if the click occur near one end of
the bond.
* lib/bond.h: ditto.
* libs/gcp/document.cc: fixed an infinite loop.
* lib/electron.cc: force update of atom parent when destoying.
* lib/mesomery.cc: update BuildContextualMenu signature.
* lib/mesomery.h: ditto.
* lib/molecule.cc: ditto.
* lib/molecule.h: ditto.
* lib/reactant.cc: ditto.
* lib/reactant.h: ditto.
* lib/reaction.cc: ditto.
* lib/reaction.h: ditto.
* lib/view.cc: ditto.
* libs/gcu/atom.cc: cleaned.
* libs/gcu/document.cc: fixed file name.
* libs/gcu/element.cc: fixed atomic mass unit.
* gcu/object.cc: add x and y parameters to
BuildContextualMenu.
* gcu/object.h: ditto.
* plugins/paint/arrows/retrosynthesis.cc: update BuildContextualMenu signature.
* plugins/paint/arrows/retrosynthesis.h: ditto.
* plugins/paint/selection/group.cc: ditto.
* plugins/paint/selection/group.h: ditto.
* plugins/paint/templates/plugin.cc: update copyright.
2007-04-01 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/*/*.png: add mssing files necessary to build.
* plugins/paint/arrows/gchempaint-arrows.schemas.in: ditto.
* plugins/paint/templates/Makefile.am: fixed typo.
2007-04-01 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: copy remaining plugins for GChemPaint.
* plugins/paint/*: ditto.
2007-04-01 Jean Bréfort <jean.brefort@normalesup.org>
* plugins/paint/selection/Makefile.am: fixed details.
* plugins/paint/selection/groupdlg.cc: fixed glade dir.
2007-03-31 Jean Bréfort <jean.brefort@normalesup.org>
* Makefile.am: add gchempaint stuff.
* configure.ac: ditto.
* docs/help/table/C/gchemtable-unstable.xml: fixed typos.
* glade/Makefile.am: add gchempaint stuff.
* glade/table/curve.glade: add printing.
* libs/Makefile.am: add gchempaint stuff.
* programs/Makefile.am: ditto.
* programs/table/gchemtable-app.cc: add an OnAbout method to the class.
* programs/table/gchemtable-app.h: ditto.
* programs/table/gchemtable-curve.cc: add a menu and implement printing.
* programs/table/gchemtable-curve.h: ditto.
2007-03-30 Jean Bréfort <jean.brefort@normalesup.org>
* glade/paint/*: copied from GChemPaint.
* libs/canvas/*: ditto.
* libs/gcp/*: ditto.
* plugins/Makefile.am: new directory Makefile.am.
* plugins/paint/Makefile.am: ditto.
* plugins/paint/selection/*: copied from GChemPaint.
* programs/paint/*: ditto.
2007-03-09 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: make things build again.
* libs/gcu/Makefile.am: ditto.
* mozilla-plugin/Makefile.am: ditto.
* programs/3d/Makefile.am: ditto.
* programs/calc/Makefile.am: ditto.
2007-03-09 Jean Bréfort <jean.brefort@normalesup.org>
* Makefile.am: updated to new architecture.
* configure.ac: ditto.
* docs/reference/Doxyfile.in: ditto.
* libs/Makefile.am: new file.
* programs/3d/Makefile.am: updated to new architecture.
* programs/calc/Makefile.am: ditto.
* programs/crystal/Makefile.am: ditto.
* programs/table/Makefile.am: ditto.
2007-03-09 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/*: moved to libs/gcu.
* libs/gcu/*: moved from gcu.
2007-03-01 Jean Bréfort <jean.brefort@normalesup.org>
* programs/3d/window.cc: updated copyright in about box.
* programs/calc/gchemcalc.cc: ditto.
* programs/crystal/window.cc: ditto.
* programs/table/gchemtable-app.cc: ditto.
2007-02-25 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/crystal/C/gcrystal-unstable.xml: updated history.
* programs/3d/main.cc: calls gtk_gl_init.
* programs/crystal/main.cc: ditto.
2007-02-22 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post branching version bump (0.9.0).
2007-02-21 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/crystal/C/gcrystal-unstable.xml: make it
conform to the schema.
* docs/help/table/C/gchemtable-unstable.xml: ditto.
2007-02-21 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/table/C/figures/curve.png: new screenshot.
* docs/help/table/C/figures/elec.png: ditto.
* docs/help/table/C/figures/family.png: ditto.
* docs/help/table/C/figures/main.png: ditto.
* docs/help/table/C/figures/radii.png: ditto.
* docs/help/table/C/figures/start.png: ditto.
* docs/help/table/C/figures/state.png: ditto.
* docs/help/table/C/figures/thermo.png: ditto.
* docs/help/table/C/gchemtable-unstable.xml: written.
* gcu/gtkchem3dviewer.cc: copyright update.
* glade/table/eltpage.glade: minor UI enhancement.
* programs/table/gchemtable-elt.cc: ditto.
2007-02-18 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/gtkchem3dviewer.cc: use a pointer to Chem3dDoc to ensure
the constructor call and add a finalize method to clean. [#19077]
2007-02-16 Jean Bréfort <jean.brefort@normalesup.org>
* TODO: updated.
* configure.ac: requires openbabel-2.1, chemical-mme-data
0.1.94 and bodr 5.
* gcu/crystaldoc.cc: include gi18n-lib.h.
* gcu/element.cc: remove ifdef BODR.
* gcu/element.h: ditto.
* glade/table/Makefile.am: add new glade file (Jordan Mantha).
* glade/table/family.glade: new glade file (Jordan).
* programs/table/gchemtable-app.cc: new family legend (Jordan).
* programs/table/gchemtable-app.h: ditto.
* programs/table/gchemtable-elt.cc: remove ifdef BODR.
2007-02-12 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/application.cc: fix contextual help tags.
* gcu/application.h: ditto.
2007-02-11 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/crystal/C/figures/atoms-dlg.png: new screenshot.
* docs/help/crystal/C/figures/cleavages-dlg.png: ditto.
* docs/help/crystal/C/figures/default-view.png: ditto.
* docs/help/crystal/C/figures/lattice-dlg.png: ditto.
* docs/help/crystal/C/figures/lines-dlg.png: ditto.
* docs/help/crystal/C/figures/print-res.png: ditto.
* docs/help/crystal/C/figures/size-dlg.png: ditto.
* docs/help/crystal/C/figures/view-settings.png: ditto.
* docs/help/crystal/C/gcrystal-unstable.xml: updated
Gnome Crystal documentation.
* programs/crystal/prefs.cc: make print resolution
insensitive when needed on dialog creation.
2007-02-07 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/dialog-owner.cc: fix some issues.
* gcu/dialog.h: add Dialog::Present.
* programs/table/gchemtable-app.cc: don't display acidity
color scheme in menu.
2007-02-06 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: needs goffice-0.3.6.
* gcu/Makefile.am: add dialog-owner.*.
* gcu/application.cc: derives from DialogOwner.
* gcu/application.h: ditto.
* gcu/chem3ddoc.cc: update copyright.
* gcu/chem3ddoc.h: ditto.
* gcu/dialog.cc: use new DialogOwner class.
* gcu/dialog.h: ditto.
* gcu/dialog-owner.cc: new DialogOwner class used to ensure the
uniqueness of some dialogs.
* gcu/dialog-owner.h: ditto.
* gcu/document.cc: derives from DialogOwner.
* gcu/document.h: ditto.
* gcu/filechooser.cc: update copyright.
* gcu/filechooser.h: ditto.
* gcu/formula.cc: ditto.
* gcu/object.cc: ditto.
* programs/calc/gchemcalc.cc: update to new goffice api.
* programs/crystal/application.cc: derives from DialogOwner.
* programs/crystal/application.h: ditto.
* programs/crystal/atomsdlg.cc: make it unique for a document.
* programs/crystal/celldlg.cc: ditto.
* programs/crystal/cleavagesdlg.cc: ditto.
* programs/crystal/document.cc: derives from DialogOwner.
* programs/crystal/document.h: ditto.
* programs/crystal/linesdlg.cc: make it unique for a document.
* programs/crystal/prefs.cc: make it unique for the application.
* programs/crystal/sizedlg.cc: make it unique for a document.
* programs/crystal/view-settings.cc: make it unique for a view.
* programs/crystal/view.cc: derives from DialogOwner.
* programs/crystal/view.h: ditto.
* programs/crystal/window.cc: update copyright.
* programs/crystal/window.h: ditto.
* programs/table/gchemtable-curve.cc: update to new goffice api.
2007-01-22 Jean Bréfort <jean.brefort@normalesup.org>
* programs/crystal/atomsdlg.cc: fixed a few memory leaks.
* programs/crystal/cleavagesdlg.cc: ditto.
* programs/crystal/document.cc: fix read only issue.
* programs/crystal/linesdlg.cc: use correct line number when clicking
the "unique" box and fix some leaks.
2007-01-21 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/crystal/C/gcrystal-unstable.xml: write some doc.
* docs/help/crystal/C/figures/main-window.png: new screenshot.
* gcu/object.cc: implement a default behavior for Object::Add.
* programs/crystal/application.cc: disable saving for read-only files.
* programs/crystal/document.cc: ditto.
* programs/crystal/document.h: ditto.
* programs/crystal/window.cc: ditto.
* programs/crystal/window.h: ditto.
2007-01-14 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/calc/C/gchemcalc-unstable.xml: completed.
* gcu/formula.cc: fixed a crasher when parsing an empty string.
2007-01-13 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/calc/C/figures/braces.png: new screenshot.
* docs/help/calc/C/figures/composition.png: ditto.
* docs/help/calc/C/figures/formula.png: ditto.
* docs/help/calc/C/figures/pattern.png: ditto.
* docs/help/calc/C/figures/start.png: ditto.
2007-01-06 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/3d/gchem3d-viewer-unstable.omf.in: removed Education from
categories, so that yelp lists it in Other docs instead of nowhere.
* docs/help/calc/gchemcalc-unstable.omf.in: ditto.
* docs/help/crystal/gcrystal-unstable.omf.in: ditto.
* docs/help/table/gchemtable-unstable.omf.in: ditto.
* docs/help/crystal/C/gcrystal-unstable.xml: typos.
2007-01-05 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/3d/C/gchem3d-viewer-unstable.xml: completed.
* programs/crystal/window.cc: fixed a tip.
2007-01-03 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/chem3ddoc.cc: don't use deprecated Openbabel api.
* gcu/chem3ddoc.h: ditto.
* gcu/filechooser.cc: change list<char*> to list<string> for mime types.
* gcu/filechooser.h: ditto.
* programs/3d/application.cc: update for filechooser changes.
* programs/crystal/application.cc: ditto.
* programs/crystal/document.cc: ditto.
2007-01-01 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/3d/C/gchem3d-viewer-unstable.xml: more work on help.
2006-12-31 Jean Bréfort <jean.brefort@normalesup.org>
* docs/help/3d/C/figures/main-window.png: new screenshot.
* docs/help/3d/C/gchem3d-viewer-unstable.xml: pass make check.
* docs/help/calc/C/gchemcalc-unstable.xml: ditto.
* docs/help/table/C/gchemtable-unstable.xml: ditto.
* programs/3d/window.cc: slightly graw window default size.
2006-12-28 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/gtkchem3dviewer.cc: cleaned code.
* gcu/gtkchem3dviewer.h: ditto and updated API docs.
* gcu/gtkcomboperiodic.h: updated API docs.
* gcu/gtkcrystalviewer.cc: cleaned code.
* gcu/gtkcrystalviewer.h: ditto and updated API docs.
* gcu/gtkperiodic.h: updated API docs.
* gcu/object.h: ditto.
* tests/testgtkchem3dviewer.c: cleaned code and updated API docs.
* tests/testgtkcrystalviewer.c: ditto.
* tests/testgtkperiodic.c: ditto.
2006-12-27 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/gtkperiodic.c: cleaned code.
* gcu/gtkperiodic.h: ditto and updated API docs.
* tests/testgtkperiodic.c: ditto.
2006-12-26 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/crystalatom.h: updated API docs.
* gcu/crystalcleavage.h: ditto.
* gcu/crystalline.h: ditto.
* gcu/macros.h: ditto.
* gcu/object.h: ditto.
2006-12-25 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/dialog.h: updated API docs and made some members private.
* gcu/filechooser.h: updated API docs.
2006-12-24 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/application.h: fixed typos in docs
* gcu/chem3ddoc.cc: update m_Empty after loading.
* gcu/crystaldoc.cc: use m_Emty instead of deprecated SetEmpty().
* gcu/document.h: updated API docs.
* gcu/filechooser.h: ditto.
* gcu/formula.h: minot update.
* gcu/gldocument.h: updated API docs.
2006-12-23 Jean Bréfort <jean.brefort@normalesup.org>
* docs/reference/Doxyfile.in: updated options.
* gcu/application.h: updated API docs.
* gcu/chem3ddoc.h: ditto.
* gcu/chemistry.h: ditto.
* gcu/glview.h: ditto.
* gcu/gtkchem3dviewer.h: ditto.
* gcu/value.cc: enhanced implementation of LocalizedString class.
* gcu/value.h: updated API docs.
2006-12-22 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/application.cc: use help uris instead of filenames.
* gcu/macros.h: fixed GCU_GCONF_GET macro.
* gcu/matrix.h: fixed typo in documentation.
* programs/calc/gchemcalc.cc: don't crash on atrtup when a formula is
provided on the command line.
2006-12-12 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: add new help directories.
* docs/help/3d/C/gchem3d-viewer-unstable.xml: new help related file.
* docs/help/3d/C/legal.xml: ditto.
* docs/help/3d/Makefile.am: ditto.
* docs/help/3d/gchem3d-viewer-unstable.omf.in: ditto.
* docs/help/Makefile.am: ditto.
* docs/help/calc/C/gchemcalc-unstable.xml: ditto.
* docs/help/calc/C/legal.xml: ditto.
* docs/help/calc/Makefile.am: ditto.
* docs/help/calc/gchemcalc-unstable.omf.in: ditto.
* docs/help/table/C/gchemtable-unstable.xml: ditto.
* docs/help/table/C/legal.xml: ditto.
* docs/help/table/Makefile.am: ditto.
* docs/help/table/gchemtable-unstable.omf.in: ditto.
* gcu/application.cc: fixed help paths (yelp seems to not support
filenames anymore, just uris).
* programs/3d/application.cc: populate help menu.
* programs/3d/window.cc: ditto.
* programs/calc/Makefile.am: ditto.
* programs/calc/gchemcalc.cc: ditto.
* programs/table/gchemtable-app.cc: ditto.
* programs/table/gchemtable-main.cc: ditto.
2006-12-07 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/crystaldoc.cc: save the FixedSize flag.
* programs/crystal/application.cc: set windows names after saving.
2006-12-06 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/application.h: cleaned code and wrote more documentation.
* gcu/crystaldoc.cc: fix various gcrystal issues.
* gcu/crystaldoc.h: ditto.
* gcu/crystalview.cc: ditto.
* gcu/document.cc: ditto.
* gcu/document.h: ditto.
* gcu/glview.cc: ditto.
* gcu/gtkcrystalviewer.cc: ditto.
* programs/crystal/application.cc: ditto.
* programs/crystal/atomsdlg.cc: ditto.
* programs/crystal/celldlg.cc: ditto.
* programs/crystal/cleavagesdlg.cc: ditto.
* programs/crystal/document.cc: ditto.
* programs/crystal/document.h: ditto.
* programs/crystal/linesdlg.cc: ditto.
* programs/crystal/prefs.cc: ditto.
* programs/crystal/sizedlg.cc: ditto.
* programs/crystal/view-settings.cc: ditto.
* programs/crystal/view.cc: ditto.
* programs/crystal/view.h: ditto.
* programs/crystal/window.cc: ditto.
* programs/crystal/window.h: ditto.
2006-12-03 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/atom.cc: don't crash when saving dummy atoms.
2006-11-30 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/application.cc: add a new method and corresponding data for
changing size of saved images (instead of changing resolution).
* gcu/application.h: ditto.
* gcu/glview.cc: save image to pixbuf with user defined width and height.
* gcu/glview.h: ditto.
* glade/Makefile.am: add new glade file.
* glade/image-size.glade: new glade file.
* programs/3d/application.cc: save image to pixbuf with user defined
width and height.
* programs/crystal/application.cc: ditto.
* programs/crystal/document.cc: ditto.
2006-11-28 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/gtkcrystalviewer.cc: force update of the view after loading.
* mozilla-plugin/chem-viewer.cc: add support for Gnome Crystal files.
* mozilla-plugin/moz-plugin.c: (NP_GetMIMEDescription): ditto.
2006-11-27 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump.
2006-11-26 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac:don't echo an extra "no" when mozilla is not detected.
* mozilla-plugin/Makefile.am: include top_srcdir.
2006-11-26 Jean Bréfort <jean.brefort@normalesup.org> (for Jordan Mantha)
* glade/table/Makefile.am: added a new glade file.
* glade/table/acidity.glade: legend for acidity property.
* programs/table/gchemtable-app.cc: show the new legend.
2006-11-25 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/element.cc: Element::GetIntegerProperty returns GCU_ERROR
for unknown properties instead of 0.
* gcu/element.h: ditto.
* programs/table/gchemtable-app.cc: ditto.
2006-11-24 Jean Bréfort <jean.brefort@normalesup.org> (for Jordan Mantha)
* programs/table/gchemtable-app.cc: initial work on new color schemes
(family and acidity).
* programs/table/gchemtable-app.h: ditto.
2006-11-16 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/chem3ddoc.cc: don't crash on invalid atoms, just remove them.
2006-11-15 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/filechooser.cc: choose the default mime type if the mime type
can't be determined.
* programs/crystal/application.cc: rewrote save as image code to make
it consistent with 3d viewer and gchempaint.
* programs/crystal/application.h: ditto.
* programs/crystal/document.cc: ditto.
* programs/crystal/document.h: ditto.
* programs/crystal/window.cc: ditto.
2006-11-14 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/application.cc: add image mime types support.
* gcu/application.h: ditto.
* gcu/chem3ddoc.cc: use a c++ string instead of char* for filename in
Chem3dDoc::OnExportVrml.
* gcu/chem3ddoc.h: ditto.
* gcu/filechooser.cc: add mime type to the combo box if no description
is available.
* gcu/glview.cc: use a c++ string instead of char* for filename in
GLView::SaveAsImage.
* gcu/glview.h: ditto.
* programs/3d/application.cc: use new image mime type support in
gcu::Application.
2006-11-13 Jean Bréfort <jean.brefort@normalesup.org>
* TODO: updated to current state.
* gcu/chem3ddoc.cc: export vrml now works.
* programs/3d/application.cc: add model/vrml to mime types for save
as image.
2006-11-12 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/chem3ddoc.cc: started work on vrml export.
* gcu/chem3ddoc.h: ditto.
* gcu/glview.h: ditto.
* programs/3d/application.cc: enhanced image export.
* programs/crystal/application.cc: fix on emore instance of the
vrml mime type.
2006-11-11 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/filechooser.cc: show mime type list even if an extra widget is
added and detect mime type for non existant files.
* gcu/gtkperiodic.c: (gtk_periodic_finalize): replace deprecated
gtk_object_sink.
* programs/3d/application.cc: initial support for image export.
* programs/3d/application.h: ditto.
* programs/3d/window.cc: ditto.
* programs/crystal/application.cc: fix vrml mime type.
2006-11-08 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/application.cc: add support for abitrary resolution image export.
* gcu/application.h: ditto.
* gcu/filechooser.cc: add an optional extra widget.
* gcu/filechooser.h: ditto.
* glade/Makefile.am: new glade file added.
* glade/image-resolution.glade: ditto.
* programs/crystal/application.cc: export images with arbitrary resolution.
* programs/crystal/document.cc: ditto.
2006-10-31 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/application.cc: do not crash on startup when the LANG environment
variable is not set. [see GChemPaint bug #18159]
2006-10-24 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/gtkperiodic.c: (gtk_periodic_set_property): always show the correct
notebook page when changing color scheme.
2006-10-19 Jean Bréfort <jean.brefort@normalesup.org>
* programs/crystal/application.cc: add recent files support to gcrystal.
* programs/crystal/window.cc: ditto.
* programs/crystal/window.h: ditto.
2006-10-18 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/element.cc: support more bodr data.
* gcu/element.h: ditto.
* gcu/glview.cc: export image at any resolution.
* programs/3d/window.cc: add a filter to the recent files list so
that only supported files are listed.
2006-10-15 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: needs gtk+ >= 2.10.0.
* gcu/application.cc: add a GtkRecentManager member.
* gcu/application.h: ditto.
* programs/3d/application.cc: implement recent files for the 3d viewer.
* programs/3d/window.cc: ditto.
2006-10-04 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/application.cc: add screen resolution detection (assuming vertical
and horizontal resolution are the same).
* gcu/application.h: ditto.
* programs/calc/gchemcalc.cc: removed obsolete headers.
* programs/table/gchemtable-curve.cc: ditto.
2006-09-24 Daniel Leidert <daniel.leidert.spam@gmx.net>
* gcu/Makefile.am: Fixed automake warning.
* programs/3d/window.cc (on_about, on_about_activate_url): Just some
cleanup and improvements. Added "clickable" Homepage URL.
(entries[]): Fixed print and added about icon.
* programs/table/gchemtable-app.cc (on_about, on_about_activate_url)
(entries[]): Ditto.
* programs/calc/gchemcalc.cc (on_about, on_about_activate_url)
(entries[]): Ditto.
(cb_print_version): Fixed string.
(main): Improved usage output.
2006-09-24 Daniel Leidert <daniel.leidert.spam@gmx.net>
* configure.ac (MP_*): Replaced by GCU_* macros.
* AUTHORS: Updated information.
* README: Added a note about the applications for manpage processing.
* acinclude.m4: Updated. All macros have been renamed to GCU_* instead
of MP_*.
(MP_PROG_XMLLINT): Added check, if PKG_CHECK_EXISTS macro is
available. Removed `echo' usage by using AC_MSG_* macros.
(MP_PROG_XSLTPROC): Make xsltproc optional, so users don't need a
local installation. Likewise for `echo' usage.
(MP_PROG_MAN): Likewise.
* docs/man/Makefile.am (man1_MANS, man3_MANS): Made xsltproc optional.
(check-local): Cosmetic fixes.
2006-09-24 Jean Bréfort <jean.brefort@normalesup.org>
* programs/crystal/window.cc: fixed typo in menus. [#17832].
2006-09-23 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/crystaldoc.cc: close message box when button is clicked. [#17830].
2006-09-23 Jean Bréfort <jean.brefort@normalesup.org>
* programs/table/gchemtable-app.cc: make things compile without bodr.
2006-09-23 Jean Bréfort <jean.brefort@normalesup.org>
* programs/crystal/application.cc: include gi18n.h.
* programs/crystal/atomsdlg.cc: ditto.
* programs/crystal/celldlg.cc: ditto.
* programs/crystal/cleavagesdlg.cc: ditto.
* programs/crystal/document.cc: ditto.
* programs/crystal/linesdlg.cc: ditto.
* programs/crystal/main.cc: ditto.
* programs/crystal/window.cc: ditto.
* programs/crystal/document.h: remove bonobo.h.
2006-09-21 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/crystaldoc.cc: make GCrystal use GLView and GLDocument classes,
and allow for orthogonal projection (FoV == 0).
* gcu/crystaldoc.h: ditto.
* gcu/crystalview.cc: ditto.
* gcu/crystalview.h: ditto.
* gcu/document.h: ditto.
* gcu/glview.cc: ditto.
* gcu/glview.h: ditto.
* gcu/gtkcrystalviewer.cc: ditto.
* gcu/macros.h: ditto.
* glade/crystal/prefs.glade: ditto.
* glade/crystal/view-settings.glade: ditto.
* programs/crystal/application.cc: ditto.
* programs/crystal/document.cc: ditto.
* programs/crystal/document.h: ditto.
* programs/crystal/view-settings.cc: ditto.
* programs/crystal/view.cc: ditto.
* programs/crystal/view.h: ditto.
* programs/crystal/window.cc: ditto.
2006-09-11 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/gtkperiodic.c: made gtk_periodic_set_colors public.
* gcu/gtkperiodic.h: ditto.
* glade/table/state-thermometer.glade: fixed some issues.
* programs/table/gchemtable-app.cc: implemented colors by physical state.
* programs/table/gchemtable-app.h: ditto.
2006-09-10 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: add glade/table/Makefile to AC_OUTPUT.
* gcu/gtkperiodic.c: fixed new color scheme mechanism.
* gcu/gtkperiodic.h: ditto.
* glade/Makefile.am: removed moved files.
* glade/gtkperiodic.glade: cleaned.
* glade/table/state-thermometer.glade: updated max so that we can
reach 4000K.
* programs/table/Makefile.am: define GLADEDIR.
* programs/table/gchemtable-app.cc: start working on physical state related
color scheme.
* programs/table/gchemtable-app.h: ditto.
2006-09-08 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/Makefile.am: define GLADEDIR.
* gcu/gtkperiodic.c: (gtk_periodic_init): initaialize a new notebook.
* glade/Makefile.am: add table subdir and move two glade files to it.
* glade/curve.glade: moved to table subdir.
* glade/eltpage.glade: ditto.
* glade/gtkperiodic.glade: add a notebook to allow for extra widgets.
* glade/table/Makefile.am: new directory.
* glade/table/curve.glade: moved from parent directory.
* glade/table/eltpage.glade: ditto.
* glade/table/state-thermometer.glade: new thermometer for physical
state.
2006-09-08 Jean Bréfort <jean.brefort@normalesup.org>
* programs/3d/document.cc: fixed typo.
2006-09-05 Jean Bréfort <jean.brefort@normalesup.org>
* programs/3d/document.cc: use last loaded file directory as current.
* programs/crystal/document.cc: ditto.
2006-09-02 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/xml-utils.cc:updated copyright years.
* gcu/xml-utils.h: ditto.
* programs/3d/main.cc: initialize libgoffice (for translation).
2006-09-02 Jean Bréfort <jean.brefort@normalesup.org>
* docs/Makefile.am: add man subdir.
* docs/help/Makefile.am: add MAINTAINERCLEANFILES.
* docs/help/crystal/Makefile.am: ditto.
* docs/reference/Makefile.am: ditto.
* glade/crystal/Makefile.am: ditto.
* pixmaps/Makefile.am: ditto.
* samples/Makefile.am: ditto.
2006-09-02 Jean Bréfort <jean.brefort@normalesup.org>
* Makefile.am: fixed paths and other build issues.
* acinclude.m4: new file from Daniel.
* configure.ac: fixed paths and other build issues.
* database/Makefile.am: ditto.
* dtds/Makefile.am: ditto.
* gcu/Makefile.am: ditto.
* gcu/chemistry.h: make scale a const char* in GcuElectronegativity.
* gcu/element.cc: ditto.
* gcu/xml-utils.cc: add new function GetStaticScale.
* gcu/xml-utils.h: ditto.
* glade/Makefile.am: fixed paths and other build issues.
* mozilla-plugin/Makefile.am: ditto.
* mozilla-plugin/moz-plugin.c: ditto.
* programs/3d/Makefile.am: ditto.
* programs/3d/main.cc: ditto.
* programs/calc/Makefile.am: ditto.
* programs/calc/gchemcalc.cc: ditto.
* programs/crystal/Makefile.am: ditto.
* programs/crystal/application.cc: ditto.
* programs/crystal/atomsdlg.cc: ditto.
* programs/crystal/celldlg.cc: ditto.
* programs/crystal/cleavagesdlg.cc: ditto.
* programs/crystal/linesdlg.cc: ditto.
* programs/crystal/main.cc: ditto.
* programs/crystal/prefs.cc: ditto.
* programs/crystal/sizedlg.cc: ditto.
* programs/crystal/view-settings.cc: ditto.
* programs/table/Makefile.am: ditto.
* programs/table/gchemtable-curve.cc: ditto.
* programs/table/gchemtable-elt.cc: ditto.
* programs/table/gchemtable-main.cc: ditto.
* tests/Makefile.am: ditto.
* tests/testgtkchem3dviewer.c: (main): ditto.
* tests/testgtkcrystalviewer.c: (main): ditto.
2006-09-02 Jean Bréfort <jean.brefort@normalesup.org>
* docs/man/Makefile.am: imported Daniel's work in HEAD.
* docs/man/gchem3d-viewer.1: ditto.
* docs/man/gchem3d-viewer.1.xml: ditto.
* docs/man/gchemcalc.1: ditto.
* docs/man/gchemcalc.1.xml: ditto.
* docs/man/gchemtable.1: ditto.
* docs/man/gchemtable.1.xml: ditto.
* docs/man/gcu_entities.dtd.in: ditto.
* docs/man/libgcu.3: ditto.
* docs/man/libgcu.3.xml: ditto.
2006-09-01 Jean Bréfort <jean.brefort@normalesup.org>
* NEWS: add some news.
* configure.ac: post release version bump (0.7.4).
* gcu/chemistry.h: make radius scale a const char* (fixes a major bug
in gcrystal).
* gcu/crystalatom.cc: ditto.
* gcu/element.cc: ditto.
* gcu/xml-utils.cc: ditto.
* gcu/crystaldoc.cc: minor typographic fix.
* programs/crystal/document.cc: ditto.
2006-08-14 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: remove debug extra line.
* gcu/Makefile.am: add value.*.
* gcu/element.cc: add support for bodr data.
* gcu/element.h: ditto.
* gcu/value.cc: new classes to support bodr.
* gcu/value.h: ditto.
* glade/eltpage.glade: add thermodynamic properties page.
* programs/table/gchemtable-curve.cc: add boiling and melting points curves.
* programs/table/gchemtable-elt.cc: add boiling and melting points.
2006-08-12 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: optionaly needs bodr >= 4.
* gcu/element.cc: started work on loading bodr data.
* gcu/element.h: ditto.
* gcu/macros.h: add some gconf related macros.
* programs/crystal/main.cc: use the new gconf macros.
2006-06-29 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: double eval datadir for GNU autoconf >= 2.59c
* gcu/Makefile.am: removed extra header files.
* gcu/chem3ddoc.cc: don't include window.h.
* gcu/filechooser.cc: don't show filter name.
2006-06-20 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/application.h: don't systematically quit when there are no more
open documents.
2006-06-19 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/chem3ddoc.cc: add LoadData method.
* gcu/chem3ddoc.h: ditoo.
* gcu/gtkchem3dviewer.cc: use the Chem3dDoc class;
* gcu/gtkchem3dviewer.h: ditto.
* mozilla-plugin/chem-viewer.cc: include gcu/chem3ddoc.h for Display2DMode
declaration.
2006-06-18 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: requires bodr-3.
* gcu/Makefile.am: add new files.
* gcu/application.h: add a documents set.
* gcu/chem3ddoc.cc: new document class for the 3d viewer.
* gcu/chem3ddoc.h: ditto.
* gcu/crystalview.h: fixed typo.
* gcu/document.cc: add an appication member.
* gcu/document.h: ditto.
* gcu/filechooser.cc: fixed various bugs.
* gcu/gldocument.cc: new document class for 3d scenes.
* gcu/gldocument.h: ditto.
* gcu/glview.cc: new view class for 3d scenes.
* gcu/glview.h: ditto.
* gcu/macros.h: some useful macros (might break doxygen docs generation).
* programs/3d/Makefile.am: changed files lists.
* programs/3d/application.cc: new application class.
* programs/3d/application.h: ditto.
* programs/3d/document.cc: new document class.
* programs/3d/document.h: ditto.
* programs/3d/gchem3d-viewer.c: removed obsolete file.
* programs/3d/main.cc: new viewer implemntation.
* programs/3d/view.cc: new view class.
* programs/3d/view.h: ditto.
* programs/3d/window.cc: new window class.
* programs/3d/window.h: ditto.
2006-06-02 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: changed version to 0.7.3.
* gcu/application.cc: add some new helper methods.
* gcu/application.h: ditto.
* gcu/element.cc: fixed a compilation warning.
* gcu/filechooser.cc: fixed another one.
* programs/crystal/application.cc: removed methods moved
to gcu::Application.
* programs/crystal/application.h: ditto.
* programs/crystal/window.cc: removed Close and Quit buttons from toolbar.
2006-05-28 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/crystalview.cc: fix a data size issue [#16680].
2006-05-27 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: fixed mozilla-config use (thanks to Pav Lucistnik).
* programs/crystal/window.cc: made on_delete_event static.
2006-05-21 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.7.2).
2006-05-16 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: port to new LINGUAS framework.
* po/LINGUAS: new file.
* programs/crystal/gcrystal.schemas.in: removed obsolete TabPos.
2006-05-11 Jean Bréfort <jean.brefort@normalesup.org>
* glade/crystal/prefs.glade: removed obsolete MDI page.
* programs/crystal/application.cc: Add OnQuit and remove several obsolete
methods.
* programs/crystal/application.h: ditto.
* programs/crystal/globals.h: removed obsolete TabPos variable.
* programs/crystal/main.cc: cleaned code.
* programs/crystal/prefs.cc: removed obsolete MDI page.
* programs/crystal/prefs.h: ditto.
* programs/crystal/window.cc: fixed on_quit and implemetn on_view_settings.
2006-05-10 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: add a value for PACKAGE_BUGREPORT.
* programs/crystal/application.cc: rewrote gcApplication::OnFileClose
* programs/crystal/document.cc: add gcDocument::RemoveAllViews.
* programs/crystal/document.h: ditto.
* programs/crystal/view.cc: removed the obsolete Lock stuff.
* programs/crystal/view.h: ditto.
* programs/crystal/window.cc: reorder the Help menu.
2006-05-09 Jean Bréfort <jean.brefort@normalesup.org>
* programs/crystal/application.cc: add a comment.
* programs/crystal/document.cc: reimplement add/remove views.
* programs/crystal/document.h: ditto.
* programs/crystal/window.cc: ditto.
* programs/crystal/window.h: ditto.
2006-05-08 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: needs goffice >= 0.3.1.
* programs/crystal/application.cc: reimplemented printing.
* programs/crystal/document.h: ditto.
* programs/crystal/view.cc: ditto.
2006-05-07 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/crystalview.cc: add CrystalView::SaveAsImage.
* gcu/crystalview.h: ditto.
* programs/crystal/application.cc: reimplemented image export.
* programs/crystal/document.cc: add gcDocumentSaveAsImage.
* programs/crystal/document.h: ditto.
* programs/crystal/main.cc: call gnome_vfs_shutdown on exit.
* programs/crystal/view.cc: removed obsolete gcView::OnExportPNG and
gcView::OnExportJPEG.
* programs/crystal/view.h:
2006-05-06 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: add a check for <sstream>.
* gcu/application.h: changed FileProcess signature to add a mime type.
* gcu/crystaldoc.cc: use xmlDocSetRootElement instead of =.
* gcu/filechooser.cc: add a combo box for supported mime type and pass
the mime type to Application::FileProcess.
* programs/crystal/application.cc: update FileProcess to support the mime
type and add vrml export support there.
* programs/crystal/application.h: changed FileProcess signature.
* programs/crystal/document.cc: export VRML using gnome-vfs.
* programs/crystal/document.h: change signature for OnExportVRML.
* programs/crystal/main.cc: use new signature of Application::FileProcess.
* programs/crystal/window.cc: implement export VRML.
* programs/crystal/window.h: add an inline method to get the associated
view.
2006-05-04 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: add c++ headers tests for gcrystal.
* gcu/application.cc: enhanced Application startup in constructor.
* gcu/application.h: ditto.
* glade/crystal/lines.glade: replaced last GnomeColorPicker instances.
* programs/crystal/Makefile.am: add window.*.
* programs/crystal/application.cc: start work on new ui (one view per window).
* programs/crystal/application.h: ditto.
* programs/crystal/cleavagesdlg.cc: fixed glade file path.
* programs/crystal/document.cc: start work on new ui.
* programs/crystal/document.h: ditto.
* programs/crystal/linesdlg.cc: fixed color buttons names.
* programs/crystal/main.cc: start work on new ui.
* programs/crystal/prefs.cc: ditto.
* programs/crystal/view-settings.cc: ditto.
* programs/crystal/view.cc: ditto.
* programs/crystal/view.h: ditto.
* programs/crystal/window.cc: ditto.
* programs/crystal/window.h: ditto.
2006-02-28 Jean Bréfort <jean.brefort@normalesup.org>
* database/elements.xml.in: fixed bromine molar weight.
2006-02-27 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: post release version bump (0.7.1).
2006-02-27 Jean Bréfort <jean.brefort@normalesup.org>
* Makefile.am: fixed make distcheck and pushed some
cleaning by Daniel.
2006-02-27 Jean Bréfort <jean.brefort@normalesup.org>
* COPYING-DOCS: add missing file.
* Makefile.am: add --with-mozilla-libdir to DISCHECK_CONFIGURE_FLAGS.
* configure.ac: add --with-mozilla-libdir option and pushed some
cleaning by Daniel.
* docs/help/crystal/gcrystal-unstable.omf.in: make it conform to the dtd.
* programs/crystal/Makefile.am: add gcrystal.schemas to CLEANFILES.
* programs/crystal/gcrystal.schemas.in: add missing file.
2006-02-26 Jean Bréfort <jean.brefort@normalesup.org>
* Makefile.am: add pixmaps subdir.
* configure.ac: ditto.
* gcu/gtkcomboperiodic.h: fixed documentation typo.
* pixmaps/Makefile.am: new pixmaps.
* pixmaps/gcrystal128.png: ditto.
* pixmaps/gcrystal32.png: ditto.
* pixmaps/gcrystal48.png: ditto.
* pixmaps/gcrystal72.png: ditto.
* pixmaps/gcrystal_logo.png: ditto.
2006-02-25 Jean Bréfort <jean.brefort@normalesup.org>
* Makefile.am: add Gnome Crystal stuff.
* README: ditto.
* autogen.sh: add gnome-docs-utils initialization.
* configure.ac: add new directories.
* docs/Makefile.am: add Gnome Crystal stuff.
* docs/help/Makefile.am: ditto.
* docs/help/crystal/C/gcrystal-unstable.xml: ditto.
* docs/help/crystal/C/gcrystal.xml: ditto.
* docs/help/crystal/C/legal.xml: ditto.
* docs/help/crystal/Makefile.am: ditto.
* docs/help/crystal/gcrystal-unstable.omf.in: ditto.
* gchemutils.xml.in: ditto.
* gcu/application.cc: fixed license.
* gcu/application.h: ditto.
* gcu/atom.cc: ditto.
* gcu/atom.h: ditto.
* gcu/bond.cc: ditto.
* gcu/bond.h: ditto.
* gcu/chemistry.cc: ditto.
* gcu/chemistry.h: ditto.
* gcu/crystalatom.cc: ditto.
* gcu/crystalatom.h: ditto.
* gcu/crystalbond.cc: ditto.
* gcu/crystalbond.h: ditto.
* gcu/crystalcleavage.cc: ditto.
* gcu/crystalcleavage.h: ditto.
* gcu/crystaldoc.cc: ditto.
* gcu/crystaldoc.h: ditto.
* gcu/crystalline.cc: ditto.
* gcu/crystalline.h: ditto.
* gcu/crystalview.cc: ditto.
* gcu/crystalview.h: ditto.
* gcu/dialog.cc: ditto.
* gcu/dialog.h: ditto.
* gcu/document.cc: ditto.
* gcu/document.h: ditto.
* gcu/element.cc: ditto.
* gcu/element.h: ditto.
* gcu/filechooser.cc: ditto.
* gcu/filechooser.h: ditto.
* gcu/formula.cc: ditto.
* gcu/formula.h: ditto.
* gcu/gtkchem3dviewer.cc: ditto.
* gcu/gtkchem3dviewer.h: ditto.
* gcu/gtkcomboperiodic.c: ditto.
* gcu/gtkcomboperiodic.h: ditto.
* gcu/gtkcrystalviewer.cc: ditto.
* gcu/gtkcrystalviewer.h: ditto.
* gcu/gtkperiodic.c: ditto.
* gcu/gtkperiodic.h: ditto.
* gcu/isotope.cc: ditto.
* gcu/isotope.h: ditto.
* gcu/matrix.cc: ditto.
* gcu/matrix.h: ditto.
* gcu/matrix2d.cc: ditto.
* gcu/matrix2d.h: ditto.
* gcu/object.cc: ditto.
* gcu/object.h: ditto.
* gcu/xml-utils.cc: ditto.
* gcu/xml-utils.h: ditto.
* glade/Makefile.am: ditto.
* glade/crystal/Makefile.am: add Gnome Crystal stuff.
* glade/crystal/atoms.glade: ditto.
* glade/crystal/bonds.glade: ditto.
* glade/crystal/cell.glade: ditto.
* glade/crystal/cleavages.glade: ditto.
* glade/crystal/docprop.glade: ditto.
* glade/crystal/lines.glade: ditto.
* glade/crystal/prefs.glade: ditto.
* glade/crystal/size.glade: ditto.
* glade/crystal/view-settings.glade: ditto.
* mozilla-plugin/chem-viewer.cc: fixed license.
* mozilla-plugin/moz-plugin.c: ditto.
* programs/3d/gchem3d-viewer-unstable.desktop.in: add unstable to Name.
* programs/3d/gchem3d-viewer.c: fixed license.
* programs/calc/gchemcalc-unstable.desktop.in: add unstable to Name.
* programs/calc/gchemcalc.cc: fixed license.
* programs/crystal/Makefile.am: add GConf keys.
* programs/crystal/application.cc: fixed license.
* programs/crystal/application.h: ditto.
* programs/crystal/atom.cc: ditto.
* programs/crystal/atom.h: ditto.
* programs/crystal/atomsdlg.cc: ditto.
* programs/crystal/atomsdlg.h: ditto.
* programs/crystal/celldlg.cc: ditto.
* programs/crystal/celldlg.h: ditto.
* programs/crystal/cleavage.cc: ditto.
* programs/crystal/cleavage.h: ditto.
* programs/crystal/cleavagesdlg.cc: ditto.
* programs/crystal/cleavagesdlg.h: ditto.
* programs/crystal/document.cc: ditto.
* programs/crystal/document.h: ditto.
* programs/crystal/gcrystal-unstable.desktop.in: add unstable to Name.
* programs/crystal/gcrystal.h: fixed license.
* programs/crystal/globals.h: ditto.
* programs/crystal/line.cc: ditto.
* programs/crystal/line.h: ditto.
* programs/crystal/linesdlg.cc: ditto.
* programs/crystal/linesdlg.h: ditto.
* programs/crystal/main.cc: ditto.
* programs/crystal/prefs.cc: ditto.
* programs/crystal/prefs.h: ditto.
* programs/crystal/sizedlg.cc: ditto.
* programs/crystal/sizedlg.h: ditto.
* programs/crystal/view-settings.cc: ditto.
* programs/crystal/view-settings.h: ditto.
* programs/crystal/view.cc: ditto.
* programs/crystal/view.h: ditto.
* programs/table/gchemtable-app.cc: ditto.
* programs/table/gchemtable-app.h: ditto.
* programs/table/gchemtable-curve.cc: ditto.
* programs/table/gchemtable-curve.h: ditto.
* programs/table/gchemtable-elt.cc: ditto.
* programs/table/gchemtable-elt.h: ditto.
* programs/table/gchemtable-main.cc: ditto.
* programs/table/gchemtable-unstable.desktop.in: add unstable to Name.
* samples/CO2.gcrystal: add Gnome Crystal stuff.
* samples/CO2_C.gcrystal: ditto.
* samples/CO2_O.gcrystal: ditto.
* samples/Makefile.am: ditto.
* samples/NaCl.gcrystal: ditto.
* samples/diamond.gcrystal: ditto.
* samples/graphite.gcrystal: ditto.
* samples/nickel.gcrystal: ditto.
* samples/zinc.gcrystal: ditto.
2006-02-05 Jean Bréfort <jean.brefort@normalesup.org>
* programs/calc/Makefile.am: fixed some typos.
* programs/crystal/Makefile.am: removed obsolete files.
2006-02-05 Jean Bréfort <jean.brefort@normalesup.org>
* README: update the contents to include Gnome Crystal.
* configure.ac: add checks for some c++ headers.
* gcu/Makefile.am: add new files.
* gcu/application.cc: support new FileChooser class.
* gcu/application.h: ditto.
* gcu/crystaldoc.h: makke CrystalDoc derive from Document.
* gcu/filechooser.cc: new FileChooser class.
* gcu/filechooser.h: ditto.
* programs/crystal/application.cc: make it compile without libgnome(ui).
* programs/crystal/application.h: ditto.
* programs/crystal/atom.cc: ditto.
* programs/crystal/atomsdlg.cc: ditto.
* programs/crystal/atomsdlg.h: ditto.
* programs/crystal/celldlg.cc: ditto.
* programs/crystal/celldlg.h: ditto.
* programs/crystal/cleavagesdlg.cc: ditto.
* programs/crystal/cleavagesdlg.h: ditto.
* programs/crystal/document.cc: ditto.
* programs/crystal/document.h: ditto.
* programs/crystal/linesdlg.cc: ditto.
* programs/crystal/linesdlg.h: ditto.
* programs/crystal/main.cc: ditto.
* programs/crystal/prefs.cc: ditto.
* programs/crystal/prefs.h: ditto.
* programs/crystal/sizedlg.cc: ditto.
* programs/crystal/sizedlg.h: ditto.
* programs/crystal/view-settings.cc: ditto.
* programs/crystal/view-settings.h: ditto.
* programs/crystal/view.cc: ditto.
* programs/crystal/view.h: ditto.
* programs/crystal/dialog.cc: removed obsolete.
* programs/crystal/dialog.h: ditto.
* programs/crystal/element.cc: ditto.
* programs/crystal/element.h: ditto.
* programs/crystal/filesel.cc: ditto.
* programs/crystal/filesel.h: ditto.
2006-02-01 Jean Bréfort <jean.brefort@normalesup.org>
* programs/Makefile.am: move all programs to subdirectories
and import Gnome Crystal source code.
* programs/3d/Makefile.am: new Makefile for gchem3d-viewer.
* programs/3d/gchem3d-viewer-unstable.desktop.in: file moved
from the programs directory.
* programs/3d/gchem3d-viewer.c: ditto.
* programs/3d/gchem3d-viewer.desktop.in: ditto.
* programs/calc/Makefile.am: new Makefile for gchemcalc.
* programs/calc/gchemcalc-unstable.desktop.in: file moved
from the programs directory.
* programs/calc/gchemcalc.cc: ditto.
* programs/calc/gchemcalc.desktop.in: ditto.
* programs/crystal/Makefile.am: new Makefile for gcrystal.
* programs/crystal/application.cc: file imported from
the gcrystal project.
* programs/crystal/application.h: ditto.
* programs/crystal/atom.cc: ditto.
* programs/crystal/atom.h: ditto.
* programs/crystal/atomsdlg.cc: ditto.
* programs/crystal/atomsdlg.h: ditto.
* programs/crystal/celldlg.cc: ditto.
* programs/crystal/celldlg.h: ditto.
* programs/crystal/cleavage.cc: ditto.
* programs/crystal/cleavage.h: ditto.
* programs/crystal/cleavagesdlg.cc: ditto.
* programs/crystal/cleavagesdlg.h: ditto.
* programs/crystal/dialog.cc: ditto.
* programs/crystal/dialog.h: ditto.
* programs/crystal/document.cc: ditto.
* programs/crystal/document.h: ditto.
* programs/crystal/element.cc: ditto.
* programs/crystal/element.h: ditto.
* programs/crystal/filesel.cc: ditto.
* programs/crystal/filesel.h: ditto.
* programs/crystal/gcrystal-unstable.desktop.in: ditto.
* programs/crystal/gcrystal.desktop.in: ditto.
* programs/crystal/gcrystal.h: ditto.
* programs/crystal/globals.h: ditto.
* programs/crystal/line.cc: ditto.
* programs/crystal/line.h: ditto.
* programs/crystal/linesdlg.cc: ditto.
* programs/crystal/linesdlg.h: ditto.
* programs/crystal/main.cc: ditto.
* programs/crystal/prefs.cc: ditto.
* programs/crystal/prefs.h: ditto.
* programs/crystal/sizedlg.cc: ditto.
* programs/crystal/sizedlg.h: ditto.
* programs/crystal/view-settings.cc: ditto.
* programs/crystal/view-settings.h: ditto.
* programs/crystal/view.cc: ditto.
* programs/crystal/view.h: ditto.
* programs/gchem3d-viewer-unstable.desktop.in: file moved
to new subdirectory.
* programs/gchem3d-viewer.c: ditto.
* programs/gchem3d-viewer.desktop.in: ditto.
* programs/gchemcalc-unstable.desktop.in: ditto.
* programs/gchemcalc.cc: ditto.
* programs/gchemcalc.desktop.in: ditto.
* programs/gchemtable-app.cc: ditto.
* programs/gchemtable-app.h: ditto.
* programs/gchemtable-curve.cc: ditto.
* programs/gchemtable-curve.h: ditto.
* programs/gchemtable-elt.cc: ditto.
* programs/gchemtable-elt.h: ditto.
* programs/gchemtable-main.cc: ditto.
* programs/gchemtable-unstable.desktop.in: ditto.
* programs/gchemtable.desktop.in: ditto.
* programs/table/Makefile.am: new Makefile for gchemtable.
* programs/table/gchemtable-app.cc: file moved from the
programs directory.
* programs/table/gchemtable-app.h: ditto.
* programs/table/gchemtable-curve.cc: ditto.
* programs/table/gchemtable-curve.h: ditto.
* programs/table/gchemtable-elt.cc: ditto.
* programs/table/gchemtable-elt.h: ditto.
* programs/table/gchemtable-main.cc: ditto.
* programs/table/gchemtable-unstable.desktop.in: ditto.
* programs/table/gchemtable.desktop.in: ditto.
2006-01-30 Jean Bréfort <jean.brefort@normalesup.org>
* Makefile.am: changed to new develop branch.
* configure.ac: ditto, post branching version bump to 0.7.0, and requires
libgoffice-0.3 >= 0.3.0.
* gcu-0.5.pc.in: removed obsolete.
* gcu-unstable.pc.in: add new one and fix some details.
* gcu.pc.in: remove unuseful things from Libs and Cflags, add
libgoffice-1 to Requires.
* gcu/Makefile.am: changed to new develop branch.
* mozilla-plugin/Makefile.am: ditto.
* programs/Makefile.am: ditto.
* programs/gchemcalc.cc: ditto, and fix a memory leak.
* programs/gchemtable-curve.cc: ditto.
* programs/gchemtable-elt.cc: ditto, and fix a couple of memory leaks.
* tests/Makefile.am: ditto.
2006-01-29 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: changed version to 0.5.4.
* docs/reference/Doxyfile.in: exclude gcu/gtkcomboperiodic.c
* gcu/application.h: update reference documentation.
* gcu/chemistry.h: ditto.
* gcu/dialog.cc: fixed Dialog::GetNumber.
* gcu/dialog.h: update reference documentation.
* gcu/element.h: ditto.
* gcu/formula.h: ditto.
* gcu/gtkchem3dviewer.h: ditto.
* gcu/gtkcomboperiodic.h: ditto.
* gcu/isotope.h: ditto.
* programs/gchem3d-viewer.c: updated copyright in About box.
* programs/gchemcalc.cc: ditto.
* programs/gchemtable-app.cc: ditto.
2006-01-28 Jean Bréfort <jean.brefort@normalesup.org>
* glade/eltpage.glade: add ionic radii list.
* programs/gchemtable-elt.cc: ditto.
2006-01-25 Jean Bréfort <jean.brefort@normalesup.org>
* database/isotopes.xml.in: More radioisotopes.
* glade/curve.glade: added new "Copy" button.
* glade/gchemcalc.glade: ditto.
* programs/gchemcalc.cc: implement graphs copying.
* programs/gchemtable-curve.cc: ditto.
2006-01-21 Jean Bréfort <jean.brefort@normalesup.org>
* po/Makefile.in.in: removed as not required (generated by autogen.sh).
* programs/gchemtable.desktop.in: new desktop file for stable releases.
2006-01-21 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: requires libgnomeprintui.
* database/isotopes.xml.in: More radioisotopes.
* gcu-0.5.pc.in: requires libgnomeprintui.
* gcu.pc.in: ditto.
* gcu/gtkchem3dviewer.cc: add print support.
* gcu/gtkchem3dviewer.h: ditto.
* programs/gchem3d-viewer.c: ditto.
2006-01-15 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/chemistry.h: change GcuValue to GcuDimensionalValue in
GcuAtomicRadius.
* gcu/element.cc: ditto.
* gcu/element.h: update Element::GetRadius documentation.
* glade/eltpage.glade: add support for radii.
* programs/gchemtable-curve.cc: ditto.
* programs/gchemtable-elt.cc: ditto.
2006-01-13 Daniel Leidert <daniel.leidert.spam@gmx.net>
* glade/gchemcalc.glade: Fix a typo.
* gcu/element.cc: Ditto.
2006-01-13 Daniel Leidert <daniel.leidert.spam@gmx.net>
* configure.ac: Remove a duplicate entry.
2006-01-01 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: enhance mozilla related test (now supports firefox).
* gcu/Makefile.am: add gtkcomboperiodic.[c,h].
* gcu/gtkchem3dviewer.cc: enhance mime type detection.
* gcu/gtkcomboperiodic.c: new periodic table combo box widget.
* gcu/gtkcomboperiodic.h: ditto.
* mozilla-plugin/chem-viewer.cc: supports bgcolor and display3d
properties; support mol and pdb files.
* mozilla-plugin/moz-plugin.c: ditto.
* programs/gchem3d-viewer.c: new menu entries to change display mode
and background color changes; also add corresponding command line
options
* programs/gchemcalc.cc: add full command line help options.
2005-12-15 Jean Bréfort <jean.brefort@normalesup.org>
* gcu-0.5.pc.in: require openbalel-2, not openbabel.
* programs/gchemcalc.cc: do not access GOMarker private members.
2005-12-03 Jean Bréfort <jean.brefort@normalesup.org>
* programs/gchemcalc.cc: gchemcalc now accept a formula from the command
line.
* database/isotopes.xml.in: add missing tag ends.
2005-11-21 Jean Bréfort <jean.brefort@normalesup.org>
* database/isotopes.xml.in: add some radioisotopes.
2005-11-21 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: add ru to ALL_LINGUAS.
* gcu/element.cc: add Russian to langs list.
2005-11-19 Jean Bréfort <jean.brefort@normalesup.org>
* programs/gchemtable-curve.cc: add curves for electron affinities
and ionization energies.
2005-11-18 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/chemistry.cc: implemented gcu_dimensional_value_get_string.
* gcu/chemistry.h: fixed signature of gcu_dimensional_value_get_string.
* gcu/element.cc: implemented GetElectronAffinity and GetIonizationEnergy.
* gcu/element.h: use an unsigned parameter for these two methods.
* glade/eltpage.glade: add ionization energies and electron affinity
support.
* programs/gchemtable-elt.cc: ditto.
* programs/gchemtable-curve.cc: started work on new curves.
2005-11-17 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/chemistry.h: add const to unit in GcuDimensionalValue.
* gcu/element.cc: load ionization energies and electron affinities.
* gcu/element.h: ditto.
* gcu/isotope.cc: do not free unit.
2005-11-12 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: changed version to 0.5.3 (post release version bump).
* mozilla-plugin/Makefile.am: fix AM_CXXFLAGS.
2005-11-12 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/chemistry.cc: made some work related to ionization energies
and electron affinities.
* gcu/chemistry.h: ditto.
* gcu/element.cc: ditto.
* gcu/element.h: ditto.
* glade/eltpage.glade: hide isotopes page for now.
* mozilla-plugin/Makefile.am: fix make install.
2005-11-07 Jean Bréfort <jean.brefort@normalesup.org>
* database/elecprops.xml.in: added ionization energies and electron
affinities.
* gcu/gtkchem3dviewer.cc: (gtk_chem3d_viewer_set_uri_with_mime_type):
new.
* gcu/gtkchem3dviewer.h: ditto.
* mozilla-plugin/chem-viewer.cc: make things work.
2005-11-06 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: add one more test for goffice.
* mozilla-plugin/Makefile.am: add chem-viewer program.
* mozilla-plugin/chem-viewer.cc: new viewer for the mozilla plugin.
* mozilla-plugin/moz-plugin.c: (ChemNew), (ChemDestroy),
(ChemSetWindow), (ChemNewStream), (ChemPrint), (ChemStreamAsFile),
(NP_Initialize), (NP_Shutdown): implemented.
* programs/gchemcalc.cc: take goffice api change into account.
* programs/gchemtable-curve.cc: ditto.
2005-11-01 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/application.cc: add datadir arg to constructor and fixed various
issues related to help files.
* gcu/application.h: ditto.
* gcu/bond.cc: fixed loading (for GChemPaint).
* gcu/chemistry.cc: implemented gcu_value_get_string.
* gcu/chemistry.h: Add MAX_ELT constant.
* gcu/element.cc: enhanced internationalization.
* gcu/gtkperiodic.h: fixed a typo in docs.
* glade/Makefile.am: add curve.glade.
* glade/curve.glade: glade file for curve display windows in gchemtable.
* glade/eltpage.glade: use a GtkWindow instead of a GtkDialog, and display
Pauling electronegativity for the element.
* programs/Makefile.am: add gchemtable-curve.*.
* programs/gchemcalc.cc: removed unnecessary code.
* programs/gchemtable-app.cc: activate the button corresponding to the last
viewed element.
* programs/gchemtable-app.h: ditto.
* programs/gchemtable-curve.cc: add curves (just Pauling electronegativity
at the moment).
* programs/gchemtable-curve.h: ditto.
* programs/gchemtable-elt.cc: add code for electronegativity.
* programs/gchemtable-elt.h: ditto.
* programs/gchemtable-main.cc: initialize goffice.
2005-10-22 Jean Bréfort <jean.brefort@normalesup.org>
* Changed license to GPL instead of LGPL.
2005-10-22 Jean Bréfort <jean.brefort@normalesup.org>
* mozilla-plugin/moz-plugin.c: add some code.
2005-10-03 Jean Bréfort <jean.brefort@normalesup.org>
* database/elecprops.xml.in: added electronic configurations.
* gcu/chemistry.cc: add new gcu_value_get_string and
gcu_dimensional_value_get_string.
* gcu/chemistry.h: ditto.
* gcu/element.cc: add electronic configuation support and store names
in all known languages.
* gcu/element.h: ditto.
* glade/eltpage.glade: add some content to display symbol, names,
atomic weight and electronic configuration.
* programs/gchemtable-app.cc: load all available data.
* programs/gchemtable-elt.cc: display symbol, names,
atomic weight and electronic configuration.
2005-09-26 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/application.h: add gcu::Application::GetName
* gcu/dialog.cc: set the window icon using application name.
2005-09-25 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/Makefile.am: added some new utility classes.
* gcu/application.cc: a new generic application class.
* gcu/application.h: ditto.
* gcu/dialog.cc: a new generic dialog class (mostly
imported from GChemPaint)
* gcu/dialog.h: ditto.
* glade/Makefile.am: add eltpage.glade.
* glade/eltpage.glade: changed some widget names.
* programs/Makefile.am: add new files to gchemtable sources.
* programs/gchemtable-app.cc: implemented a gcu::Application
derived class.
* programs/gchemtable-app.h: ditto.
* programs/gchemtable-elt.cc: new class to display element properties
based on gcu::Dialog.
* programs/gchemtable-elt.h: ditto.
* programs/gchemtable-main.cc: moved most of the code to the app class.
2005-09-23 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: add -DG_DISABLE_DEPRECATED -DGTK_DISABLE_DEPRECATED
-Wall to CFLAGS.
* gcu/element.cc: fixed various compilation warnings.
* programs/gchem3d-viewer.c: ditto.
* programs/gchemcalc.cc: ditto.
* programs/gchemtable-main.cc: ditto.
2005-09-22 Jean Bréfort <jean.brefort@normalesup.org>
* Makefile.am: add mozilla-plugin subdir
* configure.ac: ditto.
* gcu/gtkperiodic.c: set text color to white when the background is dark.
* gcu/object.cc: fixed one more Object::AddType bug.
* glade/eltpage.glade: new glade file for periodic table application.
* glade/gchemcalc.glade: removed deprecated item.
* glade/gtkperiodic.glade: removed underscore tag to buttons.
* mozilla-plugin/Makefile.am: new mozilla plugin.
* mozilla-plugin/moz-plugin.c: ditto.
* programs/Makefile.am: added gchemtable application
* programs/gchemcalc.cc: fixed isotopic pattern average mass for
high molecular mass formulas.
* programs/gchemtable-elt.cc: new periodic table application.
* programs/gchemtable-main.cc: ditto.
* programs/gchemtable-unstable.desktop.in: ditto.
2005-09-17 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: changed version to 0.5.2
* gcu/element.cc: changed some method names in gcu::IsotopicPattern.
* gcu/formula.cc: ditto.
* gcu/isotope.cc: ditto.
* gcu/isotope.h: ditto.
2005-09-13 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/element.cc: applied patch for #13273 (compilation failed with gcc-4).
* gcu/element.h: ditto.
2005-09-08 Jean Bréfort <jean.brefort@normalesup.org>
* Makefile.am: make distcheck should now work for non root users.
* configure.ac: update openbabel-2 stuff.
* gcu/gtkchem3dviewer.cc: ditto.
2005-09-07 Jean Bréfort <jean.brefort@normalesup.org>
* programs/gchemcalc.cc: add elemental composition.
2005-08-31 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/isotope.cc: fixed a loop boundary bug.
* programs/gchemcalc.cc: do not display peaks lower than 0.1 in
isotopic patterns instead of 0.001.
2005-08-31 Jean Bréfort <jean.brefort@normalesup.org>
* database/isotopes.xml.in: fixed mass of 13C.
* gcu/element.cc: enhanced isotopic pattern calculation.
* gcu/isotope.cc: ditto.
* gcu/isotope.h: ditto.
* glade/gchemcalc.glade: added monoisotopic mass.
* programs/gchemcalc.cc: display isotopic patterns.
2005-08-30 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/element.cc: finished isotopic pattern calculation.
* gcu/formula.cc: ditto.
* gcu/isotope.cc: ditto.
* gcu/isotope.h: ditto.
* programs/gchemcalc.cc: calculate isotopic pattern and show the
notebook page only if valid.
2005-08-16 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: requires goffice >= 0.0.3.
* database/isotopes.xml.in: fixed errors.
* gcu/crystalatom.cc: added missing headers.
* gcu/element.cc: started work on isotopic pattern calculation.
* gcu/element.h: ditto.
* gcu/formula.cc: ditto.
* gcu/isotope.cc: ditto.
* gcu/isotope.h:ditto.
* glade/gchemcalc.glade: add widgets to display composition and
isotopic pattern.
2005-07-24 Jean Bréfort <jean.brefort@normalesup.org>
* database/isotopes.xml.in: name is now a child node instead of a property
to avoid duplication of the whole isotope node on translation.
* gcu/Makefile.am: add isotope.*
* gcu/chemistry.h: add GcuIsotope, GcuValue and GcuDimensionalValue structs
and use GcuValue instead of double in radii.
* gcu/crystalatom.cc: use GcuValue in radii.
* gcu/crystalatom.h: ditto.
* gcu/element.cc: load isotopes database.
* gcu/element.h: ditto.
* gcu/formula.cc: add gcu::Formula::CalculateIsotopicPattern (not yet
implemented).
* gcu/formula.h:
* gcu/isotope.cc: new file; implements gcu::Isotope and
gcu:IsotopicPattern.
* gcu/isotope.h: ditto.
* gcu/object.cc (gu::Object::AddType): use vector::resize instead
of vector::reserve.
* gcu/xml-utils.cc: use GcuValue in radii.
* programs/gchemcalc.cc: load isotopes database.
2005-07-13 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/object.cc: fixed a recent critical bug.
2005-07-03 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: requires openbabel >= 2.0.0.
* gcu/gtkchem3dviewer.cc: use openbabel-2.0.0.
2005-06-29 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: changed version to 0.5.1, requires gtk+>2.6.0
* database/isotopes.xml.in: added stable isotopes for all elements.
2005-06-27 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/gtkperiodic.c: (gtk_periodic_init): use glade file from unstable
directory.
* glade/gtkperiodic.glade: added elements 113, 115 and 116.
2005-06-27 Jean Bréfort <jean.brefort@normalesup.org>
* programs/Makefile.am: fixed CFLAGS and CXXFLAGS.
2005-06-27 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/gtkchem3dviewer.cc: clear molecule before loading.
* glade/gchemcalc.glade: minor size update.
* programs/gchem3d-viewer.c: implement menus.
* programs/gchemcalc.cc: ditto.
2005-06-26 Jean Bréfort <jean.brefort@normalesup.org>
* database/isotopes.xml.in: fixed typos.
* programs/Makefile.am: added gchemcalc desktop file.
* programs/gchem3d-viewer.c: added menus.
* programs/gchem3d-viewer.desktop.in: added categories.
* programs/gchem3d-viewer-unstable.desktop.in: ditto.
* programs/gchemcalc.desktop.in: new desktop file for gchemcalc.
* programs/gchemcalc-unstable.desktop.in: ditto.
2005-06-21 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/formula.cc: enhanced molecular weight calculation.
* gcu/formula.h: ditto.
* programs/gchemcalc.cc: ditto.
* glade/Makefile.am: install glade files to unstable dir.
2005-06-19 Jean Bréfort <jean.brefort@normalesup.org>
* database/elements.xml.in: added atomic weights for artificial elements.
* gcu/chemistry.cc: added new databases functions.
* gcu/chemistry.h: ditto.
* gcu/element.cc: implement radii and electronic props database loading.
* gcu/element.h: ditto.
* gcu/formula.cc: calculates molecular weight.
* gcu/formula.h: ditto.
* glade/gchemcalc.glade: add molecular weight labels.
* programs/gchem3d-viewer.c (main):: load radii database.
* programs/gchemcalc.cc: display molecular weight.
* tests/testgtkchem3dviewer.c: (main): load radii database.
* tests/testgtkcrystalviewer.c: (main): load radii database.
2005-06-18 Jean Bréfort <jean.brefort@normalesup.org>
* Makefile.am: added database to SUBDIRS.
* configure.ac: tests for vector::at usability.
* database/Makefile.am: new file.
* database/elecprops.xml.in: new database.
* database/elements.xml.in: moved from gcu and split.
* database/isotopes.xml.in: new database.
* database/radii.xml.in: new database.
* gcu/Makefile.am: removed programs.
* gcu/atom.cc: fixed some compilation issues.
* gcu/bond.cc: ditto.
* gcu/crystalatom.cc: ditto.
* gcu/crystaldoc.cc: ditto.
* gcu/crystalview.cc: ditto.
* gcu/element.cc: ditto.
* gcu/element.h: ditto.
* gcu/formula.cc: ditto.
* gcu/gtkchem3dviewer.cc: ditto.
* gcu/gtkperiodic.c: ditto.
* gcu/object.cc: ditto.
* gcu/object.h: ditto.
* gcu/xml-utils.cc: ditto.
* gcu/elements.xml.in:
* gcu/gchem3d-viewer-0.5.desktop.in: removed obsolete.
* gcu/gchem3d-viewer.desktop.in: moved to programs.
* gcu/gchem3d-viewer.c: ditto.
* po/POTFILES.in: updated to new architecture.
* programs/Makefile.am: added gchem3d viewer.
* programs/gchem3d-viewer-unstable.desktop.in: new file.
* programs/gchem3d-viewer.c: moved from gcu.
* programs/gchem3d-viewer.desktop.in: ditto.
* programs/gchemcalc.cc: use glade file from unstable directory.
* tests/Makefile.am: fixed typos.
2005-04-26 Jean Bréfort <jean.brefort@normalesup.org>
* docs/reference/Makefile.am: fix installation directory.
* gcu/formula.cc: completed initial version.
* gcu/formula.h: ditto.
* gcu/gchem3d-viewer.c: update copyright.
* gcu/object.h: add inline method Object::LockSignals.
* glade/Makefile.am: add gchemcalc.glade.
* glade/gchemcalc.glade: add widgets for formulas.
* programs/Makefile.am: make gcjemcalc compile.
* programs/gchemcalc.cc: calculates raw formula.
2005-04-10 Jean Bréfort <jean.brefort@normalesup.org>
* Makefile.am: added prograps directory.
* configure.ac: ditto.
* gcu/formula.cc: added some code.
* gcu/formula.h: ditto.
* glade/gchemcalc.glade: glade file for new program.
* po/POTFILES.in: added new glade file.
* programs/Makefile.am: new file.
* programs/gchemcalc.cc: new chemical calculator source file.
2005-03-29 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: one more build issue fixed.
* gcu/Makefile.am: added formula.*
* gcu/formula.cc: new gcu::Formula class file.
* gcu/formula.h: ditto.
* tests/Makefile.am: one more build issue fixed.
2005-03-24 Jean Bréfort <jean.brefort@normalesup.org>
* Doxyfile: removed (moved to docs/reference).
* Makefile.am: remobed keys and mime files.
* TODO: set some possible targets for 0.6
* autogen.sh: don't generate docs.
* configure.ac: gtkglest and openbabel are now mandatory. Fixed also
variuous buil issues.
* docs/reference/Doxyfile.in: source for Doxyfile.
* docs/reference/Makefile.am: fixed build issues and builds help at
compile time
* docs/reference/html/Makefile.am: removed.
* gchemutils.xml.in: added some magic stuff from chemicalmime package
to fix pdb files detection issues.
* gcu-0.5.pc.in: updated names and dependencies.
* gcu.pc.in: ditto.
* gcu/gchem3d-viewer.c: (main): build full url for input file.
* gcu/gtkchem3dviewer.cc: use GNOME_VFS_FILE_INFO_FORCE_SLOW_MIME_TYPE.
* gcu/object.cc: fixed a critical (and trivial) bug in Object::AddType.
* gcu/object.h: fixed a doxygen related warning.
* tests/testbonobocontrol.c: removed (bonobo control has been obsoleted).
2005-03-08 Jean Bréfort <jean.brefort@normalesup.org>
* Makefile.am: fixed various build issues.
* configure.ac: ditto.
* gcu/Makefile.am: ditto.
* tests/Makefile.am: ditto.
* glade/mendeleiev.glade: remove deprecated.
* po/POTFILES.in: removed obsoolete server file
2005-03-07 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: Changed version to 0.5.0.
* gcu-0.3.pc.in: moved to gcu-0.5.pc.in.
* gcu-0.5.pc.in: wad gcu-0.3.pc.in.
* gcu.pc.in: removed deprecated stuff.
* gcu/bonobo-control.cc: remove, libbonoboui will be deprecated before
we reach 0.6.
* gcu/gchem3d-0.3.server.in.in: ditto.
* gcu/gchem3d-viewer-0.5.desktop.in: imported from stable and renamed
for unstable.
* gcu/gchem3d-viewer.c: imported from stable.
* gcu/gchem3d-viewer.desktop.in: ditto.
2005-03-02 Daniel Leidert <daniel.leidert@wgdd.de>
* docs/reference/html/Makefile.am: add $(DESTDIR) to install-path
2004-12-12 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: added de locale.
* glade/gtkperiodic.glade: updated symbols for elements 110 and 111.
2004-12-03 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/object.cc: fixed Object::Load. Does not anymore returns false when
something goes wrong. Just delete the bad object.
2004-12-03 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/object.h,
* gcu/object.cc: add a bool member to Object class to avoid signal
propagation while loading.
2004-11-28 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/document.h: changed signature of Document::GetNewId and made it
private, add friend class Object.
* gcu/document.cc: enhanced Document::GetNewId.
* gcu/object.cc: fixed various bugs around Object::SetId and
Object::AddChild
2004-11-17 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/chemistry.h: fixed documentation.
* gcu/crystalatom.cc: initialize alpha color component in constructor.
* gcu/object.cc: fixed a bug in Object::AddType.
2004-10-10 Jean Bréfort <jean.brefort@normalesup.org>
* gcu/elements.xml.in,
* glade/gtkperiodic.glade: Changed element 111 name and symbol to
Roentgenium and Rg according to IUPAC recommendation.
* configure.ac: updated version to 0.3.2.
* Doxyfile: updated version to 0.3.2.
* gcu/object.h,
* gcu/object.cc: added an Object* parameter to BuildContextualMenu.
2004-09-17 Jean Bréfort <jean.brefort@normalesup.org>
* gcu-0.3.pc.in: removed obsolete gl_flags from CFlags
2004-09-17 Jean Bréfort <jean.brefort@normalesup.org>
* configure.ac: removed obsolete variables, added test
for shared-mime-info package version.
* Doxyfile: updated version to 0.3.1
* Makefile.am: added shared mime info stuff.
* gchemutils.xml.in: new file to support shared mime info
(mime types tree will be polluted with chemical/* types).
* gcu/atom.cc,
* gcu/bond.cc,
* gcu/element.cc,
* gcu/crystalcleavage.cc,
* gcu/crystaldoc.cc,
* gcu/crystalline.cc,
* gcu/crystalview.cc,
* gcu/gtkchem3dviewer.cc
* gcu/gtkcrystalviewer.cc,
* gcu/gtkperiodic.c: Fixed some memory leaks.
* gcu/crystalviewer.h: include gcu/matrix.h instead of just matrix
* gcu/object.h: add support for signals and links.
* gcu/object.cc: enhanced ~Object (), fixed a critical
bug in Object::AddChild, implemented signals and links,
Object::GetGroup returns NULL if there is no parent and
fixed memory leaks.
* gcu/xml-utils.cc: Fixed some memory leaks.
2004-06-26 Jean Bréfort <jean.brefort@ac-dijon.fr>
*configure.ac: fixed a bug.
2004-06-16 Jean Bréfort <jean.brefort@ac-dijon.fr>
* configure.ac: requires gnome 2.4.
* object.h: removed Object::ShowContextualMenu and changed
signature of Object::BuildContextualMenu and made it public.
* object.cc: same thing and add a default implementation for
Object::BuildContextualMenu.
2004-06-16 Jean Bréfort <jean.brefort@ac-dijon.fr>
* configure.ac: changed version to 0.3.1
* gcu/bonobo-control.cc: move data.h (from Openbabel) inclusion to top
and undef variables before including config.h
2004-06-13 Jean Bréfort <jean.brefort@ac-dijon.fr>
* gcu/elements.xml.in: changed some colors to be compatible with a new
coloring scheme common to several open source projects.
2004-06-10 Jean Bréfort <jean.brefort@ac-dijon.fr>
* gcu/document.cc: fixed a bug in Document::GetNewId.
2004-06-02 Jean Bréfort <jean.brefort@ac-dijon.fr>
* gcu/object.h: added gObject::GetYAlign and updated some documentation.
* gcu/object.cc: added gObject::GetYAlign and implemented default versions
for Object::Save and Object::Load.
2004-05-29 Jean Bréfort <jean.brefort@ac-dijon.fr>
* gcu/object.h,
* gcu/object.cc: added throw (invalid_argument) to Object::Build.
2004-05-21 Jean Bréfort <jean.brefort@ac-dijon.fr>
* gcu/object.cc: fixed a stupid bug in Object::AddType.
2004-05-20 Jean Bréfort <jean.brefort@ac-dijon.fr>
* gcu/bond.h,
* gcu/crystalatom.h,
* gcu/crystalbond.h,
* gcu/crystalcleavage.cc,
* gcu/crystalcleavage.h,
* gcu/crystaldoc.h,
* gcu/crystalline.h,
* gcu/crystalview.h,
* gcu/document.h,
* gcu/element.cc,
* gcu/element.h,
* gcu/gtkchem3dviewer.h,
* gcu/gtkcrystalviewer.h,
* gcu/gtkperiodic.h,
* gcu/matrix.h,
* gcu/matrix2d.h: Updated docs
* gcu/object.cc,
* gcu/object.h: Added several new methods related to the document structure and
updated the documentatioh.
2004-05-02 Jean Bréfort <jean.brefort@ac-dijon.fr>
* gcu/Makefile.am: add new matrix2d.* files
* gcu/object.cc,
* gcu/object.h: add virtual Transform2D method to support 2D transforms (flip and rotation).
* gcu/atom.cc,
* gcu/atom.h: implements Transform2D
* gcu/bond.cc,
* gcu/bond.h: implements Move and Transform2D to avoid execution of Object methods.
* gcu/matrix.cc,
* gcu/matrix.h: minor changes (replaces gdouble by double).
* gcu/matrix2d.cc,
* gcu/matrix2d.h: new Matrix2D class used with Object::Transform2D.
* tests/Makefile.am: remove obsolete dependencies.
2004-04-09 Jean Bréfort <jean.brefort@ac-dijon.fr>
* gcu/atom.h: minor update
* gcu/bonobo-control.cc: fixed factory and control id
* gcu/document.cc:
* gcu/document.h: implemented Document class
* gcu/object.cc:
* gcu/object.h: use Document class
* tests/testbonobocontrol.c: (create_app), (main): use unstable control
and removed libgnome and libgnomeui dependencies.
2004-04-07 Jean Bréfort <jean.brefort@ac-dijon.fr>
* moved all libraries sources to the new gcu directory and
merged the four libraries in one (libgcu-0.3).
* changed every necessary things to make things compile and
not interfere with the stable version.
* added gcu/document.* (not yet implemented).
2004-03-10 Jean Bréfort <jean.brefort@ac-dijon.fr>
*configure.ac: removed unused gtk-doc checking
* AUTHORS: new polish tranlator
* crystalviewer/crystalatom.cc: avoid calling SetDefaultColor in constructor when
Z == 0 (critical bug).
2004-02-13 Jean Bréfort <jean.brefort@ac-dijon.fr>
* configure.ac: removed an extra "fi"
2004-02-13 Jean Bréfort <jean.brefort@ac-dijon.fr>
* configure.ac: updated some required versions and
removed GtkGLArea which is unmaintained, removed
definition of *_DISABLE_DEPRECATED
2004-02-08 Jean Bréfort <jean.brefort@ac-dijon.fr>
* Makefile.am: fixed file list in EXTRA_DIST
* gtkperiodic/gtkperiodic.c (gtk_periodic_init): removed const before char
to avoid a compiler warning.
2004-02-07 Jean Bréfort <jean.brefort@ac-dijon.fr>
* Makefile.am
* tests/Makefile.am: update to work with automake 1.8.x
2004-02-07 Jean Bréfort <jean.brefort@ac-dijon.fr>
* chem3d/gtkchem3dviewer.cc: turn around an openbabel bug.
* gtkperiodic/gtkperiodic.c: (gtk_periodic_init): fixed a textdomain bug.
* gtkperiodic/gtkperiodic.c: add a call to textdomain.
* chemistry/element.cc: removed gettext initialization.
2004-01-21 Jean Bréfort <jean.brefort@ac-dijon.fr>
* crystalviewer/crystalview.cc: avoid execution of gl functions
for non initialized widget.
2003-11-01 Jean Bréfort <jean.brefort@ac-dijon.fr>
* enhanced gchemutils.keys.in for translation
2003-10-21 Jean Bréfort <jean.brefort@ac-dijon.fr>
* changed element 110 to Darmstadtium.
2003-10-20 Jean Bréfort <jean.brefort@ac-dijon.fr>
* changed version to 0.3.0
2003-08-27 Jean Bréfort <jean.brefort@ac-dijon.fr>
* removed -Werror-implicit-function-declaration from GCU_CFLAGS
2003-08-27 Jean Bréfort <jean.brefort@ac-dijon.fr>
* crystalview.h: made private some members.
* crystaldoc.h: removed m_bMultiView
* object.cc (Object::AddChild): fixed a bug.
* added Object::GetAtomAt
* changed version to 0.1.7
* added some documentation using doxygen
* element.[h,cc]: added methods to get max_bond field
* elements.xml.in: added max_bonds for each element
2003-07-02 Jean Bréfort <jean.brefort@ac-dijon.fr>
* configure.ac: changed version to 0.1.6
* chem3d/gtkchem3dViewer.cc: added bgcolor property
* chem3d/bonobo-control.cc: added bgcolor property
2003-06-30 Jean Bréfort <jean.brefort@ac-dijon.fr>
* chemistry/elements.cc (GetRadius): added missing return statement
2003-06-29 Jean Bréfort <jean.brefort@ac-dijon.fr>
* tests/nickel.gcrystal: updated to 0.5.2 format
* chemistry/elements.cc, chemistry/xml-utils.cc: fixed several
bugs related to the use of the radii database
* crystalviewer/crystalatom.cc: wrote a sensible SetRadius method
2003-06-28 Jean Bréfort <jean.brefort@ac-dijon.fr>
* element.cc: a bug fixed in the database loading
* gtkchem3dviewer.cc: change the coordinates system to get with
gchem3d and mozilla-bonobo something more similar to chime
* crystalatom.h: add const to argument of SetRadius
2003-06-27 Jean Bréfort <jean.brefort@ac-dijon.fr>
* Updated GtkChem3D dependencies to OpenBabel-0.100.1
2003-06-16 Jean Bréfort <jean.brefort@ac-dijon.fr>
* Change atoms radii in crystal from double to GcuCrystalRadius
2003-06-12 Jean Bréfort <jean.brefort@ac-dijon.fr>
* Added a PropertyBag to the Chem3D Bonobo Control
* New program test for the Bonobo Control
2003-06-02 Jean Bréfort <jean.brefort@ac-dijon.fr>
* Implemented functions to retrieve electronegativities and radii
* Fixed an error in elements.xml.in
2003-05-30 Jean Bréfort <jean.brefort@ac-dijon.fr>
* Added GtkChem3DViewer widget along with a Bonobo control using it
* Added atomic radii and electronegativities to elements.xml.in
2003-03-25 Pav Lucistnik <pav@oook.cz>
* Fixed compilation problems with gcc-2.95.x
2003-02-22 Jean Bréfort <jean.brefort@ac-dijon.fr>
* Changed constructor for CrystalAtom: deleted color and radius parameters making new versions incompatible with gcrystal-0.5.0
* Use default colors for atoms when none is given
* Fixed a bug in Bond::GetAtom(Atom)
* Added -DLIBGLADE_DISABLE_DEPRECATED
2003-02-12 Jean Bréfort <jean.brefort@ac-dijon.fr>
* Changed GL binding preference from GtkGLArea to GtkGLExt
* Added AddType to the ObjectClass to allow for unknown types
* Added elements names and default colors (taken from OpenBabel) to elements
* Added C binding (chemistry.h) to Element class
* Added tooltips (names of the elements) and possibility for default colors in GtkPeriodic
* Added the colors to testgtkperiodic
2002-12-15 Jean Bréfort <jean.brefort@ac-dijon.fr>
* Updated GtkGLExt dependency to 0.6.0
2002-12-13 Jean Bréfort <jean.brefort@ac-dijon.fr>
* Added missing file tests/nickel.gcrystal in tests/Makefile.am
2002-12-8 Jean Bréfort <jean.brefort@ac-dijon.fr>
* Updated libgnomeprint dependency to 2.1.3
2002-12-1 Jean Bréfort <jean.brefort@ac-dijon.fr>
* Added m_Charge to Atom class
* Change Object::SetSelected(int) to Object::SetSelected(GtkWidget*, int)
2002-11-27 Jean Bréfort <jean.brefort@ac-dijon.fr>
* Added SetSelected(int) and Update(GtkWidget*) to the Object class
2001-05-13 Jean Bréfort <jean.brefort@ac-dijon.fr>
* Released version 0.1.0
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