File: gmAMIS.de.sql

package info (click to toggle)
gnumed-server 22.31-1
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid, trixie
  • size: 46,268 kB
  • sloc: sql: 1,217,633; python: 15,878; sh: 1,590; makefile: 20
file content (473 lines) | stat: -rw-r--r-- 15,163 bytes parent folder | download | duplicates (7)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
-- ===============================================
-- This script creates tables of import of
-- information as provided by the german AMIS database

-- $Source: /home/ncq/Projekte/cvs2git/vcs-mirror/gnumed/gnumed/server/sql/country.specific/de/gmAMIS.de.sql,v $
-- author: Hilmar Berger, Karsten Hilbert
-- version: $Revision: 1.6 $
-- license: GPL v2 or later
-- TODO: further processing of the data (normalizing)
-- =====================================================================================
reset client_encoding;

-- =====================================================================================
-- amis_praeparate : table of preparations
-- =====================================================================================
\unset ON_ERROR_STOP
drop table amis_praeparate;
\set ON_ERROR_STOP 1

create table amis_praeparate (
	connection_id int8 primary key,
	brandname varchar(78),
	drug_presentation char(3),
	combi_package char(1),
	indication_key_1 char(5),
	indication_key_2 char(5),
	manufacturer_key int,
	red_list_key int,
	negative_list_flag char(1),
	sale_regulations_code char(1),
	atc_code char(7),
	drug_descriptive_text_key int8,
	volume_weight_value varchar(7),
	volume_weight_unit varchar(8),
	volume_weight_description varchar(15),
	dose_relation_value char(7),
	dose_relation_description varchar(15),
	package_relation_value char(7),
	package_relation_description varchar(15),
	second_manufacturer_key int
);

-- =====================================================================================
-- amis_praeparate : table of preparations (combinations of more than one drug /package)
-- =====================================================================================
\unset ON_ERROR_STOP
drop table amis_praeparate_combination;
\set ON_ERROR_STOP 1

create table amis_praeparate_combination (
	connection_id int8 primary key,
	connection_key_combination int8,
	brandname varchar(78),
	drug_presentation char(3),
	combi_package char(1),
	indication_key_1 char(5),
	indication_key_2 char(5),
	manufacturer_key int,
	red_list_key int,
	negative_list_flag char(1),
	sale_regulations_code char(1),
	atc_code char(7),
	drug_descriptive_text_key int8,
	volume_weight_value varchar(7),
	volume_weight_unit varchar(8),
	volume_weight_description varchar(15),
	dose_relation_value varchar(7),
	dose_relation_description varchar(15),
	package_relation_value varchar(7),
	package_relation_description varchar(15),
	second_manufacturer_key int
);

-- =====================================================================================
-- amis_substances : table of substances
-- =====================================================================================
\unset ON_ERROR_STOP
drop table amis_substances;
\set ON_ERROR_STOP 1

create table amis_substances (
	connection_id int8,
	id int,
	dose varchar(20),
	unit varchar(8),
	suffix varchar(100),  -- this is should be different if the same substance appears more
	    	    	    	    -- than once within the same drug
	additive_flag char(2) -- 'j' if this is an additive
);

-- =====================================================================================
-- amis_substances_extended : extended info of substances
-- =====================================================================================
\unset ON_ERROR_STOP
drop table amis_substances_extended;
\set ON_ERROR_STOP 1

create table amis_substances_extended (
	connection_id int8,
	id int,
	dose varchar(20),
	unit varchar(8),
	suffix varchar(100),  -- this is should be different if the same substance appears more
	    	    	    	    -- than once within the same drug
	additive_flag char(2), -- 'j' if this is an additive
	primary_substance_info_key int -- the substance the extended information refers to
);

-- =====================================================================================
-- amis_substances_names : names of substances
-- =====================================================================================
\unset ON_ERROR_STOP
drop table amis_substances_names;
\set ON_ERROR_STOP 1

create table amis_substances_names (
	substance_id int,
	substance_name varchar(160),
	substance_sort_name varchar(160), -- same as name but lowercase and without spaces
	substance_text_key int,
	substance_classification int8 
);

-- =====================================================================================
-- amis_indications 
-- =====================================================================================
\unset ON_ERROR_STOP
drop table amis_indications;
\set ON_ERROR_STOP 1

create table amis_indications (
	indication_key char(5),
	indication_name varchar(95)
);

-- =====================================================================================
-- amis_warnings 
-- =====================================================================================
\unset ON_ERROR_STOP
drop table amis_warnings;
\set ON_ERROR_STOP 1

create table amis_warnings (
	connection_id int8,
	warning_id char(4)  	-- refers to amis_warning_text
);

-- =====================================================================================
-- amis_warning_text 
-- =====================================================================================
\unset ON_ERROR_STOP
drop table amis_warning_text;
\set ON_ERROR_STOP 1

create table amis_warning_text (
	warning_id char(3),
	warning_text varchar(250)  
);

-- =====================================================================================
-- amis_manufacturer
-- =====================================================================================
\unset ON_ERROR_STOP
drop table amis_manufacturer;
\set ON_ERROR_STOP 1

create table amis_manufacturer (
	manufacturer_key int,
	manufacturer_name varchar(50),
	manufacturer_name_long varchar(80),
	manufacturer_postbox varchar(20),
	manufacturer_street varchar(30),
	manufacturer_postcode_postbox char(5),
	manufacturer_postcode_street char(5),
	manufacturer_city varchar(25),
	manufacturer_country varchar(3),
	manufacturer_phone_number varchar(20),
	manufacturer_fax_number varchar(20)
);

-- =====================================================================================
-- amis_manuf_emergency_call
-- =====================================================================================
\unset ON_ERROR_STOP
drop table amis_manuf_emergency_call;
\set ON_ERROR_STOP 1

create table amis_manuf_emergency_call (
	manufacturer_key int,
	phone_number varchar(20),
	availability char(1),
	description varchar(76)	
);

-- ===============================================
-- do the same thing with the ATC codes
-- ===============================================
\unset ON_ERROR_STOP
drop table amis_atc;
\set ON_ERROR_STOP 1

create table amis_atc (
	code char(7) primary key,
	atc_text text
);

-- ===============================================
-- amis drug descriptions
-- ===============================================
\unset ON_ERROR_STOP
drop table amis_drug_description;
\set ON_ERROR_STOP 1

create table amis_drug_description (
	text_key int8,
	type char(1),
	drug_text text
);

-- ===============================================
-- amis substance descriptions
-- ===============================================
\unset ON_ERROR_STOP
drop table amis_substance_description;
\set ON_ERROR_STOP 1

create table amis_substance_description (
    text_key int,
	type int,
	substance_text text
);

-- ===============================================
-- amis prices
-- ===============================================
\unset ON_ERROR_STOP
drop table amis_price;
\set ON_ERROR_STOP 1

create table amis_price (
	central_pharma_number int,
	connection_id int8,
	brand_name varchar(26),
	preparation_type char(3),
	package_content varchar(9), -- contains value + unit
	package_content_value varchar(6), -- internal use only
	package_content_unit varchar(3), -- internal use only
	package_price varchar(7), -- fixed point (5.2) format
	sale_regulation char(1),
	narcotic char(1),
	commercial_availability char(1),
	negative_list char(1),
   	fixed_price varchar(7),	-- fixed point (5.2) format
	fixed_price_comparison_key int,
	patient_price varchar(7), -- "Zuzahlung"
   	outdated_cpn_1 int,    -- outdated central pharma number
	outdated_cpn_2 int,
	original_cpn int, 	-- used for imported drugs
	price_manufacturer_key int,
	period_of_validity char(9)  -- dd/mm/yy
);

-- =====================================================================================
-- amis_price_manufacturer
-- =====================================================================================
\unset ON_ERROR_STOP
drop table amis_price_manufacturer;
\set ON_ERROR_STOP 1

create table amis_price_manufacturer (
	code int primary key,
	manufacturer_name varchar(22),
	name_long varchar(22),
	postbox varchar(6),
	street varchar(22),
	postcode_postbox char(5),
	postcode_street char(5),
	city varchar(23),
	country varchar(3),
	phone_number varchar(17),
	fax_number varchar(17)
);

-- =====================================================================================
-- amis_presentation
-- =====================================================================================
\unset ON_ERROR_STOP
drop table amis_presentation;
\set ON_ERROR_STOP 1

create table amis_presentation (
	name_short char(3),
	name_long varchar(50),
	drug_form_code char(1),
	application_form_code char(1),
	application_route_code char(2),
	site_of_action_code char(1)
);

-- =====================================================================================
-- amis_interaction_groups
-- =====================================================================================
\unset ON_ERROR_STOP
drop table amis_interaction_groups;
\set ON_ERROR_STOP 1

create table amis_interaction_groups (
	code int primary key,
	first_interaction_group text,
	second_interaction_group text,
	significance_code char(5),
	effect text	
);

-- =====================================================================================
-- amis_documented_interaction
-- =====================================================================================
\unset ON_ERROR_STOP
drop table amis_documented_interaction;
\set ON_ERROR_STOP 1

create table amis_documented_interaction (
	code int,
	interaction_group_number char(1), -- group 1 or 2 
	substance_number char(7), -- refers to amis_substances
	connection_id char(11) --refers to amis_praeparate
);

-- =====================================================================================
-- amis_expected_interaction
-- =====================================================================================
\unset ON_ERROR_STOP
drop table amis_expected_interaction;
\set ON_ERROR_STOP 1

create table amis_expected_interaction (
	code int,
	interaction_group_number char(1), -- group 1 or 2 
	substance_number char(7), -- refers to amis_substances
	connection_id char(11) --refers to amis_praeparate
);

-- =====================================================================================
-- amis_undecided_interaction
-- =====================================================================================
\unset ON_ERROR_STOP
drop table amis_undecided_interaction;
\set ON_ERROR_STOP 1

create table amis_undecided_interaction (
	code int,
	interaction_group_number char(1), -- group 1 or 2 
	substance_number char(7), -- refers to amis_substances
	connection_id char(11) --refers to amis_praeparate
);

-- =====================================================================================
-- amis_unlikely_interaction
-- =====================================================================================
\unset ON_ERROR_STOP
drop table amis_unlikely_interaction;
\set ON_ERROR_STOP 1

create table amis_unlikely_interaction (
	code int,
	interaction_group_number char(1), -- group 1 or 2 
	substance_number char(7), -- refers to amis_substances
	connection_id char(11) --refers to amis_praeparate
);

-- =====================================================================================
-- amis_interaction_type
-- =====================================================================================
\unset ON_ERROR_STOP
drop table amis_interaction_type;
\set ON_ERROR_STOP 1

create table amis_interaction_type (
	code int,
	type text, 
	type_code char(1),
	mechanism text
);

-- =====================================================================================
-- amis_interaction_text
-- =====================================================================================
\unset ON_ERROR_STOP
drop table amis_interaction_text;
\set ON_ERROR_STOP 1

create table amis_interaction_text (
	code int,
	part char(1), 
	text text
);


-- =====================================================================================
-- grant appropriate rights
-- =====================================================================================
GRANT SELECT ON
	amis_praeparate,
	amis_praeparate_combination, 
	amis_substances, 
	amis_substances_extended, 
	amis_substances_names, 
	amis_indications, 
	amis_warnings, 
	amis_warning_text, 
	amis_manufacturer, 
	amis_manuf_emergency_call, 
	amis_atc, 
	amis_drug_description, 
	amis_substance_description, 
	amis_price, 
	amis_price_manufacturer, 
	amis_presentation, 
	amis_interaction_groups, 
	amis_documented_interaction, 
	amis_expected_interaction, 
	amis_undecided_interaction, 
	amis_unlikely_interaction, 
	amis_interaction_type, 
	amis_interaction_text
TO GROUP "gm-public";

-- =============================================                                
-- do simple schema revision tracking                                           
INSERT INTO gm_schema_revision (filename, version) VALUES('$RCSfile: gmAMIS.de.sql,v $', '$Revision: 1.6 $'); 

-- ==========================================================
-- == changelog =============================================
--	21.10.2001: first implementation
--	30.11.2001: \set & \unset applied correctly
--
-- $Log: gmAMIS.de.sql,v $
-- Revision 1.6  2005-09-19 16:38:52  ncq
-- - adjust to removed is_core from gm_schema_revision
--
-- Revision 1.5  2005/07/14 21:31:43  ncq
-- - partially use improved schema revision tracking
--
-- Revision 1.4  2004/01/09 03:11:45  ncq
-- - reset client encoding
--
-- Revision 1.3  2003/10/26 18:10:06  ncq
-- - separate schema and data better
--
-- Revision 1.2  2003/10/26 16:07:07  hinnef
-- initial AMIS-schema and data import
--
-- Revision 1.1  2003/10/26 13:58:59  hinnef
-- - initial revision: sql script to install AMIS schema
--
-- Revision 1.5  2002/11/10 13:56:17  ncq
-- - need to use grant to GROUP when granting to group, obviously !!
--
-- Revision 1.4  2002/11/04 16:00:17  hinnef
-- bugfixes in amis_substances etc.
--
-- Revision 1.3  2002/10/29 23:18:11  ncq
-- - ha! remove creation of indices - this only makes sense after importing the data
--
-- Revision 1.2  2002/10/29 23:15:29  ncq
-- - cleanup, ACL structure
--
-- Revision 1.1  2002/10/24 12:56:38  ncq
-- - initial checkin
-- - split into creation of tables and import of data so people
--   without the data can still import the structure
-- - fix whitespace and typos, make layout more consistent
--