1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388
|
// Licensed to the Apache Software Foundation (ASF) under one
// or more contributor license agreements. See the NOTICE file
// distributed with this work for additional information
// regarding copyright ownership. The ASF licenses this file
// to you under the Apache License, Version 2.0 (the
// "License"); you may not use this file except in compliance
// with the License. You may obtain a copy of the License at
//
// http://www.apache.org/licenses/LICENSE-2.0
//
// Unless required by applicable law or agreed to in writing, software
// distributed under the License is distributed on an "AS IS" BASIS,
// WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
// See the License for the specific language governing permissions and
// limitations under the License.
package pqarrow_test
import (
"bytes"
"context"
"fmt"
"math"
"testing"
"unsafe"
"github.com/apache/arrow-go/v18/arrow"
"github.com/apache/arrow-go/v18/arrow/array"
"github.com/apache/arrow-go/v18/arrow/memory"
"github.com/apache/arrow-go/v18/parquet"
"github.com/apache/arrow-go/v18/parquet/compress"
"github.com/apache/arrow-go/v18/parquet/file"
"github.com/apache/arrow-go/v18/parquet/pqarrow"
"github.com/stretchr/testify/require"
"golang.org/x/exp/rand"
"gonum.org/v1/gonum/stat/distuv"
)
const alternateOrNA = -1
const SIZELEN = 1024 * 1024
func randomUint8(size, truePct int, sampleVals [2]uint8, seed uint64) []uint8 {
ret := make([]uint8, size)
if truePct == alternateOrNA {
for idx := range ret {
ret[idx] = uint8(idx % 2)
}
return ret
}
dist := distuv.Bernoulli{
P: float64(truePct) / 100.0,
Src: rand.NewSource(seed),
}
for idx := range ret {
ret[idx] = sampleVals[int(dist.Rand())]
}
return ret
}
func randomInt32(size, truePct int, sampleVals [2]int32, seed uint64) []int32 {
ret := make([]int32, size)
if truePct == alternateOrNA {
for idx := range ret {
ret[idx] = int32(idx % 2)
}
return ret
}
dist := distuv.Bernoulli{
P: float64(truePct) / 100.0,
Src: rand.NewSource(seed),
}
for idx := range ret {
ret[idx] = sampleVals[int(dist.Rand())]
}
return ret
}
func tableFromVec(dt arrow.DataType, size int, data interface{}, nullable bool, nullPct int) arrow.Table {
if !nullable && nullPct != alternateOrNA {
panic("bad check")
}
var valid []bool
if nullable {
// true values select index 1 of sample values
validBytes := randomUint8(size, nullPct, [2]uint8{1, 0}, 500)
valid = *(*[]bool)(unsafe.Pointer(&validBytes))
}
bldr := array.NewBuilder(memory.DefaultAllocator, dt)
defer bldr.Release()
switch v := data.(type) {
case []int32:
bldr.(*array.Int32Builder).AppendValues(v, valid)
case []int64:
bldr.(*array.Int64Builder).AppendValues(v, valid)
case []float32:
bldr.(*array.Float32Builder).AppendValues(v, valid)
case []float64:
bldr.(*array.Float64Builder).AppendValues(v, valid)
}
arr := bldr.NewArray()
field := arrow.Field{Name: "column", Type: dt, Nullable: nullable}
sc := arrow.NewSchema([]arrow.Field{field}, nil)
col := arrow.NewColumnFromArr(field, arr)
defer col.Release()
return array.NewTable(sc, []arrow.Column{col}, int64(size))
}
func BenchmarkWriteColumn(b *testing.B) {
int32Values := make([]int32, SIZELEN)
int64Values := make([]int64, SIZELEN)
float32Values := make([]float32, SIZELEN)
float64Values := make([]float64, SIZELEN)
for i := 0; i < SIZELEN; i++ {
int32Values[i] = 128
int64Values[i] = 128
float32Values[i] = 128
float64Values[i] = 128
}
tests := []struct {
name string
dt arrow.DataType
values interface{}
nullable bool
nbytes int64
}{
{"int32 not nullable", arrow.PrimitiveTypes.Int32, int32Values, false, int64(arrow.Int32Traits.BytesRequired(SIZELEN))},
{"int32 nullable", arrow.PrimitiveTypes.Int32, int32Values, true, int64(arrow.Int32Traits.BytesRequired(SIZELEN))},
{"int64 not nullable", arrow.PrimitiveTypes.Int64, int64Values, false, int64(arrow.Int64Traits.BytesRequired(SIZELEN))},
{"int64 nullable", arrow.PrimitiveTypes.Int64, int64Values, true, int64(arrow.Int64Traits.BytesRequired(SIZELEN))},
{"float32 not nullable", arrow.PrimitiveTypes.Float32, float32Values, false, int64(arrow.Float32Traits.BytesRequired(SIZELEN))},
{"float32 nullable", arrow.PrimitiveTypes.Float32, float32Values, true, int64(arrow.Float32Traits.BytesRequired(SIZELEN))},
{"float64 not nullable", arrow.PrimitiveTypes.Float64, float64Values, false, int64(arrow.Float64Traits.BytesRequired(SIZELEN))},
{"float64 nullable", arrow.PrimitiveTypes.Float64, float64Values, true, int64(arrow.Float64Traits.BytesRequired(SIZELEN))},
}
props := parquet.NewWriterProperties(parquet.WithDictionaryDefault(false))
arrProps := pqarrow.DefaultWriterProps()
for _, tt := range tests {
b.Run(tt.name, func(b *testing.B) {
tbl := tableFromVec(tt.dt, SIZELEN, tt.values, tt.nullable, alternateOrNA)
b.Cleanup(func() { tbl.Release() })
var buf bytes.Buffer
buf.Grow(int(tt.nbytes))
b.ResetTimer()
b.SetBytes(tt.nbytes)
for i := 0; i < b.N; i++ {
buf.Reset()
err := pqarrow.WriteTable(tbl, &buf, SIZELEN, props, arrProps)
if err != nil {
b.Error(err)
}
}
})
}
}
func benchReadTable(b *testing.B, name string, tbl arrow.Table, nbytes int64) {
props := parquet.NewWriterProperties(parquet.WithDictionaryDefault(false))
arrProps := pqarrow.DefaultWriterProps()
var buf bytes.Buffer
if err := pqarrow.WriteTable(tbl, &buf, SIZELEN, props, arrProps); err != nil {
b.Error(err)
}
ctx := context.Background()
b.ResetTimer()
b.Run(name, func(b *testing.B) {
b.SetBytes(nbytes)
for i := 0; i < b.N; i++ {
pf, err := file.NewParquetReader(bytes.NewReader(buf.Bytes()))
if err != nil {
b.Error(err)
}
reader, err := pqarrow.NewFileReader(pf, pqarrow.ArrowReadProperties{}, memory.DefaultAllocator)
if err != nil {
b.Error(err)
}
tbl, err := reader.ReadTable(ctx)
if err != nil {
b.Error(err)
}
defer tbl.Release()
}
})
}
func BenchmarkReadColumnInt32(b *testing.B) {
tests := []struct {
name string
nullable bool
nullPct int
fvPct int
}{
{"int32 not null 1pct", false, alternateOrNA, 1},
{"int32 not null 10pct", false, alternateOrNA, 10},
{"int32 not null 50pct", false, alternateOrNA, 50},
{"int32 nullable alt", true, alternateOrNA, 0},
{"int32 nullable 1pct 1pct", true, 1, 1},
{"int32 nullable 10pct 10pct", true, 10, 10},
{"int32 nullable 25pct 5pct", true, 25, 5},
{"int32 nullable 50pct 50pct", true, 50, 50},
{"int32 nullable 50pct 0pct", true, 50, 0},
{"int32 nullable 99pct 50pct", true, 99, 50},
{"int32 nullable 99pct 0pct", true, 99, 0},
}
for _, tt := range tests {
values := randomInt32(SIZELEN, tt.fvPct, [2]int32{127, 128}, 500)
tbl := tableFromVec(arrow.PrimitiveTypes.Int32, SIZELEN, values, tt.nullable, tt.nullPct)
benchReadTable(b, tt.name, tbl, int64(arrow.Int32Traits.BytesRequired(SIZELEN)))
}
}
func BenchmarkReadColumnInt64(b *testing.B) {
tests := []struct {
name string
nullable bool
nullPct int
fvPct int
}{
{"int64 not null 1pct", false, alternateOrNA, 1},
{"int64 not null 10pct", false, alternateOrNA, 10},
{"int64 not null 50pct", false, alternateOrNA, 50},
{"int64 nullable alt", true, alternateOrNA, 0},
{"int64 nullable 1pct 1pct", true, 1, 1},
{"int64 nullable 5pct 5pct", true, 5, 5},
{"int64 nullable 10pct 5pct", true, 10, 5},
{"int64 nullable 25pct 10pct", true, 25, 10},
{"int64 nullable 30pct 10pct", true, 30, 10},
{"int64 nullable 35pct 10pct", true, 35, 10},
{"int64 nullable 45pct 25pct", true, 45, 25},
{"int64 nullable 50pct 50pct", true, 50, 50},
{"int64 nullable 50pct 1pct", true, 50, 1},
{"int64 nullable 75pct 1pct", true, 75, 1},
{"int64 nullable 99pct 50pct", true, 99, 50},
{"int64 nullable 99pct 0pct", true, 99, 0},
}
for _, tt := range tests {
values := randomInt32(SIZELEN, tt.fvPct, [2]int32{127, 128}, 500)
tbl := tableFromVec(arrow.PrimitiveTypes.Int32, SIZELEN, values, tt.nullable, tt.nullPct)
benchReadTable(b, tt.name, tbl, int64(arrow.Int32Traits.BytesRequired(SIZELEN)))
}
}
func BenchmarkReadColumnFloat64(b *testing.B) {
tests := []struct {
name string
nullable bool
nullPct int
fvPct int
}{
{"double not null 1pct", false, alternateOrNA, 0},
{"double not null 20pct", false, alternateOrNA, 20},
{"double nullable alt", true, alternateOrNA, 0},
{"double nullable 10pct 50pct", true, 10, 50},
{"double nullable 25pct 25pct", true, 25, 25},
}
for _, tt := range tests {
values := randomInt32(SIZELEN, tt.fvPct, [2]int32{127, 128}, 500)
tbl := tableFromVec(arrow.PrimitiveTypes.Int32, SIZELEN, values, tt.nullable, tt.nullPct)
benchReadTable(b, tt.name, tbl, int64(arrow.Int32Traits.BytesRequired(SIZELEN)))
}
}
var compressTestCases = []struct {
c compress.Compression
}{
{compress.Codecs.Uncompressed},
{compress.Codecs.Snappy},
{compress.Codecs.Gzip},
{compress.Codecs.Brotli},
{compress.Codecs.Zstd},
{compress.Codecs.Lz4Raw},
// {compress.Codecs.Lzo},
}
func buildTableForTest(mem memory.Allocator) arrow.Table {
schema := arrow.NewSchema(
[]arrow.Field{
{Name: "int64s", Type: arrow.PrimitiveTypes.Int64},
{Name: "strings", Type: arrow.BinaryTypes.String},
{Name: "bools", Type: arrow.FixedWidthTypes.Boolean},
{Name: "repeated_int64s", Type: arrow.PrimitiveTypes.Int64},
{Name: "repeated_strings", Type: arrow.BinaryTypes.String},
{Name: "repeated_bools", Type: arrow.FixedWidthTypes.Boolean},
},
nil,
)
bldr := array.NewRecordBuilder(mem, schema)
defer bldr.Release()
for i := 0; i < SIZELEN; i++ {
bldr.Field(0).(*array.Int64Builder).Append(int64(i))
bldr.Field(1).(*array.StringBuilder).Append(fmt.Sprint(i))
bldr.Field(2).(*array.BooleanBuilder).Append(i%2 == 0)
bldr.Field(3).(*array.Int64Builder).Append(0)
bldr.Field(4).(*array.StringBuilder).Append("the string is the same")
bldr.Field(5).(*array.BooleanBuilder).Append(true)
}
rec := bldr.NewRecord()
return array.NewTableFromRecords(schema, []arrow.Record{rec})
}
func BenchmarkWriteTableCompressed(b *testing.B) {
mem := memory.DefaultAllocator
table := buildTableForTest(mem)
defer table.Release()
var uncompressedSize uint64
for idxCol := 0; int64(idxCol) < table.NumCols(); idxCol++ {
column := table.Column(idxCol)
for _, chunk := range column.Data().Chunks() {
uncompressedSize += chunk.Data().SizeInBytes()
}
}
var buf bytes.Buffer
buf.Grow(int(uncompressedSize))
for _, tc := range compressTestCases {
b.Run(fmt.Sprintf("codec=%s", tc.c), func(b *testing.B) {
buf.Reset()
b.ResetTimer()
b.SetBytes(int64(uncompressedSize))
for n := 0; n < b.N; n++ {
require.NoError(b,
pqarrow.WriteTable(
table,
&buf,
math.MaxInt64,
parquet.NewWriterProperties(parquet.WithAllocator(mem), parquet.WithCompression(tc.c)),
pqarrow.DefaultWriterProps(),
),
)
}
})
}
}
func BenchmarkReadTableCompressed(b *testing.B) {
ctx := context.Background()
mem := memory.DefaultAllocator
table := buildTableForTest(mem)
defer table.Release()
for _, tc := range compressTestCases {
b.Run(fmt.Sprintf("codec=%s", tc.c), func(b *testing.B) {
var buf bytes.Buffer
err := pqarrow.WriteTable(
table,
&buf,
math.MaxInt64,
parquet.NewWriterProperties(parquet.WithAllocator(mem), parquet.WithCompression(tc.c)),
pqarrow.DefaultWriterProps(),
)
require.NoError(b, err)
compressedBytes := buf.Len()
rdr := bytes.NewReader(buf.Bytes())
b.ResetTimer()
b.SetBytes(int64(compressedBytes))
for n := 0; n < b.N; n++ {
tab, err := pqarrow.ReadTable(ctx, rdr, nil, pqarrow.ArrowReadProperties{}, mem)
require.NoError(b, err)
defer tab.Release()
}
})
}
}
|