1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
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#
# This matrix was produced by "pam" Version 1.0.6 [28-Jul-93]
#
# PAM 200 substitution matrix, scale = 0.0693200
#
# Expected score = -4.12, Entropy = 0.507 bits
#
# Lowest score = -30, Highest score = 59
#
A R N D C Q E G H I L K M F P S T W Y V B Z X *
A 9 -7 0 0 -9 -3 1 4 -7 -3 -8 -6 -5 -14 4 5 5 -23 -14 1 0 -1 -1 -30
R -7 24 -1 -7 -15 4 -6 -12 5 -8 -13 12 -2 -18 -1 -2 -5 7 -17 -11 -4 -1 -4 -30
N 0 -1 10 9 -15 2 5 1 7 -8 -12 4 -8 -14 -3 3 2 -16 -8 -8 9 4 -2 -30
D 0 -7 9 16 -21 6 14 1 2 -10 -17 -1 -12 -23 -5 0 -2 -27 -17 -10 13 11 -4 -30
C -9 -15 -15 -21 41 -22 -22 -14 -14 -9 -25 -22 -22 -18 -12 -1 -10 -30 0 -8 -18 -22 -13 -30
Q -3 4 2 6 -22 18 10 -6 11 -9 -7 2 -4 -19 0 -3 -4 -20 -17 -8 4 14 -3 -30
E 1 -6 5 14 -22 10 16 0 1 -9 -14 -1 -9 -22 -4 -1 -3 -28 -17 -8 10 14 -3 -30
G 4 -12 1 1 -14 -6 0 19 -10 -12 -17 -8 -12 -19 -3 4 -1 -28 -22 -6 1 -3 -4 -30
H -7 5 7 2 -14 11 1 -10 26 -11 -9 -2 -10 -8 -2 -4 -6 -11 -1 -10 4 7 -3 -30
I -3 -8 -8 -10 -9 -9 -9 -12 -11 19 8 -8 8 3 -9 -6 0 -21 -5 14 -9 -9 -3 -30
L -8 -13 -12 -17 -25 -7 -14 -17 -9 8 22 -12 13 5 -11 -12 -8 -8 -5 6 -15 -11 -6 -30
K -6 12 4 -1 -22 2 -1 -8 -2 -8 -12 19 2 -22 -6 -1 -1 -15 -18 -11 1 0 -4 -30
M -5 -2 -8 -12 -22 -4 -9 -12 -10 8 13 2 28 -1 -9 -7 -3 -18 -12 6 -10 -7 -3 -30
F -14 -18 -14 -23 -18 -19 -22 -19 -8 3 5 -22 -1 33 -18 -13 -13 -1 23 -6 -18 -21 -10 -30
P 4 -1 -3 -5 -12 0 -4 -3 -2 -9 -11 -6 -9 -18 23 3 0 -23 -20 -6 -4 -2 -3 -30
S 5 -2 3 0 -1 -3 -1 4 -4 -6 -12 -1 -7 -13 3 8 6 -9 -11 -5 2 -2 -1 -30
T 5 -5 2 -2 -10 -4 -3 -1 -6 0 -8 -1 -3 -13 0 6 12 -21 -11 1 0 -3 -1 -30
W -23 7 -16 -27 -30 -20 -28 -28 -11 -21 -8 -15 -18 -1 -23 -9 -21 59 -2 -26 -21 -24 -17 -30
Y -14 -17 -8 -17 0 -17 -17 -22 -1 -5 -5 -18 -12 23 -20 -11 -11 -2 37 -11 -12 -17 -10 -30
V 1 -11 -8 -10 -8 -8 -8 -6 -10 14 6 -11 6 -6 -6 -5 1 -26 -11 18 -9 -8 -3 -30
B 0 -4 9 13 -18 4 10 1 4 -9 -15 1 -10 -18 -4 2 0 -21 -12 -9 12 8 -3 -30
Z -1 -1 4 11 -22 14 14 -3 7 -9 -11 0 -7 -21 -2 -2 -3 -24 -17 -8 8 14 -3 -30
X -1 -4 -2 -4 -13 -3 -3 -4 -3 -3 -6 -4 -3 -10 -3 -1 -1 -17 -10 -3 -3 -3 -4 -30
* -30 -30 -30 -30 -30 -30 -30 -30 -30 -30 -30 -30 -30 -30 -30 -30 -30 -30 -30 -30 -30 -30 -30 1
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