File: PAM90

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#
# This matrix was produced by "pam" Version 1.0.6 [28-Jul-93]
#
# PAM 90 substitution matrix, scale = ln(2)/2 = 0.346574
#
# Expected score = -2.26, Entropy = 1.30 bits
#
# Lowest score = -10, Highest score = 13
#
    A   R   N   D   C   Q   E   G   H   I   L   K   M   F   P   S   T   W   Y   V   B   Z   X   *
A   4  -4  -1  -1  -3  -2   0   0  -4  -2  -3  -3  -2  -5   0   1   1  -8  -5   0  -1  -1  -1 -10
R  -4   7  -2  -5  -5   0  -4  -5   1  -3  -5   2  -2  -6  -1  -1  -3   0  -6  -4  -3  -1  -2 -10
N  -1  -2   5   3  -6  -1   0  -1   2  -3  -4   1  -4  -5  -2   1   0  -5  -2  -4   4   0  -1 -10
D  -1  -5   3   6  -8   0   4  -1  -1  -4  -7  -2  -5  -8  -4  -1  -2  -9  -6  -4   5   3  -2 -10
C  -3  -5  -6  -8   9  -8  -8  -5  -5  -3  -9  -8  -8  -7  -5  -1  -4 -10  -1  -3  -7  -8  -5 -10
Q  -2   0  -1   0  -8   6   2  -3   2  -4  -3  -1  -2  -7  -1  -2  -3  -7  -6  -4   0   5  -2 -10
E   0  -4   0   4  -8   2   6  -1  -1  -3  -5  -2  -4  -8  -2  -2  -2 -10  -6  -3   2   5  -2 -10
G   0  -5  -1  -1  -5  -3  -1   5  -5  -5  -6  -4  -5  -6  -3   0  -2  -9  -8  -3  -1  -2  -2 -10
H  -4   1   2  -1  -5   2  -1  -5   8  -5  -3  -2  -5  -3  -2  -3  -3  -4  -1  -4   1   1  -2 -10
I  -2  -3  -3  -4  -3  -4  -3  -5  -5   6   1  -3   1   0  -4  -3   0  -8  -3   3  -3  -3  -2 -10
L  -3  -5  -4  -7  -9  -3  -5  -6  -3   1   6  -5   2   0  -4  -5  -3  -3  -3   0  -5  -4  -3 -10
K  -3   2   1  -2  -8  -1  -2  -4  -2  -3  -5   5   0  -8  -3  -1  -1  -6  -6  -5   0  -1  -2 -10
M  -2  -2  -4  -5  -8  -2  -4  -5  -5   1   2   0   9  -1  -4  -3  -2  -7  -6   1  -5  -3  -2 -10
F  -5  -6  -5  -8  -7  -7  -8  -6  -3   0   0  -8  -1   8  -6  -4  -5  -2   4  -4  -6  -8  -4 -10
P   0  -1  -2  -4  -5  -1  -2  -3  -2  -4  -4  -3  -4  -6   7   0  -1  -8  -8  -3  -3  -2  -2 -10
S   1  -1   1  -1  -1  -2  -2   0  -3  -3  -5  -1  -3  -4   0   4   2  -3  -4  -3   0  -2  -1 -10
T   1  -3   0  -2  -4  -3  -2  -2  -3   0  -3  -1  -2  -5  -1   2   5  -7  -4  -1  -1  -2  -1 -10
W  -8   0  -5  -9 -10  -7 -10  -9  -4  -8  -3  -6  -7  -2  -8  -3  -7  13  -2  -9  -7  -8  -6 -10
Y  -5  -6  -2  -6  -1  -6  -6  -8  -1  -3  -3  -6  -6   4  -8  -4  -4  -2   9  -4  -4  -6  -4 -10
V   0  -4  -4  -4  -3  -4  -3  -3  -4   3   0  -5   1  -4  -3  -3  -1  -9  -4   6  -4  -3  -2 -10
B  -1  -3   4   5  -7   0   2  -1   1  -3  -5   0  -5  -6  -3   0  -1  -7  -4  -4   4   2  -2 -10
Z  -1  -1   0   3  -8   5   5  -2   1  -3  -4  -1  -3  -8  -2  -2  -2  -8  -6  -3   2   5  -2 -10
X  -1  -2  -1  -2  -5  -2  -2  -2  -2  -2  -3  -2  -2  -4  -2  -1  -1  -6  -4  -2  -2  -2  -2 -10
* -10 -10 -10 -10 -10 -10 -10 -10 -10 -10 -10 -10 -10 -10 -10 -10 -10 -10 -10 -10 -10 -10 -10   1