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Source: golang-github-brentp-bix
Maintainer: Debian Go Packaging Team <team+pkg-go@tracker.debian.org>
Section: devel
Testsuite: autopkgtest-pkg-go
Priority: optional
Build-Depends: debhelper-compat (= 13),
dh-golang,
golang-any,
golang-github-biogo-hts-dev,
golang-github-pkg-errors-dev,
golang-gopkg-check.v1-dev,
golang-github-brentp-irelate-dev,
golang-github-brentp-vcfgo-dev,
tabix
Standards-Version: 4.7.2
Vcs-Browser: https://salsa.debian.org/go-team/packages/golang-github-brentp-bix
Vcs-Git: https://salsa.debian.org/go-team/packages/golang-github-brentp-bix.git
Homepage: https://github.com/brentp/bix
XS-Go-Import-Path: github.com/brentp/bix
Package: golang-github-brentp-bix-dev
Architecture: all
Depends: golang-github-biogo-hts-dev,
golang-github-pkg-errors-dev,
golang-gopkg-check.v1-dev,
${misc:Depends}
Description: Tabix file access with golang using biogo machinery (library)
Bixis a pure go tabix reader. Tabix has a minimum resolution of 16K
bases. So, for dense annotations like ExAC, repeated queries will have to
re-parse the same intervals. To mitigate this, Bix caches all annotations
for the blocks from each query and re-uses them for later queries to
the same block. In practice, this results in 10X-100X speedup for any
type of data.
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