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Test: Plain text
Output sequences of all apps are not wrapped to fixed length.
============================================
read file once with cat
------------------------------------
== seqkit
data: dataset_A.fa
elapsed time: 2.535
peak rss: 28332
3eac76c3c6a1e6591f04ff7bd44bbb32 dataset_A.fa.seqkit.fx
------------------------------------
== seqkit_t1
data: dataset_A.fa
elapsed time: 3.775
peak rss: 31888
3eac76c3c6a1e6591f04ff7bd44bbb32 dataset_A.fa.seqkit.fx
------------------------------------
== seqtk
data: dataset_A.fa
elapsed time: 2.767
peak rss: 7684
3eac76c3c6a1e6591f04ff7bd44bbb32 dataset_A.fa.seqtk.fx
read file once with cat
------------------------------------
== seqkit
data: dataset_B.fa
elapsed time: 3.108
peak rss: 1039000
af9e765363ffe03aaaaa0a23509f7b32 dataset_B.fa.seqkit.fx
------------------------------------
== seqkit_t1
data: dataset_B.fa
elapsed time: 3.225
peak rss: 1037696
af9e765363ffe03aaaaa0a23509f7b32 dataset_B.fa.seqkit.fx
------------------------------------
== seqtk
data: dataset_B.fa
elapsed time: 3.106
peak rss: 244940
af9e765363ffe03aaaaa0a23509f7b32 dataset_B.fa.seqtk.fx
read file once with cat
------------------------------------
== seqkit
data: dataset_C.fq
elapsed time: 3.216
peak rss: 24560
f01c87fd0f852d6ec378fab0d58952ad dataset_C.fq.seqkit.fx
------------------------------------
== seqkit_t1
data: dataset_C.fq
elapsed time: 3.795
peak rss: 14192
f01c87fd0f852d6ec378fab0d58952ad dataset_C.fq.seqkit.fx
------------------------------------
== seqtk
data: dataset_C.fq
elapsed time: 4.152
peak rss: 1028
f01c87fd0f852d6ec378fab0d58952ad dataset_C.fq.seqtk.fx
|
