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Test: Plain text
Output sequences of all apps are not wrapped to fixed length.
============================================
read file once with cat
------------------------------------
== seqkit
data: dataset_A.fa
elapsed time: 2.540
peak rss: 27520
3eac76c3c6a1e6591f04ff7bd44bbb32 dataset_A.fa.seqkit.fx
------------------------------------
== seqkit_t1
data: dataset_A.fa
elapsed time: 3.961
peak rss: 27884
3eac76c3c6a1e6591f04ff7bd44bbb32 dataset_A.fa.seqkit.fx
------------------------------------
== seqtk
data: dataset_A.fa
elapsed time: 2.764
peak rss: 7668
3eac76c3c6a1e6591f04ff7bd44bbb32 dataset_A.fa.seqtk.fx
read file once with cat
------------------------------------
== seqkit
data: dataset_B.fa
elapsed time: 3.209
peak rss: 1037848
af9e765363ffe03aaaaa0a23509f7b32 dataset_B.fa.seqkit.fx
------------------------------------
== seqkit_t1
data: dataset_B.fa
elapsed time: 3.347
peak rss: 1038660
af9e765363ffe03aaaaa0a23509f7b32 dataset_B.fa.seqkit.fx
------------------------------------
== seqtk
data: dataset_B.fa
elapsed time: 3.200
peak rss: 244944
af9e765363ffe03aaaaa0a23509f7b32 dataset_B.fa.seqtk.fx
read file once with cat
------------------------------------
== seqkit
data: dataset_C.fq
elapsed time: 3.226
peak rss: 14296
f01c87fd0f852d6ec378fab0d58952ad dataset_C.fq.seqkit.fx
------------------------------------
== seqkit_t1
data: dataset_C.fq
elapsed time: 4.152
peak rss: 14288
f01c87fd0f852d6ec378fab0d58952ad dataset_C.fq.seqkit.fx
------------------------------------
== seqtk
data: dataset_C.fq
elapsed time: 4.259
peak rss: 1028
f01c87fd0f852d6ec378fab0d58952ad dataset_C.fq.seqtk.fx
|
