File: run_benchmark_02_gzip.sh.benchmark.tsv

package info (click to toggle)
golang-github-shenwei356-bio 0.13.8-1
  • links: PTS, VCS
  • area: main
  • in suites: forky, sid
  • size: 792 kB
  • sloc: perl: 114; sh: 58; makefile: 21
file content (49 lines) | stat: -rw-r--r-- 2,626 bytes parent folder | download | duplicates (3)
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
test	dataset	app	time	mem
Gzip compressed	dataset_A.fa.gz	seqkit	14.27	57764
Gzip compressed	dataset_A.fa.gz	seqkit	14.38	58748
Gzip compressed	dataset_A.fa.gz	seqkit	14.45	55004
Gzip compressed	dataset_A.fa.gz	seqkit	14.49	57792
Gzip compressed	dataset_A.fa.gz	seqkit_t1	41.86	42856
Gzip compressed	dataset_A.fa.gz	seqkit_t1	41.43	43884
Gzip compressed	dataset_A.fa.gz	seqkit_t1	42.50	41936
Gzip compressed	dataset_A.fa.gz	seqkit_t1	40.89	44064
Gzip compressed	dataset_A.fa.gz	seqtk+gzip	461.54	7700
Gzip compressed	dataset_A.fa.gz	seqtk+gzip	460.74	7820
Gzip compressed	dataset_A.fa.gz	seqtk+gzip	461.59	7748
Gzip compressed	dataset_A.fa.gz	seqtk+gzip	459.01	7800
Gzip compressed	dataset_A.fa.gz	seqtk+pigz	118.43	7748
Gzip compressed	dataset_A.fa.gz	seqtk+pigz	117.57	7664
Gzip compressed	dataset_A.fa.gz	seqtk+pigz	120.28	7696
Gzip compressed	dataset_A.fa.gz	seqtk+pigz	119.26	7724
Gzip compressed	dataset_B.fa.gz	seqkit	25.37	1045592
Gzip compressed	dataset_B.fa.gz	seqkit	25.05	1044708
Gzip compressed	dataset_B.fa.gz	seqkit	25.81	1042072
Gzip compressed	dataset_B.fa.gz	seqkit	25.46	1045288
Gzip compressed	dataset_B.fa.gz	seqkit_t1	46.53	1043316
Gzip compressed	dataset_B.fa.gz	seqkit_t1	46.19	1041472
Gzip compressed	dataset_B.fa.gz	seqkit_t1	46.30	1041008
Gzip compressed	dataset_B.fa.gz	seqkit_t1	46.80	1042332
Gzip compressed	dataset_B.fa.gz	seqtk+gzip	457.71	245104
Gzip compressed	dataset_B.fa.gz	seqtk+gzip	461.24	245072
Gzip compressed	dataset_B.fa.gz	seqtk+gzip	463.54	245164
Gzip compressed	dataset_B.fa.gz	seqtk+gzip	467.39	245208
Gzip compressed	dataset_B.fa.gz	seqtk+pigz	128.74	245028
Gzip compressed	dataset_B.fa.gz	seqtk+pigz	126.62	245100
Gzip compressed	dataset_B.fa.gz	seqtk+pigz	128.22	245076
Gzip compressed	dataset_B.fa.gz	seqtk+pigz	130.17	245100
Gzip compressed	dataset_C.fq.gz	seqkit	9.05	40948
Gzip compressed	dataset_C.fq.gz	seqkit	8.87	41016
Gzip compressed	dataset_C.fq.gz	seqkit	9.23	38484
Gzip compressed	dataset_C.fq.gz	seqkit	9.05	39380
Gzip compressed	dataset_C.fq.gz	seqkit_t1	31.18	30100
Gzip compressed	dataset_C.fq.gz	seqkit_t1	30.59	29512
Gzip compressed	dataset_C.fq.gz	seqkit_t1	30.50	29052
Gzip compressed	dataset_C.fq.gz	seqkit_t1	30.66	29424
Gzip compressed	dataset_C.fq.gz	seqtk+gzip	188.89	1024
Gzip compressed	dataset_C.fq.gz	seqtk+gzip	190.83	1080
Gzip compressed	dataset_C.fq.gz	seqtk+gzip	190.95	964
Gzip compressed	dataset_C.fq.gz	seqtk+gzip	191.15	968
Gzip compressed	dataset_C.fq.gz	seqtk+pigz	49.13	1080
Gzip compressed	dataset_C.fq.gz	seqtk+pigz	48.17	968
Gzip compressed	dataset_C.fq.gz	seqtk+pigz	48.11	1032
Gzip compressed	dataset_C.fq.gz	seqtk+pigz	49.28	964