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|
#! /bin/sh /usr/share/dpatch/dpatch-run
## mpi-build.dpatch by <gerber@delft.vdg.net>
##
## All lines beginning with `## DP:' are a description of the patch.
## DP: Adapts Makefile for out-of-src build, exclusively links to libgpiv3 or
## DP: to libgpiv3-mpi, so both libraries may be installed simultaneously
## DP: while building the gpivtools(-mpi) packages, removes double nprocs
## DP: declaration when enabled hybried parallel code, extended --help when
## DP: mpi enabled
@DPATCH@
diff -urNad gpivtools-0.6.0~/Makefile.in gpivtools-0.6.0/Makefile.in
--- gpivtools-0.6.0~/Makefile.in 2009-03-09 09:33:31.000000000 +0100
+++ gpivtools-0.6.0/Makefile.in 2009-03-09 09:39:12.000000000 +0100
@@ -36,8 +36,8 @@
subdir = .
DIST_COMMON = README $(am__configure_deps) $(srcdir)/Makefile.am \
$(srcdir)/Makefile.in $(srcdir)/config.h.in \
- $(top_srcdir)/configure COPYING ChangeLog INSTALL config.guess \
- config.sub depcomp install-sh missing mkinstalldirs
+ $(top_srcdir)/configure COPYING ChangeLog INSTALL depcomp \
+ install-sh missing mkinstalldirs
ACLOCAL_M4 = $(top_srcdir)/aclocal.m4
am__aclocal_m4_deps = $(top_srcdir)/config/acx_mpi.m4 \
$(top_srcdir)/configure.in
diff -urNad gpivtools-0.6.0~/bootstrap gpivtools-0.6.0/bootstrap
--- gpivtools-0.6.0~/bootstrap 1970-01-01 01:00:00.000000000 +0100
+++ gpivtools-0.6.0/bootstrap 2009-03-09 09:39:40.000000000 +0100
@@ -0,0 +1,27 @@
+#! /bin/sh
+# bootstrap -- Use this script to create generated files from the CVS dist
+# Copyright (C) 2000 Gary V. Vaughan
+#
+# This program is free software; you can redistribute it and/or modify
+# it under the terms of the GNU General Public License as published by
+# the Free Software Foundation; either version 2, or (at your option)
+# any later version.
+#
+# This program is distributed in the hope that it will be useful,
+# but WITHOUT ANY WARRANTY; without even the implied warranty of
+# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
+# GNU General Public License for more details.
+#
+# You should have received a copy of the GNU General Public License
+# along with this program; if not, write to the Free Software
+# Foundation, Inc., 675 Mass Ave, Cambridge, MA 02139, USA.
+
+## @start 1
+#! /bin/sh
+
+set -x
+aclocal -I config
+autoheader
+automake --foreign --add-missing --copy
+autoconf
+## @end 1
\ No newline at end of file
diff -urNad gpivtools-0.6.0~/config.h.in gpivtools-0.6.0/config.h.in
--- gpivtools-0.6.0~/config.h.in 2009-03-09 09:33:31.000000000 +0100
+++ gpivtools-0.6.0/config.h.in 2009-03-09 09:39:12.000000000 +0100
@@ -42,6 +42,9 @@
/* Define to 1 if you have the `gpiv' library (-lgpiv). */
#undef HAVE_LIBGPIV
+/* Define to 1 if you have the `gpiv_mpi' library (-lgpiv_mpi). */
+#undef HAVE_LIBGPIV_MPI
+
/* Define to 1 if you have the `gsl' library (-lgsl). */
#undef HAVE_LIBGSL
diff -urNad gpivtools-0.6.0~/configure gpivtools-0.6.0/configure
--- gpivtools-0.6.0~/configure 2009-03-09 09:33:31.000000000 +0100
+++ gpivtools-0.6.0/configure 2009-03-09 09:39:12.000000000 +0100
@@ -712,6 +712,10 @@
PLOTMTV
HAVE_PLOTMTV_TRUE
HAVE_PLOTMTV_FALSE
+ENABLE_MPI
+MPICC
+MPILIBS
+MPIPYTHON
ENABLE_CAM
ENABLE_TRIG
CONTROL
@@ -719,10 +723,6 @@
HAVE_CONTROL_FALSE
RTA_TOPDIR
K_TOPDIR
-ENABLE_MPI
-MPICC
-MPILIBS
-MPIPYTHON
HAVE_MPIPYTHON_TRUE
HAVE_MPIPYTHON_FALSE
BUILD_MPI_TRUE
@@ -1321,13 +1321,13 @@
--enable-dependency-tracking do not reject slow dependency extractors
--enable-maintainer-mode enable make rules and dependencies not useful
(and sometimes confusing) to the casual installer
+ --enable-mpi enable Message Protocol Interface (MPI)
--enable-cam enable (IEEE-1394) camera
--enable-trig enable (realtime) triggering
--disable-rta=RTATOPDIR place where the RTAI code \
resides (default /usr/lib/realtime)
--enable-k=KTOPDIR place where the installed kernel \
headers resides (default /usr/src/kernel-headers-2.4.27-adeos)
- --enable-mpi enable Message Protocol Interface (MPI)
--enable-omp enable Open Multi-Processing (OMP)
Some influential environment variables:
@@ -6953,6 +6953,684 @@
+
+# Check whether --enable-mpi was given.
+if test "${enable_mpi+set}" = set; then
+ enableval=$enable_mpi; ENABLE_MPI="-DENABLE_MPI"
+
+fi
+
+
+
+
+if test "${ENABLE_MPI}" == '-DENABLE_MPI'; then
+
+
+
+
+
+ for ac_prog in mpicc hcc mpcc mpcc_r mpxlc cmpicc
+do
+ # Extract the first word of "$ac_prog", so it can be a program name with args.
+set dummy $ac_prog; ac_word=$2
+{ echo "$as_me:$LINENO: checking for $ac_word" >&5
+echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6; }
+if test "${ac_cv_prog_MPICC+set}" = set; then
+ echo $ECHO_N "(cached) $ECHO_C" >&6
+else
+ if test -n "$MPICC"; then
+ ac_cv_prog_MPICC="$MPICC" # Let the user override the test.
+else
+as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+for as_dir in $PATH
+do
+ IFS=$as_save_IFS
+ test -z "$as_dir" && as_dir=.
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
+ ac_cv_prog_MPICC="$ac_prog"
+ echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
+ break 2
+ fi
+done
+done
+IFS=$as_save_IFS
+
+fi
+fi
+MPICC=$ac_cv_prog_MPICC
+if test -n "$MPICC"; then
+ { echo "$as_me:$LINENO: result: $MPICC" >&5
+echo "${ECHO_T}$MPICC" >&6; }
+else
+ { echo "$as_me:$LINENO: result: no" >&5
+echo "${ECHO_T}no" >&6; }
+fi
+
+
+ test -n "$MPICC" && break
+done
+test -n "$MPICC" || MPICC="$CC"
+
+ acx_mpi_save_CC="$CC"
+ CC="$MPICC"
+
+
+
+if test x = x"$MPILIBS"; then
+ { echo "$as_me:$LINENO: checking for MPI_Init" >&5
+echo $ECHO_N "checking for MPI_Init... $ECHO_C" >&6; }
+if test "${ac_cv_func_MPI_Init+set}" = set; then
+ echo $ECHO_N "(cached) $ECHO_C" >&6
+else
+ cat >conftest.$ac_ext <<_ACEOF
+/* confdefs.h. */
+_ACEOF
+cat confdefs.h >>conftest.$ac_ext
+cat >>conftest.$ac_ext <<_ACEOF
+/* end confdefs.h. */
+/* Define MPI_Init to an innocuous variant, in case <limits.h> declares MPI_Init.
+ For example, HP-UX 11i <limits.h> declares gettimeofday. */
+#define MPI_Init innocuous_MPI_Init
+
+/* System header to define __stub macros and hopefully few prototypes,
+ which can conflict with char MPI_Init (); below.
+ Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
+ <limits.h> exists even on freestanding compilers. */
+
+#ifdef __STDC__
+# include <limits.h>
+#else
+# include <assert.h>
+#endif
+
+#undef MPI_Init
+
+/* Override any GCC internal prototype to avoid an error.
+ Use char because int might match the return type of a GCC
+ builtin and then its argument prototype would still apply. */
+#ifdef __cplusplus
+extern "C"
+#endif
+char MPI_Init ();
+/* The GNU C library defines this for functions which it implements
+ to always fail with ENOSYS. Some functions are actually named
+ something starting with __ and the normal name is an alias. */
+#if defined __stub_MPI_Init || defined __stub___MPI_Init
+choke me
+#endif
+
+int
+main ()
+{
+return MPI_Init ();
+ ;
+ return 0;
+}
+_ACEOF
+rm -f conftest.$ac_objext conftest$ac_exeext
+if { (ac_try="$ac_link"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval "echo \"\$as_me:$LINENO: $ac_try_echo\"") >&5
+ (eval "$ac_link") 2>conftest.er1
+ ac_status=$?
+ grep -v '^ *+' conftest.er1 >conftest.err
+ rm -f conftest.er1
+ cat conftest.err >&5
+ echo "$as_me:$LINENO: \$? = $ac_status" >&5
+ (exit $ac_status); } && {
+ test -z "$ac_c_werror_flag" ||
+ test ! -s conftest.err
+ } && test -s conftest$ac_exeext &&
+ $as_test_x conftest$ac_exeext; then
+ ac_cv_func_MPI_Init=yes
+else
+ echo "$as_me: failed program was:" >&5
+sed 's/^/| /' conftest.$ac_ext >&5
+
+ ac_cv_func_MPI_Init=no
+fi
+
+rm -f core conftest.err conftest.$ac_objext conftest_ipa8_conftest.oo \
+ conftest$ac_exeext conftest.$ac_ext
+fi
+{ echo "$as_me:$LINENO: result: $ac_cv_func_MPI_Init" >&5
+echo "${ECHO_T}$ac_cv_func_MPI_Init" >&6; }
+if test $ac_cv_func_MPI_Init = yes; then
+ MPILIBS=" "
+fi
+
+fi
+if test x = x"$MPILIBS"; then
+ { echo "$as_me:$LINENO: checking for MPI_Init in -lmpi" >&5
+echo $ECHO_N "checking for MPI_Init in -lmpi... $ECHO_C" >&6; }
+if test "${ac_cv_lib_mpi_MPI_Init+set}" = set; then
+ echo $ECHO_N "(cached) $ECHO_C" >&6
+else
+ ac_check_lib_save_LIBS=$LIBS
+LIBS="-lmpi $LIBS"
+cat >conftest.$ac_ext <<_ACEOF
+/* confdefs.h. */
+_ACEOF
+cat confdefs.h >>conftest.$ac_ext
+cat >>conftest.$ac_ext <<_ACEOF
+/* end confdefs.h. */
+
+/* Override any GCC internal prototype to avoid an error.
+ Use char because int might match the return type of a GCC
+ builtin and then its argument prototype would still apply. */
+#ifdef __cplusplus
+extern "C"
+#endif
+char MPI_Init ();
+int
+main ()
+{
+return MPI_Init ();
+ ;
+ return 0;
+}
+_ACEOF
+rm -f conftest.$ac_objext conftest$ac_exeext
+if { (ac_try="$ac_link"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval "echo \"\$as_me:$LINENO: $ac_try_echo\"") >&5
+ (eval "$ac_link") 2>conftest.er1
+ ac_status=$?
+ grep -v '^ *+' conftest.er1 >conftest.err
+ rm -f conftest.er1
+ cat conftest.err >&5
+ echo "$as_me:$LINENO: \$? = $ac_status" >&5
+ (exit $ac_status); } && {
+ test -z "$ac_c_werror_flag" ||
+ test ! -s conftest.err
+ } && test -s conftest$ac_exeext &&
+ $as_test_x conftest$ac_exeext; then
+ ac_cv_lib_mpi_MPI_Init=yes
+else
+ echo "$as_me: failed program was:" >&5
+sed 's/^/| /' conftest.$ac_ext >&5
+
+ ac_cv_lib_mpi_MPI_Init=no
+fi
+
+rm -f core conftest.err conftest.$ac_objext conftest_ipa8_conftest.oo \
+ conftest$ac_exeext conftest.$ac_ext
+LIBS=$ac_check_lib_save_LIBS
+fi
+{ echo "$as_me:$LINENO: result: $ac_cv_lib_mpi_MPI_Init" >&5
+echo "${ECHO_T}$ac_cv_lib_mpi_MPI_Init" >&6; }
+if test $ac_cv_lib_mpi_MPI_Init = yes; then
+ MPILIBS="-lmpi"
+fi
+
+fi
+if test x = x"$MPILIBS"; then
+ { echo "$as_me:$LINENO: checking for MPI_Init in -lmpich" >&5
+echo $ECHO_N "checking for MPI_Init in -lmpich... $ECHO_C" >&6; }
+if test "${ac_cv_lib_mpich_MPI_Init+set}" = set; then
+ echo $ECHO_N "(cached) $ECHO_C" >&6
+else
+ ac_check_lib_save_LIBS=$LIBS
+LIBS="-lmpich $LIBS"
+cat >conftest.$ac_ext <<_ACEOF
+/* confdefs.h. */
+_ACEOF
+cat confdefs.h >>conftest.$ac_ext
+cat >>conftest.$ac_ext <<_ACEOF
+/* end confdefs.h. */
+
+/* Override any GCC internal prototype to avoid an error.
+ Use char because int might match the return type of a GCC
+ builtin and then its argument prototype would still apply. */
+#ifdef __cplusplus
+extern "C"
+#endif
+char MPI_Init ();
+int
+main ()
+{
+return MPI_Init ();
+ ;
+ return 0;
+}
+_ACEOF
+rm -f conftest.$ac_objext conftest$ac_exeext
+if { (ac_try="$ac_link"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval "echo \"\$as_me:$LINENO: $ac_try_echo\"") >&5
+ (eval "$ac_link") 2>conftest.er1
+ ac_status=$?
+ grep -v '^ *+' conftest.er1 >conftest.err
+ rm -f conftest.er1
+ cat conftest.err >&5
+ echo "$as_me:$LINENO: \$? = $ac_status" >&5
+ (exit $ac_status); } && {
+ test -z "$ac_c_werror_flag" ||
+ test ! -s conftest.err
+ } && test -s conftest$ac_exeext &&
+ $as_test_x conftest$ac_exeext; then
+ ac_cv_lib_mpich_MPI_Init=yes
+else
+ echo "$as_me: failed program was:" >&5
+sed 's/^/| /' conftest.$ac_ext >&5
+
+ ac_cv_lib_mpich_MPI_Init=no
+fi
+
+rm -f core conftest.err conftest.$ac_objext conftest_ipa8_conftest.oo \
+ conftest$ac_exeext conftest.$ac_ext
+LIBS=$ac_check_lib_save_LIBS
+fi
+{ echo "$as_me:$LINENO: result: $ac_cv_lib_mpich_MPI_Init" >&5
+echo "${ECHO_T}$ac_cv_lib_mpich_MPI_Init" >&6; }
+if test $ac_cv_lib_mpich_MPI_Init = yes; then
+ MPILIBS="-lmpich"
+fi
+
+fi
+
+if test x != x"$MPILIBS"; then
+ { echo "$as_me:$LINENO: checking for mpi.h" >&5
+echo $ECHO_N "checking for mpi.h... $ECHO_C" >&6; }
+ cat >conftest.$ac_ext <<_ACEOF
+/* confdefs.h. */
+_ACEOF
+cat confdefs.h >>conftest.$ac_ext
+cat >>conftest.$ac_ext <<_ACEOF
+/* end confdefs.h. */
+#include <mpi.h>
+int
+main ()
+{
+
+ ;
+ return 0;
+}
+_ACEOF
+rm -f conftest.$ac_objext
+if { (ac_try="$ac_compile"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval "echo \"\$as_me:$LINENO: $ac_try_echo\"") >&5
+ (eval "$ac_compile") 2>conftest.er1
+ ac_status=$?
+ grep -v '^ *+' conftest.er1 >conftest.err
+ rm -f conftest.er1
+ cat conftest.err >&5
+ echo "$as_me:$LINENO: \$? = $ac_status" >&5
+ (exit $ac_status); } && {
+ test -z "$ac_c_werror_flag" ||
+ test ! -s conftest.err
+ } && test -s conftest.$ac_objext; then
+ { echo "$as_me:$LINENO: result: yes" >&5
+echo "${ECHO_T}yes" >&6; }
+else
+ echo "$as_me: failed program was:" >&5
+sed 's/^/| /' conftest.$ac_ext >&5
+
+ MPILIBS=""
+ { echo "$as_me:$LINENO: result: no" >&5
+echo "${ECHO_T}no" >&6; }
+fi
+
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+fi
+
+CC="$acx_mpi_save_CC"
+
+
+
+# Finally, execute ACTION-IF-FOUND/ACTION-IF-NOT-FOUND:
+if test x = x"$MPILIBS"; then
+ { { echo "$as_me:$LINENO: error: \"libmpi IS NOT installed\"" >&5
+echo "$as_me: error: \"libmpi IS NOT installed\"" >&2;}
+ { (exit 1); exit 1; }; }
+ :
+else
+ { echo "$as_me:$LINENO: WARNING: \"libmpi HAS BEEN installed\"" >&5
+echo "$as_me: WARNING: \"libmpi HAS BEEN installed\"" >&2;}
+ :
+fi
+
+
+ CC="$MPICC"
+ LIBS="$MPILIBS $LIBS"
+
+
+{ echo "$as_me:$LINENO: checking for main in -lmpi" >&5
+echo $ECHO_N "checking for main in -lmpi... $ECHO_C" >&6; }
+if test "${ac_cv_lib_mpi_main+set}" = set; then
+ echo $ECHO_N "(cached) $ECHO_C" >&6
+else
+ ac_check_lib_save_LIBS=$LIBS
+LIBS="-lmpi $LIBS"
+cat >conftest.$ac_ext <<_ACEOF
+/* confdefs.h. */
+_ACEOF
+cat confdefs.h >>conftest.$ac_ext
+cat >>conftest.$ac_ext <<_ACEOF
+/* end confdefs.h. */
+
+
+int
+main ()
+{
+return main ();
+ ;
+ return 0;
+}
+_ACEOF
+rm -f conftest.$ac_objext conftest$ac_exeext
+if { (ac_try="$ac_link"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval "echo \"\$as_me:$LINENO: $ac_try_echo\"") >&5
+ (eval "$ac_link") 2>conftest.er1
+ ac_status=$?
+ grep -v '^ *+' conftest.er1 >conftest.err
+ rm -f conftest.er1
+ cat conftest.err >&5
+ echo "$as_me:$LINENO: \$? = $ac_status" >&5
+ (exit $ac_status); } && {
+ test -z "$ac_c_werror_flag" ||
+ test ! -s conftest.err
+ } && test -s conftest$ac_exeext &&
+ $as_test_x conftest$ac_exeext; then
+ ac_cv_lib_mpi_main=yes
+else
+ echo "$as_me: failed program was:" >&5
+sed 's/^/| /' conftest.$ac_ext >&5
+
+ ac_cv_lib_mpi_main=no
+fi
+
+rm -f core conftest.err conftest.$ac_objext conftest_ipa8_conftest.oo \
+ conftest$ac_exeext conftest.$ac_ext
+LIBS=$ac_check_lib_save_LIBS
+fi
+{ echo "$as_me:$LINENO: result: $ac_cv_lib_mpi_main" >&5
+echo "${ECHO_T}$ac_cv_lib_mpi_main" >&6; }
+if test $ac_cv_lib_mpi_main = yes; then
+ cat >>confdefs.h <<_ACEOF
+#define HAVE_LIBMPI 1
+_ACEOF
+
+ LIBS="-lmpi $LIBS"
+
+else
+ { { echo "$as_me:$LINENO: error: \"libmpi not installed\"" >&5
+echo "$as_me: error: \"libmpi not installed\"" >&2;}
+ { (exit 1); exit 1; }; }
+fi
+
+ if test "${ac_cv_header_mpi_h+set}" = set; then
+ { echo "$as_me:$LINENO: checking for mpi.h" >&5
+echo $ECHO_N "checking for mpi.h... $ECHO_C" >&6; }
+if test "${ac_cv_header_mpi_h+set}" = set; then
+ echo $ECHO_N "(cached) $ECHO_C" >&6
+fi
+{ echo "$as_me:$LINENO: result: $ac_cv_header_mpi_h" >&5
+echo "${ECHO_T}$ac_cv_header_mpi_h" >&6; }
+else
+ # Is the header compilable?
+{ echo "$as_me:$LINENO: checking mpi.h usability" >&5
+echo $ECHO_N "checking mpi.h usability... $ECHO_C" >&6; }
+cat >conftest.$ac_ext <<_ACEOF
+/* confdefs.h. */
+_ACEOF
+cat confdefs.h >>conftest.$ac_ext
+cat >>conftest.$ac_ext <<_ACEOF
+/* end confdefs.h. */
+$ac_includes_default
+#include <mpi.h>
+_ACEOF
+rm -f conftest.$ac_objext
+if { (ac_try="$ac_compile"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval "echo \"\$as_me:$LINENO: $ac_try_echo\"") >&5
+ (eval "$ac_compile") 2>conftest.er1
+ ac_status=$?
+ grep -v '^ *+' conftest.er1 >conftest.err
+ rm -f conftest.er1
+ cat conftest.err >&5
+ echo "$as_me:$LINENO: \$? = $ac_status" >&5
+ (exit $ac_status); } && {
+ test -z "$ac_c_werror_flag" ||
+ test ! -s conftest.err
+ } && test -s conftest.$ac_objext; then
+ ac_header_compiler=yes
+else
+ echo "$as_me: failed program was:" >&5
+sed 's/^/| /' conftest.$ac_ext >&5
+
+ ac_header_compiler=no
+fi
+
+rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
+{ echo "$as_me:$LINENO: result: $ac_header_compiler" >&5
+echo "${ECHO_T}$ac_header_compiler" >&6; }
+
+# Is the header present?
+{ echo "$as_me:$LINENO: checking mpi.h presence" >&5
+echo $ECHO_N "checking mpi.h presence... $ECHO_C" >&6; }
+cat >conftest.$ac_ext <<_ACEOF
+/* confdefs.h. */
+_ACEOF
+cat confdefs.h >>conftest.$ac_ext
+cat >>conftest.$ac_ext <<_ACEOF
+/* end confdefs.h. */
+#include <mpi.h>
+_ACEOF
+if { (ac_try="$ac_cpp conftest.$ac_ext"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval "echo \"\$as_me:$LINENO: $ac_try_echo\"") >&5
+ (eval "$ac_cpp conftest.$ac_ext") 2>conftest.er1
+ ac_status=$?
+ grep -v '^ *+' conftest.er1 >conftest.err
+ rm -f conftest.er1
+ cat conftest.err >&5
+ echo "$as_me:$LINENO: \$? = $ac_status" >&5
+ (exit $ac_status); } >/dev/null && {
+ test -z "$ac_c_preproc_warn_flag$ac_c_werror_flag" ||
+ test ! -s conftest.err
+ }; then
+ ac_header_preproc=yes
+else
+ echo "$as_me: failed program was:" >&5
+sed 's/^/| /' conftest.$ac_ext >&5
+
+ ac_header_preproc=no
+fi
+
+rm -f conftest.err conftest.$ac_ext
+{ echo "$as_me:$LINENO: result: $ac_header_preproc" >&5
+echo "${ECHO_T}$ac_header_preproc" >&6; }
+
+# So? What about this header?
+case $ac_header_compiler:$ac_header_preproc:$ac_c_preproc_warn_flag in
+ yes:no: )
+ { echo "$as_me:$LINENO: WARNING: mpi.h: accepted by the compiler, rejected by the preprocessor!" >&5
+echo "$as_me: WARNING: mpi.h: accepted by the compiler, rejected by the preprocessor!" >&2;}
+ { echo "$as_me:$LINENO: WARNING: mpi.h: proceeding with the compiler's result" >&5
+echo "$as_me: WARNING: mpi.h: proceeding with the compiler's result" >&2;}
+ ac_header_preproc=yes
+ ;;
+ no:yes:* )
+ { echo "$as_me:$LINENO: WARNING: mpi.h: present but cannot be compiled" >&5
+echo "$as_me: WARNING: mpi.h: present but cannot be compiled" >&2;}
+ { echo "$as_me:$LINENO: WARNING: mpi.h: check for missing prerequisite headers?" >&5
+echo "$as_me: WARNING: mpi.h: check for missing prerequisite headers?" >&2;}
+ { echo "$as_me:$LINENO: WARNING: mpi.h: see the Autoconf documentation" >&5
+echo "$as_me: WARNING: mpi.h: see the Autoconf documentation" >&2;}
+ { echo "$as_me:$LINENO: WARNING: mpi.h: section \"Present But Cannot Be Compiled\"" >&5
+echo "$as_me: WARNING: mpi.h: section \"Present But Cannot Be Compiled\"" >&2;}
+ { echo "$as_me:$LINENO: WARNING: mpi.h: proceeding with the preprocessor's result" >&5
+echo "$as_me: WARNING: mpi.h: proceeding with the preprocessor's result" >&2;}
+ { echo "$as_me:$LINENO: WARNING: mpi.h: in the future, the compiler will take precedence" >&5
+echo "$as_me: WARNING: mpi.h: in the future, the compiler will take precedence" >&2;}
+
+ ;;
+esac
+{ echo "$as_me:$LINENO: checking for mpi.h" >&5
+echo $ECHO_N "checking for mpi.h... $ECHO_C" >&6; }
+if test "${ac_cv_header_mpi_h+set}" = set; then
+ echo $ECHO_N "(cached) $ECHO_C" >&6
+else
+ ac_cv_header_mpi_h=$ac_header_preproc
+fi
+{ echo "$as_me:$LINENO: result: $ac_cv_header_mpi_h" >&5
+echo "${ECHO_T}$ac_cv_header_mpi_h" >&6; }
+
+fi
+if test $ac_cv_header_mpi_h = yes; then
+ :
+else
+ { { echo "$as_me:$LINENO: error: \"missing mpi.h\"" >&5
+echo "$as_me: error: \"missing mpi.h\"" >&2;}
+ { (exit 1); exit 1; }; }
+fi
+
+
+
+
+{ echo "$as_me:$LINENO: checking for gpiv_piv_mpi_bcast_pivpar in -lgpiv_mpi" >&5
+echo $ECHO_N "checking for gpiv_piv_mpi_bcast_pivpar in -lgpiv_mpi... $ECHO_C" >&6; }
+if test "${ac_cv_lib_gpiv_mpi_gpiv_piv_mpi_bcast_pivpar+set}" = set; then
+ echo $ECHO_N "(cached) $ECHO_C" >&6
+else
+ ac_check_lib_save_LIBS=$LIBS
+LIBS="-lgpiv_mpi $LIBS"
+cat >conftest.$ac_ext <<_ACEOF
+/* confdefs.h. */
+_ACEOF
+cat confdefs.h >>conftest.$ac_ext
+cat >>conftest.$ac_ext <<_ACEOF
+/* end confdefs.h. */
+
+/* Override any GCC internal prototype to avoid an error.
+ Use char because int might match the return type of a GCC
+ builtin and then its argument prototype would still apply. */
+#ifdef __cplusplus
+extern "C"
+#endif
+char gpiv_piv_mpi_bcast_pivpar ();
+int
+main ()
+{
+return gpiv_piv_mpi_bcast_pivpar ();
+ ;
+ return 0;
+}
+_ACEOF
+rm -f conftest.$ac_objext conftest$ac_exeext
+if { (ac_try="$ac_link"
+case "(($ac_try" in
+ *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
+ *) ac_try_echo=$ac_try;;
+esac
+eval "echo \"\$as_me:$LINENO: $ac_try_echo\"") >&5
+ (eval "$ac_link") 2>conftest.er1
+ ac_status=$?
+ grep -v '^ *+' conftest.er1 >conftest.err
+ rm -f conftest.er1
+ cat conftest.err >&5
+ echo "$as_me:$LINENO: \$? = $ac_status" >&5
+ (exit $ac_status); } && {
+ test -z "$ac_c_werror_flag" ||
+ test ! -s conftest.err
+ } && test -s conftest$ac_exeext &&
+ $as_test_x conftest$ac_exeext; then
+ ac_cv_lib_gpiv_mpi_gpiv_piv_mpi_bcast_pivpar=yes
+else
+ echo "$as_me: failed program was:" >&5
+sed 's/^/| /' conftest.$ac_ext >&5
+
+ ac_cv_lib_gpiv_mpi_gpiv_piv_mpi_bcast_pivpar=no
+fi
+
+rm -f core conftest.err conftest.$ac_objext conftest_ipa8_conftest.oo \
+ conftest$ac_exeext conftest.$ac_ext
+LIBS=$ac_check_lib_save_LIBS
+fi
+{ echo "$as_me:$LINENO: result: $ac_cv_lib_gpiv_mpi_gpiv_piv_mpi_bcast_pivpar" >&5
+echo "${ECHO_T}$ac_cv_lib_gpiv_mpi_gpiv_piv_mpi_bcast_pivpar" >&6; }
+if test $ac_cv_lib_gpiv_mpi_gpiv_piv_mpi_bcast_pivpar = yes; then
+ cat >>confdefs.h <<_ACEOF
+#define HAVE_LIBGPIV_MPI 1
+_ACEOF
+
+ LIBS="-lgpiv_mpi $LIBS"
+
+else
+ { { echo "$as_me:$LINENO: error: \"gpiv_piv_mpi_bcast_pivpar is not working in libgpiv_mpi. \
+Enable MPI in libgpiv or disable it here by leaving out --enable-mpi during ./configure\"" >&5
+echo "$as_me: error: \"gpiv_piv_mpi_bcast_pivpar is not working in libgpiv_mpi. \
+Enable MPI in libgpiv or disable it here by leaving out --enable-mpi during ./configure\"" >&2;}
+ { (exit 1); exit 1; }; }
+fi
+
+
+ # Extract the first word of "mpipython", so it can be a program name with args.
+set dummy mpipython; ac_word=$2
+{ echo "$as_me:$LINENO: checking for $ac_word" >&5
+echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6; }
+if test "${ac_cv_prog_MPIPYTHON+set}" = set; then
+ echo $ECHO_N "(cached) $ECHO_C" >&6
+else
+ if test -n "$MPIPYTHON"; then
+ ac_cv_prog_MPIPYTHON="$MPIPYTHON" # Let the user override the test.
+else
+as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
+for as_dir in $PATH
+do
+ IFS=$as_save_IFS
+ test -z "$as_dir" && as_dir=.
+ for ac_exec_ext in '' $ac_executable_extensions; do
+ if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
+ ac_cv_prog_MPIPYTHON="true"
+ echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
+ break 2
+ fi
+done
+done
+IFS=$as_save_IFS
+
+ test -z "$ac_cv_prog_MPIPYTHON" && ac_cv_prog_MPIPYTHON="false"
+fi
+fi
+MPIPYTHON=$ac_cv_prog_MPIPYTHON
+if test -n "$MPIPYTHON"; then
+ { echo "$as_me:$LINENO: result: $MPIPYTHON" >&5
+echo "${ECHO_T}$MPIPYTHON" >&6; }
+else
+ { echo "$as_me:$LINENO: result: no" >&5
+echo "${ECHO_T}no" >&6; }
+fi
+
+
+
+else
+
{ echo "$as_me:$LINENO: checking for gpiv_warning in -lgpiv" >&5
echo $ECHO_N "checking for gpiv_warning in -lgpiv... $ECHO_C" >&6; }
if test "${ac_cv_lib_gpiv_gpiv_warning+set}" = set; then
@@ -7027,6 +7705,7 @@
{ (exit 1); exit 1; }; }
fi
+fi
@@ -7854,682 +8533,6 @@
-# Check whether --enable-mpi was given.
-if test "${enable_mpi+set}" = set; then
- enableval=$enable_mpi; ENABLE_MPI="-DENABLE_MPI"
-
-fi
-
-
-
-if test "${ENABLE_MPI}" == '-DENABLE_MPI'; then
-
-
-
-
-
- for ac_prog in mpicc hcc mpcc mpcc_r mpxlc cmpicc
-do
- # Extract the first word of "$ac_prog", so it can be a program name with args.
-set dummy $ac_prog; ac_word=$2
-{ echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6; }
-if test "${ac_cv_prog_MPICC+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- if test -n "$MPICC"; then
- ac_cv_prog_MPICC="$MPICC" # Let the user override the test.
-else
-as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
- ac_cv_prog_MPICC="$ac_prog"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
- break 2
- fi
-done
-done
-IFS=$as_save_IFS
-
-fi
-fi
-MPICC=$ac_cv_prog_MPICC
-if test -n "$MPICC"; then
- { echo "$as_me:$LINENO: result: $MPICC" >&5
-echo "${ECHO_T}$MPICC" >&6; }
-else
- { echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6; }
-fi
-
-
- test -n "$MPICC" && break
-done
-test -n "$MPICC" || MPICC="$CC"
-
- acx_mpi_save_CC="$CC"
- CC="$MPICC"
-
-
-
-if test x = x"$MPILIBS"; then
- { echo "$as_me:$LINENO: checking for MPI_Init" >&5
-echo $ECHO_N "checking for MPI_Init... $ECHO_C" >&6; }
-if test "${ac_cv_func_MPI_Init+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-/* Define MPI_Init to an innocuous variant, in case <limits.h> declares MPI_Init.
- For example, HP-UX 11i <limits.h> declares gettimeofday. */
-#define MPI_Init innocuous_MPI_Init
-
-/* System header to define __stub macros and hopefully few prototypes,
- which can conflict with char MPI_Init (); below.
- Prefer <limits.h> to <assert.h> if __STDC__ is defined, since
- <limits.h> exists even on freestanding compilers. */
-
-#ifdef __STDC__
-# include <limits.h>
-#else
-# include <assert.h>
-#endif
-
-#undef MPI_Init
-
-/* Override any GCC internal prototype to avoid an error.
- Use char because int might match the return type of a GCC
- builtin and then its argument prototype would still apply. */
-#ifdef __cplusplus
-extern "C"
-#endif
-char MPI_Init ();
-/* The GNU C library defines this for functions which it implements
- to always fail with ENOSYS. Some functions are actually named
- something starting with __ and the normal name is an alias. */
-#if defined __stub_MPI_Init || defined __stub___MPI_Init
-choke me
-#endif
-
-int
-main ()
-{
-return MPI_Init ();
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext conftest$ac_exeext
-if { (ac_try="$ac_link"
-case "(($ac_try" in
- *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
- *) ac_try_echo=$ac_try;;
-esac
-eval "echo \"\$as_me:$LINENO: $ac_try_echo\"") >&5
- (eval "$ac_link") 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } && {
- test -z "$ac_c_werror_flag" ||
- test ! -s conftest.err
- } && test -s conftest$ac_exeext &&
- $as_test_x conftest$ac_exeext; then
- ac_cv_func_MPI_Init=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
- ac_cv_func_MPI_Init=no
-fi
-
-rm -f core conftest.err conftest.$ac_objext conftest_ipa8_conftest.oo \
- conftest$ac_exeext conftest.$ac_ext
-fi
-{ echo "$as_me:$LINENO: result: $ac_cv_func_MPI_Init" >&5
-echo "${ECHO_T}$ac_cv_func_MPI_Init" >&6; }
-if test $ac_cv_func_MPI_Init = yes; then
- MPILIBS=" "
-fi
-
-fi
-if test x = x"$MPILIBS"; then
- { echo "$as_me:$LINENO: checking for MPI_Init in -lmpi" >&5
-echo $ECHO_N "checking for MPI_Init in -lmpi... $ECHO_C" >&6; }
-if test "${ac_cv_lib_mpi_MPI_Init+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- ac_check_lib_save_LIBS=$LIBS
-LIBS="-lmpi $LIBS"
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-
-/* Override any GCC internal prototype to avoid an error.
- Use char because int might match the return type of a GCC
- builtin and then its argument prototype would still apply. */
-#ifdef __cplusplus
-extern "C"
-#endif
-char MPI_Init ();
-int
-main ()
-{
-return MPI_Init ();
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext conftest$ac_exeext
-if { (ac_try="$ac_link"
-case "(($ac_try" in
- *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
- *) ac_try_echo=$ac_try;;
-esac
-eval "echo \"\$as_me:$LINENO: $ac_try_echo\"") >&5
- (eval "$ac_link") 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } && {
- test -z "$ac_c_werror_flag" ||
- test ! -s conftest.err
- } && test -s conftest$ac_exeext &&
- $as_test_x conftest$ac_exeext; then
- ac_cv_lib_mpi_MPI_Init=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
- ac_cv_lib_mpi_MPI_Init=no
-fi
-
-rm -f core conftest.err conftest.$ac_objext conftest_ipa8_conftest.oo \
- conftest$ac_exeext conftest.$ac_ext
-LIBS=$ac_check_lib_save_LIBS
-fi
-{ echo "$as_me:$LINENO: result: $ac_cv_lib_mpi_MPI_Init" >&5
-echo "${ECHO_T}$ac_cv_lib_mpi_MPI_Init" >&6; }
-if test $ac_cv_lib_mpi_MPI_Init = yes; then
- MPILIBS="-lmpi"
-fi
-
-fi
-if test x = x"$MPILIBS"; then
- { echo "$as_me:$LINENO: checking for MPI_Init in -lmpich" >&5
-echo $ECHO_N "checking for MPI_Init in -lmpich... $ECHO_C" >&6; }
-if test "${ac_cv_lib_mpich_MPI_Init+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- ac_check_lib_save_LIBS=$LIBS
-LIBS="-lmpich $LIBS"
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-
-/* Override any GCC internal prototype to avoid an error.
- Use char because int might match the return type of a GCC
- builtin and then its argument prototype would still apply. */
-#ifdef __cplusplus
-extern "C"
-#endif
-char MPI_Init ();
-int
-main ()
-{
-return MPI_Init ();
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext conftest$ac_exeext
-if { (ac_try="$ac_link"
-case "(($ac_try" in
- *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
- *) ac_try_echo=$ac_try;;
-esac
-eval "echo \"\$as_me:$LINENO: $ac_try_echo\"") >&5
- (eval "$ac_link") 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } && {
- test -z "$ac_c_werror_flag" ||
- test ! -s conftest.err
- } && test -s conftest$ac_exeext &&
- $as_test_x conftest$ac_exeext; then
- ac_cv_lib_mpich_MPI_Init=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
- ac_cv_lib_mpich_MPI_Init=no
-fi
-
-rm -f core conftest.err conftest.$ac_objext conftest_ipa8_conftest.oo \
- conftest$ac_exeext conftest.$ac_ext
-LIBS=$ac_check_lib_save_LIBS
-fi
-{ echo "$as_me:$LINENO: result: $ac_cv_lib_mpich_MPI_Init" >&5
-echo "${ECHO_T}$ac_cv_lib_mpich_MPI_Init" >&6; }
-if test $ac_cv_lib_mpich_MPI_Init = yes; then
- MPILIBS="-lmpich"
-fi
-
-fi
-
-if test x != x"$MPILIBS"; then
- { echo "$as_me:$LINENO: checking for mpi.h" >&5
-echo $ECHO_N "checking for mpi.h... $ECHO_C" >&6; }
- cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#include <mpi.h>
-int
-main ()
-{
-
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext
-if { (ac_try="$ac_compile"
-case "(($ac_try" in
- *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
- *) ac_try_echo=$ac_try;;
-esac
-eval "echo \"\$as_me:$LINENO: $ac_try_echo\"") >&5
- (eval "$ac_compile") 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } && {
- test -z "$ac_c_werror_flag" ||
- test ! -s conftest.err
- } && test -s conftest.$ac_objext; then
- { echo "$as_me:$LINENO: result: yes" >&5
-echo "${ECHO_T}yes" >&6; }
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
- MPILIBS=""
- { echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6; }
-fi
-
-rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
-fi
-
-CC="$acx_mpi_save_CC"
-
-
-
-# Finally, execute ACTION-IF-FOUND/ACTION-IF-NOT-FOUND:
-if test x = x"$MPILIBS"; then
- { { echo "$as_me:$LINENO: error: \"libmpi IS NOT installed\"" >&5
-echo "$as_me: error: \"libmpi IS NOT installed\"" >&2;}
- { (exit 1); exit 1; }; }
- :
-else
- { echo "$as_me:$LINENO: WARNING: \"libmpi HAS BEEN installed\"" >&5
-echo "$as_me: WARNING: \"libmpi HAS BEEN installed\"" >&2;}
- :
-fi
-
-
- CC="$MPICC"
- LIBS="$MPILIBS $LIBS"
-
-
-{ echo "$as_me:$LINENO: checking for main in -lmpi" >&5
-echo $ECHO_N "checking for main in -lmpi... $ECHO_C" >&6; }
-if test "${ac_cv_lib_mpi_main+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- ac_check_lib_save_LIBS=$LIBS
-LIBS="-lmpi $LIBS"
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-
-
-int
-main ()
-{
-return main ();
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext conftest$ac_exeext
-if { (ac_try="$ac_link"
-case "(($ac_try" in
- *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
- *) ac_try_echo=$ac_try;;
-esac
-eval "echo \"\$as_me:$LINENO: $ac_try_echo\"") >&5
- (eval "$ac_link") 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } && {
- test -z "$ac_c_werror_flag" ||
- test ! -s conftest.err
- } && test -s conftest$ac_exeext &&
- $as_test_x conftest$ac_exeext; then
- ac_cv_lib_mpi_main=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
- ac_cv_lib_mpi_main=no
-fi
-
-rm -f core conftest.err conftest.$ac_objext conftest_ipa8_conftest.oo \
- conftest$ac_exeext conftest.$ac_ext
-LIBS=$ac_check_lib_save_LIBS
-fi
-{ echo "$as_me:$LINENO: result: $ac_cv_lib_mpi_main" >&5
-echo "${ECHO_T}$ac_cv_lib_mpi_main" >&6; }
-if test $ac_cv_lib_mpi_main = yes; then
- cat >>confdefs.h <<_ACEOF
-#define HAVE_LIBMPI 1
-_ACEOF
-
- LIBS="-lmpi $LIBS"
-
-else
- { { echo "$as_me:$LINENO: error: \"libmpi not installed\"" >&5
-echo "$as_me: error: \"libmpi not installed\"" >&2;}
- { (exit 1); exit 1; }; }
-fi
-
- if test "${ac_cv_header_mpi_h+set}" = set; then
- { echo "$as_me:$LINENO: checking for mpi.h" >&5
-echo $ECHO_N "checking for mpi.h... $ECHO_C" >&6; }
-if test "${ac_cv_header_mpi_h+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-fi
-{ echo "$as_me:$LINENO: result: $ac_cv_header_mpi_h" >&5
-echo "${ECHO_T}$ac_cv_header_mpi_h" >&6; }
-else
- # Is the header compilable?
-{ echo "$as_me:$LINENO: checking mpi.h usability" >&5
-echo $ECHO_N "checking mpi.h usability... $ECHO_C" >&6; }
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-$ac_includes_default
-#include <mpi.h>
-_ACEOF
-rm -f conftest.$ac_objext
-if { (ac_try="$ac_compile"
-case "(($ac_try" in
- *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
- *) ac_try_echo=$ac_try;;
-esac
-eval "echo \"\$as_me:$LINENO: $ac_try_echo\"") >&5
- (eval "$ac_compile") 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } && {
- test -z "$ac_c_werror_flag" ||
- test ! -s conftest.err
- } && test -s conftest.$ac_objext; then
- ac_header_compiler=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
- ac_header_compiler=no
-fi
-
-rm -f core conftest.err conftest.$ac_objext conftest.$ac_ext
-{ echo "$as_me:$LINENO: result: $ac_header_compiler" >&5
-echo "${ECHO_T}$ac_header_compiler" >&6; }
-
-# Is the header present?
-{ echo "$as_me:$LINENO: checking mpi.h presence" >&5
-echo $ECHO_N "checking mpi.h presence... $ECHO_C" >&6; }
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-#include <mpi.h>
-_ACEOF
-if { (ac_try="$ac_cpp conftest.$ac_ext"
-case "(($ac_try" in
- *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
- *) ac_try_echo=$ac_try;;
-esac
-eval "echo \"\$as_me:$LINENO: $ac_try_echo\"") >&5
- (eval "$ac_cpp conftest.$ac_ext") 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } >/dev/null && {
- test -z "$ac_c_preproc_warn_flag$ac_c_werror_flag" ||
- test ! -s conftest.err
- }; then
- ac_header_preproc=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
- ac_header_preproc=no
-fi
-
-rm -f conftest.err conftest.$ac_ext
-{ echo "$as_me:$LINENO: result: $ac_header_preproc" >&5
-echo "${ECHO_T}$ac_header_preproc" >&6; }
-
-# So? What about this header?
-case $ac_header_compiler:$ac_header_preproc:$ac_c_preproc_warn_flag in
- yes:no: )
- { echo "$as_me:$LINENO: WARNING: mpi.h: accepted by the compiler, rejected by the preprocessor!" >&5
-echo "$as_me: WARNING: mpi.h: accepted by the compiler, rejected by the preprocessor!" >&2;}
- { echo "$as_me:$LINENO: WARNING: mpi.h: proceeding with the compiler's result" >&5
-echo "$as_me: WARNING: mpi.h: proceeding with the compiler's result" >&2;}
- ac_header_preproc=yes
- ;;
- no:yes:* )
- { echo "$as_me:$LINENO: WARNING: mpi.h: present but cannot be compiled" >&5
-echo "$as_me: WARNING: mpi.h: present but cannot be compiled" >&2;}
- { echo "$as_me:$LINENO: WARNING: mpi.h: check for missing prerequisite headers?" >&5
-echo "$as_me: WARNING: mpi.h: check for missing prerequisite headers?" >&2;}
- { echo "$as_me:$LINENO: WARNING: mpi.h: see the Autoconf documentation" >&5
-echo "$as_me: WARNING: mpi.h: see the Autoconf documentation" >&2;}
- { echo "$as_me:$LINENO: WARNING: mpi.h: section \"Present But Cannot Be Compiled\"" >&5
-echo "$as_me: WARNING: mpi.h: section \"Present But Cannot Be Compiled\"" >&2;}
- { echo "$as_me:$LINENO: WARNING: mpi.h: proceeding with the preprocessor's result" >&5
-echo "$as_me: WARNING: mpi.h: proceeding with the preprocessor's result" >&2;}
- { echo "$as_me:$LINENO: WARNING: mpi.h: in the future, the compiler will take precedence" >&5
-echo "$as_me: WARNING: mpi.h: in the future, the compiler will take precedence" >&2;}
-
- ;;
-esac
-{ echo "$as_me:$LINENO: checking for mpi.h" >&5
-echo $ECHO_N "checking for mpi.h... $ECHO_C" >&6; }
-if test "${ac_cv_header_mpi_h+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- ac_cv_header_mpi_h=$ac_header_preproc
-fi
-{ echo "$as_me:$LINENO: result: $ac_cv_header_mpi_h" >&5
-echo "${ECHO_T}$ac_cv_header_mpi_h" >&6; }
-
-fi
-if test $ac_cv_header_mpi_h = yes; then
- :
-else
- { { echo "$as_me:$LINENO: error: \"missing mpi.h\"" >&5
-echo "$as_me: error: \"missing mpi.h\"" >&2;}
- { (exit 1); exit 1; }; }
-fi
-
-
-
-
-{ echo "$as_me:$LINENO: checking for gpiv_piv_mpi_bcast_pivpar in -lgpiv" >&5
-echo $ECHO_N "checking for gpiv_piv_mpi_bcast_pivpar in -lgpiv... $ECHO_C" >&6; }
-if test "${ac_cv_lib_gpiv_gpiv_piv_mpi_bcast_pivpar+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- ac_check_lib_save_LIBS=$LIBS
-LIBS="-lgpiv $LIBS"
-cat >conftest.$ac_ext <<_ACEOF
-/* confdefs.h. */
-_ACEOF
-cat confdefs.h >>conftest.$ac_ext
-cat >>conftest.$ac_ext <<_ACEOF
-/* end confdefs.h. */
-
-/* Override any GCC internal prototype to avoid an error.
- Use char because int might match the return type of a GCC
- builtin and then its argument prototype would still apply. */
-#ifdef __cplusplus
-extern "C"
-#endif
-char gpiv_piv_mpi_bcast_pivpar ();
-int
-main ()
-{
-return gpiv_piv_mpi_bcast_pivpar ();
- ;
- return 0;
-}
-_ACEOF
-rm -f conftest.$ac_objext conftest$ac_exeext
-if { (ac_try="$ac_link"
-case "(($ac_try" in
- *\"* | *\`* | *\\*) ac_try_echo=\$ac_try;;
- *) ac_try_echo=$ac_try;;
-esac
-eval "echo \"\$as_me:$LINENO: $ac_try_echo\"") >&5
- (eval "$ac_link") 2>conftest.er1
- ac_status=$?
- grep -v '^ *+' conftest.er1 >conftest.err
- rm -f conftest.er1
- cat conftest.err >&5
- echo "$as_me:$LINENO: \$? = $ac_status" >&5
- (exit $ac_status); } && {
- test -z "$ac_c_werror_flag" ||
- test ! -s conftest.err
- } && test -s conftest$ac_exeext &&
- $as_test_x conftest$ac_exeext; then
- ac_cv_lib_gpiv_gpiv_piv_mpi_bcast_pivpar=yes
-else
- echo "$as_me: failed program was:" >&5
-sed 's/^/| /' conftest.$ac_ext >&5
-
- ac_cv_lib_gpiv_gpiv_piv_mpi_bcast_pivpar=no
-fi
-
-rm -f core conftest.err conftest.$ac_objext conftest_ipa8_conftest.oo \
- conftest$ac_exeext conftest.$ac_ext
-LIBS=$ac_check_lib_save_LIBS
-fi
-{ echo "$as_me:$LINENO: result: $ac_cv_lib_gpiv_gpiv_piv_mpi_bcast_pivpar" >&5
-echo "${ECHO_T}$ac_cv_lib_gpiv_gpiv_piv_mpi_bcast_pivpar" >&6; }
-if test $ac_cv_lib_gpiv_gpiv_piv_mpi_bcast_pivpar = yes; then
- cat >>confdefs.h <<_ACEOF
-#define HAVE_LIBGPIV 1
-_ACEOF
-
- LIBS="-lgpiv $LIBS"
-
-else
- { { echo "$as_me:$LINENO: error: \"gpiv_piv_mpi_bcast_pivpar is not working in libgpiv. \
-Enable MPI in libgpiv or disable it here by leaving out --enable-mpi during ./configure\"" >&5
-echo "$as_me: error: \"gpiv_piv_mpi_bcast_pivpar is not working in libgpiv. \
-Enable MPI in libgpiv or disable it here by leaving out --enable-mpi during ./configure\"" >&2;}
- { (exit 1); exit 1; }; }
-fi
-
-
- # Extract the first word of "mpipython", so it can be a program name with args.
-set dummy mpipython; ac_word=$2
-{ echo "$as_me:$LINENO: checking for $ac_word" >&5
-echo $ECHO_N "checking for $ac_word... $ECHO_C" >&6; }
-if test "${ac_cv_prog_MPIPYTHON+set}" = set; then
- echo $ECHO_N "(cached) $ECHO_C" >&6
-else
- if test -n "$MPIPYTHON"; then
- ac_cv_prog_MPIPYTHON="$MPIPYTHON" # Let the user override the test.
-else
-as_save_IFS=$IFS; IFS=$PATH_SEPARATOR
-for as_dir in $PATH
-do
- IFS=$as_save_IFS
- test -z "$as_dir" && as_dir=.
- for ac_exec_ext in '' $ac_executable_extensions; do
- if { test -f "$as_dir/$ac_word$ac_exec_ext" && $as_test_x "$as_dir/$ac_word$ac_exec_ext"; }; then
- ac_cv_prog_MPIPYTHON="true"
- echo "$as_me:$LINENO: found $as_dir/$ac_word$ac_exec_ext" >&5
- break 2
- fi
-done
-done
-IFS=$as_save_IFS
-
- test -z "$ac_cv_prog_MPIPYTHON" && ac_cv_prog_MPIPYTHON="false"
-fi
-fi
-MPIPYTHON=$ac_cv_prog_MPIPYTHON
-if test -n "$MPIPYTHON"; then
- { echo "$as_me:$LINENO: result: $MPIPYTHON" >&5
-echo "${ECHO_T}$MPIPYTHON" >&6; }
-else
- { echo "$as_me:$LINENO: result: no" >&5
-echo "${ECHO_T}no" >&6; }
-fi
-
-
-fi
-
-
if $MPIPYTHON; then
@@ -9996,6 +9999,10 @@
cat >conf$$subs.sed <<_ACEOF
HAVE_PLOTMTV_TRUE!$HAVE_PLOTMTV_TRUE$ac_delim
HAVE_PLOTMTV_FALSE!$HAVE_PLOTMTV_FALSE$ac_delim
+ENABLE_MPI!$ENABLE_MPI$ac_delim
+MPICC!$MPICC$ac_delim
+MPILIBS!$MPILIBS$ac_delim
+MPIPYTHON!$MPIPYTHON$ac_delim
ENABLE_CAM!$ENABLE_CAM$ac_delim
ENABLE_TRIG!$ENABLE_TRIG$ac_delim
CONTROL!$CONTROL$ac_delim
@@ -10003,10 +10010,6 @@
HAVE_CONTROL_FALSE!$HAVE_CONTROL_FALSE$ac_delim
RTA_TOPDIR!$RTA_TOPDIR$ac_delim
K_TOPDIR!$K_TOPDIR$ac_delim
-ENABLE_MPI!$ENABLE_MPI$ac_delim
-MPICC!$MPICC$ac_delim
-MPILIBS!$MPILIBS$ac_delim
-MPIPYTHON!$MPIPYTHON$ac_delim
HAVE_MPIPYTHON_TRUE!$HAVE_MPIPYTHON_TRUE$ac_delim
HAVE_MPIPYTHON_FALSE!$HAVE_MPIPYTHON_FALSE$ac_delim
BUILD_MPI_TRUE!$BUILD_MPI_TRUE$ac_delim
diff -urNad gpivtools-0.6.0~/configure.in gpivtools-0.6.0/configure.in
--- gpivtools-0.6.0~/configure.in 2009-03-09 09:33:31.000000000 +0100
+++ gpivtools-0.6.0/configure.in 2009-03-09 09:39:12.000000000 +0100
@@ -62,12 +62,40 @@
dnl AC_CHECK_HEADER(gpiv.h, ,
dnl AC_MSG_ERROR("missing gpiv.h"))
-AC_CHECK_LIB(gpiv, gpiv_warning, ,
- AC_MSG_ERROR("libgpiv has not been installed"))
-dnl AC_CHECK_LIB(gpiv, gpiv_scan_resourcefiles, ,
-dnl AC_MSG_ERROR("libgpiv has not been installed"))
-dnl AC_CHECK_LIB(gpiv, gpiv_alloc_img, ,
-dnl AC_MSG_ERROR("libgpiv has not been installed"))
+
+
+dnl
+dnl Enabling Message Passing Interface (MPI) for parallel computing
+dnl
+AC_ARG_ENABLE(mpi,
+ [ --enable-mpi enable Message Protocol Interface (MPI)],
+ [ENABLE_MPI="-DENABLE_MPI"]
+ )
+AC_SUBST(ENABLE_MPI)
+
+
+if test "${ENABLE_MPI}" == '-DENABLE_MPI'; then
+ ACX_MPI(AC_MSG_WARN("libmpi HAS BEEN installed"),
+ AC_MSG_ERROR("libmpi IS NOT installed"))
+
+ CC="$MPICC"
+ LIBS="$MPILIBS $LIBS"
+
+ AC_CHECK_LIB(mpi, main, ,
+ AC_MSG_ERROR("libmpi not installed"))
+ AC_CHECK_HEADER(mpi.h, ,
+ AC_MSG_ERROR("missing mpi.h"))
+
+ AC_CHECK_LIB(gpiv_mpi, gpiv_piv_mpi_bcast_pivpar, ,
+ AC_MSG_ERROR("gpiv_piv_mpi_bcast_pivpar is not working in libgpiv_mpi. \
+Enable MPI in libgpiv or disable it here by leaving out --enable-mpi during ./configure"))
+
+ AC_CHECK_PROG(MPIPYTHON, mpipython, true, false)
+
+else
+ AC_CHECK_LIB(gpiv, gpiv_warning, ,
+ AC_MSG_ERROR("libgpiv has not been installed"))
+fi
AC_CHECK_HEADERS([ stdlib.h string.h unistd.h \
@@ -148,37 +176,6 @@
AC_SUBST(K_TOPDIR)
-dnl
-dnl Enabling Message Passing Interface (MPI) for parallel computing
-dnl
-AC_ARG_ENABLE(mpi,
- [ --enable-mpi enable Message Protocol Interface (MPI)],
- [ENABLE_MPI="-DENABLE_MPI"]
- )
-AC_SUBST(ENABLE_MPI)
-dnl USE_LAM 1
-dnl AC_SUBST(USE_LAM)
-
-if test "${ENABLE_MPI}" == '-DENABLE_MPI'; then
- ACX_MPI(AC_MSG_WARN("libmpi HAS BEEN installed"),
- AC_MSG_ERROR("libmpi IS NOT installed"))
-
- CC="$MPICC"
- LIBS="$MPILIBS $LIBS"
-
- AC_CHECK_LIB(mpi, main, ,
- AC_MSG_ERROR("libmpi not installed"))
- AC_CHECK_HEADER(mpi.h, ,
- AC_MSG_ERROR("missing mpi.h"))
-
- AC_CHECK_LIB(gpiv, gpiv_piv_mpi_bcast_pivpar, ,
- AC_MSG_ERROR("gpiv_piv_mpi_bcast_pivpar is not working in libgpiv. \
-Enable MPI in libgpiv or disable it here by leaving out --enable-mpi during ./configure"))
-
- AC_CHECK_PROG(MPIPYTHON, mpipython, true, false)
-fi
-
-
AM_CONDITIONAL(HAVE_MPIPYTHON, $MPIPYTHON)
AM_CONDITIONAL(BUILD_MPI, test "${ENABLE_MPI}" == '-DENABLE_MPI')
diff -urNad gpivtools-0.6.0~/src/evaluate/rr.c gpivtools-0.6.0/src/evaluate/rr.c
--- gpivtools-0.6.0~/src/evaluate/rr.c 2009-03-09 09:33:31.000000000 +0100
+++ gpivtools-0.6.0/src/evaluate/rr.c 2009-03-09 09:39:12.000000000 +0100
@@ -5,7 +5,8 @@
rr - rr calculates the mean particle displacement for (Digital) Particle
Image Velocimetry (DPIV) by means of FFT.
- Copyright (C) 2002, 2003, 2004 Gerber van der Graaf
+ Copyright (C) 2002, 2003, 2004, 2005, 2006, 2007, 2008
+ Gerber van der Graaf <gerber_graaf@users.sourceforge.net
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
@@ -100,10 +101,20 @@
"
#endif
+#ifdef ENABLE_MPI
#define HELP "\
rr interrogates an image (pair) in order to obtain displacements of \n\
particles for (Digital) Particle Image Velocimetry (PIV). \n\
+This program is MPI-enabled for parallel processing. Hence it has to \n\
+be invoked with mpirun. \n\
"
+#else /* ENABLE_MPI */
+#define HELP "\
+rr interrogates an image (pair) in order to obtain displacements of \n\
+particles for (Digital) Particle Image Velocimetry (PIV). \n\
+"
+#endif /* ENABLE_MPI */
+
#define RCSID "$Id: rr.c,v 3.26 2008-09-25 13:18:48 gerber Exp $"
/*
@@ -612,7 +623,7 @@
GpivValidPar *valid_par = g_new0 (GpivValidPar, 1);
#ifdef _OPENMP
- int np, nprocs, num_threads;
+ int np, num_threads;
#endif /* _OPENMP */
#ifdef ENABLE_MPI
diff -urNad gpivtools-0.6.0~/src/misc/Makefile.am gpivtools-0.6.0/src/misc/Makefile.am
--- gpivtools-0.6.0~/src/misc/Makefile.am 2009-03-09 09:33:32.000000000 +0100
+++ gpivtools-0.6.0/src/misc/Makefile.am 2009-03-09 09:39:12.000000000 +0100
@@ -5,9 +5,13 @@
K_TOPDIR = @K_TOPDIR@
AM_CFLAGS = -Wall @ENABLE_CAM@ @ENABLE_TRIG@
-bin_PROGRAMS = gpiv_piv2hdf gpiv_hdf2piv gpiv_piv2gnuplt \
- gpiv_piv2grid gpiv_t-corr \
- gpiv_suta gpiv_combing
+bin_PROGRAMS = gpiv_piv2hdf \
+ gpiv_hdf2piv \
+ gpiv_piv2gnuplt \
+ gpiv_piv2grid \
+ gpiv_t-corr \
+ gpiv_suta \
+ gpiv_combing
gpiv_piv2hdf_SOURCES = piv2hdf.c
gpiv_hdf2piv_SOURCES = hdf2piv.c
@@ -17,51 +21,51 @@
gpiv_suta_SOURCES = suta.c
gpiv_combing_SOURCES = combing.c
-bin_SCRIPTS = gpiv_series \
- gpiv_img2gpiv \
- gpiv_piv2vec \
- gpiv_process-chain \
- gpiv_sca2gri \
- gpiv_t-avg \
- gpiv_fi-keyline
+bin_SCRIPTS = gpiv_series \
+ gpiv_img2gpiv \
+ gpiv_piv2vec \
+ gpiv_process-chain \
+ gpiv_sca2gri \
+ gpiv_t-avg \
+ gpiv_fi-keyline
if BUILD_MPI
-gpiv_series: series_mpi.py
- cp series_mpi.py gpiv_series
+gpiv_series: $(top_srcdir)/src/misc/series_mpi.py
+ cp $(top_srcdir)/src/misc/series_mpi.py gpiv_series
chmod +x gpiv_series
else
-gpiv_series: series_ser.py
- cp series_ser.py gpiv_series
+gpiv_series: $(top_srcdir)/src/misc/series_ser.py
+ cp $(top_srcdir)/src/misc/series_ser.py gpiv_series
chmod +x gpiv_series
endif
-gpiv_img2gpiv: img2gpiv.pl
- cp img2gpiv.pl gpiv_img2gpiv
+gpiv_img2gpiv: $(top_srcdir)/src/misc/img2gpiv.pl
+ cp $(top_srcdir)/src/misc/img2gpiv.pl gpiv_img2gpiv
chmod +x gpiv_img2gpiv
-gpiv_piv2vec: piv2vec.pl
- cp piv2vec.pl gpiv_piv2vec
+gpiv_piv2vec: $(top_srcdir)/src/misc/piv2vec.pl
+ cp $(top_srcdir)/src/misc/piv2vec.pl gpiv_piv2vec
chmod +x gpiv_piv2vec
-gpiv_process-chain: process-chain.pl
- cp process-chain.pl gpiv_process-chain
+gpiv_process-chain: $(top_srcdir)/src/misc/process-chain.pl
+ cp $(top_srcdir)/src/misc/process-chain.pl gpiv_process-chain
chmod +x gpiv_process-chain
-gpiv_sca2gri: sca2gri.pl
- cp sca2gri.pl gpiv_sca2gri
+gpiv_sca2gri: $(top_srcdir)/src/misc/sca2gri.pl
+ cp $(top_srcdir)/src/misc/sca2gri.pl gpiv_sca2gri
chmod +x gpiv_sca2gri
-gpiv_t-avg: t-avg.pl
- cp t-avg.pl gpiv_t-avg
+gpiv_t-avg: $(top_srcdir)/src/misc/t-avg.pl
+ cp $(top_srcdir)/src/misc/t-avg.pl gpiv_t-avg
chmod +x gpiv_t-avg
-gpiv_fi-keyline: fi-keyline.pl
- cp fi-keyline.pl gpiv_fi-keyline
+gpiv_fi-keyline: $(top_srcdir)/src/misc/fi-keyline.pl
+ cp $(top_srcdir)/src/misc/fi-keyline.pl gpiv_fi-keyline
chmod +x gpiv_fi-keyline
clean:
-test -z "$(bin_PROGRAMS) $(bin_SCRIPTS)" || rm -f $(bin_PROGRAMS) $(bin_SCRIPTS)
- rm -f *.o
+ rm -f $(top_srcdir)/src/misc/*.o
EXTRA_DIST = Makefile.in \
series_ser.py series_mpi.py \
diff -urNad gpivtools-0.6.0~/src/misc/Makefile.in gpivtools-0.6.0/src/misc/Makefile.in
--- gpivtools-0.6.0~/src/misc/Makefile.in 2009-03-09 09:33:32.000000000 +0100
+++ gpivtools-0.6.0/src/misc/Makefile.in 2009-03-09 09:39:12.000000000 +0100
@@ -224,12 +224,12 @@
gpiv_suta_SOURCES = suta.c
gpiv_combing_SOURCES = combing.c
bin_SCRIPTS = gpiv_series \
- gpiv_img2gpiv \
- gpiv_piv2vec \
- gpiv_process-chain \
- gpiv_sca2gri \
- gpiv_t-avg \
- gpiv_fi-keyline
+ gpiv_img2gpiv \
+ gpiv_piv2vec \
+ gpiv_process-chain \
+ gpiv_sca2gri \
+ gpiv_t-avg \
+ gpiv_fi-keyline
EXTRA_DIST = Makefile.in \
series_ser.py series_mpi.py \
@@ -535,40 +535,40 @@
uninstall-binSCRIPTS uninstall-info-am
-@BUILD_MPI_TRUE@gpiv_series: series_mpi.py
-@BUILD_MPI_TRUE@ cp series_mpi.py gpiv_series
+@BUILD_MPI_TRUE@gpiv_series: $(top_srcdir)/src/misc/series_mpi.py
+@BUILD_MPI_TRUE@ cp $(top_srcdir)/src/misc/series_mpi.py gpiv_series
@BUILD_MPI_TRUE@ chmod +x gpiv_series
-@BUILD_MPI_FALSE@gpiv_series: series_ser.py
-@BUILD_MPI_FALSE@ cp series_ser.py gpiv_series
+@BUILD_MPI_FALSE@gpiv_series: $(top_srcdir)/src/misc/series_ser.py
+@BUILD_MPI_FALSE@ cp $(top_srcdir)/src/misc/series_ser.py gpiv_series
@BUILD_MPI_FALSE@ chmod +x gpiv_series
-gpiv_img2gpiv: img2gpiv.pl
- cp img2gpiv.pl gpiv_img2gpiv
+gpiv_img2gpiv: $(top_srcdir)/src/misc/img2gpiv.pl
+ cp $(top_srcdir)/src/misc/img2gpiv.pl gpiv_img2gpiv
chmod +x gpiv_img2gpiv
-gpiv_piv2vec: piv2vec.pl
- cp piv2vec.pl gpiv_piv2vec
+gpiv_piv2vec: $(top_srcdir)/src/misc/piv2vec.pl
+ cp $(top_srcdir)/src/misc/piv2vec.pl gpiv_piv2vec
chmod +x gpiv_piv2vec
-gpiv_process-chain: process-chain.pl
- cp process-chain.pl gpiv_process-chain
+gpiv_process-chain: $(top_srcdir)/src/misc/process-chain.pl
+ cp $(top_srcdir)/src/misc/process-chain.pl gpiv_process-chain
chmod +x gpiv_process-chain
-gpiv_sca2gri: sca2gri.pl
- cp sca2gri.pl gpiv_sca2gri
+gpiv_sca2gri: $(top_srcdir)/src/misc/sca2gri.pl
+ cp $(top_srcdir)/src/misc/sca2gri.pl gpiv_sca2gri
chmod +x gpiv_sca2gri
-gpiv_t-avg: t-avg.pl
- cp t-avg.pl gpiv_t-avg
+gpiv_t-avg: $(top_srcdir)/src/misc/t-avg.pl
+ cp $(top_srcdir)/src/misc/t-avg.pl gpiv_t-avg
chmod +x gpiv_t-avg
-gpiv_fi-keyline: fi-keyline.pl
- cp fi-keyline.pl gpiv_fi-keyline
+gpiv_fi-keyline: $(top_srcdir)/src/misc/fi-keyline.pl
+ cp $(top_srcdir)/src/misc/fi-keyline.pl gpiv_fi-keyline
chmod +x gpiv_fi-keyline
clean:
-test -z "$(bin_PROGRAMS) $(bin_SCRIPTS)" || rm -f $(bin_PROGRAMS) $(bin_SCRIPTS)
- rm -f *.o
+ rm -f $(top_srcdir)/src/misc/*.o
# Tell versions [3.59,3.63) of GNU make to not export all variables.
# Otherwise a system limit (for SysV at least) may be exceeded.
.NOEXPORT:
|