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/****************************************************************
*
* MODULE: v.net.centrality
*
* AUTHOR(S): Daniel Bundala
*
* PURPOSE: This module computes various centrality measures
*
* COPYRIGHT: (C) 2002-2005 by the GRASS Development Team
*
* This program is free software under the
* GNU General Public License (>=v2).
* Read the file COPYING that comes with GRASS
* for details.
*
****************************************************************/
#include <stdio.h>
#include <stdlib.h>
#include <grass/gis.h>
#include <grass/vector.h>
#include <grass/glocale.h>
#include <grass/dbmi.h>
#include <grass/neta.h>
/*Global variables */
struct Option *deg_opt, *close_opt, *betw_opt, *eigen_opt;
double *deg, *closeness, *betw, *eigen;
/* Attribute table */
dbString sql, tmp;
dbDriver *driver;
struct field_info *Fi;
void append_string(dbString *string, char *s)
{
db_append_string(string, ", ");
db_append_string(string, s);
db_append_string(string, " double precision");
}
void append_double(dbString *string, double d)
{
char buf[50];
sprintf(buf, ",%f", d);
db_append_string(string, buf);
}
void process_node(int node, int cat)
{
char buf[2000];
sprintf(buf, "INSERT INTO %s VALUES(%d", Fi->table, cat);
db_set_string(&sql, buf);
if (deg_opt->answer)
append_double(&sql, deg[node]);
if (close_opt->answer)
append_double(&sql, closeness[node]);
if (betw_opt->answer)
append_double(&sql, betw[node]);
if (eigen_opt->answer)
append_double(&sql, eigen[node]);
db_append_string(&sql, ")");
if (db_execute_immediate(driver, &sql) != DB_OK) {
db_close_database_shutdown_driver(driver);
G_fatal_error(_("Cannot insert new record: %s"), db_get_string(&sql));
}
}
int main(int argc, char *argv[])
{
struct Map_info In, Out;
static struct line_pnts *Points;
struct line_cats *Cats;
struct GModule *module; /* GRASS module for parsing arguments */
struct Option *map_in, *map_out;
struct Option *cat_opt, *where_opt, *afield_opt, *nfield_opt, *abcol,
*afcol, *ncol;
struct Option *iter_opt, *error_opt;
struct Flag *geo_f, *add_f;
int chcat, with_z;
int afield, nfield, mask_type;
struct varray *varray;
dglGraph_s *graph;
int i, geo, nnodes, nlines, j, max_cat;
char buf[2000], *covered;
/* initialize GIS environment */
G_gisinit(
argv[0]); /* reads grass env, stores program name to G_program_name() */
/* initialize module */
module = G_define_module();
G_add_keyword(_("vector"));
G_add_keyword(_("network"));
G_add_keyword(_("centrality measures"));
module->description =
_("Computes degree, centrality, betweeness, closeness and eigenvector "
"centrality measures in the network.");
/* Define the different options as defined in gis.h */
map_in = G_define_standard_option(G_OPT_V_INPUT);
afield_opt = G_define_standard_option(G_OPT_V_FIELD);
afield_opt->key = "arc_layer";
afield_opt->answer = "1";
afield_opt->label = _("Arc layer");
afield_opt->guisection = _("Cost");
nfield_opt = G_define_standard_option(G_OPT_V_FIELD);
nfield_opt->key = "node_layer";
nfield_opt->answer = "2";
nfield_opt->label = _("Node layer");
nfield_opt->guisection = _("Cost");
map_out = G_define_standard_option(G_OPT_V_OUTPUT);
cat_opt = G_define_standard_option(G_OPT_V_CATS);
cat_opt->guisection = _("Selection");
where_opt = G_define_standard_option(G_OPT_DB_WHERE);
where_opt->guisection = _("Selection");
afcol = G_define_standard_option(G_OPT_DB_COLUMN);
afcol->key = "arc_column";
afcol->required = NO;
afcol->description =
_("Arc forward/both direction(s) cost column (number)");
afcol->guisection = _("Cost");
abcol = G_define_standard_option(G_OPT_DB_COLUMN);
abcol->key = "arc_backward_column";
abcol->required = NO;
abcol->description = _("Arc backward direction cost column (number)");
abcol->guisection = _("Cost");
ncol = G_define_option();
ncol->key = "node_column";
ncol->type = TYPE_STRING;
ncol->required = NO;
ncol->description = _("Node cost column (number)");
ncol->guisection = _("Cost");
deg_opt = G_define_standard_option(G_OPT_DB_COLUMN);
deg_opt->key = "degree";
deg_opt->required = NO;
deg_opt->description = _("Name of degree centrality column");
deg_opt->guisection = _("Columns");
close_opt = G_define_standard_option(G_OPT_DB_COLUMN);
close_opt->key = "closeness";
close_opt->required = NO;
close_opt->description = _("Name of closeness centrality column");
close_opt->guisection = _("Columns");
betw_opt = G_define_standard_option(G_OPT_DB_COLUMN);
betw_opt->key = "betweenness";
betw_opt->required = NO;
betw_opt->description = _("Name of betweenness centrality column");
betw_opt->guisection = _("Columns");
eigen_opt = G_define_standard_option(G_OPT_DB_COLUMN);
eigen_opt->key = "eigenvector";
eigen_opt->required = NO;
eigen_opt->description = _("Name of eigenvector centrality column");
eigen_opt->guisection = _("Columns");
iter_opt = G_define_option();
iter_opt->key = "iterations";
iter_opt->answer = "1000";
iter_opt->type = TYPE_INTEGER;
iter_opt->required = NO;
iter_opt->description =
_("Maximum number of iterations to compute eigenvector centrality");
error_opt = G_define_option();
error_opt->key = "error";
error_opt->answer = "0.1";
error_opt->type = TYPE_DOUBLE;
error_opt->required = NO;
error_opt->description =
_("Cumulative error tolerance for eigenvector centrality");
geo_f = G_define_flag();
geo_f->key = 'g';
geo_f->description =
_("Use geodesic calculation for longitude-latitude projects");
add_f = G_define_flag();
add_f->key = 'a';
add_f->description = _("Add points on nodes");
/* options and flags parser */
if (G_parser(argc, argv))
exit(EXIT_FAILURE);
/* TODO: make an option for this */
mask_type = GV_LINE | GV_BOUNDARY;
Points = Vect_new_line_struct();
Cats = Vect_new_cats_struct();
Vect_check_input_output_name(map_in->answer, map_out->answer, G_FATAL_EXIT);
Vect_set_open_level(2);
if (1 > Vect_open_old(&In, map_in->answer, ""))
G_fatal_error(_("Unable to open vector map <%s>"), map_in->answer);
with_z = Vect_is_3d(&In);
if (0 > Vect_open_new(&Out, map_out->answer, with_z)) {
Vect_close(&In);
G_fatal_error(_("Unable to create vector map <%s>"), map_out->answer);
}
if (geo_f->answer) {
geo = 1;
if (G_projection() != PROJECTION_LL)
G_warning(_("The current projection is not longitude-latitude"));
}
else
geo = 0;
/* parse filter option and select appropriate lines */
afield = Vect_get_field_number(&In, afield_opt->answer);
nfield = Vect_get_field_number(&In, nfield_opt->answer);
if (where_opt->answer || cat_opt->answer) {
chcat =
(NetA_initialise_varray(&In, afield, GV_POINT, where_opt->answer,
cat_opt->answer, &varray) > 0);
}
else
chcat = 0;
/* Create table */
Fi = Vect_default_field_info(&Out, 1, NULL, GV_1TABLE);
Vect_map_add_dblink(&Out, 1, NULL, Fi->table, GV_KEY_COLUMN, Fi->database,
Fi->driver);
db_init_string(&sql);
driver = db_start_driver_open_database(Fi->driver, Fi->database);
if (driver == NULL)
G_fatal_error(_("Unable to open database <%s> by driver <%s>"),
Fi->database, Fi->driver);
db_set_error_handler_driver(driver);
db_init_string(&tmp);
if (deg_opt->answer)
append_string(&tmp, deg_opt->answer);
if (close_opt->answer)
append_string(&tmp, close_opt->answer);
if (betw_opt->answer)
append_string(&tmp, betw_opt->answer);
if (eigen_opt->answer)
append_string(&tmp, eigen_opt->answer);
sprintf(buf, "create table %s(cat integer%s)", Fi->table,
db_get_string(&tmp));
db_set_string(&sql, buf);
G_debug(2, "%s", db_get_string(&sql));
if (db_execute_immediate(driver, &sql) != DB_OK) {
G_fatal_error(_("Unable to create table: '%s'"), db_get_string(&sql));
}
if (db_create_index2(driver, Fi->table, GV_KEY_COLUMN) != DB_OK)
G_warning(_("Cannot create index"));
if (db_grant_on_table(driver, Fi->table, DB_PRIV_SELECT,
DB_GROUP | DB_PUBLIC) != DB_OK)
G_fatal_error(_("Cannot grant privileges on table <%s>"), Fi->table);
db_begin_transaction(driver);
Vect_copy_head_data(&In, &Out);
Vect_hist_copy(&In, &Out);
Vect_hist_command(&Out);
if (0 != Vect_net_build_graph(&In, mask_type, afield, nfield, afcol->answer,
abcol->answer, ncol->answer, geo, 0))
G_fatal_error(_("Unable to build graph for vector map <%s>"),
Vect_get_full_name(&In));
graph = Vect_net_get_graph(&In);
nnodes = dglGet_NodeCount(graph);
deg = closeness = betw = eigen = NULL;
covered = (char *)G_calloc(nnodes + 1, sizeof(char));
if (!covered)
G_fatal_error(_("Out of memory"));
if (deg_opt->answer) {
deg = (double *)G_calloc(nnodes + 1, sizeof(double));
if (!deg)
G_fatal_error(_("Out of memory"));
}
if (close_opt->answer) {
closeness = (double *)G_calloc(nnodes + 1, sizeof(double));
if (!closeness)
G_fatal_error(_("Out of memory"));
}
if (betw_opt->answer) {
betw = (double *)G_calloc(nnodes + 1, sizeof(double));
if (!betw)
G_fatal_error(_("Out of memory"));
}
if (eigen_opt->answer) {
eigen = (double *)G_calloc(nnodes + 1, sizeof(double));
if (!eigen)
G_fatal_error(_("Out of memory"));
}
if (deg_opt->answer) {
G_message(_("Computing degree centrality measure"));
NetA_degree_centrality(graph, deg);
}
if (betw_opt->answer || close_opt->answer) {
G_message(
_("Computing betweenness and/or closeness centrality measure"));
NetA_betweenness_closeness(graph, betw, closeness);
if (closeness)
for (i = 1; i <= nnodes; i++)
closeness[i] /= (double)In.dgraph.cost_multip;
}
if (eigen_opt->answer) {
G_message(_("Computing eigenvector centrality measure"));
NetA_eigenvector_centrality(graph, atoi(iter_opt->answer),
atof(error_opt->answer), eigen);
}
nlines = Vect_get_num_lines(&In);
G_message(_("Writing data into the table..."));
G_percent_reset();
for (i = 1; i <= nlines; i++) {
G_percent(i, nlines, 1);
int type = Vect_read_line(&In, Points, Cats, i);
if (type == GV_POINT && (!chcat || varray->c[i])) {
int cat, node;
if (!Vect_cat_get(Cats, nfield, &cat))
continue;
Vect_reset_cats(Cats);
Vect_cat_set(Cats, 1, cat);
Vect_write_line(&Out, type, Points, Cats);
node = Vect_find_node(&In, Points->x[0], Points->y[0], Points->z[0],
0, 0);
process_node(node, cat);
covered[node] = 1;
}
}
if (add_f->answer && !chcat) {
max_cat = 0;
for (i = 1; i <= nlines; i++) {
Vect_read_line(&In, NULL, Cats, i);
for (j = 0; j < Cats->n_cats; j++)
if (Cats->cat[j] > max_cat)
max_cat = Cats->cat[j];
}
max_cat++;
for (i = 1; i <= nnodes; i++)
if (!covered[i]) {
Vect_reset_cats(Cats);
Vect_cat_set(Cats, 1, max_cat);
NetA_add_point_on_node(&In, &Out, i, Cats);
process_node(i, max_cat);
max_cat++;
}
}
db_commit_transaction(driver);
db_close_database_shutdown_driver(driver);
G_free(covered);
if (deg)
G_free(deg);
if (closeness)
G_free(closeness);
if (betw)
G_free(betw);
if (eigen)
G_free(eigen);
Vect_build(&Out);
Vect_close(&In);
Vect_close(&Out);
exit(EXIT_SUCCESS);
}
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