1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 537 538 539 540 541 542 543 544 545 546 547 548 549 550 551 552 553 554 555 556 557 558 559 560 561 562 563 564 565 566 567 568 569 570 571 572 573 574 575 576 577 578 579 580 581 582 583 584 585 586 587 588 589 590 591 592 593 594 595 596 597 598 599 600 601 602 603 604 605 606 607 608 609 610 611 612 613 614 615 616 617 618 619 620 621 622 623 624 625 626 627 628 629 630 631 632 633 634 635 636 637 638 639 640 641 642 643 644 645 646 647 648 649 650 651 652 653 654 655 656 657 658 659 660 661 662 663 664 665 666 667 668 669 670 671 672 673 674 675 676 677 678 679 680 681 682 683 684 685 686 687 688 689 690 691 692 693 694 695 696 697 698 699 700 701 702 703 704 705 706 707 708 709 710 711 712 713 714 715 716 717 718 719 720 721 722 723 724 725 726 727 728 729 730 731 732 733 734 735 736 737 738 739 740 741 742 743 744 745 746 747 748 749 750 751 752 753 754 755 756 757 758 759 760 761 762 763 764 765 766 767 768 769 770 771 772 773 774 775 776 777 778 779 780 781 782 783 784 785 786 787 788 789 790 791 792 793 794 795 796 797 798 799 800 801 802 803 804 805 806 807 808 809 810 811 812 813 814 815 816 817 818 819 820 821 822 823 824 825 826 827 828 829 830 831 832 833 834 835 836 837 838 839 840 841 842 843 844 845 846 847 848 849 850 851 852 853 854 855 856 857 858 859 860 861 862 863 864 865 866 867 868 869 870 871 872 873 874 875 876 877 878 879 880 881 882 883 884 885 886 887 888 889 890 891 892 893 894 895 896 897 898 899 900 901 902 903 904 905 906 907 908 909 910 911 912 913 914 915 916 917 918 919 920 921 922 923 924 925 926 927 928 929 930 931 932 933 934 935 936 937 938 939 940 941 942 943 944 945 946 947 948 949 950 951 952 953 954 955 956 957 958 959 960 961 962 963 964 965 966 967 968 969 970 971 972 973 974 975 976 977 978 979 980 981 982 983 984 985 986 987 988 989 990 991 992 993 994 995 996 997 998 999 1000 1001 1002 1003 1004 1005 1006 1007 1008 1009 1010 1011 1012 1013 1014 1015 1016 1017 1018 1019 1020 1021 1022 1023 1024 1025 1026 1027 1028 1029 1030 1031 1032 1033 1034 1035 1036 1037 1038 1039 1040 1041 1042 1043 1044 1045 1046 1047 1048 1049 1050 1051 1052 1053 1054 1055 1056 1057 1058 1059 1060 1061 1062 1063 1064 1065 1066 1067 1068 1069 1070 1071 1072 1073 1074 1075 1076 1077 1078 1079 1080 1081 1082 1083 1084 1085 1086 1087 1088 1089 1090 1091 1092 1093 1094 1095 1096 1097 1098 1099 1100 1101 1102 1103 1104 1105 1106 1107 1108 1109 1110 1111 1112 1113 1114 1115 1116 1117 1118 1119 1120 1121 1122 1123 1124 1125 1126 1127 1128 1129 1130 1131 1132 1133 1134 1135 1136 1137 1138 1139 1140 1141 1142 1143 1144 1145 1146 1147 1148 1149 1150 1151 1152 1153 1154 1155 1156 1157 1158 1159 1160 1161 1162 1163 1164 1165 1166 1167 1168 1169 1170 1171 1172 1173 1174 1175 1176 1177 1178 1179 1180 1181 1182 1183 1184 1185 1186 1187 1188 1189 1190 1191 1192 1193 1194 1195 1196 1197 1198 1199 1200 1201 1202 1203 1204 1205 1206 1207 1208 1209 1210 1211 1212 1213 1214 1215 1216 1217 1218 1219 1220 1221 1222 1223 1224 1225 1226 1227 1228 1229 1230 1231 1232 1233 1234 1235 1236 1237 1238 1239 1240 1241 1242 1243 1244 1245 1246 1247 1248 1249 1250 1251 1252 1253 1254 1255 1256 1257 1258 1259 1260 1261 1262 1263 1264 1265 1266 1267 1268 1269 1270 1271 1272 1273 1274 1275 1276 1277 1278 1279 1280 1281 1282 1283 1284 1285 1286 1287 1288 1289 1290 1291 1292 1293 1294 1295 1296 1297 1298 1299 1300 1301 1302 1303 1304 1305 1306 1307 1308 1309 1310 1311 1312 1313 1314 1315 1316 1317 1318 1319 1320 1321 1322 1323 1324 1325 1326 1327 1328 1329 1330 1331 1332 1333 1334 1335 1336 1337 1338 1339 1340 1341 1342 1343 1344 1345 1346 1347 1348 1349 1350 1351 1352 1353 1354 1355 1356 1357 1358 1359 1360 1361 1362 1363 1364 1365 1366 1367 1368 1369 1370 1371 1372 1373 1374 1375 1376 1377 1378 1379 1380 1381 1382 1383 1384 1385 1386 1387 1388 1389 1390 1391 1392 1393 1394 1395 1396 1397 1398 1399 1400 1401 1402 1403 1404 1405 1406 1407 1408 1409 1410 1411 1412 1413 1414 1415 1416 1417 1418 1419 1420 1421 1422 1423 1424 1425 1426 1427 1428 1429 1430 1431 1432 1433 1434 1435 1436 1437 1438 1439 1440 1441 1442 1443 1444 1445 1446 1447 1448 1449 1450 1451 1452 1453 1454 1455 1456 1457 1458 1459 1460 1461 1462 1463 1464 1465 1466 1467 1468 1469 1470 1471 1472 1473 1474 1475 1476 1477 1478 1479 1480 1481 1482 1483 1484 1485 1486 1487 1488 1489 1490 1491 1492 1493 1494 1495 1496 1497 1498 1499 1500 1501 1502 1503 1504 1505 1506 1507 1508 1509 1510 1511 1512 1513 1514 1515 1516 1517 1518 1519 1520 1521 1522 1523 1524 1525 1526 1527 1528 1529 1530 1531 1532 1533 1534 1535 1536 1537 1538 1539 1540 1541 1542 1543 1544 1545 1546 1547 1548 1549 1550 1551 1552 1553 1554 1555 1556 1557 1558 1559 1560 1561 1562 1563 1564 1565 1566 1567 1568 1569 1570 1571 1572 1573 1574 1575 1576 1577 1578 1579 1580 1581 1582 1583 1584 1585 1586 1587 1588 1589 1590 1591 1592 1593 1594 1595 1596 1597 1598 1599 1600 1601 1602 1603 1604 1605 1606 1607 1608 1609 1610 1611 1612 1613 1614 1615 1616 1617 1618 1619 1620 1621 1622 1623 1624 1625 1626 1627 1628 1629 1630 1631 1632 1633 1634 1635 1636 1637 1638 1639 1640 1641 1642 1643 1644 1645 1646 1647 1648 1649 1650 1651 1652 1653 1654 1655 1656 1657 1658 1659 1660 1661 1662 1663 1664 1665 1666 1667 1668 1669 1670 1671 1672 1673 1674 1675 1676 1677 1678 1679 1680 1681 1682 1683 1684 1685 1686 1687 1688 1689 1690 1691 1692 1693 1694 1695 1696 1697 1698 1699 1700 1701 1702 1703 1704 1705 1706 1707 1708 1709 1710 1711 1712 1713 1714 1715 1716 1717 1718 1719 1720 1721 1722 1723 1724 1725 1726 1727 1728 1729 1730 1731 1732 1733 1734 1735 1736 1737 1738 1739 1740 1741 1742 1743 1744 1745 1746 1747 1748 1749 1750 1751 1752 1753 1754 1755 1756 1757 1758 1759 1760 1761 1762 1763 1764 1765 1766 1767 1768 1769 1770 1771 1772 1773 1774 1775 1776 1777 1778 1779 1780 1781 1782 1783 1784 1785 1786 1787 1788 1789 1790 1791 1792 1793 1794 1795 1796 1797 1798 1799 1800 1801 1802 1803 1804 1805 1806 1807 1808 1809 1810 1811 1812 1813 1814 1815 1816 1817 1818 1819 1820 1821 1822 1823 1824 1825 1826 1827 1828 1829 1830 1831 1832 1833 1834 1835 1836 1837 1838 1839 1840 1841 1842 1843 1844 1845 1846 1847 1848 1849 1850 1851 1852 1853 1854 1855 1856 1857 1858 1859 1860 1861 1862 1863 1864 1865 1866 1867 1868 1869 1870 1871 1872 1873 1874 1875 1876 1877 1878 1879 1880 1881 1882 1883 1884 1885 1886 1887 1888 1889 1890 1891 1892 1893 1894 1895 1896 1897 1898 1899 1900 1901 1902 1903 1904 1905 1906 1907 1908 1909 1910 1911 1912 1913 1914 1915 1916
|
'\" t
.\"___INFO__MARK_BEGIN__
.\"
.\" Copyright: 2004 by Sun Microsystems, Inc.
.\" Copyright (C) 2011, 2012, 2013 Dave Love, University of Liverpool
.\"
.\"___INFO__MARK_END__
.\"
.\" Some handy macro definitions [from Tom Christensen's man(1) manual page].
.\"
.de SB \" small and bold
.if !"\\$1"" \\s-2\\fB\&\\$1\\s0\\fR\\$2 \\$3 \\$4 \\$5
..
.\"
.de T \" switch to typewriter font
.ft CW \" probably want CW if you don't have TA font
..
.\"
.de TY \" put $1 in typewriter font
.if t .T
.if n ``\c
\\$1\c
.if t .ft P
.if n \&''\c
\\$2
..
.\" "
.de M \" man page reference
\\fI\\$1\\fR\\|(\\$2)\\$3
..
.de MO \" other man page reference
\\fI\\$1\\fR\\|(\\$2)\\$3
..
.\"
.de URL
\\$2 \(laURL: \\$1 \(ra\\$3
..
.if \n[.g] .mso www.tmac
.TH xxQS_NAME_Sxx_CONF 5 2011-11-27 "xxRELxx" "xxQS_NAMExx File Formats"
.\"
.SH NAME
xxqs_name_sxx_conf \- xxQS_NAMExx configuration files
.\"
.\"
.SH DESCRIPTION
.I xxqs_name_sxx_conf
defines the global and local xxQS_NAMExx configurations and can be
shown/modified by
.M qconf 1
using the \-sconf/\-mconf options. Only root or the cluster administrator may
modify
.I xxqs_name_sxx_conf.
.PP
At its initial start-up,
.M xxqs_name_sxx_qmaster 8
checks to see if a valid xxQS_NAMExx configuration is available at a
well known location in the xxQS_NAMExx internal directory hierarchy.
If so, it loads that configuration information and proceeds.
If not,
.M xxqs_name_sxx_qmaster 8
writes a generic configuration containing default values to that same
location.
The xxQS_NAMExx execution daemons
.M xxqs_name_sxx_execd 8
upon start-up retrieve their configuration from
.M xxqs_name_sxx_qmaster 8 .
.PP
The actual configuration for both
.M xxqs_name_sxx_qmaster 8
and
.M xxqs_name_sxx_execd 8
is a superposition of a \fIglobal\fP configuration and
a \fIlocal\fP configuration pertinent for the host on which
a master or execution daemon resides.
If a local configuration is available, its entries overwrite the
corresponding entries of the global configuration. \fBNote:\fP The local
configuration does not have to contain all valid configuration entries,
but only those which need to be modified against the global entries.
.PP
Note: xxQS_NAMExx allows backslashes (\\) be used to escape newline
characters. The backslash and the newline are replaced with a
space (" ") character before any interpretation.
.\"
.\"
.SH FORMAT
.\"
The paragraphs that follow provide brief descriptions of the individual
parameters that compose the global and local configurations for a
xxQS_NAMExx cluster:
.\"
.\"
.SS "\fBexecd_spool_dir\fP"
The execution daemon spool directory path. Again, a feasible spool
directory requires read/write access permission for root. The entry in
the global configuration for this parameter can be overwritten by
execution host local configurations, i.e. each
.M xxqs_name_sxx_execd 8
may have a private spool directory with a different path, in which case
it needs to provide read/write permission for the root account of the
corresponding execution host only.
.PP
Under \fBexecd_spool_dir\fP a directory named corresponding
to the unqualified hostname of the execution host is opened and
contains all information spooled to disk. Thus, it is possible for the
\fBexecd_spool_dir\fPs of all execution hosts to physically reference the
same directory path
(the root access restrictions mentioned above need to be met, however).
.PP
Changing the global \fBexecd_spool_dir\fP
parameter set at installation time is not supported
in a running system. If the change should still be done
it is required to restart all affected execution daemons. Please make sure running
jobs have finished before doing so,
otherwise running jobs will be lost.
.PP
The default location for the execution daemon spool
directory is $xxQS_NAME_Sxx_ROOT/$xxQS_NAME_Sxx_CELL/spool.
.PP
The global configuration entry for this value
may be overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBmailer\fP"
\fBmailer\fP is the absolute pathname to the electronic mail delivery
agent on your system. An optional prefix "user@" specifies the user
under which this procedure is to be started; the default is root.
The mailer must accept the following syntax:
.PP
.RS
mailer \-s <subject-of-mail-message> <recipient>
.RE
.PP
Each
.M xxqs_name_sxx_execd 8
may use a private mail agent. Changing \fBmailer\fP will take
immediate effect.
.PP
The default for \fBmailer\fP depends on the operating system of
the host on which the xxQS_NAMExx master installation was run. Common
values are /bin/mail or /usr/bin/Mail.
Note that since the mail is sent by compute hosts, not the master, it
may be necessary to take steps to route it appropriately, e.g. by
using a cluster head node as a "smart host" for the private network.
.PP
The global configuration entry for this value
may be overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBxterm\fP"
.B xterm
is the absolute pathname to the X Window System terminal emulator,
.MO xterm 1 .
.PP
Changing \fBxterm\fP will take immediate effect.
.PP
The default for \fBxterm\fP is system-dependent.
.PP
The global configuration entry for this value
may be overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBload_sensor\fP"
A comma-separated list of executable shell script paths or programs
to be started by
.M xxqs_name_sxx_execd 8
and to be used in order to retrieve site-configurable load information
(e.g. free space on a certain disk partition).
.PP
Each
.M xxqs_name_sxx_execd 8
may use a set of private
.B load_sensor
programs or scripts. Changing
.B load_sensor
will take effect after two load report intervals (see
\fBload_report_time\fP). A load sensor will be restarted automatically if
the file modification time of the load sensor executable changes.
.PP
The global configuration entry for this value
may be overwritten by the execution host local configuration.
.PP
In addition to the load sensors configured via
\fBload_sensor\fP,
.M xxqs_name_sxx_exec 8
searches for an executable file named
.I qloadsensor
in the execution host's xxQS_NAMExx binary directory path.
If such a file is found, it is treated like the configurable load sensors
defined in \fBload_sensor\fP. This facility is intended for pre-installing
a default load sensor. See
.M sge_execd 8
for information on writing load sensors.
.\"
.\"
.SS "\fBprolog\fP"
The path of an executable, with optional arguments, that is started before execution
of xxQS_NAMExx jobs with the same environment setting as that for the
xxQS_NAMExx
jobs to be started afterwards (see
.M qsub 1 ).
The prolog command is started directly, not in a shell.
An optional prefix "user@" specifies the user under which this procedure
is to be started. In that case see the SECURITY section below
concerning security issues running as a privileged user.
The procedure's standard
output and the error output stream are written to the same file as used for
the standard output and error output of each job.
.PP
This procedure is intended as a means
for the xxQS_NAMExx administrator to automate the execution of general
site-specific tasks, like the preparation of temporary file systems, with a
need for the same context information as the job.
For a parallel job, only a single instance of the prolog is run, on the
master node.
Each
.M xxqs_name_sxx_execd 8
may use a private prolog.
Correspondingly, the global or execution host local
configuration can be overwritten by the queue configuration (see
.M queue_conf 5 ).
Changing \fBprolog\fP will take
immediate effect.
.PP
The default for \fBprolog\fP is the special value NONE, which prevents
execution of a prolog.
.PP
The following special
variables, expanded at runtime, can be used (besides any other
strings which have to be interpreted by the procedure) to compose
a command line:
.IP "\fI$host\fP"
The name of the host on which the prolog or epilog procedures are
started.
.IP "\fI$ja_task_id\fP"
The array job task index (0 if not an array job).
.IP "\fI$job_owner\fP"
The user name of the job owner.
.IP "\fI$job_id\fP"
xxQS_NAMExx's unique job identification number.
.IP "\fI$job_name\fP"
The name of the job.
.IP "\fI$processors\fP"
The \fBprocessors\fP string as contained in the queue configuration
(see
.M queue_conf 5 )
of the master queue (the queue in which the prolog and epilog procedures
are started).
.IP "\fI$queue\fP"
The cluster queue name of the master queue instance, i.e. the cluster
queue in which the prolog and epilog procedures are started.
.IP "\fI$stdin_path\fP"
The pathname of the stdin file. This is always /dev/null for prolog,
pe_start, pe_stop and epilog. It is the pathname of the
stdin file for the job in the job script. When delegated file staging is enabled,
this path is set
to $fs_stdin_tmp_path. When delegated file staging is not enabled, it is the stdin
pathname given via DRMAA or qsub.
.IP "\fI$stdout_path\fP"
.IP "\fI$stderr_path\fP"
The pathname of the stdout/stderr file. This always points to the
output/error file. When delegated file staging is enabled, this path is set to
$fs_stdout_tmp_path/$fs_stderr_tmp_path. When delegated file staging is not
enabled, it is the stdout/stderr pathname given via DRMAA or qsub.
.IP "\fI$merge_stderr\fP"
If this flag is 1, stdout and stderr are merged in one file, the stdout file.
Otherwise (the default), no merging is done.
Merging of stderr and stdout can be requested via the DRMAA job template attribute 'drmaa_join_files' (see
.M drmaa_attributes 3 )
or the qsub parameter '\-j y' (see
.M qsub 1 ).
.IP "\fI$fs_stdin_host\fP"
When delegated file staging is requested for the stdin file, this is the name of
the host where the stdin file has to be copied from before the job is started.
.IP "\fI$fs_stdout_host\fP"
.IP "\fI$fs_stderr_host\fP"
When delegated file staging is requested for the stdout/stderr file, this is the
name of the host where the stdout/stderr file has to be copied to after the job has run.
.IP "\fI$fs_stdin_path\fP"
When delegated file staging is requested for the stdin file, this is the pathname
of the stdin file on the host $fs_stdin_host.
.IP "\fI$fs_stdout_path\fP"
.IP "\fI$fs_stderr_path\fP"
When delegated file staging is requested for the stdout/stderr file, this is the
pathname of the stdout/stderr file on the host $fs_stdout_host/$fs_stderr_host.
.IP "\fI$fs_stdin_tmp_path\fP"
When delegated file staging is requested for the stdin file, this is the destination
pathname of the stdin file on the execution host. The prolog must copy the
stdin file from $fs_stdin_host:$fs_stdin_path to localhost:$fs_stdin_tmp_path to
establish delegated file staging of the stdin file.
.IP "\fI$fs_stdout_tmp_path\fP"
.IP "\fI$fs_stderr_tmp_path\fP"
When delegated file staging is requested for the stdout/stderr file, this is the
source pathname of the stdout/stderr file on the execution host. The epilog
must copy the stdout file from localhost:$fs_stdout_tmp_path to
$fs_stdout_host:$fs_stdout_path (the stderr file from localhost:$fs_stderr_tmp_path
to $fs_stderr_host:$fs_stderr_path) to establish delegated file staging of the
stdout/stderr file.
.IP "\fI$fs_stdin_file_staging\fP"
.IP "\fI$fs_stdout_file_staging\fP"
.IP "\fI$fs_stderr_file_staging\fP"
When delegated file staging is requested for the stdin/stdout/stderr file, the flag
is set to "1", otherwise it is set to "0" (see in \fBdelegated_file_staging\fP how
to enable delegated file staging).
These three flags correspond to the DRMAA job template attribute 'drmaa_transfer_files' (see
.M drmaa_attributes 3 ).
.PP
If the prolog is written in shell script, the usual care must be
exercised, e.g. when expanding such values from the command line or
the environment which are user-supplied. In particular, note that the
job name could be of the form "; evil doings;". Also, use absolute
path names for commands if inheriting the user's environment.
.PP
The global configuration entry for this value
may be overwritten by the execution host local configuration.
.PP
See
.M xxqs_name_sxx_shepherd 8
for the significance of exit codes returned by the prolog.
.\"
.\"
.SS "\fBepilog\fP"
The path of an executable, with optional argument, that is started after execution
of xxQS_NAMExx jobs with the same environment setting as that for the
xxQS_NAMExx
job that has just completed (see
.M qsub 1 ),
with the addition of the variable named
.B SGE_JOBEXIT_STAT
which holds the exit status of the job.
The epilog command is started directly, not in a shell.
An optional prefix "user@" specifies the
user under which this procedure is to be started. In that case see
the SECURITY section below concerning security issues running as a
privileged user.
The procedure's standard
output and the error output stream are written to the same file used for
the standard output and error output of each job.
.PP
The same special variables can be used to compose a command line as
for the prolog.
.PP
This procedure is intended as a means
for the xxQS_NAMExx administrator to automate the execution of general
site-specific tasks, like the cleaning up of temporary file systems with the
need for the same context information as the job.
For a parallel job, only a single instance of the epilog is run, on the
master node.
Each
.M xxqs_name_sxx_execd 8
may use a private epilog.
Correspondingly, the global or execution host local
configurations can be overwritten by the queue configuration (see
.M queue_conf 5 ).
Changing \fBepilog\fP will take
immediate effect.
.PP
The default for \fBepilog\fP is the special value NONE, which prevents
execution of an epilog.
The same special variables as for \fBprolog\fP can be
used to constitute a command line.
.PP
The same considerations (above) apply as for a prolog when an epilog
is written in shell script.
.PP
See
.M xxqs_name_sxx_shepherd 8
for the significance of exit codes returned by the epilog.
.\"
.\"
.SS "\fBshell_start_mode\fP"
.B Note:
Deprecated, may be removed in future release.
.br
This parameter defines the mechanisms which are used to actually
invoke the job scripts on the execution hosts. The following
values are recognized:
.IP \fIunix_behavior\fP
If a user starts a job shell script under UNIX interactively by
invoking it just with the script name the operating system's executable
loader uses the information provided in a comment such as `#!/bin/csh' in
the first line of the script to detect which command interpreter to
start to interpret the script. This mechanism is used by xxQS_NAMExx when
starting jobs if \fIunix_behavior\fP is defined as \fBshell_start_mode\fP.
.\"
.IP \fIposix_compliant\fP
POSIX does not consider first script line comments such a `#!/bin/csh'
as significant. The POSIX standard for batch queueing systems
(P1003.2d) therefore requires a compliant queueing system to ignore
such lines, but to use user-specified or configured default command
interpreters instead. Thus, if \fBshell_start_mode\fP is set to
\fIposix_compliant\fP xxQS_NAMExx will either use the command interpreter
indicated by the \fB\-S\fP option of the
.M qsub 1
command or the \fBshell\fP parameter of the queue to be used (see
.M queue_conf 5
for details).
.\"
.IP \fIscript_from_stdin\fP
Setting the \fBshell_start_mode\fP parameter either to \fIposix_compliant\fP
or \fIunix_behavior\fP requires you to set the umask in use for
.M xxqs_name_sxx_execd 8
such that every user has read access to the active_jobs directory in the
spool directory of the corresponding execution daemon. In case you have
\fBprolog\fP and \fBepilog\fP scripts configured, they also need to be
readable by any user who may execute jobs.
.br
If this violates your
site's security policies you may want to set \fBshell_start_mode\fP
to \fIscript_from_stdin\fP. This will force xxQS_NAMExx to open the
job script as well as the epilog and prolog scripts for reading into
STDIN as root (if
.M xxqs_name_sxx_execd 8
was started as root) before changing to the job owner's user account.
The script is then fed into the STDIN stream of the command interpreter
indicated by the \fB\-S\fP option of the
.M qsub 1
command or the \fBshell\fP parameter of the queue to be used (see
.M queue_conf 5
for details).
.br
Thus setting \fBshell_start_mode\fP to \fIscript_from_stdin\fP also
implies \fIposix_compliant\fP behavior. \fBNote\fP, however, that
feeding scripts into the STDIN stream of a command interpreter may
cause trouble if commands like
.MO rsh 1
are invoked inside a job script as they also process the STDIN
stream of the command interpreter. These problems can usually be
resolved by redirecting the STDIN channel of those commands to come
from /dev/null (e.g. rsh host date < /dev/null). \fBNote also\fP, that any
command-line options associated with the job are passed to the executing
shell. The shell will only forward them to the job if they are not
recognized as valid shell options.
.PP
Changes to \fBshell_start_mode\fP will take immediate effect.
The default for \fBshell_start_mode\fP is \fIposix_compliant\fP.
.PP
This value is a global configuration parameter only. It cannot be
overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBlogin_shells\fP"
UNIX command interpreters like the Bourne-Shell (see
.MO sh 1 )
or the C-Shell (see
.MO csh 1 )
can be used by xxQS_NAMExx to start job scripts. The command interpreters
can either be started as login-shells (i.e. all system and user default
resource files like .login or .profile will be executed when the
command interpreter is started, and the environment for the job will be
set up as if the user has just logged in) or just for command execution
(i.e. only shell-specific resource files like .cshrc will be executed
and a minimal default environment is set up by xxQS_NAMExx \- see
.M qsub 1 ).
The parameter \fBlogin_shells\fP contains a comma-separated list of the
executable names of the command interpreters to be started as login shells.
Shells in this list are only started as login shells if the parameter
\fBshell_start_mode\fP (see above) is set to \fIposix_compliant\fP.
.PP
Changes to \fBlogin_shells\fP will take immediate effect.
The default for \fBlogin_shells\fP is sh,bash,csh,tcsh,ksh.
.PP
This value is a global configuration parameter only. It cannot be
overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBmin_uid\fP"
\fBmin_uid\fP places a lower bound on user IDs that may use the cluster. Users
whose user ID (as returned by
.MO getpwnam 3 )
is less than \fBmin_uid\fP will not be allowed to run jobs on the cluster.
.PP
Changes to \fBmin_uid\fP will take immediate effect. The default is 0
but, if CSP or MUNGE security is not in use, the installation script sets it to
100 to prevent unauthorized access by root or system accounts.
.PP
This value is a global configuration parameter only. It cannot be
overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBmin_gid\fP"
This parameter sets the lower bound on group IDs that may use the cluster.
Users whose default group ID (as returned by
.MO getpwnam 3 )
is less than \fBmin_gid\fP will not be allowed to run jobs on the cluster.
.PP
Changes to \fBmin_gid\fP will take immediate effect. The default is 0
but, if CSP security is not in use, the installation script sets it to
100 to prevent unauthorized access by root or system accounts.
.PP
This value is a global configuration parameter only. It cannot be
overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBuser_lists \fP"
The \fBuser_lists\fP parameter contains a comma-separated list of
user access lists as described in
.M access_list 5 .
Each user contained in at least one of the access lists has
access to the cluster. If the \fBuser_lists\fP parameter is set to
NONE (the default) any user has access if not explicitly excluded
via the \fBxuser_lists\fP parameter described below.
If a user is contained both in an access list \fBxuser_lists\fP
and \fBuser_lists\fP, the user is denied access to the cluster.
.PP
Changes to \fBuser_lists\fP will take immediate effect.
.PP
This value is a global configuration parameter insofar as it restricts
access to the whole cluster, but the execution host local
configuration may define a value to restrict access to that host further.
.\"
.\"
.SS "\fBxuser_lists \fP"
The \fBxuser_lists\fP parameter contains a comma-separated list of
user access lists as described in
.M access_list 5 .
Each user contained in at least one of the access lists is denied
access to the cluster. If the \fBxuser_lists\fP parameter is set to
NONE (the default) any user has access.
If a user is contained both in an access list in \fBxuser_lists\fP
and \fBuser_lists\fP (see above) the user is denied access to the cluster.
.PP
Changes to \fBxuser_lists\fP will take immediate effect.
.PP
This value is a global configuration parameter insofar as it restricts
access to the whole cluster, but the execution host local
configuration may define a value to restrict access to that host further.
.\"
.\"
.SS "\fBadministrator_mail\fP"
\fBadministrator_mail\fP specifies a comma-separated list of the
electronic mail address(es) of the cluster administrator(s) to whom
internally-generated problem reports are sent. The mail address format
depends on your electronic mail system and how it is configured;
consult your system's configuration guide for more information.
.PP
Changing \fBadministrator_mail\fP takes immediate effect.
The default for \fBadministrator_mail\fP is an empty mail list.
.PP
This value is a global configuration parameter only. It cannot be
overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBprojects\fP"
.PP
The \fBprojects\fP list contains all projects which are granted access
to xxQS_NAMExx. Users not belonging to one of these projects cannot
submit jobs. If
users belong to projects in the \fBprojects\fP list and the
\fBxprojects\fP list (see below), they also cannot submit jobs.
.PP
Changing \fBprojects\fP takes immediate effect.
The default for \fBprojects\fP is none.
.PP
While globally-configured projects affect job submission, projects
configured for queues or hosts affect job execution in the appropriate
context.
.\"
.\"
.SS "\fBxprojects\fP"
The \fBxprojects\fP list contains all projects that are denied access
to xxQS_NAMExx. Users belonging to one of these projects cannot use xxQS_NAMExx. If
users belong to projects in the \fBprojects\fP list (see above) and the
\fBxprojects\fP list, they also cannot use the system.
.PP
Changing \fBxprojects\fP takes immediate effect.
The default for \fBxprojects\fP is none.
.PP
This value is a global configuration parameter only. It cannot be
overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBload_report_time\fP"
System load is reported periodically by the execution daemons to
.M xxqs_name_sxx_qmaster 8 .
The parameter \fBload_report_time\fP defines the time interval between load
reports.
.PP
Each
.M xxqs_name_sxx_execd 8
may use a different load report time. Changing \fBload_report_time\fP will
take immediate effect.
.PP
\fBNote:\fP Be careful
when modifying \fBload_report_time\fP. Reporting load too frequently
might block
.M xxqs_name_sxx_qmaster 8
especially if the number of execution hosts is large. Moreover, since the
system load typically increases and decreases smoothly, frequent load
reports hardly offer any benefit.
.PP
The default for \fBload_report_time\fP is 40 seconds.
.PP
The global configuration entry for this value
may be overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBreschedule_unknown\fP"
Determines whether jobs on hosts in an unknown state
are rescheduled, and thus sent to other hosts. Hosts
are registered as unknown if
.M xxqs_name_sxx_master 8
cannot establish contact to the
.M xxqs_name_sxx_execd 8
on those hosts (see
.BR max_unheard ).
Likely reasons are a breakdown of
the host or a breakdown of the network connection in between, but also
.M xxqs_name_sxx_execd 8
may not be executing on such hosts.
.PP
In any case, xxQS_NAMExx can reschedule jobs running on such hosts to
another system.
.B reschedule_unknown
controls the time which
xxQS_NAMExx will wait before jobs are rescheduled after a host became
unknown. The time format specification is hh:mm:ss. If the special
value 00:00:00 is set, then jobs will not be rescheduled from this host.
.PP
Rescheduling is only initiated for jobs which have activated the rerun flag
(see the
.B \-r y
option of
.M qsub 1
and the
.B rerun
option of
.M queue_conf 5 ).
Parallel jobs are only rescheduled if the host on which their
master task executes is in unknown state. The behavior of
.B reschedule_unknown
for parallel jobs and for jobs without the rerun flag set can be
adjusted using the \fBqmaster_params\fP settings
.B ENABLE_RESCHEDULE_KILL
and
.B ENABLE_RESCHEDULE_SLAVE.
.PP
Checkpointing jobs will only be
rescheduled when the
.B when
option of the corresponding checkpointing environment contains an
appropriate flag. (see
.M checkpoint 5 ).
Interactive jobs (see
.M qsh 1 ,
.M qrsh 1 ,
.M qtcsh 1 )
are not rescheduled.
.PP
The default for
.B reschedule_unknown
is 00:00:00
.PP
The global configuration entry for this value may be overwritten by
the execution host local configuration.
.\"
.\"
.SS "\fBmax_unheard\fP"
If
.M xxqs_name_sxx_qmaster 8
could not contact, or was not contacted by, the execution daemon of a host
for \fBmax_unheard\fP seconds, all queues residing on that particular host
are set to status unknown.
.M xxqs_name_sxx_qmaster 8 ,
at least,
should be contacted by the execution daemons in order to get the load
reports. Thus, \fBmax_unheard\fP should be greater than the
\fBload_report_time\fP (see above).
.PP
Changing \fBmax_unheard\fP takes immediate effect.
The default for \fBmax_unheard\fP is 5 minutes.
.PP
This value is a global configuration parameter only. It cannot be
overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBloglevel\fP"
This parameter specifies the level of detail that xxQS_NAMExx components such
as
.M xxqs_name_sxx_qmaster 8
or
.M xxqs_name_sxx_execd 8
use to produce informative, warning or error messages which are logged
to the \fImessages\fP files in the master and execution daemon
spool directories (see the description of the
\fBexecd_spool_dir\fP parameter above). The following message
levels are available:
.\"
.IP "\fIlog_err\fP"
All error events recognized are logged.
.\"
.IP "\fIlog_warning\fP"
All error events recognized, and all detected signs of
potentially erroneous behavior, are logged.
.\"
.IP "\fIlog_info\fP"
All error events recognized, all detected signs of
potentially erroneous behavior, and a variety of informative
messages are logged.
.PP
Changing \fBloglevel\fP will take immediate effect.
.PP
The default for \fBloglevel\fP is \fIlog_warning\fP.
.PP
This value is a global configuration parameter only. It cannot be
overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBmax_aj_instances\fP"
This parameter defines the maximum number of array tasks to be scheduled to
run simultaneously per array job. An instance of an array task will be
created within the master daemon when it gets a start order from the
scheduler. The instance will be destroyed when the array task finishes.
Thus the parameter provides control mainly over the memory consumption of
array jobs in the master daemon. It is most useful for very
large clusters and very large array jobs. The default for this parameter
is 2000. The value 0 will deactivate this limit and will allow the
scheduler to start as many array job tasks as suitable resources are
available in the cluster.
.PP
Changing \fBmax_aj_instances\fP will take immediate effect.
.PP
This value is a global configuration parameter only. It cannot be
overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBmax_aj_tasks\fP"
This parameter defines the maximum number of array job tasks within an array
job.
.M xxqs_name_sxx_qmaster 8
will reject all array job submissions which request
more than
.B max_aj_tasks
array job tasks. The default for this parameter is 75000. The value 0
will deactivate this limit.
.PP
Changing \fBmax_aj_tasks\fP will take immediate effect.
.PP
This value is a global configuration parameter only. It cannot be
overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBmax_u_jobs\fP"
The number of active (not finished) jobs which each xxQS_NAMExx user can
have in the system simultaneously is controlled by this parameter. A value
greater than 0 defines the limit. The default value 0 means "unlimited". If
the
.B max_u_jobs
limit is exceeded by a job submission then the submission command exits
with exit status 25 and an appropriate error message.
.PP
Changing \fBmax_u_jobs\fP will take immediate effect.
.PP
This value is a global configuration parameter only. It cannot be
overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBmax_jobs\fP"
The number of active (not finished) jobs simultaneously allowed in xxQS_NAMExx
is controlled by this parameter. A value greater than 0 defines the limit.
The default value 0 means "unlimited". If the
.B max_jobs
limit is exceeded by a job submission then the submission command exits
with exit status 25 and an appropriate error message.
.PP
Changing \fBmax_jobs\fP will take immediate effect.
.PP
This value is a global configuration parameter only. It cannot be
overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBmax_advance_reservations\fP"
The number of active (not finished) Advance Reservations simultaneously
allowed in xxQS_NAMExx is controlled by this parameter. A value greater
than 0 defines the limit. The default value 0 means "unlimited". If the
.B max_advance_reservations
limit is exceeded by an Advance Reservation request then the submission
command exits with exit status 25 and an appropriate error message.
.PP
Changing \fBmax_advance_reservations\fP will take immediate effect.
.PP
This value is a global configuration parameter only. It cannot be
overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBenforce_project\fP"
If set to \fItrue\fP, users are required to request a project whenever
submitting a job. See the \fB\-P\fP option to
.M qsub 1
for details.
.PP
Changing \fBenforce_project\fP will take immediate effect.
The default for \fBenforce_project\fP is \fIfalse\fP.
.PP
.PP
This value is a global configuration parameter only. It cannot be
overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBenforce_user\fP"
If set to \fItrue\fP, a
.M user 5
must exist to allow for job submission. Jobs are rejected if no corresponding user
exists.
.PP
If set to \fIauto\fP, a
.M user 5
object for the submitting user will automatically be created during
job submission, if one does not already exist. The \fBauto_user_oticket\fP,
\fBauto_user_fshare\fP, \fBauto_user_default_project\fP, and
\fBauto_user_delete_time\fP configuration parameters will be used as
default attributes of the new
.M user 5
object.
.PP
Changing \fBenforce_user\fP will take immediate effect.
The default for \fBenforce_user\fP is \fIauto\fP.
.PP
This value is a global configuration parameter only. It cannot be
overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBauto_user_oticket\fP"
The number of override tickets to assign to automatically created
.M user 5
objects. User objects are created automatically if the
.B enforce_user
attribute is set to \fIauto\fP.
.
.PP
Changing
.B auto_user_oticket
will affect any newly created user objects, but will not change user
objects created in the past.
.PP
This value is a global configuration parameter only. It cannot be
overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBauto_user_fshare\fP"
The number of functional shares to assign to automatically created
.M user 5
objects. User objects are created automatically if the
.B enforce_user
attribute is set to \fIauto\fP.
.
.PP
Changing
.B auto_user_fshare
will affect any newly created user objects, but will not change user
objects created in the past.
.PP
This value is a global configuration parameter only. It cannot be
overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBauto_user_default_project\fP"
The default project to assign to automatically created
.M user 5
objects. User objects are created automatically if the
.B enforce_user
attribute is set to \fIauto\fP.
.PP
Changing
.B auto_user_default_project
will affect any newly created user objects, but will not change user
objects created in the past.
.PP
This value is a global configuration parameter only. It cannot be
overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBauto_user_delete_time\fP"
The number of seconds of inactivity after which automatically created
.M user 5
objects will be deleted. User objects are created automatically if the
.B enforce_user
attribute is set to \fIauto\fP. If the user has no active or pending
jobs for the specified amount of time, the
object will automatically be deleted. A value of 0 can be used to
indicate that the automatically created user object is permanent and
should not be automatically deleted.
.PP
Changing
.B auto_user_delete_time
will affect the deletion time for all users with active jobs.
.PP
This value is a global configuration parameter only. It cannot be
overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBset_token_cmd\fP"
\fBNB. If the qmaster spool area is world-readable for non-admin
users, you must take steps to encrypt the credentials, since they are
stored there after job submission.\fP
.br
\fBSet_token_cmd\fP points to a command which sets and extends AFS
tokens for xxQS_NAMExx jobs. It is run by
.M xxqs_name_sxx_coshepherd 8 .
It expects two command line parameters:
.PP
.RS
.nf
<set_token_cmd> <user> <token_extend_after_seconds>
.fi
.RE
It reads the token from STDIN, extends its
expiration time, and re-sets the token.
As a shell script this command will call the programs:
.PP
.RS
.nf
- SetToken
- forge
.fi
.RE
.PP
which are provided by your distributor as source code. The script looks as
follows:
.PP
.RS
.nf
--------------------------------
#!/bin/sh
# set_token_cmd
forge \-u $1 \-t $2 | SetToken
--------------------------------
.fi
.RE
.PP
Since it is necessary for \fIforge\fP to read the secret AFS server
key, a site might wish to replace the \fBset_token_cmd\fP script by a
command, which connects to a custom daemon at the AFS server. The
token must be forged at the AFS server and returned to the local
machine, where \fISetToken\fP is executed.
.PP
Changing \fBset_token_cmd\fP will take immediate effect.
The default for \fBset_token_cmd\fP is none.
.PP
The global configuration entry for this value
may be overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBpag_cmd\fP"
The path to your \fIpagsh\fP is specified via this parameter.
The
.M xxqs_name_sxx_shepherd 8
process and the job run in a \fIpagsh\fP. Please ask your AFS administrator
for details.
.PP
Changing \fBpag_cmd\fP will take immediate effect.
The default for \fBpag_cmd\fP is none.
.PP
The global configuration entry for this value
may be overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBtoken_extend_time\fP"
The \fBtoken_extend_time\fP is the time period for which AFS tokens are periodically
extended. xxQS_NAMExx
will call the token extension 30 minutes before the tokens expire until
jobs have finished and the corresponding tokens are no longer required.
.PP
Changing \fBtoken_extend_time\fP will take immediate effect.
The default for \fBtoken_extend_time\fP is 24:0:0, i.e. 24 hours.
.PP
The global configuration entry for this value
may be overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBshepherd_cmd\fP"
.br
Alternative path to the \fBshepherd_cmd\fP binary. Typically used to call
the shepherd binary by a wrapper script or command. If used in
production, this must take care to handle signals the way the shepherd
would or, for instance, jobs will not be killed correctly.
.PP
Changing \fBshepherd_cmd\fP will take immediate effect. The default
for \fBshepherd_cmd\fP is none.
.PP
The global configuration entry for this value
may be overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBgid_range\fP"
The \fBgid_range\fP
is a comma-separated list of range expressions of the form
\fIm\fP\fB\-\fP\fIn\fP, where
.I m
and
.I n
are integer numbers greater than 99, and
.I m
is an abbreviation for
\fIm\fP\fB\-\fP\fIm\fP.
These numbers are used in
.M xxqs_name_sxx_execd 8
to identify processes belonging to the same job.
.PP
Each
.M xxqs_name_sxx_execd 8
may use a separate set of group ids for this purpose.
All numbers in the group id range have to be unused
supplementary group ids on the system, where the
.M xxqs_name_sxx_execd 8
is started.
.PP
Changing \fBgid_range\fP will take immediate effect.
There is no default for \fBgid_range\fP. The administrator will have to
assign a value for \fBgid_range\fP during installation of xxQS_NAMExx.
.PP
The global configuration entry for this value
may be overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBqmaster_params\fP"
A list of additional parameters can be passed to the
xxQS_NAMExx qmaster. The following values are recognized:
.IP "\fIENABLE_ENFORCE_MASTER_LIMIT\fP"
If this parameter is set then the \fBs_rt\fP, \fBh_rt\fP limits of a running job
are tested and acted on by the
.M xxqs_name_sxx_qmaster 8
when the
.M xxqs_name_sxx_execd 8
where the job was run is in an unknown state.
.sp 1
After the \fBs_rt\fP or \fBh_rt\fP limit of a job is expired, the master daemon will
wait additional time defined by \fBDURATION_OFFSET\fP (see
.M sched_conf 5 ).
If the execution daemon still cannot be contacted when this
additional time is elapsed, then the master daemon will force
the deletion of the job (see \fB-f\fP of
.M qdel 1 ).
.sp 1
For jobs which will be deleted that way, an accounting record will be created.
For usage, the record will contain the last reported online value when the
execution daemon could contact qmaster. The \fBfailed\fP state in the record
will be set to 37 to indicate that the job was terminated by a limit
enforced by the master daemon.
.sp 1
After the restart of
.M xxqs_name_sxx_qmaster 8
the limit enforcement will be triggered after twice the
biggest \fBload_report_interval\fP interval defined in
.M xxqs_name_sxx_conf 5
has elapsed. This will give the execution daemons enough time to
re-register with the master daemon.
.\"
.IP "\fIENABLE_FORCED_QDEL_IF_UNKNOWN\fP"
If this parameter is set then a deletion request for a job is automatically interpreted
as a forced deletion request (see \fB\-f\fP of
.M qdel 1 )
if the host where the job is running is in an unknown state.
.\"
.IP "\fIENABLE_FORCED_QDEL\fP"
If this parameter is set, non-administrative users can force deletion of
their own jobs via the \fI\-f\fP option of
.M qdel 1 .
Without this parameter, forced deletion of jobs is only allowed by the
xxQS_NAMExx manager or operator.
.sp 1
\fBNote:\fP Forced deletion for jobs is executed differently, depending
on whether users are xxQS_NAMExx administrators or not. In the case of
administrative users, the jobs are removed from the internal database of
xxQS_NAMExx immediately. For regular users, the equivalent of a normal
.M qdel 1
is executed first, and deletion is forced only if the normal cancellation
was unsuccessful.
.\"
.IP "\fIFORBID_RESCHEDULE\fP"
If this parameter is set, re-queueing of jobs cannot
be initiated by the job script which is under control
of the user. Without this parameter, jobs returning the
value 99 are rescheduled. This can be used to cause the
job to be restarted on a different machine, for instance if there
are not enough resources on the current one.
.PP
.IP "\fIFORBID_APPERROR\fP"
If this parameter is set, the application cannot set itself to the error state.
Without this parameter jobs returning the value 100 are set to the error state
(and therefore can be manually rescheduled by clearing the error state).
This can be used to set the job to the error state when a starting condition
of the application is not fulfilled before the application itself has been
started, or when a clean up procedure (e.g. in the epilog) decides that it is
necessary to run the job again. To do so, return 100 in the prolog, pe_start,
job script, pe_stop or epilog script.
.PP
.IP "\fIDISABLE_AUTO_RESCHEDULING\fP"
.B Note:
Deprecated, may be removed in future release.
.br
If set to "true" or "1", the \fIreschedule_unknown\fP parameter
is not taken into account.
.PP
.IP "\fIENABLE_RESCHEDULE_KILL\fP"
If set to "true" or "1", the \fIreschedule_unknown\fP parameter
affects also jobs which have the rerun flag not activated
(see the
.B \-r y
option of
.M qsub 1
and the
.B rerun
option of
.M queue_conf 5 ),
but they are just finished as they can't be rescheduled.
.PP
.IP "\fIENABLE_RESCHEDULE_SLAVE\fP"
If set to "true" or "1" xxQS_NAMExx triggers job rescheduling also when
the host where the slave tasks of a parallel job executes is in unknown state,
if the \fIreschedule_unknown\fP parameter is activated.
.PP
.IP "\fIMAX_DYN_EC\fP"
Sets the max number of dynamic event clients (as used by
.B qsub \-sync y
and by xxQS_NAMExx DRMAA API library sessions). The default is 1000.
The number of dynamic event clients should not be bigger than half of
the number of file descriptors the system has. The number of file
descriptors are shared among the connections to all exec hosts, all
event clients, and file handles that the qmaster needs.
.PP
.IP "\fIMONITOR_TIME\fP"
Specifies the time interval when the monitoring information should be printed. The
monitoring is disabled by default and can be enabled by specifying an interval.
The monitoring is per-thread and is written to the messages file or displayed by
.M qping 1
with option
.BR \-f .
Example: MONITOR_TIME=0:0:10 generates and
prints the monitoring information approximately every 10 seconds. The specified
time is a guideline only and not a fixed interval. The interval that is actually
used is printed. In this example, the interval could be anything between 9
seconds and 20 seconds.
.PP
.IP "\fILOG_MONITOR_MESSAGE\fP"
Monitoring information is logged into the messages files by default. This
information can be accessed via by
.M qping 1 .
If monitoring is always enabled, the messages files can become quite large.
This switch disables logging into the messages files, making
.I qping \-f
the only source of monitoring data.
.PP
Profiling provides the user with the possibility to get system measurements.
This can be useful for debugging or optimization of the system. The profiling
output will be done within the messages file.
.IP "\fIPROF_SIGNAL\fP"
Enables profiling for the qmaster signal thread
(e.g. PROF_SIGNAL=true).
.PP
.IP "\fIPROF_WORKER\fP"
Enables profiling for the qmaster worker threads
(e.g. PROF_WORKER=true).
.PP
.IP "\fIPROF_LISTENER\fP"
Enables profiling for the qmaster listener threads
(e.g. PROF_LISTENER=true).
.PP
.IP "\fIPROF_DELIVER\fP"
Enables profiling for the qmaster event deliver thread
(e.g. PROF_DELIVER=true).
.PP
.IP "\fIPROF_TEVENT\fP"
Enables the profiling for the qmaster timed event thread
(e.g. PROF_TEVENT=true).
.IP \fIPROF_SCHEDULER\fP
Enables profiling for the qmaster scheduler thread
(e.g. PROF_SCHEDULER=true).
.PP
Please note that the CPU utime and stime values contained in the profiling output
are not per-thread CPU times.
These CPU usage statistics are per-process statistics.
So the printed profiling values for CPU mean "CPU time consumed by sge_qmaster (all threads) while the reported profiling level was active".
.IP "\fISTREE_SPOOL_INTERVAL\fP"
Sets the time interval for spooling the sharetree usage. The
default is set to 00:04:00. The setting accepts colon-separated
string or seconds. There is no setting to turn the sharetree spooling
off.
(e.g. STREE_SPOOL_INTERVAL=00:02:00)
.PP
.IP "\fIMAX_JOB_DELETION_TIME\fP"
Sets the value of how long the qmaster will spend deleting jobs. After this time,
the qmaster will continue with other tasks and schedule the deletion of remaining
jobs at a later time. The default value is 3 seconds, and will be used if no value
is entered. The range of valid values is > 0 and <= 5.
(e.g. MAX_JOB_DELETION_TIME=1)
.PP
.IP "\fIgdi_timeout\fP"
Sets how long the communication will wait for GDI send/receive operations.
(GDI is the Grid Engine Database Interface for interacting with
objects managed by the qmaster.)
The default value is set to 60 seconds. After this time, the communication library will
retry, if "gdi_retries" is configured, receiving the GDI request. If not configured the communication will return with a "gdi receive failure"
(e.g. gdi_timeout=120 will set the timeout time to 120 sec).
Configuring no gdi_timeout value, the value defaults to 60 sec.
.PP
.IP "\fIgdi_retries\fP"
Sets how often the GDI receive call will be repeated until the GDI receive
error appears. The default is set to 0. In this case the call will be done 1 time with no retry.
Setting the value to -1 the call will be done permanently. In
combination with the gdi_timeout parameter
it is possible to configure a system with, e.g. slow NFS, to make sure that all jobs will be submitted.
(E.g. gdi_retries=4.)
.PP
.IP "\fIcl_ping\fP"
Turns on/off a communication library ping. This parameter will create additional debug output.
This output shows information about the error messages which are returned by communication
and it will give information about the application status of the qmaster.
For example, if it's unclear what's the
reason for gdi timeouts, this may show you some useful messages. The default value is false (off)
(i.e. cl_ping=false).
.PP
.IP "\fISCHEDULER_TIMEOUT\fP"
Setting this parameter allows the scheduler GDI event acknowledge timeout to be manually configured to a
specific value. Currently the default value is 10 minutes with the default scheduler configuration and limited
between 600 and 1200 seconds.
.\" Fixme: what does this mean?
Value is limited only in case of default value.
The default value depends
on the current scheduler configuration. The \fISCHEDULER_TIMEOUT\fP value is specified in seconds.
.PP
.IP "\fIjsv_timeout\fP"
This parameter measures the response time of the server JSV. In the event that the response time of the JSV
is longer than the timeout value specified, this will cause the JSV to be re-started. The default value for the
timeout is 10 seconds and if modified, must be greater than 0. If the timeout is reached, the JSV will only
try to re-start once; if the timeout is reached again, an error will occur.
.PP
.IP "\fIjsv_threshold\fP"
The threshold of a JSV is measured as the time it takes to perform a server job verification. If this value is
greater than the user-defined value, it will cause logging to appear in the qmaster messages file at the INFO
level. By setting this value to 0, all jobs will be logged in the qmaster messages file. This value is specified
in milliseconds and has a default value of 5000.
.IP "\fIOLD_RESCHEDULE_BEHAVIOR\fP"
Beginning with version 8.0.0 of xxQS_NAMExx the scheduling behavior changed
for jobs that are rescheduled by users. Rescheduled jobs will not be put at the
beginning of the pending job list anymore. The submit time of those jobs is set
to the end time of the previous run. Due to that, those rescheduled jobs will be
appended to the pending job list as if a new job had been
submitted. To achieve the old behaviour, set the parameter \fIOLD_RESCHEDULE_BEHAVIOR\fP. Please note that this parameter is deprecated,
so it might be removed with the next minor release.
.IP "\fIOLD_RESCHEDULE_BEHAVIOR_ARRAY_JOB\fP"
Beginning with version 8.0.0 of xxQS_NAMExx the scheduling behavior changed
for array job tasks that are rescheduled by users. As soon as an array job task
gets rescheduled, all remaining pending tasks of that job will be put at the end of
the pending job list. To achieve the old scheduling behaviour set the parameter
\fIOLD_RESCHEDULE_BEHAVIOR_ARRAY_JOB\fP. Please note that this
parameter is deprecated, so it might be removed with the next minor release.
.IP \fISIMULATE_EXECDS\fP
Bypass execd communication in qmaster for (e.g. for throughput tests
with fake hosts). "Unknown" queue states are suppressed, but
.B load_thresholds=none
must be used to avoid queues going into an alarm state since load values
are not simulated. Submitted
jobs are dispatched, and act as if they are run for a time determined
by the job's first argument, after 3s spent in the "transferring"
state. I.e. there is a simulated 10s runtime for a command such as
.nf
qsub \-b y sleep 10
.fi
In this condition, job deletion works, but at least interactive jobs,
tightly-integrated parallel ones, and job suspension don't. The
execution hosts configured need not exist, but must have resolvable
network names.
.IP \fINO_AUTHENTICATION\fP
Don't do authentication when GSSAPI security is enabled. This, and
the following parameter, determine the GSS global configuration, which
can be overridden with the execd_params of the global or host-specific
configuration.
.IP \fINO_SECURITY\fP
Don't store and forward credentials if GSSAPI security is enabled.
.IP \fIENABLE_MTRACE\fP
If GNU malloc is in use (rather then jemalloc, which is usually used
on GNU/Linux) enable the facility for recording all
memory allocation/deallocation. Requires
.I MALLOC_TRACE
to be set in the environment (see
.M mtrace 3 ).
.IP \fI__TEST_SLEEP_AFTER_REQUEST\fP
Used by the test suite to block the worker thread for five seconds
after handling a request to ensure another worker thread will handle a
subsequent request.
.IP \fIprint_malloc_info\fB
Allow monitoring
.M malloc 3
statistics if xxQS_NAMExx is built to use the
.M jemalloc (3)
allocator.
The information is usually obtained with the
.B \-info
option of
.M qping 1 ,
but is generated by the daemons and can't be controlled by the client.
The default is false since the output is verbose and might confuse
programs parsing the traditional format. The parameter can also be
set in
.B execd_params
and affects both qmaster and execd daemons.
.PP
Changing \fBqmaster_params\fP will take immediate effect, except that
gdi_timeout, gdi_retries, and cl_ping
will take effect only for new connections.
The default for \fBqmaster_params\fP is none.
.PP
This value is a global configuration parameter only. It cannot be
overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBexecd_params\fP"
This is used for passing additional parameters
to the xxQS_NAMExx execution daemon. The following values are recognized:
.\"
.IP "\fIACCT_RESERVED_USAGE\fP"
If this parameter is set to true, the usage of "reserved" (allocated)
resources is reported in the accounting entries \fBcpu\fP, \fBmem\fP,
and \fBmaxvmem\fP instead of the measured usage. The live usage values
reported by
.M qstat 1
are affected similarly. This means that the
"wall clock" time (end\-start) is reported instead of CPU time, memory
usage is memory allocation times wall clock time (which is only computable if
the job requests h_vmem or s_vmem), and maxvmem is the requested
h_vmem or s_vmem; the same scaling by slots is done as without this option.
.br
Note that both the wall clock and CPU times are normally available (see
.M accounting 5 ),
so this option loses information, and "reserved" here has nothing to
do with advance/resource reservation. See also
.I SHARETREE_RESERVED_USAGE
below.
.PP
.IP "\fIENABLE_WINDOMACC\fP"
If this parameter is set to true, Windows Domain accounts (WinDomAcc)
are used on Windows hosts. These accounts require the use of
.M sgepasswd 1 .
(See also
.M sgepasswd 5 .)
If this parameter is set to false, or is not set, local Windows accounts are used.
On non-Windows hosts, this parameter is ignored.
.PP
.IP "\fIIGNORE_NGROUPS_MAX_LIMIT\fP"
.\" fixme: -1 looks wrong
If a user is assigned to NGROUPS_MAX\-1 supplementary groups,
so that xxQS_NAMExx is not able to add one for job tracking,
then the job will go into an error state when it is started.
(NGROUPS_MAX is the system limit on supplementary groups; see
.M limits.h 7 .)
Administrators that want to prevent the system doing so can set this parameter.
In this case the NGROUPS_MAX limit is ignored and the additional group (see
\fIgid_range\fP) is not set. As a result for those jobs no online usage will be
available. Also the parameter \fIENABLE_ADDGRP_KILL\fP will have no effect.
Please note that it is not recommended to use this parameter. Instead the group
membership of the submit user should be reduced.
.PP
.IP "\fIKEEP_ACTIVE\fP"
This value should only be set for debugging purposes. If set to true, the
execution daemon will not remove the spool directory maintained by
.M xxqs_name_sxx_shepherd 8
for a job, or cgroup directories if cgroups are in use under Linux.
.PP
.IP "\fIPTF_MIN_PRIORITY\fP, \fIPTF_MAX_PRIORITY\fP"
The maximum/minimum priority which xxQS_NAMExx will assign to a job.
Typically this is a negative/positive value in the range of \-20
(maximum) to 19 (minimum) for systems which allow setting of priorities
with the
.MO nice 2
system call. Other systems may provide different ranges.
.br
The default priority range (which varies from system to system) is installed
either by removing the parameters, or by setting a value of \-999.
.br
See the "messages" file of the execution daemon for the predefined
default value on your hosts. The values are logged during the startup of
the execution daemon.
.PP
.IP "\fIPROF_EXECD\fP"
Enables the profiling for the execution daemon
(e.g. PROF_EXECD=true).
.PP
.IP "\fINOTIFY_KILL\fP"
This parameter allows you to change the notification signal for
the signal SIGKILL (see the \fI\-notify\fP option of
.M qsub 1 ).
The parameter either accepts signal names (use the \fI\-l\fP option of
.MO kill 1 )
or the special value \fInone\fP. If set to \fInone\fP,
no notification signal will be sent. If it is set to \fITERM\fP, for
instance, or another
signal name, then this signal will be sent as the notification signal.
.PP
.IP "\fINOTIFY_SUSP\fP"
With this parameter it is possible to modify the notification signal
for the signal SIGSTOP (see the \fI\-notify\fP parameter of
.M qsub 1 ).
The parameter either accepts signal names (use the \fI\-l\fP option of
.MO kill 1 )
or the special value \fInone\fP. If set to \fInone\fP,
no notification signal will be sent. If it is set to \fITSTP\fP, for
instance, or another
signal name, then this signal will be sent as notification signal.
.PP
.IP "\fISHARETREE_RESERVED_USAGE\fP"
If this parameter is set to true, the usage of "reserved" resources is
taken for the xxQS_NAMExx share tree consumption instead of measured
usage. See the description of
.I ACCT_RESERVED_USAGE
above for details.
.br
.B Note:
When running tightly integrated jobs with \fISHARETREE_RESERVED_USAGE\fP set,
and with \fIaccounting_summary\fP enabled in the parallel environment,
reserved usage will only be reported by the master task of the parallel job.
No per-parallel task usage records will be sent from execd to qmaster, which
can significantly reduce load on qmaster when running large tightly integrated parallel jobs.
.PP
.IP "\fIUSE_QSUB_GID\fP"
If this parameter is set to true, the primary group id active when a
job was submitted will be set to become the primary group id for job
execution. If the parameter is not set, the primary group id as defined for
the job owner in the execution host passwd database is used.
.br
The feature is only available for jobs submitted via
.M qsub 1 ,
.M qrsh 1 ,
.M qmake 1
and
.M qtcsh 1 .
Also, it only works for
.M qrsh 1
jobs (and thus also for
.M qtcsh 1
and
.M qmake 1 )
if builtin communication is used, or the rsh and rshd components which
are provided with xxQS_NAMExx (see
.M remote_startup 5 ).
.PP
.IP "\fIS_DESCRIPTORS\fP, \fIH_DESCRIPTORS\fP, \fIS_MAXPROC\fP, \fIH_MAXPROC\fP, \fIS_MEMORYLOCKED\fP, \fIH_MEMORYLOCKED\fP, \fIS_LOCKS\fP, \fIH_LOCKS\fP"
Specifies soft and hard resource limits as implemented by the
.MO setrlimit 2
system call. See that manual page on your system for more information. These
parameters complete the list of limits set by the RESOURCE LIMITS parameter
of the queue configuration as described in
.M queue_conf 5 .
Unlike the resource limits in the queue
configuration, these resource limits are set for every job on this execution
host. If a value is not specified, the resource limit is inherited from the
execution daemon process. Because this would lead to unpredictable results
if only one limit of a resource is set (soft or hard), the
corresponding other limit is set to the same value.
.br
\fIS_DESCRIPTORS\fP and \fIH_DESCRIPTORS\fP specify a value one greater than the maximum
file descriptor number that can be opened by any process of a job.
.br
\fIS_MAXPROC\fP and \fIH_MAXPROC\fP specify the maximum number of processes that can be
created by the job user on this execution host.
.br
\fIS_MEMORYLOCKED\fP and \fIH_MEMORYLOCKED\fP specify the maximum number of bytes of
virtual memory that may be locked into RAM.
This typically needs to be set to "unlimited" for use with openib
Infiniband, and possibly similar transports.
.br
\fIS_LOCKS\fP and \fIH_LOCKS\fP specify the maximum number of file locks any process
of a job may establish.
.br
All of these values can be specified using the multiplier letters k, K, m, M, g and G; see
.M xxqs_name_sxx_types 1
for details. Limits can be specified as "infinity" to remove limits
(if possible), per
.MO setrlimit 2 .
.\"
.\"
.IP "\fIINHERIT_ENV\fP"
This parameter indicates whether the shepherd should allow the environment
inherited by the execution daemon from the shell that started it to be inherited
by the job it's starting. When true, any environment variable that is set in
the shell which starts the execution daemon at the time the execution daemon is
started will be set in the environment of any jobs run by that execution daemon,
unless the environment variable is explicitly overridden, such as PATH or
LOGNAME. If set to false, each job starts with only the environment variables
that are explicitly passed on by the execution daemon, such as PATH and LOGNAME.
The default value is true.
.PP
.IP "\fISET_LIB_PATH\fP"
This parameter tells the execution daemon whether to add the xxQS_NAMExx shared
library directory to the library path of executed jobs. If set to true, and
INHERIT_ENV is also set to true, the xxQS_NAMExx shared library directory will
be prepended to the library path which is inherited from the shell which started
the execution daemon. If INHERIT_ENV is set to false, the library path will
contain only the xxQS_NAMExx shared library directory. If set to false, and
INHERIT_ENV is set to true, the library path exported to the job will be the one
inherited from the shell which started the execution daemon. If INHERIT_ENV is
also set to false, the library path will be empty. After the execution daemon
has set the library path, it may be further altered by the shell in which the
job is executed, or by the job script itself. The default value for
SET_LIB_PATH is false.
.PP
.IP "\fIENABLE_ADDGRP_KILL\fP"
If this parameter is set then xxQS_NAMExx uses the supplementary group ids
(see \fIgid_range\fP) to identify all processes which are to be terminated
when a job is deleted, or when
.M xxqs_name_sxx_shepherd 8
cleans up after job termination.
This currently only works under GNU/Linux, Solaris, Tru64, FreeBSD,
and Darwin.
The default value is on.
Irrelevant with cpuset support (see USE_CGROUPS below).
.PP
.IP "\fIPDC_INTERVAL\fP"
This parameter defines the interval (default 1s) between runs of the PDC (Portable
Data Collector) by the execution daemon. The PDC is responsible for enforcing
the resource limits s_cpu, h_cpu, s_vmem and h_vmem (see
.M queue_conf 5 )
and job usage collection.
The parameter can be set
to a time_specifier (see
.M xxqs_name_sxx_types 5 ),
to \fBPER_LOAD_REPORT\fP or to \fBNEVER\fP.
.br
If this parameter is set to \fBPER_LOAD_REPORT\fP the PDC is triggered in the
same interval as \fBload_report_time\fP (see above). If this parameter is set
to \fBNEVER\fP the PDC run is never triggered. The default is 1 second.
.br
\fBNote:\fP A PDC run is quite compute intensive, and may degrade the
performance of the running jobs. However, if the PDC runs less often, or never, the
online usage can be incomplete or totally missing (for example online usage of very short
running jobs might be missing) and the resource limit enforcement is
less accurate or would not happen if PDC is turned off completely.
.PP
.IP "\fIENABLE_BINDING\fP"
If this parameter is set, then xxQS_NAMExx enables the core binding module
within the execution daemon to apply binding parameters that are specified
at submission time of a job. This parameter is set by default if
xxQS_NAMExx was compiled with support for core binding.
Find more information for job to core binding in the section \fI\-binding\fP of
.M qsub 1 .
.IP \fISIMULATE_JOBS\fP
Allow the simulation of jobs. (Job spooling and execution on the
execd side is disabled.)
.IP \fINO_AUTHENTICATION\fP
Turn off authentication for the relevant host(s) when the
authentication GSSAPI security feature is enabled globally.
.IP \fIDO_AUTHENTICATION\fP
Turn on authentication for the relevant host(s) when the
authentication GSSAPI security feature is enabled globally.
.IP \fINO_SECURITY\fP
Turn off storing and forwarding of credentials when the GSSAPI
security feature is enabled globally.
.IP \fIUSE_SYSLOG\fP
Write messages to the system logger (see
.MO syslog 3 )
rather than into the spool directory.
.IP \fIUSE_QIDLE\fP
Automatically start any executable named
.I qidle
present in the architecture-dependent binary directory as a load
sensor, similarly to
.I qloadsensor
(which is run unconditionally). It is intended to determine whether a
workstation is "idle" or not, i.e. whether it has an interactive load.
See e.g. the
.URL http://arc.liv.ac.uk/SGE/howto/idle.html "idle time HOWTO"
or
.I sources/experimental/qidle
in the source repository, but it may be better to check the
the screensaver state.
.IP \fIUSE_CGROUPS\fP
[Linux only.] Use cgroups/cpusets for resource management if the
system supports them and the necessary directories exist in the
relevant filesystems (possibly created by
.IR util/resources/scripts/setup-cgroups-etc ).
Makes ENABLE_ADDGRP_KILL irrelevant.
This option is experimental, and at least the default is likely to
change in future. Default is no.
.IP \fIUSE_SMAPS\fP
[Linux only.] Read processes'
.I smaps
file in the
.MO proc 5
filesystem to obtain PSS usage for most accurate memory accounting, or
to obtain the swap usage on older systems which don't report PSS.
That can be slow when processes have very many maps (observed with an
FEM code), significantly increasing the load from execd, so the
default is no. Without
.IR smaps ,
usage is reported as RSS+swap, instead of PSS+swap, or simply as the
VMsize if the swap value isn't available.
.PP
.IP \fIprint_malloc_info\fP
See
.B qmaster_params
above.
.IP \fBDEMAND_LS\fP
If true, generate load sensor reports just before sending them, making
the data fresher. The default is true. The switch is provided in
case slow sensors are found to have a bad effect on the execd.
.PP
Changing \fBexecd_params\fP will take effect after it is propagated to the
execution daemons. The propagation is done in one load report interval.
The default for \fBexecd_params\fP is none.
.PP
The global configuration entry for this value
may be overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBreporting_params\fP"
Used to define the behavior of reporting modules in the xxQS_NAMExx
qmaster. Changes to the \fBreporting_params\fP take immediate effect.
The following values are recognized:
.\"
.IP "\fIaccounting\fP"
If this parameter is set to true, the accounting file is written.
The accounting file is a prerequisite for
.M qacct 1 .
.PP
.IP "\fIreporting\fP"
If this parameter is set to true, the reporting file is written.
The reporting file contains data that can be used for monitoring and analysis,
like job accounting, job log, host load and consumables, queue status and
consumables, and sharetree configuration and usage.
Attention: Depending on the size and load of the cluster, the reporting file can
become quite large. Only activate the reporting file if you have a process running that will consume the reporting file!
See
.M reporting 5
for further information about the format and contents of the reporting file.
.PP
.IP "\fIflush_time\fP"
The contents of the reporting file are buffered in the
xxQS_NAMExx qmaster and flushed at a fixed interval.
This interval can be configured with the \fIflush_time\fP parameter.
It is specified as a time value in the format HH:MM:SS or a number of seconds.
Sensible values range from a few seconds to a minute. Setting it too low may
slow down the qmaster. Setting it too high will make the qmaster consume large
amounts of memory for buffering data.
The reporting file is opened and closed for each flush. Default 15s.
.PP
.IP "\fIaccounting_flush_time\fP"
The contents of the accounting file are buffered in the
xxQS_NAMExx qmaster and flushed at a fixed interval.
This interval can be configured with the \fIaccounting_flush_time\fP parameter.
It is specified as a time value in the format HH:MM:SS.
Sensible values range from a few seconds to one minute. Setting it too low may
slow down the qmaster. Setting it too high will make the qmaster consume large
amounts of memory for buffering data. Setting it to 0 disables
buffering; as soon as a record is generated, it will be written to
the accounting file. If this parameter is not set, the accounting data flush
interval will default to the value of the \fIflush_time\fP parameter.
The accounting file is opened and closed for each flush.
.PP
.IP "\fIjoblog\fP"
If this parameter is set to true, the reporting file will contain job logging
information. See
.M reporting 5
for more information about job logging.
.PP
.IP "\fIsharelog\fP"
The xxQS_NAMExx qmaster can dump information about sharetree configuration and use to the reporting file.
The parameter \fIsharelog\fP sets an interval in which sharetree information will be dumped.
It is set in the format HH:MM:SS or a number of seconds. A value of 0
(default) configures qmaster not to
dump sharetree information. Intervals of several minutes up to hours are sensible values for this parameter.
See
.M reporting 5
for further information about sharelog.
.PP
.IP "\fIlog_consumables\fP"
This parameter controls writing of consumable resources to the reporting file.
When set to \fBlog_consumables=true\fP
information about all consumable resources (their current usage and their capacity)
will be written
to the reporting file, whenever a consumable resource changes either in definition,
or in capacity,
or when the usage of an arbitrary consumable resource changes.
When \fBlog_consumables\fP is set to \fBfalse\fP (default), only those variables will be written to the
reporting file that are configured in the \fBreport_variables\fP in the exec host configuration
and whose definition or value actually changed.
This parameter is deprecated and will get removed in the next major release.
See
.M host_conf 5
for further information about \fBreport_variables\fP.
.PP
.\"
.\"
.SS "\fBfinished_jobs\fP"
.B Note:
Deprecated, may be removed in a future release.
.br
xxQS_NAMExx stores a certain number of \fIjust finished\fP jobs to provide
post mortem status information via
.IR "qstat \-s z" .
The \fBfinished_jobs\fP parameter defines the
number of finished ("zombie") jobs stored. If this maximum number is reached, the
eldest finished job will be discarded for every new job added to the
finished job list. (The zombie list is not spooled, and so will be
lost by a qmaster re-start.)
.PP
Changing \fBfinished_jobs\fP will take immediate effect.
The default for \fBfinished_jobs\fP is 100.
.PP
This value is a global configuration parameter only. It cannot be
overwritten by the execution host local configuration.
.\"
.\"
.SS "\fBqlogin_daemon\fP"
.SS "\fBqlogin_command\fP"
.SS "\fBrlogin_daemon\fP"
.SS "\fBrlogin_command\fP"
.SS "\fBrsh_daemon\fP"
.SS "\fBrsh_command\fP"
These three pairs of entries are responsible for defining a remote startup method for either
interactive jobs by
.M qlogin 1
or
.M qrsh 1
\fBwithout\fR a command,
or an interactive
.M qrsh 1
request
\fBwith\fR a command. The last startup method is also used to startup tasks on a slave exechost of
a tightly integrated parallel job.
Each pair for one startup method must contain matching communication methods. All
entries can contain the value \fBbuiltin\fR (which is the default) or a full path to
a binary which should be used, and additional arguments to this command if necessary.
.sp 1
The entries for the three \fB..._command\fR definitions can, in
addition, contain the value \fBNONE\fP
in case a particular startup method should be disabled.
.sp 1
Changing any of these entries will take immediate effect.
.sp 1
The global configuration entries for these values may be overwritten by a
execution host local configuration.
.sp 1
See
.M remote_startup 5
for a detailed explanation of these settings.
.\"
.\"
.SS "\fBdelegated_file_staging\fP"
This flag must be set to "true" when the prolog and epilog are ready for
delegated file staging, so that the DRMAA attribute 'drmaa_transfer_files'
is supported. To establish delegated file staging, use the variables
beginning with "$fs_..." in prolog and epilog to move the input, output
and error files from one host to the other.
When this flag is set to "false", no file staging is available
for the DRMAA interface. File staging is currently implemented only via
the DRMAA interface.
When an error occurs while moving the input, output and error files, return
error code 100 so that the error handling mechanism can handle the error
correctly. (See also FORBID_APPERROR.)
.\"
.\"
.SS "\fBreprioritize\fP"
.B Note:
Deprecated, may be removed in future release.
.br
This flag enables or disables the reprioritization of jobs based on their
ticket amount. The \fBreprioritize_interval\fP in
.M sched_conf 5
takes effect only if \fBreprioritize\fP is set to true. To turn off
job reprioritization, the \fBreprioritize\fP flag must be set to false
and the \fBreprioritize_interval\fP to 0, which is the default.
.sp 1
This value is a global configuration parameter only. It cannot be
overridden by the execution host local configuration.
.\"
.\"
.SS "\fBjsv_url\fP"
This setting defines a server JSV instance which will be started and
triggered by the
.M xxqs_name_sxx_qmaster 8
process. This JSV instance will be used to verify job specifications of
jobs before they are accepted and stored in the internal master database.
The global configuration entry for this value cannot be overwritten by
execution host local configurations.
.sp 1
Find more details concerning JSV in
.M jsv 1
and
.M xxqs_name_sxx_request 1 .
.sp 1
The syntax of the \fBjsv_url\fP is specified in
.M xxqs_name_sxx_types 1 .
.\"
.\"
.SS "\fBjsv_allowed_mod\fP"
If there is a server JSV script defined with the \fBjsv_url\fP parameter, then
all
.M qalter 1
or
.M qmon 1
modification requests for jobs are rejected by qmaster. With the \fBjsv_allowed_mod\fP
parameter an administrator has the possibility to allow a set of switches which can then
be used with clients to modify certain job attributes. The value for this parameter has to be a
comma-separated list of JSV job parameter names as documented in
.M qsub 1 ,
or the value \fBnone\fP to indicate that no modification should be allowed.
Please note that even if \fBnone\fP is specified, the switches \fB\-w\fP and \fB\-t\fP are
allowed for qalter.
.\"
.\"
.SS "\fBlibjvm_path\fP"
\fBlibjvm_path\fP is usually set during qmaster installation and points to the absolute path of libjvm.so
(or the corresponding library depending on your architecture \- e.g. /usr/java/jre/lib/i386/server/libjvm.so). The referenced libjvm version must be at least 1.5.
It is needed by the JVM qmaster thread only. If the Java VM needs additional starting parameters they can be set in \fBadditional_jvm_args\fP. Whether the JVM thread is started at all can be defined in the
.M bootstrap 5
file. If libjvm_path is empty, or an incorrect path, the JVM thread fails to start.
.sp 1
.\" fixme: does this make sense, unless it means for failover qmasters?
The global configuration entry for this value may be overwritten by the
execution host local configuration.
.\"
.\"
.SS "\fBadditional_jvm_args\fP"
\fBadditional_jvm_args\fP is usually set during qmaster installation.
Details about possible values \fBadditional_jvm_args\fP can be found in the help output of the accompanying Java command. This setting is normally not needed.
.sp 1
The global configuration entry for this value may be overwritten by the
execution host local configuration.
.\"
.SH SECURITY
If
.B prolog
or
.B epilog
is specified with a
.IB user @
prefix, security considerations apply. The methods are run in a
user-supplied environment (via
.B \-V
or
.BR \-v )
which provides a mechanism to run arbitrary code as
.I user
(which might well be root) by setting variables such as
.B LD_LIBRARY_PATH
and
.B LD_PRELOAD
to affect the running of the dynamically linked programs, such as
shells, which are used to implement the methods.
.PP
To combat this, known problematic variables are removed from the
environment before starting the methods other than as the job owner,
but this may not be foolproof on arbitrary systems with obscure
variables. The environment can be safely controlled by running the
methods under a statically-linked version of
.MO env 1 ,
such as typically available using
.MO busybox 1 ,
for example. Use
.IP
.BR "/bin/busybox env \-u " ...
.PP
to unset sensitive variables, or
.IP
.BR "/bin/busybox env \-i name=value" ...
.PP
to set only specific variables. On some systems, such as recent
Solaris, it is essentially impossible to build static binaries. In
that case it is typically possible to use a setuid wrapper, relying on
the dynamic linker to do the right thing. An example is the
.I safe_exec
wrapper which is available from
.URL http://arc.liv.ac.uk/downloads/SGE/support/
at the time of writing. When using a non-shell scripting language
wrapper for the method daemon, try to use options which avoid
interpreter-specific environmental damage, such as Perl's
.B \-T
and Python's
.BR \-E .
Privileged shell script wrappers should be avoided if possible, and
should be written carefully if they are used \- e.g. invoke programs
with full file names \- but if
.M bash 1
is used, it should be run with the
.B \-p
option.
.PP
It is not currently possible to specify the variables unset, e.g. as a
host-dependent execd parameter, but certain system-dependent ones are
selected. The list of sensitive variables is taken mostly from GNU
libc and
.M sudo 1 .
It includes known system-dependent dynamic linker ones, sensitive
locale ones and others, like TMPDIR, but does not attempt to deal
interpreter-specific variables such as PYTHONPATH. The locale
specification is also sanitized. See the source file
.I source/libs/uti2/sge_execvlp.c
for details. Note that TMPDIR is one of the variables affected, and
may need to be recreated (as
.BR /tmp/$JOB_ID.$TASK_ID.$QUEUE ).
.\"
.SH "SEE ALSO"
.M xxqs_name_sxx_intro 1 ,
.MO csh 1 ,
.M qconf 1 ,
.M qsub 1 ,
.M jsv 1 ,
.MO rsh 1 ,
.MO sh 1 ,
.MO getpwnam 3 ,
.M drmaa_attributes 3 ,
.M queue_conf 5 ,
.M sched_conf 5 ,
.M xxqs_name_sxx_types 1 ,
.M xxqs_name_sxx_execd 8 ,
.M xxqs_name_sxx_qmaster 8 ,
.M xxqs_name_sxx_shepherd 8 ,
.MO cron 8 ,
.M remote_startup 5
.\" .M remote_startup 5 ,
.\" .I xxQS_NAMExx Installation and Administration Guide.
.\"
.SH "COPYRIGHT"
See
.M xxqs_name_sxx_intro 1
for a full statement of rights and permissions.
|