File: multiple_amplicon_database.fa

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>seq1 nof_amplicons=2 has a RNA-specific residue (U) and an ambiguous base (R)
AAACTUAAAGGAATTGACGGaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
GTACACACCGCCCGTccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
AAACTTAAAGGAATTGRCGGtttttttttttttttttttttttttttttttttttttttttttttttttttttttttttt
GTACACACCGCCCGT
>seq2 nof_amplicons=6
AAACTUAAAGGAATTGACGGaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
GTACACACCGCCCGTccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
AAACTTAAAGGAATTGRCGGtttttttttttttttttttttttttttttttttttttttttttttttttttttttttttt
GTACACACCGCCCGTgggggAAACTUAAAGGAATTGACGGaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaaaaaaaGTACACACCGCCCGTcccccccccccccccccccccccccccccccccccccccccccccc
cccccccccccccccccccAAACTTAAAGGAATTGRCGGttttttttttttttttttttttttttttttttttttttttt
tttttttttttttttttttGTACACACCGCCCGTgggggAAACTUAAAGGAATTGACGGaaaaaaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaGTACACACCGCCCGTccccccccccccccccccccccccccc
ccccccccccccccccccccccccccccccccccccccAAACTTAAAGGAATTGRCGGtttttttttttttttttttttt
ttttttttttttttttttttttttttttttttttttttGTACACACCGCCCGT
>seq3 nof_amplicons=1
AAACTUAAAGGAATTGACGGaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
GTACACACCGCCCGTccccccccccccccccccccccccccccccccccccccccccccccccccc
>seq4 nof_amplicons=2 one on each strand
AAACTTAAAGGAATTGACGGaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaa
GTACACACCGCCCGTccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
ACGGGCGGTGTGTACtttttttttttttttttttttttttttttcccccccctttttttttttttttttttttttCCGTC
AATTCCTTTAAGTTTccccccc