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#!/bin/csh -f
if ( $#argv < 2 ) then
echo "Error: provide the binary directory as first argument,"
echo "and the location of programs.txt as the second."
echo "A html subdirectory will be created in the current dir."
exit
endif
set GMXBINDIR = $1
set PROGFILE = $2
set dir = $cwd
set VER = 4.5
set MANDIR = online
set HTML = $cwd/html
set HTMLOL = $HTML/$MANDIR
set HTMLIDX = $HTML/$MANDIR.html
set GENERAL = "getting_started:Getting_Started flow:Flow_Chart files:File_Formats mdp_opt:mdp_options"
cd $GMXBINDIR
set PROGRAMS = [a-z]*
cd $dir
echo ""
echo "Generating table of contents in $HTMLIDX"
echo "-------------------------------------------"
if ( ! -d $HTML ) mkdir $HTML
if ( ! -d $HTMLOL ) mkdir $HTMLOL
if ( -f $HTMLIDX ) \rm $HTMLIDX
touch $HTMLIDX
cat > $HTMLIDX << EOD
<HTML>
<HEAD>
<TITLE>GROMACS $VER Online Reference </TITLE>
</HEAD>
<LINK rel=stylesheet href="online/style.css" type="text/css">
<BODY text="#000000" bgcolor="#FFFFFF" link="#0000FF" vlink="#990000" alink="#FF0000">
<table WIDTH="98%" NOSAVE NOBORDER >
<TR><TD WIDTH=400>
<TABLE WIDTH=400 NOBORDER>
<TD WIDTH=116>
<a href="http://www.gromacs.org/">
<img SRC="images/gmxlogo_small.jpg" BORDER=0 height=133 width=116></a></td>
<td ALIGN=LEFT VALIGN=TOP WIDTH=280>
<br><br>
<h2>
GROMACS 4.5<br>
Online Reference</h2>
</td>
</TABLE></TD>
<td ALIGN=RIGHT VALIGN=BOTTOM WIDTH="*" NOSAVE>
<B>VERSION 4.5<br>
Thu 26 Aug 2010</B></td>
</tr>
</table>
<hr>
<TABLE BORDER=0 CELLSPACING=0 CELLPADDING=10>
<TR>
<TD VALIGN=top WIDTH="25%">
<h3>General</h3>
EOD
foreach i ( $GENERAL )
set file = `echo $i | cut -d: -f1`
set desc = `echo $i | cut -d: -f2 | sed 's/_/ /g'`
echo "<A HREF="\""$MANDIR/"$file".html"\"">"$desc"</a>" >> $HTMLIDX
echo "<br><br>" >> $HTMLIDX
end
cat >> $HTMLIDX <<EOD
<A HREF="gmxfaq.html">FAQ</a>
<br>
</TD>
<TD VALIGN=top WIDTH=75%>
<h3>Programs</h3>
<multicol cols=5>
<A HREF="$MANDIR/options.html">Options</a>
<br>
EOD
foreach program ( $PROGRAMS )
if ( ( -x $GMXBINDIR/$program ) && ( $program != "my_dssp" ) && ( $program != "GMXRC" ) && ( $program != "completion.csh" ) && ( $program != "completion.zsh" ) && ( $program != "average" ) && ( $program != "completion.bash" ) && ( $program != "luck" ) ) then
echo "<br><a href="$MANDIR/$program.html">$program</a>" >> $HTMLIDX
endif
end
cat >> $HTMLIDX << EOD
</multicol>
</TD>
</TR>
</TABLE>
<HR>
<h3>Programs by Topic</h3>
<multicol cols=3>
EOD
awk -F '|' -v mandir=$MANDIR '{\
if (NF) {\
if ( $1 == "HEAD" ) {\
hnr++;\
printf("<A HREF=\"#HNR%d\">%s</A><br>\n",hnr,$2);\
}\
}\
}' $PROGFILE >> $HTMLIDX
echo "</multicol> " >> $HTMLIDX
awk -F '|' -v mandir=$MANDIR '{\
if (NF) {\
if ( $1 == "HEAD" ) {\
hnr++;\
printf("\n<A NAME=\"HNR%d\">\n",hnr);\
printf("<TABLE CELLSPACING=1>\n<TR><TD> \n");\
printf("<TR><TD COLSPAN=2><b>%s</b>\n",$2);\
} else if ( $1 == "END" ) {\
printf("</TABLE>\n");\
} else {\
printf("<TR><TD><A HREF=\"%s/%s.html\">%s</A></TD><TD>%s</TD>\n",mandir,$1,$1,$2);\
}\
}\
}' $PROGFILE >> $HTMLIDX
cat >> $HTMLIDX <<EOD
<p>
<hr>
<div ALIGN=RIGHT>
<font size="-1"><a href="http://www.gromacs.org">http://www.gromacs.org</a></font><br>
</body>
</html>
EOD
echo "Generating html manual for GROMACS programs"
echo "-------------------------------------------"
cd $dir
foreach program ( $PROGRAMS )
if ( ( -x $GMXBINDIR/$program ) && ( $program != "my_dssp" ) && ( $program != "GMXRC" ) && ( $program != "completion.csh" ) && ( $program != "completion.zsh" ) && ( $program != "average" ) && ( $program != "completion.bash" ) && ( $program != "luck" ) ) then
echo -n "$program "
cd $HTMLOL
$GMXBINDIR/$program -quiet -man html >& /dev/null
endif
endif
end
#last line
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