File: test.c

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/* multilarge/test.c
 * 
 * Copyright (C) 2015 Patrick Alken
 * 
 * This program is free software; you can redistribute it and/or modify
 * it under the terms of the GNU General Public License as published by
 * the Free Software Foundation; either version 3 of the License, or (at
 * your option) any later version.
 * 
 * This program is distributed in the hope that it will be useful, but
 * WITHOUT ANY WARRANTY; without even the implied warranty of
 * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the GNU
 * General Public License for more details.
 * 
 * You should have received a copy of the GNU General Public License
 * along with this program; if not, write to the Free Software
 * Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
 */

#include <config.h>
#include <stdlib.h>
#include <gsl/gsl_math.h>
#include <gsl/gsl_test.h>
#include <gsl/gsl_multifit.h>
#include <gsl/gsl_multilarge.h>
#include <gsl/gsl_blas.h>
#include <gsl/gsl_rng.h>
#include <gsl/gsl_linalg.h>
#include <gsl/gsl_ieee_utils.h>

static void test_random_matrix_orth(gsl_matrix *m, const gsl_rng *r);
static void test_random_matrix_ill(gsl_matrix *m, const gsl_rng *r);
static void test_random_vector(gsl_vector *v, const gsl_rng *r,
                               const double lower, const double upper);
static void test_random_matrix(gsl_matrix *m, const gsl_rng *r,
                               const double lower, const double upper);
static void test_random_vector_noise(const gsl_rng *r, gsl_vector *y);
static void test_compare_vectors(const double tol, const gsl_vector * a,
                                 const gsl_vector * b, const char * desc);
static void test_multifit_solve(const double lambda, const gsl_matrix * X,
                                const gsl_vector * y, const gsl_vector * wts,
                                const gsl_vector * diagL, const gsl_matrix * L,
                                double *rnorm, double *snorm, gsl_vector * c);
static void test_multilarge_solve(const gsl_multilarge_linear_type * T, const double lambda,
                                  const gsl_matrix * X, const gsl_vector * y, gsl_vector * wts,
                                  const gsl_vector * diagL, const gsl_matrix * L,
                                  double *rnorm, double *snorm, gsl_vector * c);

/* generate random square orthogonal matrix via QR decomposition */
static void
test_random_matrix_orth(gsl_matrix *m, const gsl_rng *r)
{
  const size_t M = m->size1;
  gsl_matrix *A = gsl_matrix_alloc(M, M);
  gsl_vector *tau = gsl_vector_alloc(M);
  gsl_matrix *R = gsl_matrix_alloc(M, M);

  test_random_matrix(A, r, -1.0, 1.0);
  gsl_linalg_QR_decomp(A, tau);
  gsl_linalg_QR_unpack(A, tau, m, R);

  gsl_matrix_free(A);
  gsl_matrix_free(R);
  gsl_vector_free(tau);
}

/* construct ill-conditioned matrix via SVD */
static void
test_random_matrix_ill(gsl_matrix *m, const gsl_rng *r)
{
  const size_t M = m->size1;
  const size_t N = m->size2;
  gsl_matrix *U = gsl_matrix_alloc(M, M);
  gsl_matrix *V = gsl_matrix_alloc(N, N);
  gsl_vector *S = gsl_vector_alloc(N);
  gsl_matrix_view Uv = gsl_matrix_submatrix(U, 0, 0, M, N);
  const double smin = 16.0 * GSL_DBL_EPSILON;
  const double smax = 10.0;
  const double ratio = pow(smin / smax, 1.0 / (N - 1.0));
  double s;
  size_t j;

  test_random_matrix_orth(U, r);
  test_random_matrix_orth(V, r);

  /* compute U * S */

  s = smax;
  for (j = 0; j < N; ++j)
    {
      gsl_vector_view uj = gsl_matrix_column(U, j);

      gsl_vector_scale(&uj.vector, s);
      s *= ratio;
    }

  /* compute m = (U * S) * V' */
  gsl_blas_dgemm(CblasNoTrans, CblasTrans, 1.0, &Uv.matrix, V, 0.0, m);

  gsl_matrix_free(U);
  gsl_matrix_free(V);
  gsl_vector_free(S);
}

static void
test_random_vector(gsl_vector *v, const gsl_rng *r,
                   const double lower, const double upper)
{
  size_t i;
  size_t N = v->size;

  for (i = 0; i < N; ++i)
    {
      gsl_vector_set(v, i,
                     gsl_rng_uniform(r) * (upper - lower) + lower);
    }
}

static void
test_random_matrix(gsl_matrix *m, const gsl_rng *r,
                   const double lower, const double upper)
{
  size_t i, j;
  size_t M = m->size1;
  size_t N = m->size2;

  for (i = 0; i < M; ++i)
    {
      for (j = 0; j < N; ++j)
      {
        gsl_matrix_set(m, i, j,
                       gsl_rng_uniform(r) * (upper - lower) + lower);
      }
    }
}

/* generate Vandermonde matrix using equally spaced input points
 * on [0,1] */
static void
test_vander_matrix(gsl_matrix * m)
{
  const size_t M = m->size1;
  const size_t N = m->size2;
  const double dt = 1.0 / (M - 1.0);
  size_t i, j;

  for (i = 0; i < M; ++i)
    {
      double ti = i * dt;
      double mij = 1.0;

      for (j = 0; j < N; ++j)
        {
          gsl_matrix_set(m, i, j, mij);
          mij *= ti;
        }
    }
}

static void
test_random_vector_noise(const gsl_rng *r, gsl_vector *y)
{
  size_t i;

  for (i = 0; i < y->size; ++i)
    {
      double *ptr = gsl_vector_ptr(y, i);
      *ptr += 1.0e-3 * gsl_rng_uniform(r);
    }
}

static void
test_compare_vectors(const double tol, const gsl_vector * a,
                     const gsl_vector * b, const char * desc)
{
  size_t i;

  for (i = 0; i < a->size; ++i)
    {
      double ai = gsl_vector_get(a, i);
      double bi = gsl_vector_get(b, i);

      gsl_test_rel(bi, ai, tol, "%s i=%zu", desc, i);
    }
}

/* solve least squares system with multifit SVD */
static void
test_multifit_solve(const double lambda, const gsl_matrix * X,
                    const gsl_vector * y, const gsl_vector * wts,
                    const gsl_vector * diagL, const gsl_matrix * L,
                    double *rnorm, double *snorm, gsl_vector * c)
{
  const size_t n = X->size1;
  const size_t p = X->size2;
  gsl_multifit_linear_workspace *w =
    gsl_multifit_linear_alloc(n, p);
  gsl_matrix *Xs = gsl_matrix_alloc(n, p);
  gsl_vector *ys = gsl_vector_alloc(n);
  gsl_vector *cs = gsl_vector_alloc(p);
  gsl_matrix *LQR = NULL;
  gsl_vector *Ltau = NULL;
  gsl_matrix *M = NULL;

  /* convert to standard form */
  if (diagL)
    {
      gsl_multifit_linear_wstdform1(diagL, X, wts, y, Xs, ys, w);
    }
  else if (L)
    {
      const size_t m = L->size1;

      LQR = gsl_matrix_alloc(m, p);
      Ltau = gsl_vector_alloc(GSL_MIN(m, p));
      M = (m >= p) ? gsl_matrix_alloc(m, p) : gsl_matrix_alloc(n, p);

      gsl_matrix_memcpy(LQR, L);
      gsl_multifit_linear_L_decomp(LQR, Ltau);
      gsl_multifit_linear_wstdform2(LQR, Ltau, X, wts, y, Xs, ys, M, w);
    }
  else
    {
      gsl_matrix_memcpy(Xs, X);
      gsl_vector_memcpy(ys, y);
    }

  gsl_multifit_linear_svd(Xs, w);
  gsl_multifit_linear_solve(lambda, Xs, ys, cs, rnorm, snorm, w);

  /* convert to general form */
  if (diagL)
    gsl_multifit_linear_genform1(diagL, cs, c, w);
  else if (L)
    gsl_multifit_linear_wgenform2(LQR, Ltau, X, wts, y, cs, M, c, w);
  else
    gsl_vector_memcpy(c, cs);

  gsl_multifit_linear_free(w);
  gsl_matrix_free(Xs);
  gsl_vector_free(ys);
  gsl_vector_free(cs);

  if (LQR)
    gsl_matrix_free(LQR);
  if (Ltau)
    gsl_vector_free(Ltau);
  if (M)
    gsl_matrix_free(M);
}

/* solve least squares system with multilarge */
static void
test_multilarge_solve(const gsl_multilarge_linear_type * T, const double lambda,
                      const gsl_matrix * X, const gsl_vector * y, gsl_vector * wts,
                      const gsl_vector * diagL, const gsl_matrix * L,
                      double *rnorm, double *snorm, gsl_vector * c)
{
  const size_t n = X->size1;
  const size_t p = X->size2;
  const size_t nblock = 5;
  const size_t nrows = n / nblock; /* number of rows per block */
  gsl_multilarge_linear_workspace *w =
    gsl_multilarge_linear_alloc(T, p);
  gsl_matrix *Xs = gsl_matrix_alloc(nrows, p);
  gsl_vector *ys = gsl_vector_alloc(nrows);
  gsl_vector *cs = gsl_vector_alloc(p);
  gsl_matrix *LQR = NULL;
  gsl_vector *Ltau = NULL;
  size_t rowidx = 0;

  if (L)
    {
      const size_t m = L->size1;

      LQR = gsl_matrix_alloc(m, p);
      Ltau = gsl_vector_alloc(p);

      gsl_matrix_memcpy(LQR, L);
      gsl_multilarge_linear_L_decomp(LQR, Ltau);
    }

  while (rowidx < n)
    {
      size_t nleft = n - rowidx;
      size_t nr = GSL_MIN(nrows, nleft);
      gsl_matrix_const_view Xv = gsl_matrix_const_submatrix(X, rowidx, 0, nr, p);
      gsl_vector_const_view yv = gsl_vector_const_subvector(y, rowidx, nr);
      gsl_vector_view wv;
      gsl_matrix_view Xsv = gsl_matrix_submatrix(Xs, 0, 0, nr, p);
      gsl_vector_view ysv = gsl_vector_subvector(ys, 0, nr);

      if (wts)
        wv = gsl_vector_subvector(wts, rowidx, nr);

      /* convert to standard form */
      if (diagL)
        {
          gsl_multilarge_linear_wstdform1(diagL, &Xv.matrix, wts ? &wv.vector : NULL,
                                          &yv.vector, &Xsv.matrix, &ysv.vector, w);
        }
      else if (L)
        {
          gsl_multilarge_linear_wstdform2(LQR, Ltau, &Xv.matrix, wts ? &wv.vector : NULL,
                                          &yv.vector, &Xsv.matrix, &ysv.vector, w);
        }
      else
        {
          gsl_matrix_memcpy(&Xsv.matrix, &Xv.matrix);
          gsl_vector_memcpy(&ysv.vector, &yv.vector);
        }

      gsl_multilarge_linear_accumulate(&Xsv.matrix, &ysv.vector, w);

      rowidx += nr;
    }

  gsl_multilarge_linear_solve(lambda, cs, rnorm, snorm, w);

  if (diagL)
    gsl_multilarge_linear_genform1(diagL, cs, c, w);
  else if (L)
    gsl_multilarge_linear_genform2(LQR, Ltau, cs, c, w);
  else
    gsl_vector_memcpy(c, cs);

  gsl_multilarge_linear_free(w);
  gsl_matrix_free(Xs);
  gsl_vector_free(ys);
  gsl_vector_free(cs);

  if (LQR)
    gsl_matrix_free(LQR);
  if (Ltau)
    gsl_vector_free(Ltau);
}

static void
test_random(const gsl_multilarge_linear_type * T,
            const size_t n, const size_t p,
            const double tol,
            const gsl_rng * r)
{
  const double tol1 = 1.0e3 * tol;
  gsl_matrix *X = gsl_matrix_alloc(n, p);
  gsl_vector *y = gsl_vector_alloc(n);
  gsl_vector *c = gsl_vector_alloc(p);
  gsl_vector *w = gsl_vector_alloc(n);
  gsl_vector *diagL = gsl_vector_alloc(p);
  gsl_matrix *Lsqr = gsl_matrix_alloc(p, p);
  gsl_matrix *Ltall = gsl_matrix_alloc(5*p, p);
  gsl_vector *c0 = gsl_vector_alloc(p);
  gsl_vector *c1 = gsl_vector_alloc(p);
  double rnorm0, snorm0;
  double rnorm1, snorm1;
  char str[2048];
  size_t i;

  /* generate LS system */
  test_random_matrix_ill(X, r);
  /*test_random_matrix(X, r, -1.0, 1.0);*/
  test_random_vector(c, r, -1.0, 1.0);

  /* compute y = X c + noise */
  gsl_blas_dgemv(CblasNoTrans, 1.0, X, c, 0.0, y);
  test_random_vector_noise(r, y);

  /* random weights */
  test_random_vector(w, r, 0.0, 1.0);

  /* random diag(L) */
  test_random_vector(diagL, r, 1.0, 5.0);

  /* random square L */
  test_random_matrix(Lsqr, r, -5.0, 5.0);

  /* random tall L */
  test_random_matrix(Ltall, r, -10.0, 10.0);

  for (i = 0; i < 2; ++i)
    {
      double lambda = pow(10.0, -(double) i);

      /* unweighted with L = I */
      {
        test_multifit_solve(lambda, X, y, NULL, NULL, NULL, &rnorm0, &snorm0, c0);
        test_multilarge_solve(T, lambda, X, y, NULL, NULL, NULL, &rnorm1, &snorm1, c1);

        sprintf(str, "random %s unweighted stdform n=%zu p=%zu lambda=%g",
                T->name, n, p, lambda);
        test_compare_vectors(tol, c0, c1, str);

        gsl_test_rel(rnorm1, rnorm0, tol1, "rnorm %s", str);
        gsl_test_rel(snorm1, snorm0, tol, "snorm %s", str);
      }

      /* weighted, L = diag(L) */
      {
        test_multifit_solve(lambda, X, y, w, diagL, NULL, &rnorm0, &snorm0, c0);
        test_multilarge_solve(T, lambda, X, y, w, diagL, NULL, &rnorm1, &snorm1, c1);

        sprintf(str, "random %s weighted diag(L) n=%zu p=%zu lambda=%g",
                T->name, n, p, lambda);
        test_compare_vectors(tol, c0, c1, str);

        gsl_test_rel(rnorm1, rnorm0, tol1, "rnorm %s", str);
        gsl_test_rel(snorm1, snorm0, tol, "snorm %s", str);
      }

      /* unweighted, L = diag(L) */
      {
        test_multifit_solve(lambda, X, y, NULL, diagL, NULL, &rnorm0, &snorm0, c0);
        test_multilarge_solve(T, lambda, X, y, NULL, diagL, NULL, &rnorm1, &snorm1, c1);

        sprintf(str, "random %s unweighted diag(L) n=%zu p=%zu lambda=%g",
                T->name, n, p, lambda);
        test_compare_vectors(tol, c0, c1, str);

        gsl_test_rel(rnorm1, rnorm0, tol1, "rnorm %s", str);
        gsl_test_rel(snorm1, snorm0, tol, "snorm %s", str);
      }

      /* weighted, L = square */
      {
        test_multifit_solve(lambda, X, y, w, NULL, Lsqr, &rnorm0, &snorm0, c0);
        test_multilarge_solve(T, lambda, X, y, w, NULL, Lsqr, &rnorm1, &snorm1, c1);

        sprintf(str, "random %s weighted Lsqr n=%zu p=%zu lambda=%g",
                T->name, n, p, lambda);
        test_compare_vectors(tol, c0, c1, str);

        gsl_test_rel(rnorm1, rnorm0, tol1, "rnorm %s", str);
        gsl_test_rel(snorm1, snorm0, tol, "snorm %s", str);
      }

      /* unweighted, L = square */
      {
        test_multifit_solve(lambda, X, y, NULL, NULL, Lsqr, &rnorm0, &snorm0, c0);
        test_multilarge_solve(T, lambda, X, y, NULL, NULL, Lsqr, &rnorm1, &snorm1, c1);

        sprintf(str, "random %s unweighted Lsqr n=%zu p=%zu lambda=%g",
                T->name, n, p, lambda);
        test_compare_vectors(tol, c0, c1, str);

        gsl_test_rel(rnorm1, rnorm0, tol1, "rnorm %s", str);
        gsl_test_rel(snorm1, snorm0, tol, "snorm %s", str);
      }

      /* weighted, L = tall */
      {
        test_multifit_solve(lambda, X, y, w, NULL, Ltall, &rnorm0, &snorm0, c0);
        test_multilarge_solve(T, lambda, X, y, w, NULL, Ltall, &rnorm1, &snorm1, c1);

        sprintf(str, "random %s weighted Ltall n=%zu p=%zu lambda=%g",
                T->name, n, p, lambda);
        test_compare_vectors(tol, c0, c1, str);

        gsl_test_rel(rnorm1, rnorm0, tol1, "rnorm %s", str);
        gsl_test_rel(snorm1, snorm0, tol, "snorm %s", str);
      }

      /* unweighted, L = tall */
      {
        test_multifit_solve(lambda, X, y, NULL, NULL, Ltall, &rnorm0, &snorm0, c0);
        test_multilarge_solve(T, lambda, X, y, NULL, NULL, Ltall, &rnorm1, &snorm1, c1);

        sprintf(str, "random %s unweighted Ltall n=%zu p=%zu lambda=%g",
                T->name, n, p, lambda);
        test_compare_vectors(tol, c0, c1, str);

        gsl_test_rel(rnorm1, rnorm0, tol1, "rnorm %s", str);
        gsl_test_rel(snorm1, snorm0, tol, "snorm %s", str);
      }
    }

  gsl_matrix_free(X);
  gsl_vector_free(y);
  gsl_vector_free(c);
  gsl_vector_free(w);
  gsl_vector_free(diagL);
  gsl_matrix_free(Lsqr);
  gsl_matrix_free(Ltall);
  gsl_vector_free(c0);
  gsl_vector_free(c1);
}

int
main (void)
{
  gsl_rng *r = gsl_rng_alloc(gsl_rng_default);

  gsl_ieee_env_setup();

  {
    const double tol1 = 1.0e-8;
    const double tol2 = 1.0e-11;
    const size_t n_vals[] = { 40, 356, 501 };
    const size_t p_vals[] = { 40, 213, 345 };
    size_t i;

    for (i = 0; i < 2; ++i)
      {
        size_t n = n_vals[i];
        size_t p = p_vals[i];

        /* generate random ill-conditioned LS system and test */
        test_random(gsl_multilarge_linear_normal, n, p, tol1, r);
        test_random(gsl_multilarge_linear_tsqr, n, p, tol2, r);
      }
  }

  gsl_rng_free(r);

  exit (gsl_test_summary ());
}