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|
2010-05-01 22:14 warnes
* [r1434] DESCRIPTION: Update version number for new release
2010-05-01 22:03 warnes
* [r1433] DESCRIPTION, man/addLast.Rd, man/ask.Rd,
man/binsearch.Rd, man/capture.Rd, man/combinations.Rd,
man/defmacro.Rd, man/dirichlet.Rd, man/foldchange.Rd,
man/invalid.Rd, man/keywords.Rd, man/logit.Rd, man/mixedsort.Rd,
man/oddeven.Rd, man/permute.Rd, man/quantcut.Rd, man/running.Rd,
man/scat.Rd, man/setTCPNoDelay.Rd, man/smartbind.Rd: Change
Greg's email address to greg@warnes.net
2010-05-01 21:59 warnes
* [r1432] R/checkRVersion.R: Fix error in checkRVersion()
2010-04-28 17:23 ggrothendieck2
* [r1431] R/quantcut.R, R/strmacro.R, man/binsearch.Rd,
man/capture.Rd, man/setTCPNoDelay.Rd: fixed problems with R CMD
CHECK
2009-05-09 03:35 warnes
* [r1328] man/keywords.Rd: Escape $ in .Rd file to avoid latex
issues
2009-05-09 03:26 warnes
* [r1327] ChangeLog, NEWS, inst/NEWS: Update NEWS and create
softlinks for NEWS and ChangeLog in top level directory
2009-05-09 03:15 warnes
* [r1326] NEWS, inst, inst/NEWS: Move actual NEWS file into inst.
2009-05-09 03:13 warnes
* [r1325] DESCRIPTION, man/addLast.Rd, man/binsearch.Rd,
man/capture.Rd, man/combinations.Rd, man/defmacro.Rd,
man/dirichlet.Rd, man/foldchange.Rd, man/gtools-deprecated.Rd,
man/invalid.Rd, man/logit.Rd, man/mixedsort.Rd, man/oddeven.Rd,
man/permute.Rd, man/quantcut.Rd, man/running.Rd, man/scat.Rd,
man/setTCPNoDelay.Rd, man/smartbind.Rd: Update Greg's email
address and fix Rd syntax errors
2009-02-16 15:34 warnes
* [r1313] src/Makevars.win: Correct windows make flags as suggested
by Brian Ripley.
2008-08-15 13:15 warnes
* [r1303] DESCRIPTION, NAMESPACE, R/keywords.R, man/keywords.Rd:
Add keywords() function to show /doc/KEYWORDS file
2008-05-29 23:19 warnes
* [r1285] R/newVersionAvailable.R: Add newVersionAvailable()
function to compare running and latest available R versions
2008-05-26 19:15 warnes
* [r1284] DESCRIPTION: Update license specification
2008-05-26 15:04 warnes
* [r1283] man/assert-deprecated.Rd: Remove 'assert' man page
2008-05-22 16:40 warnes
* [r1282] man/assert.R: Finish rename of assert.R to
assert-depricated.Rd
2008-05-22 16:35 warnes
* [r1281] R/checkRVersion.R: Add checkRVersion.R file
2008-05-22 16:34 warnes
* [r1280] man/assert-deprecated.Rd: Rename again to get correct
extension!
2008-05-22 16:30 warnes
* [r1279] NEWS: Update NEWS for 2.5.0
2008-05-22 16:17 warnes
* [r1278] man/checkRVersion.Rd: Add man page for checkRVersion
2008-05-22 16:16 warnes
* [r1277] man/assert-deprecated.R, man/assert.R: Rename
assert-deprecated.R to assert.R to meet R file name requirements.
2008-05-22 16:15 warnes
* [r1276] DESCRIPTION, NAMESPACE: Add checkRVersion to NAMESPACE,
and increment version in DESCRIPTION.
2008-05-22 16:14 warnes
* [r1275] man/gtools-deprecated.Rd: Remove broken SEE LSO reference
2008-04-12 19:42 warnes
* [r1259] man/defmacro.Rd: Improve text explanation of how
defmacro() and strmacro() differ from
function().
2008-04-12 19:19 warnes
* [r1258] NEWS, man/assert-deprecated.R, man/assert.Rd,
man/gtools-deprecated.Rd: assert() is now deprecated in favor of
base::stopifnot()
2008-04-12 19:19 warnes
* [r1257] R/assert.R, R/deprecated.R: Rename 'assert.R' to
'deprecated.R'.
2008-04-12 19:14 warnes
* [r1256] R/assert.R: Assert is now deprecated in favor of
base::stopifnot(), so add call to
.Deprecated() to inform the user.
2007-11-30 18:05 warnes
* [r1228] R/oddeven.R: Update defnitions of odd() and even() to use
modulus operator instead of division. Prettier, I think, :-D
2007-08-08 13:52 warnes
* [r1121] DESCRIPTION, R/binsearch.R: Fix bug identified by R-2.6's
check routings in binsearch()
2007-08-08 13:48 warnes
* [r1120] DESCRIPTION, NAMESPACE, NEWS, R/binsearch.R,
man/binsearch.Rd: Add the binsearch(), previously in the genetics
package.
2007-07-18 11:48 ggorjan
* [r1100] man/combinations.Rd: typo fixed
2007-04-12 21:16 warnes
* [r1088] NAMESPACE, NEWS, R/ask.R, man/ask.Rd: Add ask() function
to prompt the user and collect a single response.
2007-04-07 13:41 warnes
* [r1087] DESCRIPTION, R/mixedsort.R: Fix improper escapes in
regexp detected by R 2.5.0 package check.
2007-03-23 22:53 warnes
* [r1083] R/combinations.R: Allow permutations for r>n provided
repeats.allowed=TRUE
2006-11-28 00:53 warnes
* [r1023] man/smartbind.Rd: Replace F with FALSE in smartbind
example.
2006-11-27 22:42 warnes
* [r1022] man/smartbind.Rd: Replace T with TRUE in smartbind
example
2006-11-27 21:40 warnes
* [r1021] data/ELISA.rda: Temprary remove to reset binary flag
2006-11-27 21:40 warnes
* [r1020] data/ELISA.rda: Temprary remove to reset binary flag
2006-11-27 21:34 warnes
* [r1019] DESCRIPTION, NAMESPACE, NEWS, R/smartbind.R,
man/smartbind.Rd: Add smartbind() to list of exported functions,
and add corresponding
documentation file.
2006-11-27 20:52 warnes
* [r1018] DESCRIPTION: Update my email address
2006-11-14 22:25 ggorjan
* [r1012] trunk/gdata/man/combine.Rd,
trunk/gdata/man/frameApply.Rd, trunk/gmodels/R/ci.R,
trunk/gmodels/R/fast.prcomp.R, trunk/gmodels/man/ci.Rd,
trunk/gplots/R/bandplot.R, trunk/gplots/R/boxplot.n.R,
trunk/gplots/R/lowess.R, trunk/gplots/R/plot.lm.R,
trunk/gplots/R/plotCI.R, trunk/gplots/R/plotmeans.R,
trunk/gplots/R/residplot.R, trunk/gplots/R/wapply.R,
trunk/gplots/man/boxplot.n.Rd, trunk/gplots/man/plotCI.Rd,
trunk/gplots/man/plotmeans.Rd, R/combinations.R, R/running.R,
man/ELISA.Rd, man/combinations.Rd: Removed executable property
2006-08-02 22:21 warnes
* [r977] trunk/BalloonPlotPaper/BalloonPlot.pdf,
trunk/BalloonPlotPaper/BalloonPlot.tex,
trunk/MSOfficeUtil/DESCRIPTION,
trunk/PathwayModeling/thesispaper/slides.tex,
trunk/RMCMC/DESCRIPTION, trunk/RMCMC/man/make.density.Rd,
trunk/Rlsf/DESCRIPTION, trunk/Rlsf/man/lsf.numcpu.Rd,
trunk/Rlsf/man/lsf.parRapply.Rd, trunk/Rlsf/man/scat.Rd,
trunk/bwRF/DESCRIPTION, trunk/bwRF/man/RF.Rd,
trunk/exp.ssize/inst/doc/ssize.pdf,
trunk/exp.ssize/inst/doc/ssize.tex, trunk/fork/DESCRIPTION,
trunk/fork/man/exit.Rd, trunk/fork/man/fork.Rd,
trunk/fork/man/getpid.Rd, trunk/fork/man/kill.Rd,
trunk/fork/man/signame.Rd, trunk/fork/man/wait.Rd,
trunk/gdata/inst/doc/gregmisc.tex,
trunk/gdata/man/ConvertMedUnits.Rd,
trunk/gdata/man/aggregate.table.Rd, trunk/gdata/man/combine.Rd,
trunk/gdata/man/interleave.Rd, trunk/gdata/man/matchcols.Rd,
trunk/gdata/man/nobs.Rd, trunk/gdata/man/read.xls.Rd,
trunk/gdata/man/rename.vars.Rd, trunk/gdata/man/reorder.Rd,
trunk/gdata/man/trim.Rd, trunk/gdata/man/unmatrix.Rd,
trunk/gdata/man/upperTriangle.Rd,
trunk/gmodels/man/fast.prcomp.Rd,
trunk/gmodels/man/fit.contrast.Rd, trunk/gmodels/man/glh.test.Rd,
trunk/gmodels/man/make.contrasts.Rd,
trunk/gplots/inst/doc/BalloonPlot.pdf,
trunk/gplots/man/balloonplot.Rd, trunk/gplots/man/bandplot.Rd,
trunk/gplots/man/boxplot.n.Rd, trunk/gplots/man/colorpanel.Rd,
trunk/gplots/man/hist2d.Rd, trunk/gplots/man/ooplot.Rd,
trunk/gplots/man/overplot.Rd, trunk/gplots/man/plot.lm2.Rd,
trunk/gplots/man/plotCI.Rd, trunk/gplots/man/plotmeans.Rd,
trunk/gplots/man/residplot.Rd, trunk/gplots/man/sinkplot.Rd,
trunk/gplots/man/smartlegend.Rd, trunk/gplots/man/space.Rd,
trunk/gplots/man/textplot.Rd, trunk/gplots/man/wapply.Rd,
trunk/gregmisc/DESCRIPTION,
trunk/gregmisc/gregmisc/DESCRIPTION.standalone,
trunk/gregmisc/inst/doc/gregmisc.tex, man/addLast.Rd,
man/assert.Rd, man/capture.Rd, man/combinations.Rd,
man/defmacro.Rd, man/dirichlet.Rd, man/foldchange.Rd,
man/invalid.Rd, man/logit.Rd, man/mixedsort.Rd, man/oddeven.Rd,
man/permute.Rd, man/quantcut.Rd, man/running.Rd, man/scat.Rd,
man/setTCPNoDelay.Rd, trunk/nws/DESCRIPTION,
trunk/qvalue/DESCRIPTION, trunk/qvalue/man/print.qvalue.Rd,
trunk/ssize/DESCRIPTION, trunk/ssize/man/pow.Rd: Update my email
address
2006-05-05 18:13 nj7w
* [r958] man/combinations.Rd: Fixed minor typo - in {value} - n was
replaced by r
2006-05-05 16:55 nj7w
* [r957] NAMESPACE, man/capture.Rd: Fixed minor typos
2006-03-01 19:12 warnes
* [r903] R/smartbind.R: Add smartbind function
2006-01-18 16:28 warnes
* [r845] man/mixedsort.Rd: Add concept tags to make mixedsort
easier to locate.
2005-12-21 15:23 warnes
* [r837] DESCRIPTION: Update version number and date
2005-12-21 06:11 warnes
* [r836] NEWS: Note changes for 2.2.3
2005-12-21 06:08 warnes
* [r835] src/Makevars.win, src/setTCPNoDelay.c: Should now work on
Windows
2005-12-20 20:25 warnes
* [r834] src/setTCPNoDelay.c: Temporary fix to allow
setTCPNoDelay.c to compile on Windows. If compiled on windows
calling setTCPNoDelay will just raise an error.
2005-12-14 15:48 warnes
* [r813] src/setTCPNoDelay.c: Change C++ comment to standard
comment
2005-12-13 16:19 nj7w
* [r810] ChangeLog: *** empty log message ***
2005-12-13 16:18 nj7w
* [r809] trunk/gplots/ChangeLog, trunk/gplots/NEWS, NEWS: Updated
NEWS and removed ChangeLog
2005-12-12 22:10 nj7w
* [r800] DESCRIPTION: Updated version for CRAN release
2005-12-08 20:21 warnes
* [r790] src, src/setTCPNoDelay.c: Add C source code for
setTCPNoDelay.
2005-12-01 16:54 nj7w
* [r776] trunk/gmodels/man/ci.Rd, trunk/gmodels/man/coefFrame.Rd,
trunk/gmodels/man/estimable.Rd,
trunk/gmodels/man/fit.contrast.Rd,
trunk/gmodels/man/make.contrasts.Rd,
trunk/gplots/man/balloonplot.Rd, trunk/gplots/man/bandplot.Rd,
trunk/gplots/man/boxplot.n.Rd, trunk/gplots/man/colorpanel.Rd,
trunk/gplots/man/overplot.Rd, trunk/gplots/man/plotmeans.Rd,
trunk/gplots/man/textplot.Rd, trunk/gplots/man/wapply.Rd,
man/combinations.Rd, man/foldchange.Rd, man/invalid.Rd,
man/logit.Rd, man/mixedsort.Rd, man/oddeven.Rd, man/quantcut.Rd,
man/running.Rd: Updated Greg's email address
2005-11-29 22:30 warnes
* [r769] NAMESPACE: Add UseDynLib to NAMESPACE so the shared
library gets properly loaded.
2005-11-29 22:25 warnes
* [r768] R/setTCPNoDelay.R: - Remove debugging comments
- Change return value on success to "Success".
2005-11-22 22:54 warnes
* [r758] NAMESPACE: NAMESPACE
2005-11-22 22:54 warnes
* [r757] NEWS: Update news for 2.2.1 release.
2005-11-22 22:51 warnes
* [r756] man/addLast.Rd, man/setTCPNoDelay.Rd: Fixes for R CMD
check
2005-11-22 22:31 warnes
* [r755] DESCRIPTION, NAMESPACE, R/setTCPNoDelay.R,
man/setTCPNoDelay.Rd: Add setTCPNoDelay() function and
documentation
2005-11-22 15:46 warnes
* [r745] R/addLast.R, man/addLast.Rd: New function 'addLast' that
adds functions to R's .Last() so that
they will be executed when R is terminating.
2005-09-22 18:12 warnes
* [r678] DESCRIPTION, NAMESPACE, man/defmacro.Rd: More changes for
strmacro(), also changes for 2.1.1 release
2005-09-22 17:26 warnes
* [r677] R/defmacro.R, R/strmacro.R, man/defmacro.Rd: Add strmaco()
which defines functions that use strings for macro definition
2005-09-21 18:51 warnes
* [r676] DESCRIPTION, R/defmacro.R, man/defmacro.Rd: Add support
for DOTS/... arguments to defmacro
2005-09-12 15:44 nj7w
* [r671] trunk/gdata/man/aggregate.table.Rd,
trunk/gdata/man/interleave.Rd, trunk/gdata/man/matchcols.Rd,
trunk/gdata/man/nobs.Rd, trunk/gdata/man/read.xls.Rd,
trunk/gdata/man/rename.vars.Rd, trunk/gdata/man/trim.Rd,
trunk/gdata/man/unmatrix.Rd, trunk/gmodels/man/fast.prcomp.Rd,
trunk/gmodels/man/glh.test.Rd, trunk/gplots/man/hist2d.Rd,
trunk/gplots/man/ooplot.Rd, trunk/gplots/man/residplot.Rd,
trunk/gplots/man/sinkplot.Rd, trunk/gplots/man/smartlegend.Rd,
trunk/gplots/man/space.Rd, man/assert.Rd, man/dirichlet.Rd,
man/permute.Rd, man/scat.Rd: Updated Greg's email
2005-09-02 22:53 nj7w
* [r653] NAMESPACE: Exported assert
2005-09-02 22:53 nj7w
* [r652] DESCRIPTION: Updated the version number
2005-09-02 22:52 nj7w
* [r651] NEWS: Added NEWS
2005-09-02 22:52 nj7w
* [r650] ChangeLog: Added ChangeLog
2005-09-02 22:51 nj7w
* [r649] man/assert.Rd: Fixed syntax errors
2005-09-02 16:43 warnes
* [r648] R/assert.R, man/assert.Rd: Add assert() and documentation
2005-09-02 16:28 warnes
* [r647] man/defmacro.Rd: Fix problem in defmacro.Rd file: don't
use \code{} in the example section.
2005-08-31 20:00 warnes
* [r645] DESCRIPTION, NAMESPACE, R/defmacro.R, man/defmacro.Rd:
Adding the defmacro() function, extracted from
Lumley T. "Programmer's Niche: Macros in {R}", R News, 2001, Vol
1,
No. 3, pp 11--13, \url{http://CRAN.R-project.org/doc/Rnews/}
2005-08-31 16:18 warnes
* [r642] DESCRIPTION, DESCRIPTION.in: Add stand-alone DESCRIPTION
file and remove old DESCRIPTION.in file.
2005-06-13 17:08 nj7w
* [r626] R/mixedsort.R: Fixed a bug in mixedsort - check if
"which.na" and "which.blank" is numeric(0) before subsetting the
datasets.
2005-06-09 14:20 nj7w
* [r625] trunk/gdata/R/Args.R, trunk/gdata/R/aggregate.table.R,
trunk/gdata/R/combine.R, trunk/gdata/R/elem.R,
trunk/gdata/R/env.R, trunk/gdata/R/frameApply.R,
trunk/gdata/R/interleave.R, trunk/gdata/R/is.what.R,
trunk/gdata/R/keep.R, trunk/gdata/R/ll.R,
trunk/gdata/R/matchcols.R, trunk/gdata/R/nobs.R,
trunk/gdata/R/read.xls.R, trunk/gdata/R/rename.vars.R,
trunk/gdata/R/reorder.R, trunk/gdata/R/trim.R,
trunk/gdata/R/unmatrix.R, trunk/gdata/inst/perl/IO/AtomicFile.pm,
trunk/gdata/inst/perl/IO/InnerFile.pm,
trunk/gdata/inst/perl/IO/Lines.pm,
trunk/gdata/inst/perl/IO/Scalar.pm,
trunk/gdata/inst/perl/IO/Scalar.pm.html,
trunk/gdata/inst/perl/IO/ScalarArray.pm,
trunk/gdata/inst/perl/IO/Stringy.pm,
trunk/gdata/inst/perl/IO/Wrap.pm,
trunk/gdata/inst/perl/IO/WrapTie.pm,
trunk/gdata/man/aggregate.table.Rd, trunk/gdata/man/combine.Rd,
trunk/gdata/man/drop.levels.Rd, trunk/gdata/man/interleave.Rd,
trunk/gdata/man/nobs.Rd, trunk/gdata/man/rename.vars.Rd,
trunk/gdata/man/reorder.Rd, trunk/gmodels/R/ci.R,
trunk/gmodels/R/coefFrame.R, trunk/gmodels/R/estimable.R,
trunk/gmodels/R/fast.prcomp.R, trunk/gmodels/R/fit.contrast.R,
trunk/gmodels/R/glh.test.R, trunk/gmodels/R/make.contrasts.R,
trunk/gmodels/man/CrossTable.Rd, trunk/gmodels/man/ci.Rd,
trunk/gmodels/man/coefFrame.Rd, trunk/gmodels/man/estimable.Rd,
trunk/gmodels/man/fast.prcomp.Rd,
trunk/gmodels/man/fit.contrast.Rd, trunk/gmodels/man/glh.test.Rd,
trunk/gmodels/man/make.contrasts.Rd,
trunk/gplots/R/balloonplot.R, trunk/gplots/R/bandplot.R,
trunk/gplots/R/boxplot.n.R, trunk/gplots/R/colorpanel.R,
trunk/gplots/R/heatmap.2.R, trunk/gplots/R/hist2d.R,
trunk/gplots/R/lowess.R, trunk/gplots/R/ooplot.R,
trunk/gplots/R/overplot.R, trunk/gplots/R/plotCI.R,
trunk/gplots/R/plotmeans.R, trunk/gplots/R/qqnorm.aov.R,
trunk/gplots/R/residplot.R, trunk/gplots/R/rich.color.R,
trunk/gplots/R/sinkplot.R, trunk/gplots/R/smartlegend.R,
trunk/gplots/R/space.R, trunk/gplots/R/textplot.R,
trunk/gplots/R/wapply.R, trunk/gplots/man/1,
trunk/gplots/man/bandplot.Rd, trunk/gplots/man/barplot2.Rd,
trunk/gplots/man/boxplot.n.Rd, trunk/gplots/man/hist2d.Rd,
trunk/gplots/man/lowess.Rd, trunk/gplots/man/plotCI.Rd,
trunk/gplots/man/plotmeans.Rd, trunk/gplots/man/residplot.Rd,
trunk/gplots/man/space.Rd, trunk/gplots/man/wapply.Rd,
R/RSCompat.S, R/combinations.R, R/dirichlet.R, R/foldchange.R,
R/invalid.R, R/logit.R, R/mixedsort.R, R/oddeven.R, R/permute.R,
R/quantcut.R, R/running.R, R/scat.R, man/ELISA.Rd,
man/combinations.Rd, man/dirichlet.Rd, man/foldchange.Rd,
man/invalid.Rd, man/logit.Rd, man/mixedsort.Rd, man/oddeven.Rd,
man/permute.Rd, man/quantcut.Rd, man/running.Rd, man/scat.Rd:
Updating the version number, and various help files to
synchronize splitting of gregmisc bundle in 4 individual
components.
2005-05-10 22:05 warnes
* [r619] R/mixedsort.R: Fix handling of NA's in mixedorder. We were
using a high UTF character to try
to put NA's at the end of the sort order, but R 2.1.0 checks if
characters
are in the correct range. Instead, we explicitly force NA's to
the end.
2005-04-07 00:28 warnes
* [r606] NAMESPACE, R/scat.R, man/scat.Rd: - Add scat() function
which writes its arguments to stderr and
flushes so that output is immediately displayed, but only if
'getOption("DEBUG")' is true.
2005-04-02 04:19 warnes
* [r600] trunk/gdata/NAMESPACE, trunk/gdata/R/drop.levels.R,
trunk/gdata/man/drop.levels.Rd, NAMESPACE, R/drop.levels.R,
man/drop.levels.Rd: Move drop.levels() from gtools to gdata.
2005-04-02 04:17 warnes
* [r599] R/mixedsort.R: Minor reordering of functions in file
2005-04-02 04:14 warnes
* [r598] trunk/gdata/NAMESPACE, trunk/gdata/R/frameApply.R,
trunk/gdata/man/frameApply.Rd, NAMESPACE, R/frameApply.R,
man/frameApply.Rd: Move frameApply() to gdata package.
2005-04-02 03:28 warnes
* [r597] R/mixedsort.R: Fix error if only one value passed to
mixedorder.
2005-04-02 02:37 warnes
* [r596] R/quantcut.R, man/quantcut.Rd: Add proper handling where
more than one quantile obtains the same value
2005-04-01 23:00 warnes
* [r595] man/ELISA.Rd, man/combinations.Rd, man/dirichlet.Rd,
man/drop.levels.Rd, man/foldchange.Rd, man/invalid.Rd,
man/logit.Rd, man/mixedsort.Rd, man/oddeven.Rd, man/permute.Rd,
man/quantcut.Rd, man/running.Rd: Add CVS ID tag to file headers.
2005-04-01 23:00 warnes
* [r594] R/frameApply.R, man/frameApply.Rd: Fixes from Jim Rogers
for R CMD check problems in frameApply
2005-03-31 19:03 warnes
* [r591] R/drop.levels.R, R/frameApply.R, man/drop.levels.Rd,
man/frameApply.Rd: Updates to drop.levels() and frameApply() from
Jim Rogers
2005-03-31 19:01 warnes
* [r590] data, data/ELISA.rda, man/ELISA.Rd: Add ELISA data set
used by frameApply and drop.levels examples
2005-02-25 23:02 warnes
* [r562] man/frameApply.Rd: Replace 'T' with TRUE.
2005-02-25 22:54 warnes
* [r561] man/frameApply.Rd: Remove dependency on ELISA data set for
the example.
2005-02-25 21:00 warnes
* [r558] trunk/gregmisc/.tnatr:fnmap, trunk/gregmisc/DESCRIPTION,
NAMESPACE: Add drop.levels, frameApply to namespace export.
2005-02-15 00:41 warnes
* [r542] R/drop.levels.R, R/frameApply.R, man/drop.levels.Rd,
man/frameApply.Rd: Add frameApply and drop.levels contributed by
Jim Rogers.
2005-01-12 20:50 warnes
* [r515] trunk/gdata/DESCRIPTION.in, trunk/gmodels/DESCRIPTION.in,
trunk/gplots/DESCRIPTION.in, DESCRIPTION.in: Add dependency on R
1.9.0+ to prevent poeple from installing on old
versions of R which don't support namespaces.
2004-09-27 21:01 warneg
* [r461] trunk/gdata/DESCRIPTION, trunk/gdata/DESCRIPTION.in,
trunk/gdata/NAMESPACE, trunk/gdata/man/.Rhistory,
trunk/gmodels/DESCRIPTION, trunk/gmodels/DESCRIPTION.in,
trunk/gplots/DESCRIPTION, trunk/gplots/DESCRIPTION.in,
trunk/gplots/man/sinkplot.Rd, trunk/gplots/man/textplot.Rd,
trunk/gregmisc/.Rhistory, trunk/gregmisc/DESCRIPTION,
DESCRIPTION, DESCRIPTION.in, man/running.Rd: Updated to pass R
CMD check.
2004-09-03 17:27 warneg
* [r446] trunk/gdata/DESCRIPTION, trunk/gdata/DESCRIPTION.in,
trunk/gdata/NAMESPACE, trunk/gdata/R/Args.R,
trunk/gdata/R/aggregate.table.R, trunk/gdata/R/combine.R,
trunk/gdata/R/elem.R, trunk/gdata/R/env.R,
trunk/gdata/R/interleave.R, trunk/gdata/R/is.what.R,
trunk/gdata/R/keep.R, trunk/gdata/R/ll.R,
trunk/gdata/R/matchcols.R, trunk/gdata/R/nobs.R,
trunk/gdata/R/read.xls.R, trunk/gdata/R/rename.vars.R,
trunk/gdata/R/reorder.R, trunk/gdata/R/trim.R,
trunk/gdata/man/reorder.Rd, trunk/gmodels/DESCRIPTION,
trunk/gmodels/NAMESPACE, trunk/gmodels/R/CrossTable.R,
trunk/gmodels/R/ci.R, trunk/gmodels/R/estimable.R,
trunk/gmodels/R/fast.prcomp.R, trunk/gmodels/R/fit.contrast.R,
trunk/gmodels/R/glh.test.R, trunk/gmodels/R/make.contrasts.R,
trunk/gmodels/man/estimable.Rd,
trunk/gmodels/man/fit.contrast.Rd, trunk/gmodels/man/glh.test.Rd,
trunk/gmodels/man/make.contrasts.Rd, trunk/gplots/DESCRIPTION,
trunk/gplots/NAMESPACE, trunk/gplots/R/balloonplot.R,
trunk/gplots/R/bandplot.R, trunk/gplots/R/barplot2.R,
trunk/gplots/R/boxplot.n.R, trunk/gplots/R/colorpanel.R,
trunk/gplots/R/heatmap.2.R, trunk/gplots/R/hist2d.R,
trunk/gplots/R/lowess.R, trunk/gplots/R/ooplot.R,
trunk/gplots/R/overplot.R, trunk/gplots/R/plotCI.R,
trunk/gplots/R/plotmeans.R, trunk/gplots/R/qqnorm.aov.R,
trunk/gplots/R/residplot.R, trunk/gplots/R/rich.color.R,
trunk/gplots/R/sinkplot.R, trunk/gplots/R/smartlegend.R,
trunk/gplots/R/space.R, trunk/gplots/R/textplot.R,
trunk/gplots/R/wapply.R, DESCRIPTION, NAMESPACE, R/dirichlet.R,
R/foldchange.R, R/invalid.R, R/mixedsort.R, R/oddeven.R,
R/permute.R, R/quantcut.R, R/running.R, man/running.Rd: initial
bundle checkin
2004-09-02 17:14 warneg
* [r442] trunk/gdata/DESCRIPTION, trunk/gdata/DESCRIPTION.in,
trunk/gdata/NAMESPACE, trunk/gdata/man/.Rhistory,
trunk/gmodels/DESCRIPTION, trunk/gmodels/DESCRIPTION.in,
trunk/gmodels/NAMESPACE, trunk/gplots/DESCRIPTION,
trunk/gplots/DESCRIPTION.in, trunk/gplots/NAMESPACE,
trunk/gplots/man/1, trunk/gplots/man/residplot.Rd,
trunk/gregmisc/.Rhistory, DESCRIPTION, DESCRIPTION.in, NAMESPACE:
Initial revision
2004-08-27 21:57 warnes
* [r441] trunk/gdata/R/reorder.R, trunk/gdata/man/reorder.Rd,
R/mixedsort.R, man/mixedsort.Rd: Fixed bug in mixedsort, and
modified reorder.factor to use mixedsort.
2004-08-26 20:08 warnes
* [r440] R/mixedsort.R: - Fix bug pointed out by Jim Rogers.
- Use a more distictive internal separator: $@$ instead of just $
- Capitalization is now irrelevent for search order (unlike
ASCII).
2004-06-08 15:49 warnes
* [r372] R/running.R, man/running.Rd: Nitin Jain added by=
parameter to allow specifying separation between groups.
2004-05-26 13:40 warnes
* [r345] trunk/gdata/man/read.xls.Rd, man/combinations.Rd: Escape
underscores in email addresses so Latex is happy.
2004-05-26 13:18 warnes
* [r343] R/combinations.R: Replace 'T' with 'TRUE' to pass R CMD
check.
2004-05-25 17:11 warnes
* [r334] R/combinations.R: Remove extraneous comments.
2004-05-25 17:08 warnes
* [r333] R/combinations.R: Fix an error in the code when using
repeats.allow=T and r>2. Bug
report and fix both due to Elizabeth Purdom
<epurdom@stanford.edu>.
2004-05-24 17:36 warnes
* [r323] R/invalid.R: Check if argument is a vector before doing
is.na to avoid generating a warning.
2004-05-24 17:17 warnes
* [r322] R/invalid.R, man/invalid.Rd: Add invalid() function for
testing if a parameter value is non-missing, non-NA,
non-NULL.
2004-04-27 14:33 warnes
* [r321] R/running.R, man/running.Rd: Replaced argument `as.list'
with `simplify'. Updated documentation,
and updated examples appropriately.
2004-04-26 16:37 warnes
* [r320] R/running.R, man/running.Rd: Added as.list argument to
return one list element per evaluation.
2004-03-26 22:21 warnes
* [r303] man/combinations.Rd: Uncomment and fix large 'n' example.
2004-03-26 22:19 warnes
* [r301] man/running.Rd: - Update to match changes in running()
- Add examples to illustrate new arguments.
- Modify running correlation plot example to be more clear.
2004-03-26 22:12 warnes
* [r299] R/running.R: More of the same.
2004-03-26 15:34 warnes
* [r297] R/running.R: Fix bug discovered by Sean Davis
<sdavis2@mail.nih.gov>. The running
function took an improper shortcut. When allow.fewer=FALSE it was
still passing shorter lists of elements to the called function,
and
then overwriting the results for the shorter lists with NAs. The
code
now skips evaluation of the function on lists shorter than the
specified length when allow.fewer=FALSE.
2004-01-21 04:31 warnes
* [r277] trunk/gplots/R/textplot.R, R/capture.R: - Mark sprint() as
depreciated.
- Replace references to sprint with capture.output()
- Use match.arg for halign and valign arguments to
textplot.default.
- Fix textplot.character so that a vector of characters is
properly
displayed. Previouslt, character vectors were plotted on top of
each
other.
2003-12-03 02:46 warnes
* [r253] trunk/gdata/man/elem.Rd, trunk/gdata/man/ll.Rd,
trunk/gplots/man/lowess.Rd, trunk/gplots/man/textplot.Rd,
trunk/gplots/man/wapply.Rd, man/foldchange.Rd: - match function
argument defaults with 'usage'
2003-11-21 23:00 warnes
* [r237] man/foldchange.Rd: Removed 'deqn' call that was confusing
things.
2003-11-21 20:54 warnes
* [r234] man/logit.Rd: Add email address to author field
2003-11-21 20:35 warnes
* [r233] R/foldchange.R, man/foldchange.Rd: - new files
2003-11-21 19:54 warnes
* [r232] R/mixedsort.R, man/mixedsort.Rd: - Change 'T' to 'TRUE' in
mixedsort.R
- Add missing brace in mixedsort.Rd
2003-11-20 15:56 warnes
* [r230] R/oddeven.R, man/oddeven.Rd: - Move 'odd' and 'even'
functions to a separate file & provide documentation
2003-11-18 22:47 warnes
* [r227] R/mixedsort.R, man/mixedsort.Rd: - Renamed smartsort to
mixedsort and added documentation.
2003-11-10 22:11 warnes
* [r220] trunk/gdata/R/elem.R, trunk/gdata/R/env.R,
trunk/gdata/R/is.what.R, trunk/gdata/R/keep.R,
trunk/gdata/R/ll.R, trunk/gdata/man/elem.Rd,
trunk/gdata/man/env.Rd, trunk/gdata/man/is.what.Rd,
trunk/gdata/man/keep.Rd, trunk/gdata/man/ll.Rd,
trunk/gplots/R/heatmap.2.R, trunk/gplots/R/overplot.R,
trunk/gplots/R/plotmeans.R, trunk/gplots/R/space.R,
trunk/gplots/R/wapply.R, trunk/gregmisc/DESCRIPTION, R/capture.R,
man/capture.Rd: - Add files contributed by Arni Magnusson
<arnima@u.washington.edu>. As well as some of my own.
2003-05-23 18:14 warnes
* [r196] trunk/gdata/R/matchcols.R, trunk/gdata/man/matchcols.Rd,
R/logit.R, man/logit.Rd: - library() backported from 1.7-devel.
This version of the function
adds the "pos=" argument to specify where in the search path the
library should be placed.
- updated .First.lib to use library(...pos=3) for MASS to avoid
the
'genotype' data set in MASS from masking the genotype funciton in
genetics when it loads gregmisc
- Added logit() inv.logit() matchcols() function and
corresponding docs
2003-04-22 16:00 warnes
* [r189] man/combinations.Rd: - Fixed tpyo in example that allowed
combinations(500,2) to run when
it should have been ignred for testing..
2003-04-10 16:22 warnes
* [r186] man/combinations.Rd: - Added note about the need to
increase options("expressions") to use
large values for 'n'. Prompted by bug report from Huan Huang
<huan.huang@bnpparibas.com
2003-04-04 13:58 warnes
* [r183] R/RSCompat.S: - Replace 'T' with 'TRUE'
2003-04-04 13:49 warnes
* [r182] trunk/gplots/R/balloonplot.R,
trunk/gplots/man/qqnorm.aov.Rd, R/dirichlet.R: - Change
occurences of 'T' to 'TRUE'
2003-04-04 13:46 warnes
* [r181] man/capture.Rd: - Allow optional arguments to sprint to be
passed to print
- Fix R CMD check errors
2003-04-04 13:45 warnes
* [r180] R/capture.R: - Allow optional arguments to sprint to be
passed to print
2003-04-03 13:20 warnes
* [r177] man/capture.Rd: - Had mistyped 'sprint' as 'sprintf'.
2003-04-03 13:18 warnes
* [r176] man/capture.Rd: - Add help file for capture and sprintf.
2003-04-02 22:28 warnes
* [r174] R/capture.R: - Added file 'capture.R' containing capture()
and sprint().
2003-03-07 15:48 warnes
* [r168] trunk/gmodels/R/fast.prcomp.R, trunk/gplots/R/hist2d.R,
trunk/gplots/R/qqnorm.aov.R, trunk/gregmisc/DESCRIPTION,
R/RSCompat.S: - Minor changes to code to allow the package to be
provided as an
S-Plus chapter.
2003-01-30 21:56 warnes
* [r161] man/running.Rd: - Fixed typo in email address.
2003-01-02 15:42 warnes
* [r148] R/RSCompat.S: - Add nlevels function.
2002-10-11 18:22 warnes
* [r133] R/permute.R, man/permute.Rd: - Add permute() function
(wraper for sample) and man page
2002-10-11 18:21 warnes
* [r132] man/dirichlet.Rd: - Escaped underscores in my email
address that was causing a parse
error in the {r,p}dirichlet man page.
2002-09-30 20:43 warnes
* [r128] R/dirichlet.R, man/dirichlet.Rd: - Added rdirichlet() and
ddirichlet() with accompaning help page and tests.
2002-09-24 14:57 warnes
* [r122] R/running.R: - Fixed error where running was always
calling running2 with
'fun=mean', ignoring the specified funtion.
2002-09-23 13:59 warnes
* [r117] trunk/gdata/R/aggregate.table.R, trunk/gdata/R/combine.R,
trunk/gdata/R/interleave.R, trunk/gdata/R/nobs.R,
trunk/gdata/man/aggregate.table.Rd, trunk/gdata/man/combine.Rd,
trunk/gdata/man/interleave.Rd, trunk/gdata/man/nobs.Rd,
trunk/gdata/man/rename.vars.Rd, trunk/gdata/man/reorder.Rd,
trunk/gmodels/R/ci.R, trunk/gmodels/man/estimable.Rd,
trunk/gmodels/man/glh.test.Rd, trunk/gplots/R/boxplot.n.R,
trunk/gplots/R/hist2d.R, trunk/gplots/R/lowess.R,
trunk/gplots/R/residplot.R, trunk/gplots/man/bandplot.Rd,
trunk/gplots/man/hist2d.Rd, trunk/gplots/man/lowess.Rd,
trunk/gplots/man/plotCI.Rd, trunk/gplots/man/space.Rd,
man/combinations.Rd, man/quantcut.Rd: - Modified all files to
include CVS Id and Log tags.
2002-09-23 13:38 warnes
* [r116] trunk/gmodels/R/CrossTable.R,
trunk/gmodels/man/CrossTable.Rd, trunk/gplots/R/barplot2.R,
trunk/gplots/man/barplot2.Rd, trunk/gregmisc/DESCRIPTION,
R/combinations.R: - Added CrossTable() and barplot2() code and
docs contributed by Marc Schwartz.
- Permit combinations() to be used when r>n provided
repeat.allowed=TRUE
- Bumped up version number
2002-08-01 19:37 warnes
* [r114] trunk/gmodels/R/ci.R, trunk/gmodels/man/ci.Rd,
trunk/gmodels/man/estimable.Rd, trunk/gmodels/man/glh.test.Rd,
trunk/gplots/R/hist2d.R, trunk/gplots/R/wapply.R,
trunk/gregmisc/DESCRIPTION, R/running.R: - Corrected
documentation mismatch for ci, ci.default.
- Replaced all occurences of '_' for assignment with '<-'.
- Replaced all occurences of 'T' or 'F' for 'TRUE' and 'FALSE'
with
the spelled out version.
- Updaded version number and date.
2002-04-09 00:51 warneg
* [r109] trunk/gdata/R/rename.vars.R,
trunk/gdata/man/aggregate.table.Rd,
trunk/gdata/man/interleave.Rd, trunk/gdata/man/reorder.Rd,
trunk/gmodels/R/ci.R, trunk/gmodels/R/estimable.R,
trunk/gmodels/R/glh.test.R, trunk/gmodels/man/glh.test.Rd,
trunk/gplots/R/bandplot.R, trunk/gplots/R/boxplot.n.R,
trunk/gplots/R/hist2d.R, trunk/gplots/R/plot.lm.R,
trunk/gplots/R/plotCI.R, trunk/gplots/R/plotmeans.R,
trunk/gplots/R/residplot.R, trunk/gplots/R/space.R,
trunk/gplots/R/wapply.R, trunk/gplots/man/bandplot.Rd,
trunk/gplots/man/boxplot.n.Rd, trunk/gplots/man/hist2d.Rd,
trunk/gplots/man/plotmeans.Rd, trunk/gplots/man/space.Rd,
trunk/gplots/man/wapply.Rd, trunk/gregmisc/DESCRIPTION,
R/combinations.R, man/combinations.Rd, man/running.Rd: Checkin
for version 0.5.3
2002-03-26 14:49 warneg
* [r97] man/quantcut.Rd: Initial Checkin
2002-03-26 14:29 warneg
* [r96] R/quantcut.R: Initial checkin.
2002-03-20 03:44 warneg
* [r91] R/RSCompat.S: - Added definition of is.R function.
- Added boxplot.formula
2002-03-07 23:39 warneg
* [r90] man/running.Rd: - Added documentation and example for
running2
2002-03-07 23:38 warneg
* [r89] R/running.R: - Added "running2", which handles both
univariate and bivariate cases
- Modified "running" to call "running2"
2002-02-05 02:20 warneg
* [r75] R/RSCompat.S: - Fix typo that caused code meant to run only
under S-Plus to run
under R, causing problems.
2001-12-19 22:45 warneg
* [r67] R/RSCompat.S: - Added code for %in%.
2001-09-18 14:15 warneg
* [r18] trunk/gplots/R/plotCI.R, trunk/gplots/R/plotmeans.R,
trunk/gregmisc/DESCRIPTION, R/RSCompat.S: Release 0.3.2
2001-09-01 19:19 warneg
* [r17] R/RSCompat.S: Initial checkin.
2001-09-01 00:01 warneg
* [r16] trunk/gplots/man/wapply.Rd, trunk/gregmisc/DESCRIPTION,
R/running.R, man/running.Rd: Release 0.3.0
2001-08-25 05:53 warneg
* [r13] R/running.R: Initial CVS checkin.
2001-08-25 05:50 warneg
* [r11] man/combinations.Rd: Fixed a typo and a syntax error.
2001-08-25 03:59 warneg
* [r7] man/running.Rd: Initial Checkin
2001-06-29 13:24 warneg
* [r6] ., R, R/combinations.R, man, man/combinations.Rd: Initial
revision.
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