File: one_recombination.expected.vcf

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##fileformat=VCFv4.1
##FORMAT=<ID=AB,Number=1,Type=String,Description="Alt Base">
#CHROM	POS	ID	REF	ALT	QUAL	FILTER	INFO	FORMAT	sequence_1	sequence_2	sequence_3	sequence_4	sequence_5	sequence_6	sequence_7	sequence_8	sequence_9	sequence_10	
1	1	.	A	C,-	.	.	.	AB	A	C	-	-	-	-	-	-	-	A	
1	6	.	A	-,C	.	.	.	AB	A	-	C	-	-	-	-	-	-	A	
1	8	.	A	-,C	.	.	.	AB	A	-	C	-	-	-	-	-	-	A	
1	9	.	A	-,C	.	.	.	AB	A	-	-	C	-	-	-	-	-	A	
1	11	.	A	-,C	.	.	.	AB	A	-	-	C	-	-	-	-	-	A	
1	12	.	A	-,C,N	.	.	.	AB	A	-	-	-	C	-	-	-	-	A	
1	13	.	A	C,-,N	.	.	.	AB	A	C	-	-	-	-	-	-	-	A	
1	14	.	A	-,C,N	.	.	.	AB	A	-	-	-	C	-	-	-	-	A	
1	18	.	A	C	.	.	.	AB	A	A	A	A	A	A	C	A	A	A	
1	19	.	A	C	.	.	.	AB	A	A	A	A	A	A	C	A	A	A	
1	20	.	A	C	.	.	.	AB	A	A	A	A	A	A	C	A	A	A	
1	26	.	A	C	.	.	.	AB	A	A	A	A	C	A	A	A	A	A	
1	27	.	A	C	.	.	.	AB	A	A	A	A	C	A	A	A	A	A	
1	28	.	A	C	.	.	.	AB	A	A	A	A	C	A	A	A	A	A	
1	30	.	A	C	.	.	.	AB	A	A	C	A	A	A	A	A	A	A	
1	31	.	A	C	.	.	.	AB	A	A	C	A	A	A	A	A	A	A	
1	32	.	A	C	.	.	.	AB	A	A	C	A	A	A	A	A	A	A	
1	33	.	C	A	.	.	.	AB	C	A	A	A	A	A	A	A	A	A	
1	34	.	C	A	.	.	.	AB	C	A	A	A	A	A	A	A	A	A	
1	35	.	C	A	.	.	.	AB	C	A	A	A	A	A	A	A	A	A	
1	46	.	A	C	.	.	.	AB	A	A	A	A	A	A	C	A	A	A	
1	47	.	A	C	.	.	.	AB	A	A	A	A	A	A	C	A	A	A	
1	48	.	A	C	.	.	.	AB	A	A	A	A	A	A	C	A	A	A	
1	54	.	A	C	.	.	.	AB	A	A	A	A	C	A	A	A	A	A	
1	55	.	A	C	.	.	.	AB	A	A	A	A	C	A	A	A	A	A	
1	56	.	A	C	.	.	.	AB	A	A	A	A	C	A	A	A	A	A	
1	58	.	A	C	.	.	.	AB	A	A	C	A	A	A	A	A	A	A	
1	59	.	A	C	.	.	.	AB	A	A	C	A	A	A	A	A	A	A	
1	60	.	A	C	.	.	.	AB	A	A	C	A	A	A	A	A	A	A	
1	61	.	C	A	.	.	.	AB	C	A	A	A	A	A	A	A	A	A	
1	62	.	C	A	.	.	.	AB	C	A	A	A	A	A	A	A	A	A	
1	169	.	A	C	.	.	.	AB	A	A	A	A	A	C	A	A	A	A