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/*
* $Id: coerce.c 25076 2022-10-11 13:48:10Z yeti-dn $
* Copyright (C) 2016-2021 David Necas (Yeti).
* E-mail: yeti@gwyddion.net.
*
* This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public
* License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any
* later version.
*
* This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied
* warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more
* details.
*
* You should have received a copy of the GNU General Public License along with this program; if not, write to the
* Free Software Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301, USA.
*/
#include "config.h"
#include <stdlib.h>
#include <string.h>
#include <libgwyddion/gwymacros.h>
#include <libgwyddion/gwymath.h>
#include <libgwyddion/gwythreads.h>
#include <libprocess/arithmetic.h>
#include <libprocess/filters.h>
#include <libprocess/stats.h>
#include <libgwydgets/gwystock.h>
#include <libgwymodule/gwymodule-process.h>
#include <app/gwyapp.h>
#include <app/gwymoduleutils.h>
#include "libgwyddion/gwyomp.h"
#include "preview.h"
#define RUN_MODES (GWY_RUN_IMMEDIATE | GWY_RUN_INTERACTIVE)
typedef enum {
COERCE_DISTRIBUTION_DATA = 0,
COERCE_DISTRIBUTION_UNIFORM = 1,
COERCE_DISTRIBUTION_GAUSSIAN = 2,
COERCE_DISTRIBUTION_LEVELS = 3,
COERCE_DISTRIBUTION_SKEW_NORMAL = 4,
} CoerceDistributionType;
typedef enum {
COERCE_PROCESSING_FIELD = 0,
COERCE_PROCESSING_ROWS = 1,
} CoerceProcessingType;
typedef enum {
COERCE_LEVELS_UNIFORM = 0,
COERCE_LEVELS_EQUIAREA = 1,
} CoerceLevelsType;
enum {
PARAM_DISTRIBUTION,
PARAM_LEVEL_TYPE,
PARAM_NLEVELS,
PARAM_PROCESSING,
PARAM_SKEW,
PARAM_UPDATE,
PARAM_TEMPLATE,
};
typedef struct {
gdouble z;
guint k;
} ValuePos;
typedef struct {
GwyParams *params;
GwyDataField *field;
GwyDataField *result;
} ModuleArgs;
typedef struct {
ModuleArgs *args;
GtkWidget *dialog;
GwyParamTable *table;
GwyContainer *data;
} ModuleGUI;
static gboolean module_register (void);
static GwyParamDef* define_module_params (void);
static void coerce (GwyContainer *data,
GwyRunType runtype);
static void execute (ModuleArgs *args);
static GwyDialogOutcome run_gui (ModuleArgs *args,
GwyContainer *data,
gint id);
static void param_changed (ModuleGUI *gui,
gint id);
static void preview (gpointer user_data);
static gboolean template_filter (GwyContainer *data,
gint id,
gpointer user_data);
static void coerce_do_field (GwyDataField *field,
GwyDataField *result,
GwyParams *params);
static void coerce_do_field_levels (GwyDataField *field,
GwyDataField *result,
GwyParams *params);
static void coerce_do_rows (GwyDataField *field,
GwyDataField *result,
GwyParams *params);
static void build_values_levels (const ValuePos *vpos,
gdouble *z,
guint n,
guint nlevels);
static void build_values_uniform (gdouble *z,
guint n,
gdouble min,
gdouble max);
static void build_values_gaussian (gdouble *z,
guint n,
gdouble mean,
gdouble rms);
static void build_values_skew_normal(gdouble *z,
guint n,
gdouble mean,
gdouble rms,
gdouble skew);
static void build_values_from_data (gdouble *z,
guint n,
const gdouble *data,
guint ndata);
static void sanitise_params (ModuleArgs *args);
static GwyModuleInfo module_info = {
GWY_MODULE_ABI_VERSION,
&module_register,
N_("Transforms surfaces to have prescribed statistical properties."),
"Yeti <yeti@gwyddion.net>",
"2.0",
"David Nečas (Yeti)",
"2016",
};
GWY_MODULE_QUERY2(module_info, coerce)
static gboolean
module_register(void)
{
gwy_process_func_register("coerce",
(GwyProcessFunc)&coerce,
N_("/_Distortion/Co_erce..."),
GWY_STOCK_ENFORCE_DISTRIBUTION,
RUN_MODES,
GWY_MENU_FLAG_DATA,
_("Enforce prescribed statistical properties"));
return TRUE;
}
static GwyParamDef*
define_module_params(void)
{
static const GwyEnum distributions[] = {
{ N_("distribution|Uniform"), COERCE_DISTRIBUTION_UNIFORM, },
{ N_("distribution|Gaussian"), COERCE_DISTRIBUTION_GAUSSIAN, },
{ N_("distribution|Skew-normal"), COERCE_DISTRIBUTION_SKEW_NORMAL, },
{ N_("As another data"), COERCE_DISTRIBUTION_DATA, },
{ N_("Discrete levels"), COERCE_DISTRIBUTION_LEVELS, },
};
static const GwyEnum processings[] = {
{ N_("Entire image"), COERCE_PROCESSING_FIELD, },
{ N_("By row (identically)"), COERCE_PROCESSING_ROWS, },
};
static const GwyEnum leveltypes[] = {
{ N_("distribution|Uniform"), COERCE_LEVELS_UNIFORM, },
{ N_("Same area"), COERCE_LEVELS_EQUIAREA, },
};
static GwyParamDef *paramdef = NULL;
if (paramdef)
return paramdef;
paramdef = gwy_param_def_new();
gwy_param_def_set_function_name(paramdef, gwy_process_func_current());
gwy_param_def_add_gwyenum(paramdef, PARAM_DISTRIBUTION, "distribution", _("Coerce value distribution to"),
distributions, G_N_ELEMENTS(distributions), COERCE_DISTRIBUTION_UNIFORM);
gwy_param_def_add_gwyenum(paramdef, PARAM_LEVEL_TYPE, "level_type", _("Level _type"),
leveltypes, G_N_ELEMENTS(leveltypes), COERCE_LEVELS_EQUIAREA);
gwy_param_def_add_int(paramdef, PARAM_NLEVELS, "nlevels", _("Number of _levels"), 2, 16384, 4);
gwy_param_def_add_gwyenum(paramdef, PARAM_PROCESSING, "processing", _("Data processing"),
processings, G_N_ELEMENTS(processings), COERCE_PROCESSING_FIELD);
gwy_param_def_add_double(paramdef, PARAM_SKEW, "skew", _("_Skew"), -0.0, 1.0, 0.5);
gwy_param_def_add_instant_updates(paramdef, PARAM_UPDATE, "update", NULL, TRUE);
gwy_param_def_add_image_id(paramdef, PARAM_TEMPLATE, "template", _("_Template"));
return paramdef;
}
static void
coerce(GwyContainer *data, GwyRunType runtype)
{
ModuleArgs args;
GwyDialogOutcome outcome = GWY_DIALOG_PROCEED;
gint id, newid;
g_return_if_fail(runtype & RUN_MODES);
gwy_app_data_browser_get_current(GWY_APP_DATA_FIELD, &args.field,
GWY_APP_DATA_FIELD_ID, &id,
0);
g_return_if_fail(args.field);
args.result = gwy_data_field_new_alike(args.field, FALSE);
args.params = gwy_params_new_from_settings(define_module_params());
sanitise_params(&args);
if (runtype == GWY_RUN_INTERACTIVE) {
outcome = run_gui(&args, data, id);
gwy_params_save_to_settings(args.params);
if (outcome == GWY_DIALOG_CANCEL)
goto end;
}
if (outcome == GWY_DIALOG_PROCEED)
execute(&args);
newid = gwy_app_data_browser_add_data_field(args.result, data, TRUE);
gwy_app_sync_data_items(data, data, id, newid, FALSE,
GWY_DATA_ITEM_PALETTE,
GWY_DATA_ITEM_RANGE_TYPE,
GWY_DATA_ITEM_REAL_SQUARE,
0);
gwy_app_set_data_field_title(data, newid, _("Coerced"));
gwy_app_channel_log_add_proc(data, id, newid);
end:
g_object_unref(args.result);
g_object_unref(args.params);
}
static GwyDialogOutcome
run_gui(ModuleArgs *args, GwyContainer *data, gint id)
{
GwyDialogOutcome outcome;
GtkWidget *hbox, *dataview;
GwyDialog *dialog;
GwyParamTable *table;
ModuleGUI gui;
gwy_clear(&gui, 1);
gui.args = args;
gui.data = gwy_container_new();
gwy_container_set_object_by_name(gui.data, "/0/data", args->result);
gwy_app_sync_data_items(data, gui.data, id, 0, FALSE,
GWY_DATA_ITEM_PALETTE,
GWY_DATA_ITEM_RANGE,
GWY_DATA_ITEM_REAL_SQUARE,
0);
gui.dialog = gwy_dialog_new(_("Coerce Statistics"));
dialog = GWY_DIALOG(gui.dialog);
gwy_dialog_add_buttons(dialog, GWY_RESPONSE_UPDATE, GWY_RESPONSE_RESET, GTK_RESPONSE_CANCEL, GTK_RESPONSE_OK, 0);
dataview = gwy_create_preview(gui.data, 0, PREVIEW_SIZE, FALSE);
hbox = gwy_create_dialog_preview_hbox(GTK_DIALOG(dialog), GWY_DATA_VIEW(dataview), FALSE);
table = gui.table = gwy_param_table_new(args->params);
gwy_param_table_append_radio_header(table, PARAM_DISTRIBUTION);
gwy_param_table_append_radio_item(table, PARAM_DISTRIBUTION, COERCE_DISTRIBUTION_UNIFORM);
gwy_param_table_append_radio_item(table, PARAM_DISTRIBUTION, COERCE_DISTRIBUTION_GAUSSIAN);
gwy_param_table_append_radio_item(table, PARAM_DISTRIBUTION, COERCE_DISTRIBUTION_SKEW_NORMAL);
gwy_param_table_append_slider(table, PARAM_SKEW);
gwy_param_table_slider_set_mapping(table, PARAM_SKEW, GWY_SCALE_MAPPING_LINEAR);
gwy_param_table_slider_set_steps(table, PARAM_SKEW, 0.001, 0.1);
gwy_param_table_append_radio_item(table, PARAM_DISTRIBUTION, COERCE_DISTRIBUTION_DATA);
gwy_param_table_append_image_id(table, PARAM_TEMPLATE);
gwy_param_table_data_id_set_filter(table, PARAM_TEMPLATE, template_filter, args->field, NULL);
gwy_param_table_append_radio_item(table, PARAM_DISTRIBUTION, COERCE_DISTRIBUTION_LEVELS);
gwy_param_table_append_combo(table, PARAM_LEVEL_TYPE);
gwy_param_table_append_slider(table, PARAM_NLEVELS);
gwy_param_table_append_header(table, -1, _("Options"));
gwy_param_table_append_radio(table, PARAM_PROCESSING);
gwy_param_table_append_checkbox(table, PARAM_UPDATE);
gtk_box_pack_start(GTK_BOX(hbox), gwy_param_table_widget(table), TRUE, TRUE, 0);
gwy_dialog_add_param_table(dialog, table);
g_signal_connect_swapped(table, "param-changed", G_CALLBACK(param_changed), &gui);
gwy_dialog_set_preview_func(dialog, GWY_PREVIEW_IMMEDIATE, preview, &gui, NULL);
outcome = gwy_dialog_run(dialog);
g_object_unref(gui.data);
return outcome;
}
static void
param_changed(ModuleGUI *gui, gint id)
{
GwyParamTable *table = gui->table;
GwyParams *params = gui->args->params;
CoerceDistributionType distribution = gwy_params_get_enum(params, PARAM_DISTRIBUTION);
gboolean has_template = !gwy_params_data_id_is_none(params, PARAM_TEMPLATE);
if (id < 0 || id == PARAM_TEMPLATE)
gwy_param_table_radio_set_sensitive(table, PARAM_DISTRIBUTION, COERCE_DISTRIBUTION_DATA, has_template);
if (id < 0 || id == PARAM_DISTRIBUTION) {
gwy_param_table_set_sensitive(table, PARAM_TEMPLATE, (distribution == COERCE_DISTRIBUTION_DATA));
gwy_param_table_set_sensitive(table, PARAM_LEVEL_TYPE, (distribution == COERCE_DISTRIBUTION_LEVELS));
gwy_param_table_set_sensitive(table, PARAM_NLEVELS, (distribution == COERCE_DISTRIBUTION_LEVELS));
gwy_param_table_set_sensitive(table, PARAM_SKEW, (distribution == COERCE_DISTRIBUTION_SKEW_NORMAL));
}
if (id != PARAM_UPDATE)
gwy_dialog_invalidate(GWY_DIALOG(gui->dialog));
}
static gboolean
template_filter(GwyContainer *data, gint id, gpointer user_data)
{
GwyDataField *template, *field = (GwyDataField*)user_data;
if (!gwy_container_gis_object(data, gwy_app_get_data_key_for_id(id), &template))
return FALSE;
if (template == field)
return FALSE;
return !gwy_data_field_check_compatibility(field, template, GWY_DATA_COMPATIBILITY_VALUE);
}
static void
preview(gpointer user_data)
{
ModuleGUI *gui = (ModuleGUI*)user_data;
execute(gui->args);
gwy_data_field_data_changed(gui->args->result);
gwy_dialog_have_result(GWY_DIALOG(gui->dialog));
}
static void
execute(ModuleArgs *args)
{
CoerceProcessingType processing = gwy_params_get_enum(args->params, PARAM_PROCESSING);
if (processing == COERCE_PROCESSING_FIELD)
coerce_do_field(args->field, args->result, args->params);
else if (processing == COERCE_PROCESSING_ROWS)
coerce_do_rows(args->field, args->result, args->params);
else {
g_assert_not_reached();
}
}
static void
coerce_do_field(GwyDataField *field, GwyDataField *result,
GwyParams *params)
{
guint n = gwy_data_field_get_xres(field)*gwy_data_field_get_yres(field);
const gdouble *d = gwy_data_field_get_data_const(field);
CoerceDistributionType distribution = gwy_params_get_enum(params, PARAM_DISTRIBUTION);
CoerceLevelsType level_type = gwy_params_get_enum(params, PARAM_LEVEL_TYPE);
ValuePos *vpos;
gdouble *z, *dr;
guint k;
if (distribution == COERCE_DISTRIBUTION_LEVELS && level_type == COERCE_LEVELS_UNIFORM) {
coerce_do_field_levels(field, result, params);
return;
}
vpos = g_new(ValuePos, n);
z = g_new(gdouble, n);
for (k = 0; k < n; k++) {
vpos[k].z = d[k];
vpos[k].k = k;
}
qsort(vpos, n, sizeof(ValuePos), gwy_compare_double);
if (distribution == COERCE_DISTRIBUTION_DATA) {
GwyDataField *src = gwy_params_get_image(params, PARAM_TEMPLATE);
guint nsrc = gwy_data_field_get_xres(src)*gwy_data_field_get_yres(src);
build_values_from_data(z, n, gwy_data_field_get_data_const(src), nsrc);
}
else if (distribution == COERCE_DISTRIBUTION_LEVELS) {
build_values_levels(vpos, z, n, gwy_params_get_int(params, PARAM_NLEVELS));
}
else if (distribution == COERCE_DISTRIBUTION_UNIFORM) {
gdouble min, max;
gwy_data_field_get_min_max(field, &min, &max);
build_values_uniform(z, n, min, max);
}
else if (distribution == COERCE_DISTRIBUTION_GAUSSIAN) {
gdouble avg, rms;
avg = gwy_data_field_get_avg(field);
rms = gwy_data_field_get_rms(field);
build_values_gaussian(z, n, avg, rms);
}
else if (distribution == COERCE_DISTRIBUTION_SKEW_NORMAL) {
gdouble avg, rms;
avg = gwy_data_field_get_avg(field);
rms = gwy_data_field_get_rms(field);
build_values_skew_normal(z, n, avg, rms, gwy_params_get_double(params, PARAM_SKEW));
}
else {
g_return_if_reached();
}
dr = gwy_data_field_get_data(result);
for (k = 0; k < n; k++)
dr[vpos[k].k] = z[k];
g_free(z);
g_free(vpos);
}
static void
coerce_do_field_levels(GwyDataField *field, GwyDataField *result,
GwyParams *params)
{
guint n = gwy_data_field_get_xres(field)*gwy_data_field_get_yres(field);
const gdouble *d = gwy_data_field_get_data_const(field);
gdouble *dr = gwy_data_field_get_data(result);
gdouble min, max, q;
gint k, nlevels = gwy_params_get_int(params, PARAM_NLEVELS);
gwy_data_field_get_min_max(field, &min, &max);
if (max <= min) {
gwy_data_field_fill(result, 0.5*(min + max));
return;
}
q = (max - min)/nlevels;
#ifdef _OPENMP
#pragma omp parallel for if (gwy_threads_are_enabled()) default(none) \
private(k) \
shared(d,dr,n,nlevels,q,min)
#endif
for (k = 0; k < n; k++) {
gint v = (gint)floor((d[k] - min)/q);
v = CLAMP(v, 0, nlevels-1);
dr[k] = (v + 0.5)*q + min;
}
}
static void
coerce_do_rows(GwyDataField *field, GwyDataField *result,
GwyParams *params)
{
guint xres = gwy_data_field_get_xres(field),
yres = gwy_data_field_get_yres(field);
const gdouble *d = gwy_data_field_get_data_const(field);
CoerceDistributionType distribution = gwy_params_get_enum(params, PARAM_DISTRIBUTION);
ValuePos *vpos;
gdouble *z, *dr;
guint i, j;
/* It is not completely clear what we should do in the case of row-wise processing but this at least ensures that
* the levels are the same in the entire field but individual rows are transformed individualy. */
if (distribution == COERCE_DISTRIBUTION_LEVELS) {
GwyDataField *tmp = gwy_data_field_duplicate(field);
gdouble min, max;
gwy_data_field_get_min_max(field, &min, &max);
for (i = 0; i < yres; i++)
gwy_data_field_area_renormalize(tmp, 0, i, xres, 1, max-min, min);
coerce_do_field(tmp, result, params);
g_object_unref(tmp);
return;
}
vpos = g_new(ValuePos, xres);
z = g_new(gdouble, xres);
if (distribution == COERCE_DISTRIBUTION_DATA) {
GwyDataField *src = gwy_params_get_image(params, PARAM_TEMPLATE);
guint nsrc = gwy_data_field_get_xres(src)*gwy_data_field_get_yres(src);
build_values_from_data(z, xres, gwy_data_field_get_data_const(src), nsrc);
}
else if (distribution == COERCE_DISTRIBUTION_UNIFORM) {
gdouble min, max;
gwy_data_field_get_min_max(field, &min, &max);
build_values_uniform(z, xres, min, max);
}
else if (distribution == COERCE_DISTRIBUTION_GAUSSIAN) {
gdouble avg, rms;
avg = gwy_data_field_get_avg(field);
rms = gwy_data_field_get_rms(field);
build_values_gaussian(z, xres, avg, rms);
}
else if (distribution == COERCE_DISTRIBUTION_SKEW_NORMAL) {
gdouble avg, rms;
avg = gwy_data_field_get_avg(field);
rms = gwy_data_field_get_rms(field);
build_values_skew_normal(z, xres, avg, rms, gwy_params_get_double(params, PARAM_SKEW));
}
else {
g_return_if_reached();
}
dr = gwy_data_field_get_data(result);
for (i = 0; i < yres; i++) {
for (j = 0; j < xres; j++) {
vpos[j].z = d[i*xres + j];
vpos[j].k = j;
}
qsort(vpos, xres, sizeof(ValuePos), gwy_compare_double);
for (j = 0; j < xres; j++)
dr[i*xres + vpos[j].k] = z[j];
}
g_free(z);
g_free(vpos);
}
static void
build_values_levels(const ValuePos *vpos, gdouble *z, guint n, guint nlevels)
{
guint i, j, blockstart, counter;
gdouble v;
if (nlevels >= n) {
for (i = 0; i < n; i++)
z[i] = vpos[i].z;
return;
}
blockstart = 0;
counter = nlevels/2;
for (i = 0; i < n; i++) {
counter += nlevels;
if (counter >= n) {
v = 0.0;
for (j = blockstart; j <= i; j++)
v += vpos[j].z;
v /= (i+1 - blockstart);
for (j = blockstart; j <= i; j++)
z[j] = v;
counter -= n;
blockstart = i+1;
}
}
}
static void
build_values_uniform(gdouble *z, guint n, gdouble min, gdouble max)
{
gdouble x;
guint i;
for (i = 0; i < n; i++) {
x = i/(n - 1.0);
z[i] = min + x*(max - min);
}
}
static gdouble
gwy_inverf(gdouble y)
{
/* Coefficients in rational approximations. */
static const gdouble a[4] = {
0.886226899, -1.645349621, 0.914624893, -0.140543331
};
static const gdouble b[4] = {
-2.118377725, 1.442710462, -0.329097515, 0.012229801
};
static const gdouble c[4] = {
-1.970840454, -1.624906493, 3.429567803, 1.641345311
};
static const gdouble d[2] = {
3.543889200, 1.637067800
};
const gdouble y0 = 0.7;
gdouble x, z;
if (y <= -1.0)
return -G_MAXDOUBLE;
if (y >= 1.0)
return G_MAXDOUBLE;
if (y < -y0) {
z = sqrt(-log(0.5*(1.0 + y)));
x = -(((c[3]*z + c[2])*z + c[1])*z + c[0])/((d[1]*z + d[0])*z + 1.0);
}
else if (y > y0) {
z = sqrt(-log(0.5*(1.0 - y)));
x = (((c[3]*z + c[2])*z + c[1])*z + c[0])/((d[1]*z + d[0])*z + 1.0);
}
else {
z = y*y;
x = y*(((a[3]*z + a[2])*z + a[1])*z + a[0])/((((b[3]*z + b[3])*z + b[1])*z + b[0])*z + 1.0);
}
/* Three steps of Newton method correction to full accuracy. */
x -= (erf(x) - y)/(2.0/GWY_SQRT_PI*exp(-x*x));
x -= (erf(x) - y)/(2.0/GWY_SQRT_PI*exp(-x*x));
x -= (erf(x) - y)/(2.0/GWY_SQRT_PI*exp(-x*x));
return x;
}
static void
build_values_gaussian(gdouble *z, guint n, gdouble mean, gdouble rms)
{
gdouble x;
guint i;
rms *= sqrt(2.0);
#ifdef _OPENMP
#pragma omp parallel for if (gwy_threads_are_enabled()) default(none) \
private(i,x) \
shared(z,n,mean,rms)
#endif
for (i = 0; i < n; i++) {
x = (2.0*i + 1.0)/n - 1.0;
z[i] = mean + rms*gwy_inverf(x);
}
}
static void
build_values_from_data(gdouble *z, guint n, const gdouble *data, guint ndata)
{
gdouble *sorted;
guint i;
if (n == ndata) {
gwy_assign(z, data, n);
gwy_math_sort(n, z);
return;
}
if (ndata < 2) {
for (i = 0; i < n; i++)
z[i] = data[0];
return;
}
sorted = g_memdup(data, ndata*sizeof(gdouble));
gwy_math_sort(ndata, sorted);
if (n < 3) {
if (n == 1)
z[0] = sorted[ndata/2];
else if (n == 2) {
z[0] = sorted[0];
z[1] = sorted[ndata-1];
}
g_free(sorted);
return;
}
for (i = 0; i < n; i++) {
gdouble x = (ndata - 1.0)*i/(n - 1.0);
gint j = (gint)floor(x);
if (G_UNLIKELY(j >= ndata-1)) {
j = ndata-2;
x = 1.0;
}
else
x -= j;
z[i] = sorted[j]*(1.0 - x) + sorted[j+1]*x;
}
g_free(sorted);
}
static void
build_values_from_pdf(gdouble *z, guint n, gdouble a, gdouble b, gdouble *pdf, guint npdf)
{
gdouble s, h, y, xi;
guint i, j;
/* Transform pdf to normalised cumulative distribution function. */
pdf[0] = 0.0; /* We cannot sample to the left anyway. */
for (i = 1; i < npdf; i++)
pdf[i] += pdf[i-1];
s = pdf[npdf-1];
for (i = 0; i < npdf; i++)
pdf[i] /= s;
/* Create values by linearly sampling the CDF bins. */
h = (b - a)/(npdf - 1.0);
j = 0;
for (i = 0; i < n; i++) {
y = (i + 0.5)/n;
while (j < npdf && y > pdf[j])
j++;
if (G_UNLIKELY(j == 0)) {
z[i] = a;
continue;
}
if (G_UNLIKELY(j == npdf)) {
z[i] = b;
continue;
}
/* Now we have j-1..j interval in which to interpolate. */
xi = (y - pdf[j-1])/(pdf[j] - pdf[j-1]);
z[i] = a + h*(j + xi - 1.0);
}
}
static gdouble
solve_alpha_for_skew(gdouble skew)
{
gdouble a = (4.0 - G_PI)/2.0;
gdouble a3 = cbrt(a);
gdouble s3 = cbrt(skew);
gdouble u = (a*a3*s3*s3 - a3*a3*skew*s3 + skew*skew)/(a*a + skew*skew);
gdouble alpha = sqrt(0.5*G_PI*u/(2.0 - G_PI*u));
return alpha;
}
static void
build_values_skew_normal(gdouble *z, guint n,
gdouble mean, gdouble rms, gdouble skew)
{
guint i, npdf = 2*n;
gdouble *pdf = g_new(gdouble, npdf);
gdouble x, s, m, alpha;
if (fabs(skew) > 0.995)
alpha = 100.0;
else
alpha = solve_alpha_for_skew(skew);
if (skew < 0.0)
alpha = -alpha;
s = 0.0;
#ifdef _OPENMP
#pragma omp parallel for if (gwy_threads_are_enabled()) default(none) \
reduction(+:s) \
private(i,x) \
shared(pdf,npdf,alpha)
#endif
for (i = 0; i < npdf; i++) {
x = 20.0*i/(npdf - 1.0) - 10.0;
pdf[i] = exp(-0.5*x*x) * (erf(alpha*x) + 1.0);
s += pdf[i];
}
/* Ensure given mean and rms: This is actually generic and we assume
* interval [-1,1]. */
m = 0.0;
for (i = 0; i < npdf; i++) {
x = 2.0*i/(npdf - 1.0) - 1.0;
pdf[i] /= s;
m += x*pdf[i];
}
s = 0.0;
for (i = 0; i < npdf; i++) {
x = 2.0*i/(npdf - 1.0) - 1.0 - m;
s += x*x*pdf[i];
}
s = sqrt(s);
build_values_from_pdf(z, n, -(1.0 + m)/s*rms + mean, (1.0 - m)/s*rms + mean, pdf, npdf);
g_free(pdf);
}
static void
sanitise_params(ModuleArgs *args)
{
GwyParams *params = args->params;
CoerceDistributionType distribution = gwy_params_get_enum(params, PARAM_DISTRIBUTION);
GwyAppDataId template = gwy_params_get_data_id(params, PARAM_TEMPLATE);
gboolean is_none = gwy_params_data_id_is_none(params, PARAM_TEMPLATE);
if (distribution == COERCE_DISTRIBUTION_DATA
&& (is_none || !template_filter(gwy_app_data_browser_get(template.datano), template.id, args->field)))
gwy_params_reset(params, PARAM_DISTRIBUTION);
}
/* vim: set cin columns=120 tw=118 et ts=4 sw=4 cino=>1s,e0,n0,f0,{0,}0,^0,\:1s,=0,g1s,h0,t0,+1s,c3,(0,u0 : */
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