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<html>
  <head>
    <title>
      Advanced Topics in HDF5 
    </title>

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  </head>


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  * Copyright by The HDF Group.                                               *
  * Copyright by the Board of Trustees of the University of Illinois.         *
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<hr>
<center>
<table border="0" width="98%">
<tr><td valign="top" align="left">
    <a href="index.html">HDF5 documents and links</a>&nbsp;<br />
    <a href="H5.intro.html">Introduction to HDF5</a>&nbsp;<br />
    <!--
    <a href="Glossary.html">Glossary</a><br />
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    <a href="UG/index.html">HDF5 User's Guide</a>&nbsp;<br />
    <a href="RM/RM_H5Front.html">HDF5 Reference Manual</a>&nbsp;<br />
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<!-- #EndLibraryItem --><div align="center">
<h1>Advanced Topics in HDF5</h1>
</div>


<div align="center">
<table border="0" width="80%">


      <!--                              -->
      <!-- OF INTEREST TO GENERAL USERS -->
      <!--                              -->

      <tr><td colspan="3">
          <hr color="green" size="3"/>
          The following topics are broadly applicable in HDF5 applications.
          <hr color="green" size="1"/>
          </td></tr>

      <tr><td valign="top"><a href="Advanced/Chunking/index.html">Chunking in HDF5</a>
        </td><td>&nbsp;&nbsp;&nbsp;
        </td><td valign="top">Provides background and guidance to assist in
          structuring and tuning the use of chunking.
        </td></tr>

      <tr><td colspan="3">&nbsp;</td></tr>

      <tr><td valign="top">
        <a href="Advanced/DirectChunkWrite/UsingDirectChunkWrite.pdf">
        Using the Direct</a>
          <br />&nbsp;&nbsp;&nbsp;
        <a href="Advanced/DirectChunkWrite/UsingDirectChunkWrite.pdf">
        Chunk Write</a>
          <br />&nbsp;&nbsp;&nbsp;
        <a href="Advanced/DirectChunkWrite/UsingDirectChunkWrite.pdf">
        Function</a>
        </td><td>&nbsp;&nbsp;&nbsp;
        </td><td valign="top">
        Describes another way that chunks can be written to datasets.
        <br />
        <i>(PDF only)</i>
        </td></tr>

      <tr><td colspan="3">&nbsp;</td></tr>

      <tr><td valign="top">
        <a href="Advanced/CommittedDatatypeCopying/CopyingCommittedDatatypesWithH5Ocopy.pdf">
        Copying Committed</a>
          <br />&nbsp;&nbsp;&nbsp;
        <a href="Advanced/CommittedDatatypeCopying/CopyingCommittedDatatypesWithH5Ocopy.pdf">
        Datatypes with</a>
          <br />&nbsp;&nbsp;&nbsp;
        <a href="Advanced/CommittedDatatypeCopying/CopyingCommittedDatatypesWithH5Ocopy.pdf">
        H5Ocopy</a>
        </td><td>&nbsp;&nbsp;&nbsp;
        </td><td valign="top">
        Describes how to copy to another file a dataset that uses a committed 
        datatype or an object with an attribute that uses a committed datatype 
        so that the committed datatype in the destination file can be used by 
        multiple objects.
        <br />
        <i>(PDF only)</i>
        </td></tr>

      <tr><td colspan="3">&nbsp;</td></tr>

      <tr><td valign="top"><a href="Advanced/UsingIdentifiers/index.html">Using
        Identifiers</a>
        </td><td>&nbsp;&nbsp;&nbsp;
        </td><td valign="top">Describes how HDF5 identifiers behave and 
          how they should be treated. 
        </td></tr>

      <tr><td colspan="3">&nbsp;</td></tr>
<!--

      <tr><td valign="top" colspan="3">
          <a href="Advanced/UsingUnicode/index.html">Using
          UTF-8 Encoding in HDF5 Applications</a>
        </td></tr>
        <tr>
        <td>&nbsp;&nbsp;&nbsp;</td>
        <td valign="top" colspan="2">Describes the use of UTF-8 Unicode character
          encodings in HDF5 applications.
        </td></tr>

      <tr><td colspan="3">&nbsp;</td></tr>
-->

      <tr><td valign="top"><a href="Advanced/UsingUnicode/index.html">Using
          UTF-8 </a>
          <br />&nbsp;&nbsp;&nbsp;
          <a href="Advanced/UsingUnicode/index.html">Encoding in</a>
          <br />&nbsp;&nbsp;&nbsp;
          <a href="Advanced/UsingUnicode/index.html">HDF5 Applications</a>
        </td><td>&nbsp;&nbsp;&nbsp;
        </td><td valign="top">Describes the use of UTF-8 Unicode character
          encodings in HDF5 applications.
        </td></tr>

      <tr><td colspan="3">&nbsp;</td></tr>

      <tr><td valign="top"><a href="Advanced/HDF5_Metadata/index.html">HDF5 
              Metadata</a>
        </td><td></td><td valign="top">Provides a comprehensive overview of
          the types of metadata used in HDF5.
        </td></tr>

      <tr><td colspan="3">&nbsp;</td></tr>

      <tr><td valign="top">
      <a href="Advanced/DynamicallyLoadedFilters/HDF5DynamicallyLoadedFilters.pdf">
      HDF5 Dynamically</a>
          <br />&nbsp;&nbsp;&nbsp;
          <a href="Advanced/DynamicallyLoadedFilters/HDF5DynamicallyLoadedFilters.pdf">
          Loaded Filters</a>
        </td><td></td><td valign="top">
          Describes how an HDF5 application can apply a filter that is not 
          registered with the HDF5 Library.
          <br />
          <i>(PDF only)</i>
        </td></tr>

      <tr><td colspan="3">&nbsp;</td></tr>


      <!--                      -->
      <!-- MORE ESOTERIC TOPICS -->
      <!--                      -->

      <tr><td valign="top">
          <a href="Advanced/DataFlow_H5Dread/DataFlow_H5Dread.pdf">HDF5 
          Data Flow</a>
          <br />&nbsp;&nbsp;&nbsp;<a href="Advanced/DataFlow_H5Dread/DataFlow_H5Dread.pdf">Pipeline&nbsp;for&nbsp;H5Dread</a>
        </td><td>&nbsp;&nbsp;&nbsp;
        </td><td valign="top">Describes data flow when reading raw data 
          from an HDF5 dataset.
          <br />
          <i>(PDF only)</i>
        </td></tr>

      <tr><td colspan="3">&nbsp;</td></tr>


      <!--                      -->
      <!-- MOST ESOTERIC TOPICS -->
      <!--                      -->

      <tr><td colspan="3">
          <hr color="green" size="3"/>
          The following topics are of interest in certain limited 
          situations such as when space utilization or performance must 
          be carefully tuned.
          <hr color="green" size="1"/>
          </td></tr>

      <tr><td valign="top"><a href="Advanced/MetadataCache/index.html">Metadata 
              Caching</a>
          <br />&nbsp;&nbsp;&nbsp;
          <a href="Advanced/MetadataCache/index.html">in HDF5</a>
        </td><td></td><td valign="top">Provides detailed information for
          managing and tuning HDF5 metadata caching.
        </td></tr>

      <tr><td colspan="3">&nbsp;</td></tr>

      <tr><td valign="top">
      <a href="Advanced/FileImageOperations/HDF5FileImageOperations.pdf">
      HDF5 File Image </a>
          <br />&nbsp;&nbsp;&nbsp;
          <a href="Advanced/FileImageOperations/HDF5FileImageOperations.pdf">
          Operations</a>
        </td><td></td><td valign="top">
          Describes how to work with HDF5 files in memory. Disk I/O is not 
          required when file images are opened, created, read from, or 
          written to. 
          <br />
          <i>(PDF only)</i>
        </td></tr>

      <tr><td colspan="3">&nbsp;</td></tr>

      <tr><td valign="top">
      <a href="Advanced/ModifiedRegionWrites/ModifiedRegionWrites.pdf">
      Modified Region </a>
        <br />&nbsp;&nbsp;&nbsp;
        <a href="Advanced/ModifiedRegionWrites/ModifiedRegionWrites.pdf">
        Writes</a>
        </td><td></td><td valign="top">
        Describes how to set write operations for in-memory files so that 
        only modified regions are written to storage. Available when 
        the Core (Memory) VFD is used. 
        <br />
        <i>(PDF only)</i>
        </td></tr>

      <tr><td colspan="3">&nbsp;</td></tr>

      <tr><td valign="top">
      <a href="Advanced/FreeingMemory/FreeingMemoryAllocatedByTheHdf5Library.pdf">
      Freeing Memory </a>
          <br />&nbsp;&nbsp;&nbsp;
          <a href="Advanced/FreeingMemory/FreeingMemoryAllocatedByTheHdf5Library.pdf">
          Allocated by the </a>
          <br />&nbsp;&nbsp;&nbsp;
          <a href="Advanced/FreeingMemory/FreeingMemoryAllocatedByTheHdf5Library.pdf">
          HDF5 Library</a>
        </td><td></td><td valign="top">
          Describes how inconsistent memory management can cause heap 
          corruption or resource leaks and possible solutions.
          <br />
          <i>(PDF only)</i>
        </td></tr>

      <tr><td colspan="3">&nbsp;</td></tr>

      <tr><td valign="top">
      <a href="Advanced/PHDF5FileConsistencySemantics/PHDF5FileConsistencySemantics.pdf">
      Enabling a Strict</a>
          <br />&nbsp;&nbsp;&nbsp;
          <a href="Advanced/PHDF5FileConsistencySemantics/PHDF5FileConsistencySemantics.pdf">
          Consistency </a>
          <br />&nbsp;&nbsp;&nbsp;
          <a href="Advanced/PHDF5FileConsistencySemantics/PHDF5FileConsistencySemantics.pdf">
          Semantics Model</a>
          <br />&nbsp;&nbsp;&nbsp;
          <a href="Advanced/PHDF5FileConsistencySemantics/PHDF5FileConsistencySemantics.pdf">
          in Parallel HDF5</a>
        </td><td></td><td valign="top">
          Describes how to improve file access consistency semantics with the 
          Parallel HDF5 Library. 
          <br />
          <i>(PDF only)</i>
        </td></tr>

      <tr><td colspan="3">&nbsp;
          <hr color="green" size="3"/>
        </td></tr>




<!-- TEMPLATE
      <tr><td valign="top"><a href="Advanced/SUBDIR">TitleLine1</a>
          <br />&nbsp;&nbsp;&nbsp;
          <a href="Advanced/SUBDIR">TitleLine2</a>
        </td><td></td><td valign="top">DESCRIPTION
        </td></tr>

      <tr><td colspan="3">&nbsp;</td></tr>
-->




</table>
</div>



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<hr>
<center>
<table border="0" width="98%">
<tr><td valign="top" align="left">
    <a href="index.html">HDF5 documents and links</a>&nbsp;<br />
    <a href="H5.intro.html">Introduction to HDF5</a>&nbsp;<br />
    <!--
    <a href="Glossary.html">Glossary</a><br />
    -->
</td>
<td valign="top" align="right">
    <a href="UG/index.html">HDF5 User's Guide</a>&nbsp;<br />
    <a href="RM/RM_H5Front.html">HDF5 Reference Manual</a>&nbsp;<br />
    <a href="ADGuide.html">HDF5 Application Developer's Guide</a>&nbsp;<br />
</td></tr>
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      <td align="left">
          <address>
          The HDF Group Help Desk: <img src="Graphics/help.png" align=top height=16>
          <br>
          Describes HDF5 Release 1.8.13, May 2014.
          </address>
      </td><td width="5%">&nbsp;</td>
      <td align="right">
          <a href="Copyright.html">Copyright</a> by
          <a href="http://www.hdfgroup.org">The HDF Group</a>
          <br>
          and the Board of Trustees of the University of Illinois
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Last modified:  23 April 2014


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