1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326 327 328 329 330 331 332 333 334 335 336 337 338 339 340 341 342 343 344 345 346 347 348 349 350 351 352 353 354 355 356 357 358 359 360 361 362 363 364 365 366 367 368 369 370 371 372 373 374 375 376 377 378 379 380 381 382 383 384 385 386 387 388 389 390 391 392 393 394 395 396 397 398 399 400 401 402 403 404 405 406 407 408 409 410 411 412 413 414 415 416 417 418 419 420 421 422 423 424 425 426 427 428 429 430 431 432 433 434 435 436 437 438 439 440 441 442 443 444 445 446 447 448 449 450 451 452 453 454 455 456 457 458 459 460 461 462 463 464 465 466 467 468 469 470 471 472 473 474 475 476 477 478 479 480 481 482 483 484 485 486 487 488 489 490 491 492 493 494 495 496 497 498 499 500 501 502 503 504 505 506 507 508 509 510 511 512 513 514 515 516 517 518 519 520 521 522 523 524 525 526 527 528 529 530 531 532 533 534 535 536 537 538 539 540 541 542 543 544 545 546 547 548 549 550 551 552 553 554 555 556 557 558 559 560 561 562 563 564 565 566 567 568 569 570 571 572 573 574 575 576 577 578 579 580 581 582 583 584 585 586 587 588 589 590 591 592 593 594 595 596 597 598 599 600 601 602 603 604 605 606 607 608 609 610 611 612 613 614 615 616 617 618 619 620 621 622 623 624 625 626 627 628 629 630 631 632 633 634 635 636 637 638 639 640 641 642 643 644 645 646 647 648 649 650 651 652 653 654 655 656 657 658 659 660 661 662 663 664 665 666 667 668 669 670 671 672 673 674 675 676 677 678 679 680 681 682 683 684 685 686 687 688 689 690 691 692 693 694 695 696 697 698 699 700 701 702 703 704 705 706 707 708 709 710 711 712 713 714 715 716 717 718 719 720 721 722 723 724 725 726 727 728 729 730 731 732 733 734 735 736 737 738 739 740 741 742 743 744 745 746 747 748 749 750 751 752 753 754 755 756 757 758 759 760 761 762 763 764 765 766 767 768 769 770 771 772 773 774 775 776 777 778 779 780 781 782 783 784 785 786 787 788 789 790 791 792 793 794 795 796 797 798 799 800 801 802 803 804 805 806 807 808 809 810 811 812 813 814 815 816 817 818 819 820 821 822 823 824 825 826 827 828 829 830 831 832 833 834 835 836 837 838 839 840 841 842 843 844 845 846 847 848 849 850 851 852 853 854 855 856 857 858 859 860 861 862 863 864 865 866 867 868 869 870 871 872 873 874 875 876 877 878 879 880 881 882 883 884 885 886 887 888 889 890 891 892 893 894 895 896 897 898 899 900 901 902 903 904 905 906 907 908 909 910 911 912 913 914 915 916 917 918 919 920 921 922 923 924 925 926 927 928 929 930 931 932 933 934 935 936 937 938 939 940 941 942 943 944 945 946 947 948 949 950 951 952 953 954 955 956 957 958 959 960 961 962 963 964 965 966 967 968 969 970 971 972 973 974 975 976 977 978 979 980 981 982 983 984 985 986 987 988 989 990 991 992 993 994 995 996 997 998 999 1000 1001 1002 1003 1004 1005 1006 1007 1008 1009 1010 1011 1012 1013 1014 1015 1016 1017 1018 1019 1020 1021 1022 1023 1024 1025 1026 1027 1028 1029 1030 1031 1032 1033 1034 1035 1036
|
<html xmlns:o="urn:schemas-microsoft-com:office:office"
xmlns:w="urn:schemas-microsoft-com:office:word"
xmlns:st1="urn:schemas-microsoft-com:office:smarttags"
xmlns="http://www.w3.org/TR/REC-html40">
<head>
<meta http-equiv=Content-Type content="text/html; charset=windows-1252">
<meta name=ProgId content=Word.Document>
<meta name=Generator content="Microsoft Word 10">
<meta name=Originator content="Microsoft Word 10">
<o:SmartTagType namespaceuri="urn:schemas-microsoft-com:office:smarttags"
name="date"/>
<!--[if gte mso 9]><xml>
<o:DocumentProperties>
<o:Author>slu</o:Author>
<o:Template>Normal</o:Template>
<o:LastAuthor>slu</o:LastAuthor>
<o:Revision>2</o:Revision>
<o:TotalTime>597</o:TotalTime>
<o:Created>2004-07-28T21:14:00Z</o:Created>
<o:LastSaved>2004-07-28T21:14:00Z</o:LastSaved>
<o:Pages>1</o:Pages>
<o:Words>1714</o:Words>
<o:Characters>9775</o:Characters>
<o:Company>NCSA</o:Company>
<o:Lines>81</o:Lines>
<o:Paragraphs>22</o:Paragraphs>
<o:CharactersWithSpaces>11467</o:CharactersWithSpaces>
<o:Version>10.2625</o:Version>
</o:DocumentProperties>
</xml><![endif]--><!--[if gte mso 9]><xml>
<w:WordDocument>
<w:SpellingState>Clean</w:SpellingState>
<w:GrammarState>Clean</w:GrammarState>
<w:Compatibility>
<w:UseFELayout/>
</w:Compatibility>
<w:BrowserLevel>MicrosoftInternetExplorer4</w:BrowserLevel>
</w:WordDocument>
</xml><![endif]--><!--[if !mso]><object
classid="clsid:38481807-CA0E-42D2-BF39-B33AF135CC4D" id=ieooui></object>
<style>
st1\:*{behavior:url(#ieooui) }
</style>
<![endif]-->
<style>
<!--
/* Font Definitions */
@font-face
{font-family:Wingdings;
panose-1:5 0 0 0 0 0 0 0 0 0;
mso-font-charset:2;
mso-generic-font-family:auto;
mso-font-pitch:variable;
mso-font-signature:0 268435456 0 0 -2147483648 0;}
@font-face
{font-family:SimSun;
panose-1:2 1 6 0 3 1 1 1 1 1;
mso-font-alt:\5B8B\4F53;
mso-font-charset:134;
mso-generic-font-family:auto;
mso-font-pitch:variable;
mso-font-signature:3 135135232 16 0 262145 0;}
@font-face
{font-family:"\@SimSun";
panose-1:2 1 6 0 3 1 1 1 1 1;
mso-font-charset:134;
mso-generic-font-family:auto;
mso-font-pitch:variable;
mso-font-signature:3 135135232 16 0 262145 0;}
/* Style Definitions */
p.MsoNormal, li.MsoNormal, div.MsoNormal
{mso-style-parent:"";
margin:0in;
margin-bottom:.0001pt;
mso-pagination:widow-orphan;
font-size:12.0pt;
font-family:"Times New Roman";
mso-fareast-font-family:SimSun;}
p.MsoDate, li.MsoDate, div.MsoDate
{mso-style-next:Normal;
margin:0in;
margin-bottom:.0001pt;
mso-pagination:widow-orphan;
font-size:12.0pt;
font-family:"Times New Roman";
mso-fareast-font-family:SimSun;}
a:link, span.MsoHyperlink
{color:blue;
text-decoration:underline;
text-underline:single;}
a:visited, span.MsoHyperlinkFollowed
{color:purple;
text-decoration:underline;
text-underline:single;}
p
{mso-margin-top-alt:auto;
margin-right:0in;
mso-margin-bottom-alt:auto;
margin-left:0in;
mso-pagination:widow-orphan;
font-size:12.0pt;
font-family:"Times New Roman";
mso-fareast-font-family:SimSun;}
code
{font-family:"Courier New";
mso-ascii-font-family:"Courier New";
mso-fareast-font-family:SimSun;
mso-hansi-font-family:"Courier New";
mso-bidi-font-family:"Courier New";}
span.SpellE
{mso-style-name:"";
mso-spl-e:yes;}
span.GramE
{mso-style-name:"";
mso-gram-e:yes;}
@page Section1
{size:8.5in 11.0in;
margin:1.0in 1.25in 1.0in 1.25in;
mso-header-margin:.5in;
mso-footer-margin:.5in;
mso-paper-source:0;}
div.Section1
{page:Section1;}
/* List Definitions */
@list l0
{mso-list-id:240533194;
mso-list-type:hybrid;
mso-list-template-ids:-1335209324 1284547292 67698689 67698715 67698703 67698713 67698715 67698703 67698713 67698715;}
@list l0:level1
{mso-level-number-format:roman-upper;
mso-level-tab-stop:.75in;
mso-level-number-position:left;
margin-left:.75in;
text-indent:-.5in;}
@list l0:level2
{mso-level-number-format:bullet;
mso-level-text:\F0B7;
mso-level-tab-stop:1.0in;
mso-level-number-position:left;
text-indent:-.25in;
font-family:Symbol;}
@list l0:level3
{mso-level-number-format:roman-lower;
mso-level-tab-stop:1.5in;
mso-level-number-position:right;
text-indent:-9.0pt;}
@list l1
{mso-list-id:1085297296;
mso-list-type:hybrid;
mso-list-template-ids:-244408772 2064827866 67698691 67698693 67698689 67698691 67698693 67698689 67698691 67698693;}
@list l1:level1
{mso-level-number-format:bullet;
mso-level-text:-;
mso-level-tab-stop:.5in;
mso-level-number-position:left;
text-indent:-.25in;
font-family:"Times New Roman";
mso-fareast-font-family:SimSun;}
ol
{margin-bottom:0in;}
ul
{margin-bottom:0in;}
-->
</style>
<!--[if gte mso 10]>
<style>
/* Style Definitions */
table.MsoNormalTable
{mso-style-name:"Table Normal";
mso-tstyle-rowband-size:0;
mso-tstyle-colband-size:0;
mso-style-noshow:yes;
mso-style-parent:"";
mso-padding-alt:0in 5.4pt 0in 5.4pt;
mso-para-margin:0in;
mso-para-margin-bottom:.0001pt;
mso-pagination:widow-orphan;
font-size:10.0pt;
font-family:"Times New Roman";}
</style>
<![endif]-->
</head>
<body lang=EN-US link=blue vlink=purple style='tab-interval:.5in'>
<div class=Section1>
<p class=MsoNormal><span style='mso-tab-count:2'> </span><b
style='mso-bidi-font-weight:normal'><span style='font-size:14.0pt'>Encode and
Decode HDF5 Objects<o:p></o:p></span></b></p>
<p class=MsoNormal><span style='mso-tab-count:3'> </span><b
style='mso-bidi-font-weight:normal'>Raymond Lu & <span class=SpellE>Quincey</span>
<span class=SpellE>Koziol</span><o:p></o:p></b></p>
<p class=MsoNormal><span style='mso-tab-count:3'> </span><st1:date
Month="7" Day="27" Year="2004">July 27, 2004</st1:date></p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal style='margin-left:.75in;text-indent:-.5in;mso-list:l0 level1 lfo1;
tab-stops:list .75in'><![if !supportLists]><b style='mso-bidi-font-weight:normal'><span
style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>I.<span
style='font:7.0pt "Times New Roman"'>
</span></span></span></b><![endif]><b style='mso-bidi-font-weight:normal'>Documents
Audience<o:p></o:p></b></p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal><span class=GramE>Current HDF5 library designers and
knowledgeable external developers.</span></p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal style='margin-left:.75in;text-indent:-.5in;mso-list:l0 level1 lfo1;
tab-stops:list .75in'><![if !supportLists]><b style='mso-bidi-font-weight:normal'><span
style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>II.<span
style='font:7.0pt "Times New Roman"'>
</span></span></span></b><![endif]><b style='mso-bidi-font-weight:normal'>Functionality<o:p></o:p></b></p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal>The functions described in this document encode and decode
the description of HDF5 objects given by their ID into a binary buffer.<span
style='mso-spacerun:yes'> </span>At this stage, these functions deal only with
datatype and dataspace objects.<span style='mso-spacerun:yes'> </span>In the
future, we may expand the coverage of the objects.</p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal style='margin-left:.75in;text-indent:-.5in;mso-list:l0 level1 lfo1;
tab-stops:list .75in'><![if !supportLists]><b style='mso-bidi-font-weight:normal'><span
style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>III.<span
style='font:7.0pt "Times New Roman"'>
</span></span></span></b><![endif]><b style='mso-bidi-font-weight:normal'>Motivations
and Use Cases<o:p></o:p></b></p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal>The motivation of these functions is to provide a way to
transmit object description between two tasks.<span style='mso-spacerun:yes'>
</span>The second task can reconstruct the object and return its ID.<span
style='mso-spacerun:yes'> </span>This can happen among different processes in
an MPI program.<span style='mso-spacerun:yes'> </span>Another useful case is
to do checksum on the object.<span style='mso-spacerun:yes'> </span></p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal>It is possible to allow users program to decode the binary
description of the object if there is need to do so.<span
style='mso-spacerun:yes'> </span>See below for a description of the encoding
of the objects.</p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal>Below are some use cases (borrowed from Robb Matzke),</p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal>1.<span style='mso-spacerun:yes'> </span>In a parallel
program (plain old PHDF5 and not FPHDF5) datasets must be created collectively
over the file communicator, but sometimes conceptually only one MPI task (call
it the "root" task) wants to create the object. Therefore the
non-root tasks need to jump into the <span class=GramE><span style='font-size:
10.0pt;font-family:"Courier New";mso-bidi-font-family:"Times New Roman"'>H5Dcreate(</span></span><span
style='font-size:10.0pt;font-family:"Courier New";mso-bidi-font-family:"Times New Roman"'>)</span>
call too, and they need to all supply various parameters including a datatype. <span
style='mso-spacerun:yes'></span>HDF5 <span class=SpellE>datatypes</span> have
such a rich expressive power that it would be easiest if HDF5 provided some way
to help the root task broadcast the datatype to the other tasks rather than the
programmer dissect the datatype, broadcast its description, then construct it
on the other tasks. That's where the encode/decode functions come in: the
encode takes a datatype and converts it into some task-independent
representation</p>
<p class=MsoNormal><span class=GramE>that</span> can be broadcast to the other
tasks, which then decode that representation back into an <span class=SpellE><i
style='mso-bidi-font-style:normal'>hid_t</i></span> handle to a datatype.</p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal>2.<span style='mso-spacerun:yes'> </span>This second use
case is similar in that one MPI task has a datatype that it would like to save
in a file. Normally <span class=GramE><span style='font-size:10.0pt;font-family:
"Courier New";mso-bidi-font-family:"Times New Roman"'>H5Tcommit(</span></span><span
style='font-size:10.0pt;font-family:"Courier New";mso-bidi-font-family:"Times New Roman"'>)</span>
is a file-collective operation. However, writing to an existing dataset is
independent, so a programmer could encode a datatype into the</p>
<p class=MsoNormal><span class=GramE>task-independent</span> representation and
independently write that into an existing dataset. Obviously in this situation
a reader program would have to know that the sequence of bytes is an encoded
datatype in order to do anything useful with it.</p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal>3.<span style='mso-spacerun:yes'> </span>In order to
compare whether two <span class=SpellE>datatypes</span> on different tasks are
equivalent you could byte-compare their task-independent encodings.</p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal>4.<span style='mso-spacerun:yes'> </span>If you have <i
style='mso-bidi-font-style:normal'>lots</i> of <span class=SpellE>datatypes</span>
to compare (e.g., sorting an array of <span class=SpellE>datatypes</span>) it
would probably be faster to encode them all first, then sort based on the
encoding since <span class=SpellE><span class=GramE><span style='font-size:
10.0pt;font-family:"Courier New";mso-bidi-font-family:"Times New Roman"'>memcmp</span></span></span><span
class=GramE><span style='font-size:10.0pt;font-family:"Courier New";mso-bidi-font-family:
"Times New Roman"'>(</span></span><span style='font-size:10.0pt;font-family:
"Courier New";mso-bidi-font-family:"Times New Roman"'>)</span> is almost certainly
faster than <span style='font-size:10.0pt;font-family:"Courier New";mso-bidi-font-family:
"Times New Roman"'>H5T_cmp().</span></p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal>5.<span style='mso-spacerun:yes'> </span>If you have <i
style='mso-bidi-font-style:normal'>lots</i> of <span class=SpellE>datatypes</span>
to save in a file and those types are distributed among MPI tasks then its
probably fastest to have each task encode its <span class=SpellE>datatypes</span>,
<span class=SpellE><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'>MPI_Gather</span></span><span
style='font-size:10.0pt;font-family:"Courier New";mso-bidi-font-family:"Times New Roman"'>()</span>
them to a single I/O task, then that task independently writes the encoded
types to a</p>
<p class=MsoNormal><span class=GramE>pre-existing</span> dataset.</p>
<p class=MsoNormal><span style='mso-spacerun:yes'></span></p>
<p class=MsoNormal style='margin-left:.75in;text-indent:-.5in;mso-list:l0 level1 lfo1;
tab-stops:list .75in'><![if !supportLists]><b style='mso-bidi-font-weight:normal'><span
style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>IV.<span
style='font:7.0pt "Times New Roman"'>
</span></span></span></b><![endif]><b style='mso-bidi-font-weight:normal'>Release<o:p></o:p></b></p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal>There functions are for release 1.8 of the library.<o:p></o:p></p>
<p class=MsoNormal><b style='mso-bidi-font-weight:normal'><o:p> </o:p></b></p>
<p class=MsoNormal style='margin-left:.75in;text-indent:-.5in;mso-list:l0 level1 lfo1;
tab-stops:list .75in'><![if !supportLists]><b style='mso-bidi-font-weight:normal'><span
style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>V.<span
style='font:7.0pt "Times New Roman"'>
</span></span></span></b><![endif]><b style='mso-bidi-font-weight:normal'>Algorithms
& Format of Data<o:p></o:p></b></p>
<p class=MsoNormal><b style='mso-bidi-font-weight:normal'><o:p> </o:p></b></p>
<p class=MsoNormal>For the internal library design, we are going to borrow the
algorithm of encoding and decoding object header messages.<span
style='mso-spacerun:yes'> </span>It will be helpful to take a look at the data
object part (Part IV) of the HDF5 File Format document.<span
style='mso-spacerun:yes'> </span>The data objects we are interested in here
are datatype and dataspace.<o:p></o:p></p>
<p class=MsoNormal><b style='mso-bidi-font-weight:normal'><o:p> </o:p></b></p>
<p class=MsoNormal>Format of the datatype information:</p>
<p class=MsoNormal><span style='mso-tab-count:1'> </span>The encoded
datatype is composed of the following information:</p>
<p class=MsoNormal style='margin-left:1.0in;text-indent:-.25in;mso-list:l0 level2 lfo1;
tab-stops:list 1.0in'><![if !supportLists]><span style='font-family:Symbol;
mso-fareast-font-family:Symbol;mso-bidi-font-family:Symbol'><span
style='mso-list:Ignore'><span style='font:7.0pt "Times New Roman"'>
</span></span></span><![endif]>A single byte indicating the buffer is a
datatype which is the same value (3) as the datatype message ID in object
headers in the file format.</p>
<p class=MsoNormal style='margin-left:1.0in;text-indent:-.25in;mso-list:l0 level2 lfo1;
tab-stops:list 1.0in'><![if !supportLists]><span style='font-family:Symbol;
mso-fareast-font-family:Symbol;mso-bidi-font-family:Symbol'><span
style='mso-list:Ignore'><span style='font:7.0pt "Times New Roman"'>
</span></span></span><![endif]>A single byte indicating the version of the
datatype information, currently set to 0.</p>
<p class=MsoNormal style='margin-left:1.0in;text-indent:-.25in;mso-list:l0 level2 lfo1;
tab-stops:list 1.0in'><![if !supportLists]><span style='font-family:Symbol;
mso-fareast-font-family:Symbol;mso-bidi-font-family:Symbol'><span
style='mso-list:Ignore'><span style='font:7.0pt "Times New Roman"'>
</span></span></span><![endif]>A sequence of bytes that have the same format as
the datatype message in the object header.<span style='mso-spacerun:yes'>
</span>See the HDF5 file format document for the exact format.</p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal>Format of the dataspace information:</p>
<p class=MsoNormal><span style='mso-tab-count:1'> </span>The encoded
dataspace is composed of the following information:</p>
<p class=MsoNormal style='margin-left:1.0in;text-indent:-.25in;mso-list:l0 level2 lfo1;
tab-stops:list 1.0in'><![if !supportLists]><span style='font-family:Symbol;
mso-fareast-font-family:Symbol;mso-bidi-font-family:Symbol'><span
style='mso-list:Ignore'><span style='font:7.0pt "Times New Roman"'>
</span></span></span><![endif]>A single byte indicating the buffer is a
dataspace which is the same value (1) as the dataspace message ID in object
headers in the file format.</p>
<p class=MsoNormal style='margin-left:1.0in;text-indent:-.25in;mso-list:l0 level2 lfo1;
tab-stops:list 1.0in'><![if !supportLists]><span style='font-family:Symbol;
mso-fareast-font-family:Symbol;mso-bidi-font-family:Symbol'><span
style='mso-list:Ignore'><span style='font:7.0pt "Times New Roman"'>
</span></span></span><![endif]>A single byte indicating the version of the
dataspace information, currently set to 0.</p>
<p class=MsoNormal style='margin-left:1.0in;text-indent:-.25in;mso-list:l0 level2 lfo1;
tab-stops:list 1.0in'><![if !supportLists]><span style='font-family:Symbol;
mso-fareast-font-family:Symbol;mso-bidi-font-family:Symbol'><span
style='mso-list:Ignore'><span style='font:7.0pt "Times New Roman"'>
</span></span></span><![endif]>A single indicating the size in bytes of the
size of lengths information for the rest of the information encoded in the
buffer.</p>
<p class=MsoNormal style='margin-left:1.0in;text-indent:-.25in;mso-list:l0 level2 lfo1;
tab-stops:list 1.0in'><![if !supportLists]><span style='font-family:Symbol;
mso-fareast-font-family:Symbol;mso-bidi-font-family:Symbol'><span
style='mso-list:Ignore'><span style='font:7.0pt "Times New Roman"'>
</span></span></span><![endif]>A 16-bit value indicating the size in bytes of
the dataspace extent information.</p>
<p class=MsoNormal style='margin-left:1.0in;text-indent:-.25in;mso-list:l0 level2 lfo1;
tab-stops:list 1.0in'><![if !supportLists]><span style='font-family:Symbol;
mso-fareast-font-family:Symbol;mso-bidi-font-family:Symbol'><span
style='mso-list:Ignore'><span style='font:7.0pt "Times New Roman"'>
</span></span></span><![endif]>A sequence of bytes that store the extent of the
dataspace and that have the same format as the dataspace message in the object
header.<span style='mso-spacerun:yes'> </span>See the HDF5 file format
document for the exact format.</p>
<p class=MsoNormal style='margin-left:1.0in;text-indent:-.25in;mso-list:l0 level2 lfo1;
tab-stops:list 1.0in'><![if !supportLists]><span style='font-family:Symbol;
mso-fareast-font-family:Symbol;mso-bidi-font-family:Symbol'><span
style='mso-list:Ignore'><span style='font:7.0pt "Times New Roman"'>
</span></span></span><![endif]>A sequence of bytes that store the selection
within the dataspace and that have the same format as the region portion of a
region reference.<span style='mso-spacerun:yes'> </span>See the HDF5 file
format document for the exact format.</p>
<p class=MsoNormal><b style='mso-bidi-font-weight:normal'><o:p> </o:p></b></p>
<p class=MsoNormal style='margin-left:.75in;text-indent:-.5in;mso-list:l0 level1 lfo1;
tab-stops:list .75in'><![if !supportLists]><b style='mso-bidi-font-weight:normal'><span
style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>VI.<span
style='font:7.0pt "Times New Roman"'>
</span></span></span></b><![endif]><b style='mso-bidi-font-weight:normal'>Examples<o:p></o:p></b></p>
<p class=MsoNormal><b style='mso-bidi-font-weight:normal'><o:p> </o:p></b></p>
<p class=MsoNormal>Here is an example for <span class=GramE><span
style='font-size:10.0pt;font-family:"Courier New";mso-bidi-font-family:"Times New Roman"'>H5Tencode(</span></span><span
style='font-size:10.0pt;font-family:"Courier New";mso-bidi-font-family:"Times New Roman"'>)</span>
and <span style='font-size:10.0pt;font-family:"Courier New";mso-bidi-font-family:
"Times New Roman"'>H5Tdecode()</span>.<span style='mso-spacerun:yes'>
</span>In this piece of code, it creates a compound datatype and encodes
it.<span style='mso-spacerun:yes'> </span>Then it decodes the buffer and
returns a new object ID.<span style='mso-spacerun:yes'> </span></p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=SpellE><span class=GramE>struct</span></span> s1 {<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=SpellE><span class=GramE>int</span></span><span
style='mso-spacerun:yes'> </span>a;<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=GramE>float<span style='mso-spacerun:yes'> </span>b</span>;<o:p></o:p></span></p>
<p class=MsoNormal style='text-indent:24.0pt'><span style='font-size:10.0pt;
font-family:"Courier New";mso-bidi-font-family:"Times New Roman"'>};<o:p></o:p></span></p>
<p class=MsoNormal style='text-indent:24.0pt'><span class=GramE><span
style='font-size:10.0pt;font-family:"Courier New";mso-bidi-font-family:"Times New Roman"'>hid</span></span><span
style='font-size:10.0pt;font-family:"Courier New";mso-bidi-font-family:"Times New Roman"'>
tid1, decoded_tid1;<o:p></o:p></span></p>
<p class=MsoNormal style='text-indent:24.0pt'><span style='font-size:10.0pt;
font-family:"Courier New";mso-bidi-font-family:"Times New Roman"'><span
style='mso-tab-count:2'> </span>:<o:p></o:p></span></p>
<p class=MsoNormal style='text-indent:24.0pt'><span style='font-size:10.0pt;
font-family:"Courier New";mso-bidi-font-family:"Times New Roman"'><o:p> </o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span>/* <span class=GramE>Create</span> a compound datatype */<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=GramE>if(</span>(tid1=H5Tcreate(H5T_COMPOUND, <span
class=SpellE>sizeof</span>(<span class=SpellE>struct</span> s1)))<0) <o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=SpellE><span class=GramE>goto</span></span> error;<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><o:p> </o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=GramE>if(</span>H5Tinsert(tid1, "a", HOFFSET(<span
class=SpellE>struct</span> s1, a), H5T_NATIVE_INT)<0)<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=SpellE><span class=GramE>goto</span></span> error;<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=GramE>if(</span>H5Tinsert(tid1, "b", HOFFSET(<span
class=SpellE>struct</span> s1, b), H5T_NATIVE_FLOAT)<0)<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=SpellE><span class=GramE>goto</span></span> error;<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><o:p> </o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span>/* <span class=GramE>Encode</span> compound type in a buffer */<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=GramE>if(</span>H5Tencode(tid1, NULL, &<span
class=SpellE>cmpd_buf_size</span>)<0)<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=SpellE><span class=GramE>goto</span></span> error;<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><o:p> </o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=GramE>if(</span><span class=SpellE>cmpd_buf_size</span>>0)<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=SpellE>cmpd_buf</span> = (unsigned char*<span class=GramE>)<span
class=SpellE>calloc</span></span>(1, <span class=SpellE>cmpd_buf_size</span>);<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><o:p> </o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=GramE>if(</span>H5Tencode(tid1, <span class=SpellE>cmpd_buf</span>,
&<span class=SpellE>cmpd_buf_size</span>)<0)<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=SpellE><span class=GramE>goto</span></span> error;<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><o:p> </o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span>/* <span class=GramE>Decode</span> from the compound buffer and return
an object handle */<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=GramE>if(</span>(decoded_tid1=H5Tdecode(<span class=SpellE>cmpd_buf</span>))<0)<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=SpellE><span class=GramE>goto</span></span> error;<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><o:p> </o:p></span></p>
<p class=MsoNormal>Below is an example for encoding and decoding a simple
dataspace using <span class=GramE><span style='font-size:10.0pt;font-family:
"Courier New";mso-bidi-font-family:"Times New Roman"'>H5Sencode(</span></span><span
style='font-size:10.0pt;font-family:"Courier New";mso-bidi-font-family:"Times New Roman"'>)</span>
and <span style='font-size:10.0pt;font-family:"Courier New";mso-bidi-font-family:
"Times New Roman"'>H5Sdecode()</span>.<span style='mso-spacerun:yes'>
</span>Notice that dataspace <span class=GramE>selection(</span><span
class=SpellE>hyperslab</span> in this case) can also be encoded and decoded.<o:p></o:p></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><o:p> </o:p></span></p>
<p class=MsoNormal style='text-indent:24.0pt'><span class=SpellE><span
style='font-size:10.0pt;font-family:"Courier New";mso-bidi-font-family:"Times New Roman"'>hid_t</span></span><span
style='font-size:10.0pt;font-family:"Courier New";mso-bidi-font-family:"Times New Roman"'><span
style='mso-tab-count:1'> </span>sid1, decoded_sid1;<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span style='mso-spacerun:yes'></span><span class=SpellE>hsize_t</span><span
style='mso-spacerun:yes'> </span><span class=GramE>dims1[</span>] =
{3, 15, 13};<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=SpellE><span class=GramE>hssize_t</span></span><span
style='mso-spacerun:yes'> </span>start[] = {0, 0, 0};<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=SpellE><span class=GramE>hsize_t</span></span><span
style='mso-spacerun:yes'> </span>stride[] = {2, 5, 3};<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=SpellE><span class=GramE>hsize_t</span></span><span
style='mso-spacerun:yes'> </span>count[] = {2, 2, 2};<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=SpellE><span class=GramE>hsize_t</span></span><span
style='mso-spacerun:yes'> </span>block[] = {1, 3, 1};<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><o:p> </o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span>/* <span class=GramE>Create</span> a simple data space of 3x15x13 */<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span>sid1 = H5Screate_<span class=GramE>simple(</span>SPACE1_RANK, dims1,
NULL);<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=GramE>CHECK(</span>sid1, FAIL,
"H5Screate_simple");<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-tab-count:1'> </span><o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span>/* Make a <span class=SpellE>hyperslab</span> selection */<o:p></o:p></span></p>
<p class=MsoNormal style='text-indent:24.0pt'><span class=GramE><span
style='font-size:10.0pt;font-family:"Courier New";mso-bidi-font-family:"Times New Roman"'>ret</span></span><span
style='font-size:10.0pt;font-family:"Courier New";mso-bidi-font-family:"Times New Roman"'>
= H5Sselect_hyperslab(sid1, H5S_SELECT_SET, start, stride,<o:p></o:p></span></p>
<p class=MsoNormal style='text-indent:24.0pt'><span style='font-size:10.0pt;
font-family:"Courier New";mso-bidi-font-family:"Times New Roman"'><span
style='mso-tab-count:2'> </span><span class=GramE>count</span>, block);<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=GramE>CHECK(</span>ret, FAIL,
"H5Sselect_hyperslab");<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><o:p> </o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span>/* Find out the size of buffer needed for encoding */<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=GramE>ret</span> = H5Sencode(sid1, NULL, &<span
class=SpellE>sbuf_size</span>);<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=GramE>CHECK(</span>ret, FAIL, "H5Sencode");<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><o:p> </o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=GramE>if(</span><span class=SpellE>sbuf_size</span>>0)<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=SpellE><span class=GramE>sbuf</span></span> = (unsigned
char*)<span class=SpellE>calloc</span>(1, <span class=SpellE>sbuf_size</span>);<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><o:p> </o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span>/* <span class=GramE>Encode</span> simple data space in a buffer */<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=GramE>ret</span> = H5Sencode(sid1, <span class=SpellE>sbuf</span>,
&<span class=SpellE>sbuf_size</span>);<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=GramE>CHECK(</span>ret, FAIL, "H5Sencode");<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><o:p> </o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span>/* <span class=GramE>Decode</span> from the dataspace buffer and return
an object handle */<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span>decoded_sid1=<span class=GramE>H5Sdecode(</span><span class=SpellE>sbuf</span>);<o:p></o:p></span></p>
<p class=MsoNormal><span style='font-size:10.0pt;font-family:"Courier New";
mso-bidi-font-family:"Times New Roman"'><span style='mso-spacerun:yes'>
</span><span class=GramE>CHECK(</span>decoded_sid1, FAIL, "H5Sdecode");<o:p></o:p></span></p>
<p class=MsoNormal><b style='mso-bidi-font-weight:normal'><o:p> </o:p></b></p>
<p class=MsoNormal style='margin-left:.75in;text-indent:-.5in;mso-list:l0 level1 lfo1;
tab-stops:list .75in'><![if !supportLists]><b style='mso-bidi-font-weight:normal'><span
style='mso-fareast-font-family:"Times New Roman"'><span style='mso-list:Ignore'>VII.<span
style='font:7.0pt "Times New Roman"'>
</span></span></span></b><![endif]><b style='mso-bidi-font-weight:normal'>API
Functions<o:p></o:p></b></p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal><strong>Name:</strong> <a name=Dataset-GetType>H5</a>Tencode</p>
<p class=MsoNormal><strong>Signature:</strong> </p>
<p class=MsoNormal style='margin-left:.5in'><span class=SpellE><em>herr_<span
class=GramE>t</span></em></span><span class=GramE><em><span
style='mso-spacerun:yes'> </span></em><code><span style='font-size:10.0pt'>H5Tencode</span></code></span>(<span
class=SpellE><em>hid_t</em></span><em> </em><span class=SpellE><code><span
style='font-size:10.0pt'>obj_id</span></code></span><code><span
style='font-size:10.0pt'>, </span></code><code><i style='mso-bidi-font-style:
normal'><span style='mso-ansi-font-size:12.0pt;mso-bidi-font-size:12.0pt;
font-family:"Times New Roman"'>unsigned char*</span></i></code><code><span
style='font-size:10.0pt'> <span class=SpellE>buf</span>, </span></code><span
class=SpellE><code><i style='mso-bidi-font-style:normal'><span
style='mso-ansi-font-size:12.0pt;mso-bidi-font-size:12.0pt;font-family:"Times New Roman"'>size_t</span></i></code></span><code><i
style='mso-bidi-font-style:normal'><span style='mso-ansi-font-size:12.0pt;
mso-bidi-font-size:12.0pt;font-family:"Times New Roman"'>*</span></i></code><code><span
style='font-size:10.0pt'> <span class=SpellE>nalloc</span></span></code>) </p>
<p class=MsoNormal><strong>Purpose:</strong> </p>
<p class=MsoNormal style='margin-left:.5in'>Encode a data type object
description into a binary buffer. </p>
<p class=MsoNormal><strong>Description:</strong> </p>
<p class=MsoNormal style='margin-left:.5in'>Given data type ID, <span
style='font-size:10.0pt;font-family:"Courier New"'>H5Tencode</span> converts a data
type description into binary form in a buffer.<span style='mso-spacerun:yes'>
</span>Using this binary form in the buffer, a data type object can be
reconstructed using <span style='font-size:10.0pt;font-family:"Courier New"'>H5Tdecode</span>
to return a new object <span class=GramE>handle(</span><span class=SpellE><i
style='mso-bidi-font-style:normal'>hid_t</i></span>) for this data type.</p>
<p class=MsoNormal style='margin-left:.5in'><o:p> </o:p></p>
<p class=MsoNormal style='margin-left:.5in'>A preliminary <code><span
style='font-size:10.0pt'>H5Tencode</span></code> call can be made to find out
the size of the buffer needed. This value is returned as <span class=SpellE><span
style='font-size:10.0pt;font-family:"Courier New"'>nalloc</span></span>.<span
style='mso-spacerun:yes'> </span>That value can then be assigned to <span
class=SpellE><code><span style='font-size:10.0pt'>nalloc</span></code></span>
for a second <code><span style='font-size:10.0pt'>H5Tencode</span></code> call,
which will retrieve the actual encoded object.<span style='mso-spacerun:yes'>
</span></p>
<p class=MsoNormal style='margin-left:.5in'><o:p> </o:p></p>
<p class=MsoNormal style='margin-left:.5in'>If the library finds out <span
class=SpellE><span style='font-size:10.0pt;font-family:"Courier New"'>nalloc</span></span>
is not big enough for the object, it simply returns the size of the buffer
needed through <span class=SpellE><span style='font-size:10.0pt;font-family:
"Courier New"'>nalloc</span></span> without encoding the provided buffer.<strong><span
style='font-weight:normal'><o:p></o:p></span></strong></p>
<p class=MsoNormal><strong>Parameters:</strong> </p>
<p class=MsoNormal><span class=SpellE><em>hid_t</em></span> <span class=SpellE><code><span
style='font-size:10.0pt'>obj_id</span></code></span> </p>
<p class=MsoNormal style='margin-left:.5in'>IN: Identifier of the object to be
encoded.</p>
<p class=MsoNormal><span class=GramE><em>unsigned</em></span><em> char*</em> <span
class=SpellE><code><span style='font-size:10.0pt'>buf</span></code></span> </p>
<p class=MsoNormal style='margin-left:.5in'>IN/OUT: Buffer for the object to be
encoded into.<span style='mso-spacerun:yes'> </span>If the provided buffer is
NULL, </p>
<p class=MsoNormal style='margin-left:.5in'><span class=GramE>only</span> the
size of buffer needed is returned through <span class=SpellE><span
style='font-size:10.0pt;font-family:"Courier New"'>nalloc</span></span>. </p>
<p class=MsoNormal><span class=SpellE><em>size_t</em></span><em>*</em> <span
class=SpellE><code><span style='font-size:10.0pt'>nalloc</span></code></span> </p>
<p class=MsoNormal style='margin-left:.5in'>IN: The size of the allocated
buffer.</p>
<p class=MsoNormal style='margin-left:.5in'>OUT: The size of the buffer needed.
</p>
<p class=MsoNormal><strong>Returns:</strong> </p>
<p class=MsoNormal style='margin-left:.5in'>Returns a non-negative value if
successful; otherwise returns a negative value.</p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal><strong>Name:</strong> H5Tdecode</p>
<p class=MsoNormal><strong>Signature:</strong> </p>
<p class=MsoNormal style='margin-left:.5in'><span class=SpellE><em>hid_<span
class=GramE>t</span></em></span><span class=GramE><em><span
style='mso-spacerun:yes'> </span></em><code><span style='font-size:10.0pt'>H5Tdecode</span></code></span>(<code><i
style='mso-bidi-font-style:normal'><span style='mso-ansi-font-size:12.0pt;
mso-bidi-font-size:12.0pt;font-family:"Times New Roman"'>unsigned char*</span></i></code><code><span
style='font-size:10.0pt'> <span class=SpellE>buf</span></span></code>) </p>
<p class=MsoNormal><strong>Purpose:</strong> </p>
<p class=MsoNormal style='margin-left:.5in'>Decode a binary object description of
data type and return a new object handle. </p>
<p class=MsoNormal><strong>Description:</strong> </p>
<p class=MsoNormal style='margin-left:.5in'>Given an object description of data
type in binary in a buffer, <span style='font-size:10.0pt;font-family:"Courier New"'>H5Tdecode</span>
reconstructs the HDF5 data type object and returns a new object handle for
it.<span style='mso-spacerun:yes'> </span>The binary description of the object
is encoded by <span style='font-size:10.0pt;font-family:"Courier New"'>H5Tencode</span>.<span
style='mso-spacerun:yes'> </span>User is responsible for passing in the right
buffer.</p>
<p class=MsoNormal><strong>Parameters:</strong> </p>
<p class=MsoNormal><span class=GramE><em>unsigned</em></span><em> char*</em> <span
class=SpellE><code><span style='font-size:10.0pt'>buf</span></code></span> </p>
<p class=MsoNormal style='margin-left:.5in'>IN: Buffer for the data type object
to be decoded. </p>
<p class=MsoNormal><strong>Returns:</strong> </p>
<p class=MsoNormal style='margin-left:.5in'>Returns an object <span
class=GramE>ID(</span>non-negative) if successful; otherwise returns a negative
value.</p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal><strong>Name:</strong> H5Sencode</p>
<p class=MsoNormal><strong>Signature:</strong> </p>
<p class=MsoNormal style='margin-left:.5in'><span class=SpellE><em>herr_<span
class=GramE>t</span></em></span><span class=GramE><em><span
style='mso-spacerun:yes'> </span></em><code><span style='font-size:10.0pt'>H5Sencode</span></code></span>(<span
class=SpellE><em>hid_t</em></span><em> </em><span class=SpellE><code><span
style='font-size:10.0pt'>obj_id</span></code></span><code><span
style='font-size:10.0pt'>, </span></code><code><i style='mso-bidi-font-style:
normal'><span style='mso-ansi-font-size:12.0pt;mso-bidi-font-size:12.0pt;
font-family:"Times New Roman"'>unsigned char*</span></i></code><code><span
style='font-size:10.0pt'> <span class=SpellE>buf</span>, </span></code><span
class=SpellE><code><i style='mso-bidi-font-style:normal'><span
style='mso-ansi-font-size:12.0pt;mso-bidi-font-size:12.0pt;font-family:"Times New Roman"'>size_t</span></i></code></span><code><i
style='mso-bidi-font-style:normal'><span style='mso-ansi-font-size:12.0pt;
mso-bidi-font-size:12.0pt;font-family:"Times New Roman"'>*</span></i></code><code><span
style='font-size:10.0pt'> <span class=SpellE>nalloc</span></span></code>) </p>
<p class=MsoNormal><strong>Purpose:</strong> </p>
<p class=MsoNormal style='margin-left:.5in'>Encode a data space object
description into a binary buffer. </p>
<p class=MsoNormal><strong>Description:</strong> </p>
<p class=MsoNormal style='margin-left:.5in'>Given the data space ID, <span
style='font-size:10.0pt;font-family:"Courier New"'>H5Sencode</span> converts a
data space description into binary form in a buffer.<span
style='mso-spacerun:yes'> </span>Using this binary form in the buffer, a data
space object can be reconstructed using <span style='font-size:10.0pt;
font-family:"Courier New"'>H5Sdecode</span> to return a new object <span
class=GramE>handle(</span><span class=SpellE><i style='mso-bidi-font-style:
normal'>hid_t</i></span>) for this data space.</p>
<p class=MsoNormal style='margin-left:.5in'><o:p> </o:p></p>
<p class=MsoNormal style='margin-left:.5in'>A preliminary <code><span
style='font-size:10.0pt'>H5Sencode</span></code> call can be made to find out
the size of the buffer needed. This value is returned as <span class=SpellE><span
style='font-size:10.0pt;font-family:"Courier New"'>nalloc</span></span>.<span
style='mso-spacerun:yes'> </span>That value can then be assigned to <span
class=SpellE><code><span style='font-size:10.0pt'>nalloc</span></code></span>
for a second <code><span style='font-size:10.0pt'>H5Sencode</span></code> call,
which will retrieve the actual encoded object.<span style='mso-spacerun:yes'>
</span></p>
<p class=MsoNormal style='margin-left:.5in'><o:p> </o:p></p>
<p class=MsoNormal style='margin-left:.5in'>If the library finds out <span
class=SpellE><span style='font-size:10.0pt;font-family:"Courier New"'>nalloc</span></span>
is not big enough for the object, it simply returns the size of the buffer
needed through <span class=SpellE><span style='font-size:10.0pt;font-family:
"Courier New"'>nalloc</span></span> without encoding the provided buffer.</p>
<p class=MsoNormal style='margin-left:.5in'><o:p> </o:p></p>
<p class=MsoNormal style='margin-left:.5in'><strong><span style='font-weight:
normal'>The types of data space we address in this function are null, scalar,
and simple space.<span style='mso-spacerun:yes'> </span>For simple data space,
the information of selection, for example, <span class=SpellE>hyperslab</span> <span
class=GramE>selection,</span> is also encoded and decoded.<span
style='mso-spacerun:yes'> </span>Complex data space has not been implemented
in the library.<o:p></o:p></span></strong></p>
<p class=MsoNormal><strong>Parameters:</strong> </p>
<p class=MsoNormal><span class=SpellE><em>hid_t</em></span> <span class=SpellE><code><span
style='font-size:10.0pt'>obj_id</span></code></span> </p>
<p class=MsoNormal style='margin-left:.5in'>IN: Identifier of the object to be
encoded.</p>
<p class=MsoNormal><span class=GramE><em>unsigned</em></span><em> char*</em> <span
class=SpellE><code><span style='font-size:10.0pt'>buf</span></code></span> </p>
<p class=MsoNormal style='margin-left:.5in'>IN/OUT: Buffer for the object to be
encoded into.<span style='mso-spacerun:yes'> </span>If the provided buffer is
NULL, </p>
<p class=MsoNormal style='margin-left:.5in'><span class=GramE>only</span> the
size of buffer needed is returned through <span class=SpellE><span
style='font-size:10.0pt;font-family:"Courier New"'>nalloc</span></span>. </p>
<p class=MsoNormal><span class=SpellE><em>size_t</em></span><em>*</em> <span
class=SpellE><code><span style='font-size:10.0pt'>nalloc</span></code></span> </p>
<p class=MsoNormal style='margin-left:.5in'>IN: The size of the allocated
buffer.</p>
<p class=MsoNormal style='margin-left:.5in'>OUT: The size of the buffer needed.
</p>
<p class=MsoNormal><strong>Returns:</strong> </p>
<p class=MsoNormal style='margin-left:.5in'>Returns a non-negative value if
successful; otherwise returns a negative value.</p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal><strong>Name:</strong> H5Sdecode</p>
<p class=MsoNormal><strong>Signature:</strong> </p>
<p class=MsoNormal style='margin-left:.5in'><span class=SpellE><em>hid_<span
class=GramE>t</span></em></span><span class=GramE><em><span
style='mso-spacerun:yes'> </span></em><code><span style='font-size:10.0pt'>H5Sdecode</span></code></span>(<code><i
style='mso-bidi-font-style:normal'><span style='mso-ansi-font-size:12.0pt;
mso-bidi-font-size:12.0pt;font-family:"Times New Roman"'>unsigned char*</span></i></code><code><span
style='font-size:10.0pt'> <span class=SpellE>buf</span></span></code>) </p>
<p class=MsoNormal><strong>Purpose:</strong> </p>
<p class=MsoNormal style='margin-left:.5in'>Decode a binary object description
of data space and return a new object handle. </p>
<p class=MsoNormal><strong>Description:</strong> </p>
<p class=MsoNormal style='margin-left:.5in'>Given an object description of data
space in binary in a buffer, <span style='font-size:10.0pt;font-family:"Courier New"'>H5Sdecode</span>
reconstructs the HDF5 data type object and returns a new object handle for
it.<span style='mso-spacerun:yes'> </span>The binary description of the object
is encoded by <span style='font-size:10.0pt;font-family:"Courier New"'>H5Sencode</span>.<span
style='mso-spacerun:yes'> </span>User is responsible for passing in the right
buffer.</p>
<p class=MsoNormal style='margin-left:.5in'><o:p> </o:p></p>
<p class=MsoNormal style='margin-left:.5in'><strong><span style='font-weight:
normal'>The types of data space we address in this function are null, scalar,
and simple space.<span style='mso-spacerun:yes'> </span>For simple data space,
the information of selection, for example, <span class=SpellE>hyperslab</span> <span
class=GramE>selection,</span> is also encoded and decoded.<span
style='mso-spacerun:yes'> </span>Complex data space has not been implemented
in the library.<o:p></o:p></span></strong></p>
<p class=MsoNormal><strong>Parameters:</strong> </p>
<p class=MsoNormal><span class=GramE><em>unsigned</em></span><em> char*</em> <span
class=SpellE><code><span style='font-size:10.0pt'>buf</span></code></span> </p>
<p class=MsoNormal style='margin-left:.5in'>IN: Buffer for the data space
object to be decoded. </p>
<p class=MsoNormal><strong>Returns:</strong> </p>
<p class=MsoNormal style='margin-left:.5in'>Returns an object <span
class=GramE>ID(</span>non-negative) if successful; otherwise returns a negative
value.</p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal><o:p> </o:p></p>
<p class=MsoNormal><o:p> </o:p></p>
</div>
</body>
</html>
|