File: HepMC2_user_manual.tex

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\documentclass[11pt,letterpaper]{article}
\usepackage{epsfig}
\usepackage{graphicx}
\usepackage{graphics}  
\usepackage{cite}      % bibliographic sitations 
\usepackage{fancybox}  %allows for shadow boxes etc.
\usepackage{color}     %allows use of colors (RBG only, I think)
\usepackage{html}      % allows easy inclusion of links which are
                       % interpretted properly by both latex and latex2html
\topmargin -0.5in
\setlength{\textwidth}{6.5in}
\setlength{\textheight}{8.75in}
\setlength{\oddsidemargin}{0in}
\setlength{\evensidemargin}{0in}

%
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%

\begin{document}

%
%%%%%%%%%%%%%%%%%%%%%%%
% Define new commands %
%%%%%%%%%%%%%%%%%%%%%%%
%
% choose one of the following definitions of mycomment (second = good copy)
\newcommand{\mycomment}[1]{\marginpar{\it\tiny #1}} % used for margin comments
%\newcommand{\mycomment}[1]{\typeout{#1}}
\newcommand{\txt}[1]{{\mbox{\tiny #1}}} %facilitates sub/superscripts
                                        % that aren't italicized
\newcommand{\order}{{\cal O}}

\newenvironment{mylist}
{\begin{list}{}{
  \setlength{\leftmargin}{0.5cm}
  \setlength{\itemsep}{0pt}
  \setlength{\parsep}{0pt}
  \setlength{\topsep}{0pt}
  \renewcommand{\makelabel}{}}}
{\end{list}}

%%%%  \vspace{-.2cm} {\bf \underline{\sc #1}} \vspace{-.2cm}
\newenvironment{myitemize}[1]
{ \begin{small}
  {\bf \underline{\sc #1}} \vspace{-.2cm}
  \begin{itemize}
  \setlength{\itemsep}{-4pt}
  \setlength{\parsep}{0pt}
  \setlength{\topsep}{0pt}
  \setlength{\partopsep}{0pt}
}
{\end{itemize}\end{small}}
\newcommand{\myitem}[2]{ \item {\bf #1}: {\it #2} }

% from page 4 of fancybox.sty manual
\newenvironment{fminipage}%
{\begin{Sbox}\begin{minipage}}%
{\end{minipage}\end{Sbox}\fbox{\TheSbox}}
%
% use 
% \begin{fminipage}{3in} 
%     the text paragraph is 3 inchs wide
% \end{fminipage}
% to have a multi-line framed box
%
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%
\begin{titlepage}
{\tiny \LaTeX-ed on \today.}

\vspace{2cm}

\begin{center}

{\Huge\bf HepMC 2}

\vspace{1cm}

{\huge a C++ Event Record for Monte Carlo Generators }

\vspace{2cm}

\htmladdnormallink{http://savannah.cern.ch/projects/hepmc/}
{http://savannah.cern.ch/projects/hepmc/}

\vspace{1cm}

{\Large User Manual Version 2.06} \\
May 17, 2010

\vspace{2cm}

{\huge Matt Dobbs} \\
University of Victoria, Canada

\vspace{.2cm}

{\Large J$\o$rgen Beck Hansen} \\
CERN

\vspace{.2cm}

{\Large Lynn Garren} \\
Fermi National Accelerator Laboratory

\vspace{.2cm}

{\Large Lars Sonnenschein} \\
RWTH Aachen

\vspace{1cm}

\end{center}
\begin{abstract}
  The HepMC package is an object oriented event record written in C++
  for High Energy Physics Monte Carlo Generators.  Many extensions
  from HEPEVT, the Fortran HEP standard, are supported: the number of
  entries is unlimited, spin density matrices can be stored with each
  vertex, flow patterns (such as color) can be stored and traced,
  integers representing random number generator states can be stored,
  and an arbitrary number of event weights can be included.  Particles
  and vertices are kept separate in a graph structure, physically
  similar to a physics event.  The added information supports the
  modularisation of event generators.  The package has been kept as
  simple as possible with minimal internal/external dependencies.
  Event information is accessed by means of iterators supplied with
  the package. 

  HepMC 2 is an extension to the original HepMC written by Matt Dobbs.
\end{abstract}
\end{titlepage}

\setcounter{page}{1}
\tableofcontents
\listoffigures
\listoftables

\newpage

%
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%

\section{Introduction}
This user manual is intended as a companion to the 
\htmladdnormallinkfoot{online documentation}
{http://lcgapp.cern.ch/project/simu/HepMC/},
and together with the examples
should provide a friendly introduction to the HepMC event record. A
general overview is available in Ref.~\cite{dobbs:2000CompPhysComm}.

The HEP community has moved towards Object-Oriented computing tools
(usually C++): most upcoming experiments are choosing OO software
architecture, and Pythia 8~\cite{Torbjorn} and 
Herwig++~\cite{Richardson}, written in C++, are available.  
A standard event record must be simple for the end user to access information,
while maintaining the power and flexibility offered by OO design. The
HepMC event record has been developed to satisfy these criteria.

HepMC is an object oriented event record written in C++ for Monte
Carlo Generators in High Energy Physics. It has been developed
independent of a particular experiment or event generator.  It is
intended to serve as both a ``container class'' for storing events after
generation and also as a ``framework'' in which events can be built up
inside a set of generators. This allows for the modularisation of
event generators---wherein different event generators could be
employed for different steps or components of the event generation
process (illustrated in Figure~\ref{modularisation}).
\footnote{
%
At the {\it Physics at TeV Colliders Workshop 2001} in Les
Houches, France, a group of Monte Carlo authors and experimentalists
produced a document~\cite{Boos:2001cv} which outlines the information
content necessary for two event generators to communicate information
about a hard process to the subsequent stages of event
generation. This was implemented in a set of Fortran common blocks,
and many ideas from HepMC were used, such as the scheme for handling
color flow information. Version 1.1 of HepMC supports the full event
information content of Ref.~\cite{Boos:2001cv} (run
information---pertaining to a collection of events---is also specified
in that document and is not addressed in HepMC).  }

\begin{figure}[h]
  \begin{center}
    \Ovalbox{\begin{minipage}{5in}\begin{small}
        \begin{tabular}{rcl}
          $\overbrace{\mbox{Hard~Process~Generator}}^{
            \mbox{\color{magenta}Specific NLO Generator}}$ &
          $\stackrel{\rm \color{blue}Event~Record}{\rightarrow\rightarrow}$ &
          $\overbrace{\mbox{Cascade~Package}}^{
            \mbox{\color{magenta}ARIADNE}}$ \\
          &
          $\stackrel{\rm \color{blue}Event~Record}{\rightarrow\rightarrow}$ &
          $\overbrace{\mbox{Hadronization~Package}}^{
            \mbox{\color{magenta}Herwig}}$ \\
          &
          $\stackrel{\rm \color{blue}Event~Record}{\rightarrow\rightarrow}$ &
          $\overbrace{\mbox{Decay~Package}}^{
            \mbox{\color{magenta}EvtGen}}$ \\
          &
          $\stackrel{\rm \color{blue}Event~Record}{\rightarrow\rightarrow}$ &
          $\overbrace{\mbox{Detector~Simulation}}^{
            \mbox{\color{magenta}ATLfast}}$ \\
        \end{tabular}\end{small}
      \end{minipage}}\end{center}
  \caption[Modularised event generation]{\label{modularisation} 
    HepMC supports the concept of modularised event generation
    (illustrated above) by containing sufficient information within the
    event record to act as a messenger between two modular steps in
    the event generation process.  }
\end{figure}


Physics events are generally visualised using diagrams with a graph structure
(Figure~\ref{graph_structure}, left) which HepMC imitates by separating
out particles from vertices and representing them as the edges and
nodes respectively of a graph~\footnote{
  Ref.~\cite{mc++} uses a similar structure.} 
(Figure~\ref{graph_structure}, right). Each vertex maintains a listing of
its incoming and outgoing particles, while each particle points back
to its production vertex and decay vertex.
The extension to  multiple collisions is natural - the 
super-position of graphs from several different initial processes - 
and so the event may contain an unlimited number 
of (possibly interconnected) graphs. 
The number of vertices/particles in each event is also open-ended.
A subset of the event (such as one connected graph or a single vertex
and its descendants) may be examined or modified without having to
interpret complex parent/child relationship codes or re-shuffle the rest 
of the event record.

\begin{figure}[h]
  \begin{center}
     \parbox[c]{55mm}{\includegraphics[height=45mm,clip=]
       {physicist_visualization.eps}}
     \mbox{\huge ${\stackrel{\rm HepMC}{\rightarrow}}$}
     \parbox[c]{45mm}{\includegraphics[height=45mm,clip=]
       {graph_interpretation.eps}}
  \end{center}
  \caption[Event visualization]
   {\label{graph_structure} Events in HepMC are stored in a graph
    structure (right), similar to a physicist's visualisation of a
    collision event (left).}
\end{figure}

%
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%

\subsection{Features of the HepMC Event Record}

\begin{itemize}\setlength{\itemsep}{0pt}
\item simple - easy access to information provided by iterators
      and range methods
\item minimum dependencies
\item information is stored in a graph structure, 
  physically similar to a collision event
\item allows specification of momentum and length units
\item allows for the inclusion of spin density matrices 
\item allows for the tracing of an arbitrary number of flow patterns
\item ability to store the state of random number generators (as
  integers)
\item ability to store an arbitrary number of event weights
\item ability to store parton distribution function information
\item ability to store heavy ion information 
\item ability to store generated cross section information on
      an event by event basis
\item strategies for conversion to/from HEPEVT (Ref.~\cite{Boos:2001cv}) 
  which are easily extendible to support other event records
\item strategies for input/output to/from Ascii files which
  are easily extendible to support other forms of persistency
\item support for standard streaming I/O
\end{itemize}

%
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%

\section{HepMC 2}

Since January 2006, HepMC has been supported as an LCG external package.
The official web site is now \htmladdnormallink 
{http://savannah.cern.ch/projects/hepmc/} 
{http://savannah.cern.ch/projects/hepmc/}, 
and compiled libraries for supported platforms are available at 
/afs/cern.ch/sw/lcg/external/HepMC.

Historically, HepMC has used CLHEP (Ref.~\cite{clhep}) Lorentz vectors.  Some users wished to use
a more modern Lorentz vector package.  At the same time, 
there was concern about allowing dependencies on any external package.  
Therefore, the decision was made to replace the CLHEP Lorentz vectors with
a minimal vector representation within HepMC.  

Because this is a major change, the versioning was changed 
from 1.xx.yy to 2.xx.yy.  Normally, a version number change in \emph{xx} 
represents a change to the code and a version number change in \emph{yy}
represents a bug fix.

There have also been continuing requests for other features.
Changes to HepMC must be approved by the LCG simulation project 
(Ref.~\cite{lcgsim}).  

%
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%

\subsection{Overview of Changes Since HepMC 1.26}

See the HepMC ChangeLog~\cite{changelog} for a complete listing.

GenEvent now contains pointers to a heavy ion class, a PDF information class,
and a generated cross section class.
The pointers are null by default.  
In addition, GenEvent now has the capability to declare which
momentum and position units are used.

GenParticle momentum and GenVertex position are represented by a simple FourVector 
class instead of the CLHEP Lorentz vectors.  
The SimpleVector.h header contains the FourVector and ThreeVector classes.
GenVertex will return the ThreeVector portion of the position.
Polarization will accept or return a ThreeVector representation 
of the polarization.

Both FourVector and ThreeVector have templated constructors.  
These constructors allow you to use the GenParticle and GenVertex constructors
with \emph{any} Lorentz vector, as long as the Lorentz vector has 
\verb!x()!, \verb!y()!, \verb!z()!, and \verb!t()! methods.

The generated mass, which has always been part of the HEPEVT common block, 
is now stored in GenParticle.  
When a particle has large momentum and small mass, 
calculating the mass from the momentum is unreliable.
Also, different machine representations and roundoff errors mean that
a calculated mass is not always consistent.
If no generated mass is set, then the mass is calculated from the momementum 
and stored in GenParticle.

The IO\_AsciiParticles class provides output in the Pythia style.
This output is intended for ease of reading event output, not for persistency.

The IO\_Ascii output class has been replaced with of IO\_GenEvent, 
described in Section~\ref{iogenevent}.  
IO\_GenEvent persists all information in the updated GenEvent object and
uses iostreams for greater flexibility.  IO\_GenEvent also has a 
constructor taking a file name and mode type for backwards compatibility. 
Output remains in Ascii format.

Streaming I/O of GenEvent objects may also be done without using IO\_GenEvent.

The new HepMCDefs.h header allows users to query which features are 
enabled.

%
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%

\section{Package Structure}

Entries within the event record are separated into particles and
vertices. Each particle is composed of momentum, flow, and
polarization classes as well as id and status information. 
The vertices are the connection nodes
between particles and are a container class for particles: thus each
particle within an event belongs to at least one vertex. In addition
the vertex is composed of position, id, and (spin density matrix) 
weight information. Particles and vertices are uniquely identified by
an integer---referred to as a ``barcode''---which is meant to be a
persistent label for a particular particle instance.
The event is the container class for all (possibly
inter-connected) vertices in the event and contains process id, event
number, unit information, weight, and random number state information.

Please note that the barcodes are intended for internal use within HepMC 
as a unique identifier for the particles and vertices.
Using the barcode to encode extra information is an abuse of 
the barcode data member and causes confusion among users. 

Iterators are provided as methods of the vertex and event classes
which allow easy directed access to information in the C++ Standard
Template Library (STL) style.   
In addition, the GenRanges header contains several iterator 
classes which explicity provide begin() and end() methods for the various
public iterator types, allowing the user to easily use such utilities as
std::foreach.

\begin{figure}[!ht]
  \begin{center}
    \includegraphics[width=\textwidth,clip=]{HepMC_basic_properties.eps}
  \end{center}
  \caption[HepMC class diagrams]
    {\label{UML_diagrams} Class diagrams for the event record
    classes (GenEvent, GenVertex, and GenParticle) and the IO strategies
    are shown in the UML notation.}
\end{figure}
\clearpage

The event record class relationships are shown in Figure~\ref{UML_diagrams}.

Several input/output strategies are provided. The interface for these
strategies is defined by an abstract base class, IO\_BaseClass.  These
strategies are capable of input/output of events and as such they depend 
directly on the event record class.

The package consists of about 5500~lines of code including
$\approx$1500~comments. There are 7 core classes (GenEvent,
GenVertex, GenParticle, Flow, Polarization, WeightContainer,
IO\_BaseClass) and several utility classes (i.e.\ IO\_HEPEVT, IO\_GenEvent,
HEPEVT\_Wrapper, PythiaWrapper, \ldots).

\subsection{Dependencies}

The HepMC 2 package  depends only on the C++ Standard
Template Library~\cite{stl} (STL).

The HepMC 1 package dependencies were limited to STL 
and the vector classes from the
Class Library for High Energy Physics~\cite{clhep} (CLHEP).  

Simple wrappers for the Fortran versions of Pythia~\cite{Sjostrand:2001yb} 
and Herwig~\cite{herwig} are supplied with the
package to allow the inclusion of event generation examples.

\subsection{Namespace}

The HepMC package is written within the HepMC:: namespace. Outside of
this namespace all class names will need to be prefixed by HepMC::.

The units methods and enums are in the HepMC::Units:: namespace.

\subsection{Performance}

The CPU time performance of the HepMC event record has been quantified
by generating 1000 LHC $W\gamma$ production events using Pythia 5.7
and transferring the event record to HepMC using the IO\_HEPEVT
strategy. Results are summarised in Table~\ref{benchmarks}.
Generation of events in Pythia required 29 seconds of CPU time.
Generating the same events and transferring them into HepMC required
34 seconds.

\begin{table}[h]
\begin{center}
\begin{tabular}{|l l l|c|c|} \hline
&&&CPU Time & File Size \\ \hline
Pythia &           &          & 29 sec & \\
       & + {\color{red}HepMC}   &          & 34 sec & \\ \hline
       & + {\color{red}HepMC} & + {\color{red}IO\_Ascii} 
       & 64 sec & 60.5 Mbytes \\
       & + {\color{green}LCWRITE} &          
       & 92 sec & 106 Mbytes \\
\multicolumn{3}{|l|}{HEPEVT raw size 1K events, 500K particles}
&& 48.2 Mbytes \\ \hline
\end{tabular}
\end{center}
\caption[Performance]{\label{benchmarks} 
  CPU time performance and file size using a dedicated 450 MHz Pentium~III.}
\end{table}

The time to write HepMC events as Ascii files using the IO\_Ascii
strategy was compared to \verb!LCWRITE!, a simple Fortran routine used
in NLC studies to write the HEPEVT common block in formatted Ascii to file.
Generating the events with Pythia, transferring them to HepMC, and
writing them to file took 64~seconds and produced a 60.5~Mbyte file.
Generating the events with Pythia and writing them to file using the
\verb!LCWRITE! subroutine took 92~seconds and produced a 106~Mbyte
file. Compression algorithms (such as \verb!gzip!) can reduce the file
sizes by a factor 3 or more.  The raw size of the HEPEVT common block
for these 1000~events (which in this case produced about 500K~particles) is
48.2~Mbytes.  In both cases most CPU time is spent writing to file.
HepMC benefits from added logic when interpreting the record and from 
position information which is stored once for each vertex, rather than
with every particle.  

CPU time savings will be realized when HepMC is
used inside event generators - since it is possible to target and
modify one area of the particle/vertex graph without re-shuffling the
rest of the event record.

%
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%
\section{Overview of Core Classes}

\underline{\bf NOTE ABOUT UNITS}:
HepMC does not define which units are used for the information stored
in the event record.
The HEPEVT standard uses GeV/mm, and so the output from most Fortran
generators will normally be in these units.
CLHEP and Geant4 use MeV/mm, and some collaborations such as ATLAS
have adopted these units for their simulation.
We also note that Fluka uses cm.

As of HepMC 2.04.00, GenEvent contains member data to store information
about units used.  Default units are declared with configure switches 
--with-momentum and --with-length.  
These configure switches are required.

HepMC users should refer to the code that fills the event record 
to determine which units are being used.

%
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%

\subsection{HepMC::GenEvent}
\begin{myitemize}{Important Public Methods}
  \myitem{GenEvent(Units::MomentumUnit, Units::LengthUnit,...)}{As of
    HepMC 2.04.00, additional constructors are available to enable
    unit specification - see also use\_units below.}
  \myitem{add\_vertex}{adopts the specified vertex to the event and
    assumes responsibility for deleting the vertex}
  \myitem{remove\_vertex}{removes the specified vertex from the event,
    the vertex is not deleted - thus use of this method is normally
    followed directly by a delete vertex operation}
  \myitem{vertex\_iterator}{iterates over all vertices in the event -
    described in the iterator section}
  \myitem{particle\_iterator}{iterates over all particles in the event
    - described in the iterator section}
  \myitem{vertex\_const\_iterator}{constant version of the vertex\_iterator}
  \myitem{particle\_const\_iterator}{constant version of 
	the particle\_iterator}
  \myitem{vertex\_range}{provides begin() and end() for ease of use with 
          external fuctions, such as for\_each}
  \myitem{particle\_range}{provides begin() and end() for ease of use with 
          external fuctions, such as for\_each}
  \myitem{print}{gives a formatted printout of the event to the
    specified output stream}
  \myitem{barcode\_to\_particle}{ returns a pointer to the particle
  	associated with the integer barcode argument }
  \myitem{barcode\_to\_vertex}{ returns a pointer to the vertex
  	associated with the integer barcode argument }
  \myitem{use\_units}{set both momentum and position units, and scale FourVectors if necessary}
  \myitem{read}{read ascii input directly from an istream}
  \myitem{write}{write ascii output directly to an ostream}
\end{myitemize}
\begin{myitemize}{Relevant Data Members}
  \myitem{signal\_process\_id}{an integer ID uniquely specifying the
    signal process (i.e.\ MSUB in Pythia).}
  \myitem{event\_number}{integer}
  \myitem{event\_scale}{(optional) the scale of this event.
	(-1 denotes unspecifed)}
  \myitem{alphaQCD}{(optional) the value of the strong coupling
    constant $\alpha_{QCD}$
	 used for this event. (-1 denotes unspecifed)}
  \myitem{alphaQED}{(optional) the value of the electroweak coupling
    constant $\alpha_{QED}$ (e.g.\ $\frac{1}{128}$)
	 used for this event. (-1 denotes unspecifed)}
  \myitem{signal\_process\_vertex}{(optional) pointer to the vertex
    defined as the signal process - allows fast navigation to the core
    of the event}
  \myitem{beam\_particle\_1}{(optional) pointer to the first incoming beam particle }
  \myitem{beam\_particle\_2}{(optional) pointer to the second incoming beam particle }
  \myitem{weights}{a container of an arbitrary number of 8 byte 
    floating point event weights and their associated names}
  \myitem{random\_states}{a container of an arbitrary number of 4 byte
    integers which define the random number generator state just
    before the event generation}
  \myitem{heavy\_ion}{(optional) a pointer to a HeavyIon object 
                      (zero by default)}
  \myitem{pdf\_info}{(optional) a pointer to a PdfInfo object 
                     (zero by default)}
  \myitem{cross\_section}{(optional) a pointer to a GenCrossSection object 
                     (zero by default)}
  \myitem{momentum\_unit}{momentum units (MEV or GEV)}
  \myitem{length\_unit}{position units (MM or CM)}
\end{myitemize}
\begin{myitemize}{Important Free Functions}
  \myitem{operator $>>$}{read ascii input directly from an istream}
  \myitem{operator $<<$}{write ascii output directly to an ostream}
\end{myitemize}
\begin{myitemize}{Notes and Conventions}
  \item if hit and miss Monte Carlo integration is to be performed
    with a single event weight, the first weight will be used by default
  \item Memory allocation: vertex and particle objects will normally
    be created by the user with the NEW operator. Once a vertex
    (particle) is added to a event (vertex), it is "adopted" and
    becomes the responsibility of the event (vertex) to delete that
    vertex (particle).
  \item Although default units are specified with configure, the user
    is strongly encouraged to explicitly set units with either the
    appropriate constructor or a call to set\_units.
\end{myitemize}

The GenEvent is the container class for vertices. 
A listing of all vertices is maintained with the event, giving fast
access to vertex information. GenParticles are accessed by means of the
vertices.

Extended event features 
(weights, random\_states, heavy\_ion, pdf\_info, cross\_section) 
have been implemented such that if left empty/unused performance and memory
usage will be similar to that of an event without these features.

Iterators are provided as members of the GenEvent class
(described in Section~\ref{iterators}). Methods which fill containers of
particles or vertices are {\it not provided}, as the STL provides these
functionalities with algorithms such as \verb!copy! and iterator adaptors
such as \verb!back_inserter! giving a clean generic approach.
Using this functionality it is easy to obtain lists of
particles/vertices given some criteria - such as a list of all final
state particles. Classes which provide the criteria (called
predicates) are also {\it not provided}, as the number of
possibilities is open ended and specific to the application -
and would clutter the HepMC package. Implementing a predicate is
simple (about 4 lines of code).
Examples are given in the GenEvent header file and in
\verb!example_UsingIterators.cc! (Section~\ref{examples}).
Useful examples can also be found in testHepMCIteration.cc.

The signal\_process\_id is packaged with each event (rather than being
associated with a run class for example) to handle the possibility of
many processes being generated within the same run. A container of
tags specifying the meaning of the weights and random\_states entries
is envisioned as part of a run class - which is beyond the scope of an
event record.

%
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%

\subsubsection{HepMC::PdfInfo}
\begin{myitemize}{Relevant Data Members}
  \myitem{id1}{flavour code of first parton}
  \myitem{id2}{flavour code of second parton }
  \myitem{pdf\_id1}{LHAPDF set id of first parton}
  \myitem{pdf\_id2}{LHAPDF set id of second parton}
  \myitem{x1}{fraction of beam momentum carried by first parton ("beam side")}
  \myitem{x2}{fraction of beam momentum carried by second parton ("target side")}
  \myitem{scalePDF}{Q-scale used in evaluation of PDF's (in GeV)}
  \myitem{pdf1}{PDF (id1, x1, Q)  This should be of the form x*f(x)}
  \myitem{pdf2}{PDF (id2, x2, Q)  This should be of the form x*f(x)}
\end{myitemize}
\begin{myitemize}{Notes and Conventions}
  \item The LHAPDF\cite{lhapdf} set ids are the entries in the first column of
	\htmladdnormallink
	{http://projects.hepforge.org/lhapdf/PDFsets.index}
	{http://projects.hepforge.org/lhapdf/PDFsets.index}.
  \item The LHAPDF set ids pdf\_id1 and pdf\_id2 are zero by default.
  \item IMPORTANT: The contents of pdf1 and pdf2 are expected to be x*f(x), 
        which is the quantity returned by LHAPDF.
  \item IMPORTANT: Input parton flavour codes id1 and id2 are expected to 
        obey the PDG code conventions, especially g = 21. 
\end{myitemize}

PdfInfo stores additional PDF information for a GenEvent.
Creation and use of this information is optional. 

%
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%

\subsubsection{HepMC::HeavyIon}
\begin{myitemize}{Relevant Data Members}
  \myitem{Ncoll\_hard}{Number of hard scatterings}
  \myitem{Npart\_proj}{Number of projectile participants}
  \myitem{Npart\_targ}{Number of target participants}
  \myitem{Ncoll}{Number of NN (nucleon-nucleon) collisions}
  \myitem{N\_Nwounded\_collisions}{Number of N-Nwounded collisions}
  \myitem{Nwounded\_N\_collisions}{Number of Nwounded-N collisons}
  \myitem{Nwounded\_Nwounded\_collisions}{Number of Nwounded-Nwounded collisions}
  \myitem{spectator\_neutrons}{Number of spectators neutrons}
  \myitem{spectator\_protons}{Number of spectators protons}
  \myitem{impact\_parameter}{Impact Parameter(fm) of collision}
  \myitem{event\_plane\_angle}{Azimuthal angle of event plane}
  \myitem{eccentricity}{eccentricity of participating nucleons
         in the transverse plane (as in phobos nucl-ex/0510031)}
  \myitem{sigma\_inel\_NN }{nucleon-nucleon inelastic 
                          (including diffractive) cross-section}
\end{myitemize}

HeavyIon provides additional information storage in GenEvent for Heavy Ion
generators.  Creation and use of this information is optional. 


%
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%

\subsubsection{HepMC::GenCrossSection}
\begin{myitemize}{Relevant Data Members}
  \myitem{cross\_section}{cross section in pb}
  \myitem{cross\_section\_error}{error associated with this cross section in pb}
\end{myitemize}

GenCrossSection provides additional storage in GenEvent for an event by event 
snapshot of the cross section while events are being generated.
It is expected that the final cross section will be stored elsewhere.
Creation and use of this information is optional. 

%
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%

\subsubsection{HepMC::Units}
\begin{myitemize}{Important Methods}
  \myitem{enum MomentumUnit}{values are MEV or GEV}
  \myitem{enum LengthUnit}{values are MM or CM}
  \myitem{std::string name(MomentumUnit)}{return the unit designation as a string}
  \myitem{std::string name(LengthUnit)}{return the unit designation as a string}
\end{myitemize}
\begin{myitemize}{Notes and Conventions}
  \item Refer to a unit enum as, for instance, HepMC::Units::GEV
  \item Whenever both unit types are passed, MomentumUnit always goes first.
\end{myitemize}

Units is a namespace encapsulating methods used for unit manipulation.
Default units are set at compile time by the configure switches
--with-momentum and --with-length.  

%
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%

\subsection{HepMC::GenVertex}
\begin{myitemize}{Important Public Methods}
  \myitem{add\_particle\_in}{adds the specified particle to the
    container of incoming particles}
  \myitem{add\_particle\_out}{adds the specified particle to the
    container of outgoing particles}
  \myitem{remove\_particle}{removes the specified particle from
    both/either of the incoming/outgoing particle containers, the
    particle is not deleted - thus use of this method is normally
    followed directly by a delete particle operation}
  \myitem{vertex\_iterator}{iterates over vertices in the graph,
    given a specified range - described in the iterator section}
  \myitem{particle\_iterator}{iterates over particles in the graph,
    given a specified range - described in the iterator section}
  \myitem{particles}{provides begin() and end() for ease of use with 
          external fuctions, such as for\_each}
  \myitem{particles\_in}{provides begin() and end() for ease of use with 
          external fuctions, such as for\_each}
  \myitem{particles\_out}{provides begin() and end() for ease of use with 
          external fuctions, such as for\_each}
\end{myitemize}
\begin{myitemize}{Relevant Data Members}
  \myitem{position}{$\vec{x},ct$ stored as FourVector}
  \myitem{id}{integer id, may be used to specify a vertex type}
  \myitem{weights}{a container of 8 byte floating point numbers of
    arbitrary length, could be mapped in pairs into rows and columns to
    form spin density matrices of complex numbers}
  \myitem{barcode}{an integer which uniquely identifies the GenVertex
    within the event. For vertices the barcodes are always negative integers.}
\end{myitemize}
\begin{myitemize}{Notes and Conventions}
  \item no standards are currently defined for the vertex id
  \item once a particle is added, the vertex becomes its owner and is
    responsible for deleting the particle
\end{myitemize}

The GenVertex is the container class for particles and forms the nodes
which link particles into a graph structure.

The weights container is included with each vertex with the intention
of storing spin density matrices. It is envisioned that a
generator package would assign spin density matrices to particle
production vertices and provide the functional form of the frame
definition for the matrix as a ``look-up'' method for interpreting
the weights. The generator package would also provide a boost method
to go from the frame of the density matrix to the lab frame and back
without destroying correlations. This gives maximum freedom to the
sub-generators - allowing for different form definitions.
This implementation is consistent with the EvtGen B-decay
package~\cite{evtgen} requirements. 

%
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%

\subsection{HepMC::WeightContainer}
\begin{myitemize}{Relevant Data Members}
  \myitem{weights}{a vector of 8-byte floating point weights}
  \myitem{names}{a map of strings associated with a position in the weights vector}
\end{myitemize}
\begin{myitemize}{Notes and Conventions}
\item methods are coded and names chosen in the spirit of the
  STL vector class
\end{myitemize}

The WeightContainer is a storage area for double precision
weights used in GenEvent and GenVertex and their associated names. 
WeightContainer mimics both a map class and the STL vector class, 
and its member functions are chosen in that spirit.  
You might, for instance, use the GenEvent weights to include
information about differential cross sections.

%
%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%
%

\subsection{HepMC::GenParticle}
\begin{myitemize}{Important Public Methods}
  \myitem{operator FourVector}{conversion operator -
    resolves the particle as a 4-vector according to its momentum}
  \myitem{generatedMass}{generated mass}
  \myitem{momentum().m()}{calculates mass from momentum}
  \myitem{particles\_in}{provides begin() and end() for ease of use with 
          external fuctions, such as for\_each}
  \myitem{particles\_out}{provides begin() and end() for ease of use with 
          external fuctions, such as for\_each}
\end{myitemize}
\begin{myitemize}{Data Members}
  \myitem{momentum}{$\vec{p},cE$ stored as FourVector}
  \myitem{generated\_mass}{generated mass for this particle}
  \myitem{pdg\_id}{unique integer ID specifying the particle type}
  \myitem{status}{integer specifying the particle's status
  (i.e.\ decayed or not)}
  \myitem{flow}{allows for the storage of flow patterns (i.e. color
    flow), refer to Flow class}
  \myitem{polarization}{stores the particle's polarization as
  $(\theta,\phi)$, refer to Polarization class}
  \myitem{production\_vertex}{pointer to the vertex where the particle
    was produced, can only be set by the vertex}
  \myitem{end\_vertex}{pointer to the vertex where the particle decays, 
    can only be set by the vertex}
  \myitem{barcode}{an integer which uniquely identifies the GenParticle
    within the event. For particles the barcodes are always positive integers.}
\end{myitemize}
\begin{myitemize}{Notes and Conventions}
  \item the particle ID should be specified according to the 
    PDG standard~\cite{Yao:2006tx}
  \item the status code should be specified according to the clarified  
     HEPEVT status codes
\end{myitemize}

The particle is the basic unit within the event record. The GenParticle
class is composed of the FourVector, Flow, and Polarization classes. 

Pointers to the particle's production and end vertex are included. In
order to ensure consistency between vertices/particles - these
pointers can only be set from the vertex. Thus adding a particle to
the particles\_in container of a vertex will automatically set the
end\_vertex of the particle to point to that vertex. 

The definition of a HepLorentzVector scope resolution operator allows
for the use of 4-vector algebra with particles (i.e.\ preceding an
instance, \verb!particle!, of the HepMC::GenParticle class by
\verb!(HepLorentzVector)particle!  causes it to behave exactly like
its 4-vector momentum, examples are given in the particle header file).

A second 4-vector for the particle's momentum at decay time has 
{\it not} been included (as for example in~\cite{mc++}, where the
second momentum vector is included to facilitate tracking through
material). If this is desirable, one can simply add a decay vertex
with the same particle type going out. This is intuitive, since a
change in momentum cannot occur without an interaction (vertex).

After some discussion, the authors in MCnet~\cite{mcnet} have agreed to a 
clarification of the HEPEVT~\cite{stdhep5.05} status codes. 
The Fortran Monte Carlo generators will not change their behaviour, 
but Sherpa, Pythia8, and Herwig++ will go to the newer usage.\newline
These are the accepted status code definitions:
\begin{myitemize}{}
 \myitem{0     }{an empty entry with no meaningful information 
		    and therefore to be skipped unconditionally}
 \myitem{1     }{a final-state particle, i.e. a particle that is not decayed 
 further by the generator (may also include unstable particles
 that are to be decayed later, as part of the detector simulation).
 Such particles must always be labelled '1'.}
 \myitem{2     }{decayed Standard Model hadron or tau or mu lepton, 
 excepting virtual intermediate states thereof (i.e. the
 particle must undergo a normal decay, not e.g. a 
 shower branching). Such particles must always be labelled '2'. 
 No other particles can be labelled '2'.}
 \myitem{3     }{a documentation entry}
 \myitem{4     }{an incoming beam particle}
 \myitem{5-10  }{undefined, reserved for future standards}
 \myitem{11-200}{an intermediate (decayed/branched/...) particle that 
       does not fulfill the criteria of status code 2, 
       with a generator-dependent classification of its nature.}
 \myitem{201-  }{at the disposal of the user, in particular for event
 tracking in the detector}
\end{myitemize}


%
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%

\subsubsection{HepMC::Flow}
\begin{myitemize}{Important Public Methods}
  \myitem{connected\_partners}{returns a container of all particles
    connected via the specified flow pattern}
  \myitem{dangling\_connected\_partners}{returns a container of all
    particles ``dangling'' from the ends of the specified flow
    pattern}
\end{myitemize}
\begin{myitemize}{Relevant Data Members}
  \myitem{particle\_owner}{points back to the particle to which 
    the flow object belongs}
  \myitem{icode map}{container of integer flow codes - each entry has
    an index and an icode}
\end{myitemize}
\begin{myitemize}{Notes and Conventions}
  \item code indices 1 and 2 are reserved for color flow
\end{myitemize}

The Flow class is a data member of the GenParticle---its use is
optional.  It stores flow
pattern information as a series of integer flow codes and indices.
This method features the possibility
of storing non-conserved flow patterns (such as baryon number
violation in SUSY models).
Some examples of integer flow code representation for several events
are provided in Ref.~\cite{Boos:2001cv}.

The Flow class is used to keep track of flow patterns within a graph -
each pattern is assigned a unique integer code, and this code is
attached to each particle through which it passes. Different flow
types are assigned different flow indices, i.e.\ color flow uses index
1 and 2. Methods are provided to return a particle's flow partners. An
example is given at the top of the Flow header file.

%
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%

\subsubsection{HepMC::Polarization}
\begin{myitemize}{Important Public Methods}
  \myitem{is\_defined}{returns true if the Polarization has been defined}
  \myitem{set\_undefined}{set this to undefined, resetting theta and phi 
          to their default values}
\end{myitemize}
\begin{myitemize}{Relevant Data Members}
  \myitem{theta}{$\theta$ angle in radians $0\leq\theta\leq\pi$}
  \myitem{phi}{$\phi$ angle in radians $0\leq\phi<2\pi$}
\end{myitemize}
\begin{myitemize}{Notes and Conventions}
  \item the angles are robust - if you supply an angle outside the
    range, it is properly translated (i.e.\ $4\pi$ becomes 0)
\end{myitemize}

Polarization is a data member of GenParticle - its use is
optional. It stores the $(\theta,\phi)$ polarization information which
can be returned as a ThreeVector as well.

%
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%

\subsubsection{HepMC::FourVector}
\begin{myitemize}{Important Public Methods}
  \item A number of simple vector manipulations are available.
          Check the reference manual for details.
\end{myitemize}
\begin{myitemize}{Relevant Data Members}
  \myitem{x}{position x or momentum px}
  \myitem{y}{position y or momentum py}
  \myitem{z}{position z or momentum pz}
  \myitem{t}{time or energy}
\end{myitemize}

GenParticle momentum and GenVertex position are stored as FourVectors.
FourVector has a templated constructor that will automatically convert 
any other vector with x(), y(), z(), and t() access methods to a FourVector.
This feature is used when converting from the HEPEVT common block.

%
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%

\subsection{HepMC::IO\_BaseClass}
\begin{myitemize}{Important Public Methods}
  \myitem{write\_event}{writes out the specified event to the output
    strategy} 
  \myitem{read\_next\_event}{reads the next event from the input
    strategy into memory}
  \myitem{operator$<<$,operator$>>$}{overloaded to give the
    same results as any of the above methods}
\end{myitemize}

IO\_BaseClass is the abstract base class defining the interface and
syntax for input and output strategies of events and particle data tables.

Several IO strategies are supplied:
\begin{itemize}\setlength{\itemsep}{0pt}
  \item {\bf IO\_GenEvent} uses iostreams for input and output
    thereby providing a form of persistency for the event record. 
    This class handles all information found in a GenEvent object.
    This class replaces IO\_Ascii and reads both formats.
    Events may be contained within the same file together with
    an unlimited number of comments. 
    The examples (Section~\ref{examples}) make use of this class.
  \item {\bf IO\_AsciiParticles} writes events in a format similar to 
     Pythia 6 output.  This is intended for human readability.
  \item {\bf IO\_HEPEVT} reads and writes events to/from the Fortran HEPEVT
    common block. It relies on a helper class HEPEVT\_Wrapper which
    is the interface to the common block
    (which is defined in the header file HEPEVT\_Wrapper.h\footnote{
      Different conventions exist for the fortran HEPEVT common
      block. 4 or 8-byte floating point numbers may be used, and the
      number of entries is often taken as 4000 or 10000. To account for
      all possibilities the precision (float or double) and number of
      entries can be set for the wrapper at run time,
      \begin{tabbing}
      i.e.\ \hspace{1cm} \= HEPEVT\_Wrapper::set\_max\_number\_entries(4000);\\
                         \> HEPEVT\_Wrapper::set\_sizeof\_real(8); 
            \hspace{1cm} .
      \end{tabbing}
      To interface properly to HEPEVT and avoid nonsensical
      results, it is essential to get these definitions right
      {\it for your application}. See example\_MyPythia.cc
      (Section~\ref{examples}) for an example.
      }).
    This IO strategy
    provides the means for interfacing to Fortran event
    generators. Other strategies which interface directly to the
    specific event record of a generator could be easily implemented
    in this style. An example of using IO\_HEPEVT to transfer events
    from Pythia into HepMC is given in \verb!example_MyPythia.cc! 
    (Section~\ref{examples}).
\end{itemize}

Note that as of HepMC 2.05 it is possible to read and write events directly
with streaming I/O operators instead of using IO\_GenEvent.  

%
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%

\section{Overview of Iterators}
\label{iterators}

Examples of using the particle/vertex iterators are provided in
\verb!example_UsingIterators.cc! (Section~\ref{examples}).  
Useful examples can also be found in testHepMCIteration.cc.

As of HepMC 2.06.00, iterator range classes and methods are 
available for improved functionality.

%
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%

\subsection{HepMC::GenEvent::vertex\_iterator}

GenEvent::vertex\_iterator inherits from 
std::iterator<std::forward\_iterator\_tag,...>. 
It walks through all vertices in the event exactly once. It is robust and
fast, and provides the best way to loop over all vertices in the
event. For each event,
vertices\_begin() and vertices\_end() define the beginning and
one-past-the-end of the particle iterator respectively.

GenEventVertexRange( GenEvent\& ) is a wrapper for 
GenEvent::vertex\_iterator which provides begin() and end() for
ease of use with external fuctions, such as foreach.
GenEvent::vertex\_range() also provides this functionality.

%
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%

\subsection{HepMC::GenEvent::vertex\_const\_iterator}

A constant version of HepMC::GenEvent::vertex\_iterator, otherwise identical.

ConstGenEventVertexRange is the constant version of GenEventVertexRange.

%
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%

\subsection{HepMC::GenEvent::particle\_iterator}

GenEvent::particle\_iterator inherits from 
std::iterator<std::forward\_iterator\_tag,...>.
It walks through all particles in the
event exactly once. It is robust and fast, and provides the best way
to loop over all particles in the event. For each event,
particles\_begin() and particles\_end() define the beginning and
one-past-the-end of the particle iterator respectively.

GenEventParticleRange( GenEvent\& ) is a wrapper for
GenEvent::particle\_iterator which provides begin() and end() for
ease of use with external fuctions, such as foreach.
GenEvent::particle\_range() also provides this functionality.

%
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%

\subsection{HepMC::GenEvent::particle\_const\_iterator}

A constant version of HepMC::GenEvent::particle\_iterator, otherwise
identical.

ConstGenEventParticleRange is the constant version of GenEventParticleRange.

%
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%

\subsection{HepMC::GenVertex::vertex\_iterator}
\begin{myitemize}{Notes and Conventions}
  \item the iterator range must be specified to instantiate -
    choices are: parents, children, family, ancestors, descendants,
    and relatives
  \item note: iterating over all ancestors and all descendents is {\it
      not} necessarily equivalent to all relatives - this is consitent
    with the range definitions
\end{myitemize}

GenVertex::vertex\_iterator differs from GenEvent::vertex\_iterator
in that it has both a starting point and a range. The starting point
is the vertex - called the root - from which the iterator was
instantiated, and the range is defined relative to this point.
The possible ranges are defined by an enumeration called
HepMC::IteratorRange and the possibilities are:
\begin{itemize}\setlength{\itemsep}{0pt}
  \myitem{parents}{walks over all vertices connected to the root via
    incoming particles}
  \myitem{children}{walks over all vertices connected to the root via
    outgoing particles}
  \myitem{family}{walks over all vertices connected to the root via
    incoming or outgoing particles}
  \myitem{ancestors}{walks over all vertices connected to the root via
    any number of incoming particle edges - i.e. returns the parents,
    grandparents, great-grandparents, \ldots}
  \myitem{descendants}{walks over all vertices connected to the root via
    any number of outgoing particle edges - i.e. returns the children,
    grandchildren, great-grandchildren, \ldots}
  \myitem{relatives}{walks over all vertices belonging to the same
    particle/vertex graph structure as the root}
\end{itemize}

The iterator algorithm traverses the graph by converting it to a tree
(by ``chopping'' the edges at the point where a closed cycle connects
to an already visited vertex) and returning the vertices in post
order. The iterator requires more logic than the
GenEvent::vertex\_iterator and thus access time is slower (the
required to return one vertex goes like $\log n$ where $n$ is the
number of vertices already returned by the iterator).

GenVertex::vertex\_iterator allows the user to step into a specific part
of a particle/vertex graph and obtain targetted information about it. 

%
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%

\subsection{HepMC::GenVertex::particle\_iterator}
\begin{myitemize}{Notes and Conventions}
  \item the iterator range must be specified to instantiate -
    choices are: parents, children, family, ancestors, descendants,
    and relatives 
\end{myitemize}

GenVertex::particle\_iterator behaves exactly like
GenVertex::vertex\_iterator, with the exception that it returns particles
rather than vertices.  As a particle defines an edge or line (rather
than a point) in the particle/vertex graph, it is intuitive to define
the particle\_iterator relative to a vertex (point in the graph) - thus
the starting point (root) is still a vertex, and the range is defined
relative to this root.  The extension to particles can be made by
using the particle's production or end vertex as the root.  Possible
ranges are defined by an enumeration called HepMC::IteratorRange.
The possibilities are:
\begin{itemize}\setlength{\itemsep}{0pt}
  \myitem{parents}{walks over all particles incoming to the root}
  \myitem{children}{walks over all particles outgoing from the root}
  \myitem{family}{walks over all particles incoming or outgoing from
  the root} 
  \myitem{ancestors}{walks over all incoming particles or particles
  incoming to ancestor vertices of the root - i.e. returns the parents,
    grandparents, great-grandparents, \ldots}
  \myitem{descendants}{walks over all outgoing particles or particles
    outgoing to descendant vertices of the root - i.e. returns the children,
    grandchildren, great-grandchildren, \ldots}
  \myitem{relatives}{walks over all particles belonging to the same
    particle/vertex graph structure as the root}
\end{itemize}

The class is composed of a GenVertex::vertex\_iterator - 
and the same considerations apply.

GenVertexParticleRange( GenVertex\&, IteratorRange ) is a wrapper for
GenVertex::particle\_iterator which provides begin() and end() for
ease of use with external fuctions, such as foreach.
If the HepMC::IteratorRange is unspecified, it defaults to "relatives".
GenVertex::particles( IteratorRange ) also provides this functionality.

Also provided, are GenParticleProductionRange( GenParticle\&, IteratorRange )
and GenParticleEndRange( GenParticle\&, IteratorRange ), 
which iterate over the GenParticle's production or end vertex.  
If the vertex is undefined, begin() and end() will throw a std::range\_error.
If the HepMC::IteratorRange is unspecified, it defaults to "relatives".
GenVertex::particles\_in( GenParticle\&, IteratorRange ),
GenVertex::particles\_out( GenParticle\&, IteratorRange ),
GenParticle::particles\_in( IteratorRange ), and
GenParticle::particles\_out( IteratorRange ) also provide this functionality.

%
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%

\section{Ascii Output}
\label{iogenevent}

Ascii output uses begin and end keys to denote blocks of events.
The HepMC version is written immediately before the begin key, but 
is not part of the event block.

Within a block of events, each line of information begins with a 
single character key denoting the information found on the line.

General GenEvent information is followed by a list of vertices 
and associated particles.  The count of vertices is expected to match the 
number of vertices specified in the general event information.
Each vertex line specifies how many particle lines are associated 
with the vertex.

As of HepMC 2.05, it is possible to read and write events directly
with the streaming I/O operators $>>$ and $<<$ instead of using IO\_GenEvent.  
However, the HepMC event block header and footer will not be written 
automatically if this method is used.  The user must call 
write\_HepMC\_IO\_block\_begin and write\_HepMC\_IO\_block\_end explicitly.
IO\_GenEvent uses these operators internally.

We describe the Ascii output here, which persists all information
contained in a HepMC GenEvent.

%
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%

\subsection{Basic IO\_GenEvent Structure}

\begin{myitemize}{Block Keys}
  \myitem{begin event block}{HepMC::IO\_GenEvent-START\_EVENT\_LISTING} 
  \myitem{end event block}{HepMC::IO\_GenEvent-END\_EVENT\_LISTING} 
\end{myitemize}
\begin{myitemize}{Line Keys}
  \myitem{E}{general GenEvent information} 
  \myitem{N}{named weights} 
  \myitem{U}{momentum and position units} 
  \myitem{C}{GenCrossSection information:
             This line will appear ONLY if GenCrossSection is defined.} 
  \myitem{H}{HeavyIon information:  
             This line will contain zeros if there is no associated HeavyIon object.} 
  \myitem{F}{PdfInfo information: 
             This line will contain zeros if there is no associated PdfInfo object.} 
  \myitem{V}{GenVertex information} 
  \myitem{P}{GenParticle information} 
\end{myitemize}

Note that the E, N, U, C, H, and F lines contain event header information.
There will be one and only one of these lines per event.
Other lines with keys not specified above may be interspersed with the header 
information.
The N, U, C, H, and F lines must lie between the E line and the first V line
for each event.  N, U, C, H, and F lines can appear in any order.
The header information is followed immediately by a V (vertex) line.
Each vertex line is immediately followed by the P (particle) lines 
for particles associated with that vertex.  
For purposes of IO, particles are associated with a vertex if they
are in the list of outgoing particles.
In addition, if an incoming particle is not an outgoing particle of 
some other vertex, then it is classified as an "orphan" incoming particle
and associated with the vertex IO.
In this way, each particle appears only once in the Ascii listing.
An example of the basic format written to a file is shown in Figure~\ref{ascii_format}.
See Figure~\ref{ascii_stream} for an example of streaming ouput and 
Figure~\ref{ascii_cross} for an example with GenCrossSection information.

\begin{figure}[h]
  \begin{center}
{\tiny \begin{verbatim}
HepMC::Version 2.06.00
HepMC::IO_GenEvent-START_EVENT_LISTING
E 9 51 -1.0000000000000000e+00 -1.0000000000000000e+00 -1.0000000000000000e+00 20 0 309 1 2 0 4 2.3000000000000001e-01 3.4000000000000002e-01 1.1000000000000000e-01 6.5000000000000002e-02
N 4 "0" "1" "2" "3" 
U GEV MM
H 23 11 12 15 3 5 0 0 0 1.4499999582767487e-02 0 0 0
F 2 3 3.5000000000000003e-01 6.4999999999999991e-01 8.4499999999999993e+00 2.4499999779912355e+03 4.5499999591265787e+03 230 230
V -1 0 0 0 0 0 1 3 0
P 1 2212 0 0 6.9999999371178146e+03 7.0000000000000000e+03 9.3827000000000005e-01 3 0 0 -1 0
P 3 21 -9.5802904850995474e-01 3.4892974578914365e-01 1.5677975928920182e+01 1.5711094833049845e+01 0 3 0 0 -3 0
P 12 2101 2.5787537037233477e-01 -1.1110299643709216e-01 1.2403958218239170e+03 1.2403959888942973e+03 5.7933000000000001e-01 2 0 0 -9 0
P 25 2 7.0015367813761997e-01 -2.3782674935205150e-01 2.3333682308044050e+00 2.4698753078332274e+00 3.3000000000000002e-01 2 0 0 -15 0
V -2 0 0 0 0 0 1 2 0
P 2 2212 0 0 -6.9999999371178146e+03 7.0000000000000000e+03 9.3827000000000005e-01 3 0 0 -2 0
P 4 1 2.7745239600449745e-01 -1.8469236508822412e-01 -1.2668437617555701e+03 1.2668438056011901e+03 0 3 0 0 -4 0
P 116 2203 -2.7745239600449745e-01 1.8469236508822412e-01 -1.8910900158159372e+03 1.8910902024916190e+03 7.7132999999999996e-01 2 0 0 -15 0
\end{verbatim}}
  \end{center}
  \caption[Example of ascii format]
          {\label{ascii_format} Example of the format written to a file.  
           Only the first few lines are shown. 
	   Notice that this event has no GenCrossSection information. }
\end{figure}

\begin{figure}[h]
  \begin{center}
{\tiny \begin{verbatim}
HepMC::Version 2.06.00
HepMC::IO_GenEvent-START_EVENT_LISTING
E 1 65 -1.0000000000000000e+00 -1.0000000000000000e+00 -1.0000000000000000e+00 20 0 357 1 2 0 3 3.4560000000000002e-01 9.8595999999999995e-01 9.8563000000000001e-01
N 3 "0" "second weight name" "weightName" 
U GEV MM
C 3.3260000000000000e-03 1.0000000000000000e-04
V -1 0 0 0 0 0 1 3 0
P 1 2212 0 0 6.9999999371178146e+03 7.0000000000000000e+03 9.3827000000000005e-01 3 0 0 -1 0
P 3 -1 7.2521029125687850e-02 4.0916270130125820e-01 2.3327360517627892e+02 2.3327397528518750e+02 0 3 0 0 -3 0
P 11 2214 -1.1686660480579378e-01 -8.5929732056936881e-03 6.3364496390829606e+02 6.3364619182056367e+02 1.2419302372801875e+00 2 0 0 -25 0
P 91 1 4.4345575680105935e-02 -4.0056972809556451e-01 6.4508531915990204e+02 6.4508552945967551e+02 3.3000000000000002e-01 2 0 0 -26 0
V -2 0 0 0 0 0 1 2 0
P 2 2212 0 0 -6.9999999371178146e+03 7.0000000000000000e+03 9.3827000000000005e-01 3 0 0 -2 0
P 4 2 7.8470425410496383e-02 3.2223590540096692e-01 -1.4955117837986219e+01 1.4958794842314219e+01 0 3 0 0 -4 0
P 95 2103 -7.8470425410496383e-02 -3.2223590540096692e-01 -3.0233822815549665e+03 3.0233823981369064e+03 7.7132999999999996e-01 2 0 0 -28 0
\end{verbatim}}
  \end{center}
  \caption[Example of ascii format]
          {\label{ascii_cross} Example of the format written to a file
	   when GenCrossSection and named weights are used.
           Only the first few lines are shown. 
	   Notice that the HeavyIon line was not written because it contained
	   no information. }
\end{figure}

\begin{figure}[h]
  \begin{center}
{\tiny \begin{verbatim}
E 1 65 -1.0000000000000000e+00 -1.0000000000000000e+00 -1.0000000000000000e+00 20 0 357 1 2 0 0
U GEV MM
F 2 3 3.5000000000000003e-01 6.4999999999999991e-01 8.4499999999999993e+00 2.4499999779912355e+03 4.5499999591265787e+03 230 230
V -1 0 0 0 0 0 1 3 0
P 1 2212 0 0 6.9999999371178146e+03 7.0000000000000000e+03 9.3827000000000005e-01 3 0 0 -1 0
P 3 -1 7.2521029125687850e-02 4.0916270130125820e-01 2.3327360517627892e+02 2.3327397528518750e+02 0 3 0 0 -3 0
P 11 2214 -1.1686660480579378e-01 -8.5929732056936881e-03 6.3364496390829606e+02 6.3364619182056367e+02 1.2419302372801875e+00 2 0 0 -25 0
P 91 1 4.4345575680105935e-02 -4.0056972809556451e-01 6.4508531915990204e+02 6.4508552945967551e+02 3.3000000000000002e-01 2 0 0 -26 0
V -2 0 0 0 0 0 1 2 0
P 2 2212 0 0 -6.9999999371178146e+03 7.0000000000000000e+03 9.3827000000000005e-01 3 0 0 -2 0
P 4 2 7.8470425410496383e-02 3.2223590540096692e-01 -1.4955117837986219e+01 1.4958794842314219e+01 0 3 0 0 -4 0
P 95 2103 -7.8470425410496383e-02 -3.2223590540096692e-01 -3.0233822815549665e+03 3.0233823981369064e+03 7.7132999999999996e-01 2 0 0 -28 0
V -3 0 0 0 0 0 0 1 0
P 5 -1 4.5914398456298945e-02 2.5904843777716324e-01 1.4768981337590043e+02 1.4769004769866316e+02 0 3 0 0 -5 0
\end{verbatim}}
  \end{center}
  \caption[Example of ascii format]
          {\label{ascii_stream} Example of the streaming output format.
           Only the first few lines are shown. 
	   Notice that the streaming output does not automatically
	   write the IO\_GenEvent begin and end block lines.
	   The user may optionally choose to add those "headers" to the 
	   output stream. }
\end{figure}

\clearpage

%
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%

\subsection{General Event Information}

\begin{myitemize}{E - general GenEvent information} 
  \myitem{int}{event number} 
  \myitem{int}{number of multi paricle interactions} 
  \myitem{double}{event scale} 
  \myitem{double}{alpha QCD} 
  \myitem{double}{alpha QED} 
  \myitem{int}{signal process id} 
  \myitem{int}{barcode for signal process vertex} 
  \myitem{int}{number of vertices in this event} 
  \myitem{int}{barcode for beam particle 1} 
  \myitem{int}{barcode for beam particle 2} 
  \myitem{int}{number of entries in random state list (may be zero)} 
  \myitem{long}{optional list of random state integers} 
  \myitem{int}{number of entries in weight list (may be zero)} 
  \myitem{double}{optional list of weights} 
\end{myitemize}
\begin{myitemize}{N - weight names} 
  \myitem{int}{number of entries in weight name list.  
               Note that the number of entries here and on the E line are
	       required to be exactly the same and in the same order.} 
  \myitem{std::string}{list of weight names enclosed in quotes}
\end{myitemize}
\begin{myitemize}{U - momentum and position units} 
  \myitem{std::string}{momentum units (MEV or GEV)}
  \myitem{std::string}{length units (MM or CM)}
\end{myitemize}
\begin{myitemize}{C - GenCrossSection information} 
  \myitem{double}{cross section in pb}
  \myitem{double}{error associated with this cross section in pb}
\end{myitemize}
\begin{myitemize}{H - HeavyIon information} 
  \myitem{int}{Number of hard scatterings}
  \myitem{int}{Number of projectile participants}
  \myitem{int}{Number of target participants}
  \myitem{int}{Number of NN (nucleon-nucleon) collisions}
  \myitem{int}{Number of spectator neutrons}
  \myitem{int}{Number of spectator protons}
  \myitem{int}{Number of N-Nwounded collisions}
  \myitem{int}{Number of Nwounded-N collisons}
  \myitem{int}{Number of Nwounded-Nwounded collisions}
  \myitem{float}{Impact Parameter(fm) of collision}
  \myitem{float}{Azimuthal angle of event plane}
  \myitem{float}{eccentricity of participating nucleons in the transverse plane}
  \myitem{float}{nucleon-nucleon inelastic cross-section}
\end{myitemize}
\begin{myitemize}{F - PdfInfo information} 
  \myitem{int}{flavour code of first parton}
  \myitem{int}{flavour code of second parton}
  \myitem{double}{fraction of beam momentum carried by first parton}
  \myitem{double}{fraction of beam momentum carried by second parton}
  \myitem{double}{Q-scale used in evaluation of PDF's (in GeV)}
  \myitem{double}{x*f(x) for id1, x1, Q}
  \myitem{double}{x*f(x) for id2, x2, Q}
  \myitem{int}{LHAPDF set id of first parton (zero by default)}
  \myitem{int}{LHAPDF set id of second parton  (zero by default)}
\end{myitemize}

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\subsection{Vertices and Particles}

\begin{myitemize}{V - GenVertex information} 
  \myitem{int}{barcode}
  \myitem{int}{id}
  \myitem{double}{x}
  \myitem{double}{y}
  \myitem{double}{z}
  \myitem{double}{ctau}
  \myitem{int}{number of "orphan" incoming particles}
  \myitem{int}{number of outgoing particles}
  \myitem{int}{number of entries in weight list (may be zero)} 
  \myitem{double}{optional list of weights} 
\end{myitemize}
\begin{myitemize}{P - GenParticle information} 
  \myitem{int}{barcode}
  \myitem{int}{PDG id}
  \myitem{double}{px}
  \myitem{double}{py}
  \myitem{double}{pz}
  \myitem{double}{energy}
  \myitem{double}{generated mass}
  \myitem{int}{status code}
  \myitem{double}{Polarization theta}
  \myitem{double}{Polarization phi}
  \myitem{int}{barcode for vertex that has this particle as an incoming particle}
  \myitem{int}{number of entries in flow list (may be zero)}
  \myitem{int, int}{optional code\_index and code for each entry in the flow list}
\end{myitemize}

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\section{Building HepMC}

Source code, binary and source code tarballs, bug tracking, etc. are
all available from the HepMC web pages~\cite{LCGHepMC} at  
\htmladdnormallink
{https://savannah.cern.ch/projects/hepmc/}
{https://savannah.cern.ch/projects/hepmc/}.

Source code tarballs are on the download page:
\htmladdnormallink
{http://lcgapp.cern.ch/project/simu/HepMC/download/}
{http://lcgapp.cern.ch/project/simu/HepMC/download/}.
Binary downloads are available for some releases.
The following recipe is a guideline and should be modified according to taste.

\begin{myitemize}{}
  \myitem{download source code tarball}{}
  \myitem{mkdir cleanDIR}{Make a new directory to work in.}
  \myitem{cd cleanDIR}{}
  \myitem{tar -xzf HepMCtarball}{Unwind the tarball you downloaded.}
  \myitem{mkdir build install}{Define directories for building and installation.}
  \myitem{cd build}{This is your real working directory.}
  \myitem{../../HepMC-release/configure --prefix=../install
          --with-momentum=XX --with-length=YY}
    {--prefix tells the tools where to install the library and headers.
     The default install location is /usr/local.}
  \myitem{make}{Compile HepMC.}
  \myitem{make check}{Run the tests.  This is optional but strongly recommended.}
  \myitem{make install}{Install everything in your specified directory. }
\end{myitemize}

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\section{Examples}
\label{examples}
Examples are provided in the examples directory of the package 
and are installed in the installation directory under examples/HepMC.
Tests, found in the test directory of the package, also provide useful examples.
The tests are not installed.
Most examples use IO\_GenEvent.
However, example\_PythiaStreamIO.cc illustrates explicit use of the 
streaming I/O operators.

\begin{itemize}\setlength{\itemsep}{0pt}
  \item{\bf Using the HepMC vertex and particle iterators:}
       {example\_UsingIterators.cc} 
  \item{\bf Using HepMC with Pythia (Fortran):}
      {example\_MyPythia.cc and example\_MyPythiaOnlyToHepMC.cc}
  \item{\bf An Event Selection with Pythia Events:}
      {example\_MyPythia.cc}
  \item{\bf Event Selection and Ascii IO}
      {example\_EventSelection.cc}
  \item{\bf Using HepMC with Herwig:}
     {example\_MyHerwig.cc}
 \item{\bf Write an event file and then read it:}
     {example\_MyPythia.cc}
 \item{\bf Write an event file and then read it with the streaming I/O operators:}
     {example\_PythiaStreamIO.cc}
  \item{\bf Building an Event from Scratch in the HepMC Framework:}
     {example\_BuildEventFromScratch.cc}
  \item{\bf Verify that copying generated events behaves as expected:}
     {testHerwigCopies.cc and testPythiaCopies.cc}
  \item{\bf Using the iterator range classes and methods:}
     {HepMC/test/testHepMCIteration.cc}
\end{itemize}

I/O examples are shown in Figures 
\ref{read_ascii}, \ref{write_ascii}.
\ref{read_stream}, and \ref{write_stream}.

\begin{figure}[h]
\caption[IO\_GenEvent example]{\label{read_ascii} 
         Reading HepMC events from a file. }
    {\small \begin{verbatim}
    // specify an input file
    HepMC::IO_GenEvent ascii_in("example.dat",std::ios::in);
    // get the first event
    HepMC::GenEvent* evt =  ascii_in.read_next_event();
    // loop until we run out of events
    while ( evt ) {
        // analyze the event
        ...
        // delete the created event from memory
        delete evt;
        // read the next event
        ascii_in >> evt;
    }
    \end{verbatim}}
\end{figure}

\begin{figure}[h]
\caption[Streaming input example]{\label{read_stream} 
           Reading HepMC events from an input stream. }
{\small \begin{verbatim}
    // specify an input stream
    std::ifstream is( "example_PythiaStreamIO_write.dat" );
    // create an empty event
    HepMC::GenEvent evt;
    // loop over the input stream
    while ( is ) {
        // read the event
        evt.read( is );
        // make sure we have a valid event
        if( evt.is_valid() ) {
            // analyze the event
            ...
        }
    }
\end{verbatim}}
\end{figure}

\begin{figure}[h]
\caption[IO\_HEPEVT and IO\_GenEvent example]
{\label{write_ascii} Convert events from the HEPEVT common block 
          to HepMC format and write them to a file. }
{\small \begin{verbatim}
    // common block conversion methods
    HepMC::IO_HEPEVT hepevtio;
    // specify an output file
    HepMC::IO_GenEvent ascii_out("example.dat",std::ios::out);
    for ( int i = 1; i <= maxEvents; i++ ) {
        // convert an event
        HepMC::GenEvent* evt = hepevtio.read_next_event();
        // analyze the event
        ...
        // write the HepMC event
        ascii_out << evt;
        // delete the created event from memory
        delete evt;
    }
    \end{verbatim}}
\end{figure}

\begin{figure}[h]
\caption[IO\_HEPEVT and streaming output example]
{\label{write_stream} Convert events from the HEPEVT common block 
          to HepMC format and write them to streaming output. }
    {\small \begin{verbatim}
    // common block conversion methods
    HepMC::IO_HEPEVT hepevtio;
    // specify an output stream
    std::ofstream os( "example_PythiaStreamIO_write.dat" );
    for ( int i = 1; i <= maxEvents; i++ ) {
        // generate the event with Pythia, Herwig, etc.
        ...
        // convert an event
        HepMC::GenEvent* evt = hepevtio.read_next_event();
        // analyze the event
        ...
        // write the HepMC event
        evt->write(os);
        // delete the created event from memory
        delete evt;
    }
\end{verbatim}}
\end{figure}

\clearpage

%
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\section{Deprecated Classes}
\label{deprecated}

Two major classes have been deprecated: IO\_Ascii and ParticleData.
IO\_Ascii was deprecated in 2.02.00 and was removed as of HepMC 2.05.00.
IO\_Ascii has been replaced by IO\_GenEvent, 
which uses iostreams instead of files.

The ParticleData classes, deprecated since HepMC 2.02.00, 
had become outmoded and would need a lot of work.  
The ParticleData classes were removed as of HepMC 2.06.00.
Instead, we recommend using packages already developed for this
purpose, such as HepPDT~\cite{heppdt}.

IO\_ExtendedAscii, introduced in 1.28.00, was deprecated in 2.02.00 
and removed as of HepMC 2.04.00.

IO\_GenEvent and the streaming input operator can read old files written by 
either IO\_Ascii or IO\_ExtendedAscii.


%
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\section{Acknowlegements}

We would like to acknowlege useful suggestions, consultations, and
comments from: Ian Hinchliffe, Pere Mato, H.T. Phillips, Anders Ryd,
Maria Smizanska, and Brian Webber.  R.D.\ Schaffer and Lassi
Tuura provided many useful suggestions on the package architecture.
Thanks to Witold Pokorski and Pere Mato for providing the fixes that
make HepMC compile and run on Windows with Microsoft Visual C++.


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\begin{thebibliography}{99}

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\bibitem{Torbjorn}
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\bibitem{Richardson}
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\bibitem{Boos:2001cv}
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\bibitem{lcgsim}
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\bibitem{changelog}
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\bibitem{stl}
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\bibitem{Sjostrand:2001yb}
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\bibitem{herwig}
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\bibitem{lhapdf}
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\bibitem{evtgen}
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\bibitem{Yao:2006tx}
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\bibitem{stdhep5.05}
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\bibitem{heppdt}
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\bibitem{mcnet}
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\end{thebibliography}

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\end{document}