File: sam.lang

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Description="Sequence Alignment Map (use with sam_seq.lua plug-in)"

Categories = {"source"}

--Digits = [[ (?:0x|0X|0b)[0-9a-fA-F']+|\d*[\.]?\d+(?:[eE][\-\+]\d+)?[lLuU]* ]]

Keywords={

    { Id=1,
    Regex=[[(SRR|SNES)\d+\.\d+]], Group=0
    },
    { Id=2,
    Regex=[[chr\d+]]
    },

    { Id=3,
    Regex=[[\d+[DMS][DM\d]*]]
    },

    { Id=2,
    Regex=[[ [ASXNMDOGYTR]{2}\: ]]
    },

    { Id=5,
    Regex=[[ [ATCG]{64,} ]]
    },

    { Id=4,
    Regex=[[ [\S]{100,} ]]
    }
}

Comments = {
    {
    Block=false,
    Delimiter = { [[^@]] }
    }
}

IgnoreCase=false

Operators=[[\(|\)|\[|\]|\{|\}|\,|\;|\.|\:|\&|<|>|\!|=|\/|\*|\%|\+|\-|\~|\||\^|\?]]