package info (click to toggle)
hisat2 2.1.0-2
  • links: PTS, VCS
  • area: main
  • in suites: bullseye, buster, sid
  • size: 13,756 kB
  • sloc: cpp: 86,309; python: 12,230; sh: 2,171; perl: 936; makefile: 375

Folder: scripts

d .. (parent)
- - rwxr-xr-x 3,378 convert_quals.pl
- - rwxr-xr-x 3,038 gen_2b_occ_lookup.pl
- - rwxr-xr-x 6,672 gen_occ_lookup.pl
- - rwxr-xr-x 2,068 gen_solqual_lookup.pl
- - rwxr-xr-x 4,107 infer_fraglen.pl
- - rwxr-xr-x 1,192 make_a_thaliana_tair.sh
- - rwxr-xr-x 1,466 make_b_taurus_UMD3.sh
- - rwxr-xr-x 1,506 make_bdgp6.sh
- - rwxr-xr-x 2,609 make_bdgp6_tran.sh
- - rwxr-xr-x 1,322 make_canFam2.sh
- - rwxr-xr-x 954 make_ce10.sh
- - rwxr-xr-x 1,195 make_dm6.sh
- - rwxr-xr-x 1,099 make_e_coli.sh
- - rwxr-xr-x 1,518 make_grch37.sh
- - rwxr-xr-x 2,484 make_grch37_snp.sh
- - rwxr-xr-x 3,580 make_grch37_snp_tran.sh
- - rwxr-xr-x 3,849 make_grch37_snp_tran_ercc.sh
- - rwxr-xr-x 2,619 make_grch37_tran.sh
- - rwxr-xr-x 1,504 make_grch38.sh
- - rwxr-xr-x 2,449 make_grch38_snp.sh
- - rwxr-xr-x 3,550 make_grch38_snp_tran.sh
- - rwxr-xr-x 3,830 make_grch38_snp_tran_ercc.sh
- - rwxr-xr-x 2,600 make_grch38_tran.sh
- - rwxr-xr-x 1,378 make_grcm38.sh
- - rwxr-xr-x 2,344 make_grcm38_snp.sh
- - rwxr-xr-x 3,440 make_grcm38_snp_tran.sh
- - rwxr-xr-x 2,480 make_grcm38_tran.sh
- - rwxr-xr-x 1,288 make_hg19.sh
- - rwxr-xr-x 1,293 make_hg38.sh
- - rwxr-xr-x 2,070 make_hg38_allsnp.sh
- - rwxr-xr-x 2,076 make_hg38_snp.sh
- - rwxr-xr-x 1,292 make_hg38_snp_tran.sh
- - rwxr-xr-x 1,289 make_mm10.sh
- - rwxr-xr-x 1,895 make_mm9.sh
- - rwxr-xr-x 1,515 make_r64.sh
- - rwxr-xr-x 2,622 make_r64_tran.sh
- - rwxr-xr-x 1,978 make_rn4.sh
- - rwxr-xr-x 1,341 make_rn6.sh
- - rwxr-xr-x 1,506 make_rnor6.sh
- - rwxr-xr-x 2,612 make_rnor6_tran.sh
- - rwxr-xr-x 940 make_sc3.sh
- - rwxr-xr-x 1,510 make_wbcel235.sh
- - rwxr-xr-x 2,614 make_wbcel235_tran.sh
- - rwxr-xr-x 3,440 make_zm3_snp_tran_ercc.sh