File: hmmbuild-made1.out

package info (click to toggle)
hmmer 3.2.1%2Bdfsg-1
  • links: PTS, VCS
  • area: main
  • in suites: buster
  • size: 23,380 kB
  • sloc: ansic: 119,305; perl: 8,791; sh: 3,266; makefile: 1,871; python: 598
file content (14 lines) | stat: -rw-r--r-- 807 bytes parent folder | download 
1
2
3
4
5
6
7
8
9
10
11
12
13
14
 
# hmmbuild :: profile HMM construction from multiple sequence alignments
# HMMER 3.2.1 (June 2018); http://hmmer.org/
# Copyright (C) 2018 Howard Hughes Medical Institute.
# Freely distributed under the BSD open source license.
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
# input alignment file:             MADE1.sto
# output HMM file:                  MADE1.hmm
# - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

# idx name                  nseq  alen  mlen     W eff_nseq re/pos description
#---- -------------------- ----- ----- ----- ----- -------- ------ -----------
1     MADE1                  100   304    80   474     3.58  0.708 MADE1 (MAriner Derived Element 1), a TcMar-Mariner ...

# CPU time: 0.01u 0.00s 00:00:00.01 Elapsed: 00:00:00.01