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HMMER3/e [3.0 | March 2010]
NAME XYPPX
ACC PF02162.8
DESC XYPPX repeat
LENG 5
ALPH amino
RF no
CONS yes
CS no
MAP yes
DATE Thu Jun 16 11:48:52 2011
NSEQ 7
EFFN 7.000000
CKSUM 149732247
GA 14.30 0.70
TC 14.40 0.70
NC 14.20 4.00
STATS LOCAL MSV -5.1112 0.78852
STATS LOCAL VITERBI -4.7526 0.78852
STATS LOCAL FORWARD -2.5557 0.78852
HMM A C D E F G H I K L M N P Q R S T V W Y
m->m m->i m->d i->m i->i d->m d->d
COMPO 1.78915 6.00913 5.23249 5.11791 5.20653 2.22796 5.88594 5.77670 5.17236 5.27663 6.29854 5.19187 0.83219 2.40628 5.36874 4.33373 4.68171 5.20184 6.65125 2.09768
2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
0.00529 5.64135 6.36369 0.61958 0.77255 0.00000 *
1 0.91707 5.48468 5.65823 5.70004 6.37399 0.67196 6.42141 5.91783 5.81567 5.60504 6.35161 5.14615 5.14089 5.87323 5.80244 3.79498 4.17581 4.94514 7.64062 6.69238 1 G - -
2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
0.00529 5.64135 6.36369 0.61958 0.77255 0.48576 0.95510
2 1.29214 5.93727 5.64450 5.57968 3.89343 4.88067 5.29214 5.20374 5.53411 4.64869 5.82218 5.30271 5.60238 5.64395 5.57005 4.42103 4.74169 4.86331 5.54271 0.49105 2 Y - -
2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
0.00529 5.64135 6.36369 0.61958 0.77255 0.48576 0.95510
3 5.94672 7.11992 6.55030 6.62396 7.25663 5.73661 7.31745 7.48876 6.82943 6.72457 7.95279 6.80729 0.02290 7.12774 6.70449 6.20885 6.45690 6.95162 7.77702 7.45295 3 P - -
2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
0.00529 5.64135 6.36369 0.61958 0.77255 0.48576 0.95510
4 5.94672 7.11992 6.55030 6.62396 7.25663 5.73661 7.31745 7.48876 6.82943 6.72457 7.95279 6.80729 0.02290 7.12774 6.70449 6.20885 6.45690 6.95162 7.77702 7.45295 4 P - -
2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
0.00529 5.64135 6.36369 0.61958 0.77255 0.48576 0.95510
5 1.83526 5.65654 4.22930 4.02694 5.84734 4.24624 5.28601 5.33049 4.08818 4.90398 5.71607 4.35468 1.48546 0.81000 4.42096 3.73357 4.07553 4.71157 7.04231 5.78514 5 q - -
2.68618 4.42225 2.77519 2.73123 3.46354 2.40513 3.72494 3.29354 2.67741 2.69355 4.24690 2.90347 2.73739 3.18146 2.89801 2.37887 2.77519 2.98518 4.58477 3.61503
0.00356 5.63962 * 0.61958 0.77255 0.00000 *
//
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