1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
193
194
195
196
197
198
199
200
201
202
203
204
205
206
207
208
209
210
211
212
213
214
215
216
217
218
219
220
221
222
223
224
225
226
227
228
229
230
231
232
233
234
235
236
237
238
239
240
241
242
243
244
245
246
247
248
249
250
251
252
253
254
255
256
257
258
259
260
261
262
263
264
265
266
267
268
269
270
271
272
273
274
275
276
277
278
279
280
281
282
283
284
285
286
287
288
289
290
291
292
293
294
295
296
297
298
299
300
301
302
303
304
305
306
307
308
309
310
311
312
313
314
315
316
317
318
319
320
321
322
323
324
325
326
327
328
329
330
331
332
333
334
335
336
337
338
339
340
341
342
343
344
345
346
347
348
349
350
351
352
353
354
355
356
357
358
359
360
361
362
363
364
365
366
367
368
369
370
371
372
373
374
375
376
377
378
379
380
381
382
383
384
385
386
387
388
389
390
391
392
393
394
395
396
397
398
399
400
401
402
403
404
405
406
407
408
409
410
411
412
413
414
415
416
417
418
419
420
421
422
423
424
425
426
427
428
429
430
431
432
433
434
435
436
437
438
439
440
441
442
443
444
445
446
447
448
449
450
451
452
453
454
455
456
457
458
459
460
461
462
463
464
465
466
467
468
469
470
471
472
473
474
475
476
477
478
479
480
481
482
483
484
485
486
487
488
489
490
491
492
493
494
495
496
497
498
499
500
501
502
503
504
505
506
507
508
509
510
511
512
513
514
515
516
517
518
519
520
521
522
523
524
525
526
527
528
529
530
531
532
533
534
535
536
537
538
539
540
541
542
543
544
545
546
547
548
549
550
551
552
553
554
555
556
557
558
559
560
561
562
|
# STOCKHOLM 1.0
#=GF ID fn3
#=GF AC PF00041
#=GF DE Fibronectin type III domain
#=GF AU Sonnhammer ELL
#=GF GA 7.8 -1.0
#=GF TC 7.7 7.7
#=GF TC 7.9 0.1
#=GF AL HMM_simulated_annealing
#=GF SE Swissprot_feature_table
#=GF TP Domain
#=GF BM hmmbuild -F HMM_ls SEED
#=GF BM hmmcalibrate --seed 0 HMM_ls
#=GF BM hmmbuild -f -F HMM_fs SEED
#=GF BM hmmcalibrate --seed 0 HMM_fs
#=GF AM globalfirst
#=GF RN [1]
#=GF RM 90384924
#=GF RT Structural design and molecular evolution of a cytokine
#=GF RT receptor superfamily.
#=GF RA Bazan JF;
#=GF RL PNAS USA 1990;87:6934-6938.
#=GF RN [2]
#=GF RM 95106303
#=GF RT Tracing the spread of fibronectin type III domains in
#=GF RT bacterial glycohydrolases.
#=GF RA Little E, Bork P, Doolittle R;
#=GF RL J Mol Evol 1994;39:631-643.
#=GF RC Definition of fibronectin domains
#=GF RN [3]
#=GF RM 85284965
#=GF RT Primary structure of human fibronectin: differential
#=GF RT splicing may generate at least 10 polypeptides from a
#=GF RT single gene.
#=GF RA Kornblihtt AR, Umezawa K, Vibe-Pedersen K, Baralle FE;
#=GF RL EMBO J. 1985;4:1755-1759.
#=GF DR PROSITE; PDOC00214;
#=GF DR PRINTS; PR00014;
#=GF DR SCOP; 1ttf; sf;
#=GF DR SMART; FN3;
#=GF DR HOMSTRAD; fn3;
#=GF DC The following Pfam-B families contain sequences that according to Prodom
#=GF DC are members of this Pfam-A family.
#=GF DR PFAMB; PB001437;
#=GF DR PFAMB; PB004758;
#=GF DR PFAMB; PB007041;
#=GF DR PFAMB; PB007646;
#=GF DR PFAMB; PB012739;
#=GF DR PFAMB; PB016725;
#=GF DR PFAMB; PB016744;
#=GF DR PFAMB; PB018458;
#=GF DR PFAMB; PB019013;
#=GF DR PFAMB; PB019702;
#=GF DR PFAMB; PB020271;
#=GF DR PFAMB; PB021019;
#=GF DR PFAMB; PB026405;
#=GF DR PFAMB; PB029923;
#=GF DR PFAMB; PB033713;
#=GF DR PFAMB; PB034308;
#=GF DR PFAMB; PB047628;
#=GF DR PFAMB; PB049097;
#=GF DR PFAMB; PB052872;
#=GF DR PFAMB; PB063723;
#=GF DR PFAMB; PB073211;
#=GF DR PFAMB; PB073567;
#=GF DR PFAMB; PB073869;
#=GF DR PFAMB; PB073994;
#=GF DR PFAMB; PB074195;
#=GF DR PFAMB; PB074218;
#=GF DR PFAMB; PB074322;
#=GF DR PFAMB; PB074352;
#=GF DR PFAMB; PB074375;
#=GF DR PFAMB; PB074967;
#=GF DR PFAMB; PB075286;
#=GF DR PFAMB; PB075336;
#=GF DR PFAMB; PB075604;
#=GF DR PFAMB; PB075661;
#=GF DR PFAMB; PB075739;
#=GF DR PFAMB; PB075827;
#=GF DR PFAMB; PB076019;
#=GF DR PFAMB; PB076058;
#=GF DR PFAMB; PB076103;
#=GF DR PFAMB; PB076165;
#=GF DR PFAMB; PB076280;
#=GF DR PFAMB; PB076339;
#=GF DR INTERPRO; IPR003961;
#=GF DR PDB; 1qg3 A; 1220; 1310;
#=GF DR PDB; 1qg3 B; 1220; 1310;
#=GF DR PDB; 1qg3 A; 1127; 1208;
#=GF DR PDB; 1qg3 B; 1127; 1208;
#=GF DR PDB; 1cfb ; 717; 799;
#=GF SQ 108
#=GS EPA1_HUMAN/333-435 AC P21709
#=GS EPA2_HUMAN/329-420 AC P29317
#=GS EPA3_CHICK/325-421 AC P29318
#=GS EPB2_CHICK/326-422 AC P28693
#=GS NRCA_CHICK/623-709 AC P35331
#=GS MYPF_CHICK/630-716 AC P16419
#=GS MPSF_CHICK/801-887 AC Q02173
#=GS MPSF_CHICK/699-785 AC Q02173
#=GS MPSF_CHICK/499-585 AC Q02173
#=GS MPSF_CHICK/371-457 AC Q02173
#=GS KMLS_CHICK/1318-1403 AC P11799
#=GS AXO1_CHICK/602-692 AC P28685
#=GS MPSF_CHICK/600-684 AC Q02173
#=GS LAR_DROME/322-404 AC P16621
#=GS MYPF_CHICK/923-1008 AC P16419
#=GS TIE1_HUMAN/644-729 AC P35590
#=GS NCA1_BOVIN/509-597 AC P31836
#=GS EPA4_MOUSE/441-525 AC Q03137
#=GS EPB2_CHICK/437-521 AC P28693
#=GS NRCA_CHICK/928-1014 AC P35331
#=GS LAR_DROME/909-995 AC P16621
#=GS ITB4_HUMAN/1641-1728 AC P16144
#=GS ITB4_HUMAN/1528-1612 AC P16144
#=GS ITB4_HUMAN/1220-1310 AC P16144
#=GS PTP9_DROME/171-259 AC P35832
#=GS LAR_DROME/709-800 AC P16621
#=GS LAR_DROME/417-503 AC P16621
#=GS EPA2_HUMAN/436-519 AC P29317
#=GS ITB4_HUMAN/1127-1208 AC P16144
#=GS CONT_CHICK/799-884 AC P14781
#=GS AXO1_CHICK/807-896 AC P28685
#=GS CAML_HUMAN/812-907 AC P32004
#=GS PTP1_DROME/958-1044 AC P35992
#=GS NRG_DROME/917-1007 AC P20241
#=GS TENA_CHICK/1494-1571 AC P10039
#=GS TENA_CHICK/956-1033 AC P10039
#=GS TENA_CHICK/1406-1483 AC P10039
#=GS TENA_CHICK/774-853 AC P10039
#=GS TENA_CHICK/1317-1395 AC P10039
#=GS FINC_BOVIN/1327-1406 AC P07589
#=GS FINC_RAT/1266-1346 AC P04937
#=GS TENA_CHICK/864-945 AC P10039
#=GS FINC_BOVIN/780-858 AC P07589
#=GS FINC_BOVIN/1782-1861 AC P07589
#=GS FINC_BOVIN/1417-1499 AC P07589
#=GS FINC_BOVIN/1601-1680 AC P07589
#=GS FINC_BOVIN/1511-1590 AC P07589
#=GS FINC_BOVIN/875-955 AC P07589
#=GS TENA_CHICK/593-671 AC P10039
#=GS FINC_BOVIN/1693-1771 AC P07589
#=GS FINC_BOVIN/1142-1225 AC P07589
#=GS PTP1_DROME/405-485 AC P35992
#=GS FINC_BOVIN/1236-1316 AC P07589
#=GS PHB_ALCFA/344-418 AC P12625
#=GS CHIX_STROI/169-240 AC Q05638
#=GS CHIT_STRLI/142-219 AC P36909
#=GS GUNB_CELFI/651-733 AC P26225
#=GS CHI1_BACCI/465-542 AC P20533
#=GS APU_THETY/1165-1248 AC P16950
#=GS APU_THETY/928-1009 AC P16950
#=GS FINC_BOVIN/577-660 AC P07589
#=GS NRG_DROME/815-905 AC P20241
#=GS PTP6_DROME/332-425 AC P16620
#=GS FAS2_SCHAM/530-616 AC P22648
#=GS PTPZ_HUMAN/312-401 AC P23471
#=GS NCA1_BOVIN/610-691 AC P31836
#=GS FAS2_SCHAM/642-735 AC P22648
#=GS TIE2_HUMAN/543-626 AC Q02763
#=GS TENA_CHICK/682-767 AC P10039
#=GS UFO_HUMAN/327-411 AC P30530
#=GS TIE1_HUMAN/545-632 AC P35590
#=GS 7LES_DROME/1799-1891 AC P13368
#=GS NRG_DROME/717-799 AC P20241
#=GS NRCA_CHICK/726-810 AC P35331
#=GS NGCA_CHICK/700-794 AC Q03696
#=GS TIE2_HUMAN/639-724 AC Q02763
#=GS LAR_DROME/515-598 AC P16621
#=GS PTP6_DROME/236-321 AC P16620
#=GS TIE2_HUMAN/444-529 AC Q02763
#=GS TIE1_HUMAN/446-533 AC P35590
#=GS PTPK_MOUSE/290-376 AC P35822
#=GS PTPB_HUMAN/1355-1434 AC P23467
#=GS PTP1_DROME/583-661 AC P35992
#=GS PTP1_DROME/312-394 AC P35992
#=GS PTP1_DROME/217-301 AC P35992
#=GS PTP1_DROME/123-205 AC P35992
#=GS PTPB_HUMAN/1261-1344 AC P23467
#=GS PTP1_DROME/864-944 AC P35992
#=GS PTPB_HUMAN/1173-1250 AC P23467
#=GS PTPB_HUMAN/1085-1162 AC P23467
#=GS PTPB_HUMAN/467-543 AC P23467
#=GS PTPB_HUMAN/995-1074 AC P23467
#=GS PTPB_HUMAN/731-808 AC P23467
#=GS PTPB_HUMAN/643-725 AC P23467
#=GS PTPB_HUMAN/554-632 AC P23467
#=GS PTPB_HUMAN/907-984 AC P23467
#=GS PTPB_HUMAN/112-192 AC P23467
#=GS IL7R_HUMAN/129-221 AC P16871
#=GS FINC_BOVIN/689-768 AC P07589
#=GS KALM_CHICK/178-271 AC P33005
#=GS TENA_HUMAN/1529-1608 AC P24821
#=GS TENA_CHICK/1227-1306 AC P10039
#=GS TENA_CHICK/1136-1215 AC P10039
#=GS TENA_HUMAN/1255-1335 AC P24821
#=GS TENA_CHICK/1045-1124 AC P10039
#=GS 7LES_DROVI/1917-1997 AC P20806
#=GS PTPB_HUMAN/22-103 AC P23467
#=GS KALM_CHICK/544-642 AC P33005
#=GS ITB4_HUMAN/1220-1310 DR PDB; 1qg3 A; 1220; 1310;
#=GS ITB4_HUMAN/1220-1310 DR PDB; 1qg3 B; 1220; 1310;
#=GS ITB4_HUMAN/1127-1208 DR PDB; 1qg3 A; 1127; 1208;
#=GS ITB4_HUMAN/1127-1208 DR PDB; 1qg3 B; 1127; 1208;
#=GS NRG_DROME/717-799 DR PDB; 1cfb ; 717; 799;
EPA1_HUMAN/333-435 P.SAP.RNLSFSA...SGTQLSLRWEPPAD..TGGRQDVRYSVRCS..QC
EPA2_HUMAN/329-420 P.SAP.HYLTAVGM..GA.KVELRWTPPQD..SGGREDIVYSVTCEQCWP
EPA3_CHICK/325-421 P.SAP.RNV.ISNI..NETSVILDWSWPLD..TGGRKDVTFNIIC...KK
EPB2_CHICK/326-422 P.SAP.QAV.ISSV..NETSLMLEWTPPRD..SGGREDLVYNIIC...KS
NRCA_CHICK/623-709 P.NPP.LDLELTGQ..LERSIELSWVPGEE...NNSPITNFVIEY...ED
MYPF_CHICK/630-716 P.DPP.QSVRVTSV..GEDWAVLSWEAPPF..DGGMPITGYLMER...KK
MPSF_CHICK/801-887 P.GPA.YDLTVCEV..RNTSLVLLWKAPVY..EGKSPITGYLVDY...KE
MPSF_CHICK/699-785 P.SYP.HGITLLNC..DGHSMTLGWKAPKY..SGGSPILGYYIDKR...E
MPSF_CHICK/499-585 P.GPP.TNVHASEI..SKTYVVLSWDPPVP...RGREPLTYFIEK...SM
MPSF_CHICK/371-457 P.GAP.MDVKCHDA..NRDYVIVTWKPPNT..TSQNPVIGYFVDK...CE
KMLS_CHICK/1318-1403 P.DPPAGTPCASDI..RSSSLTLSWYGSSY..DGGSAVQSYTVEI...WN
AXO1_CHICK/602-692 PPGPP.GGVVVRDI..GDTTVQLSWSRGFD...NHSPIARYSIEAR...T
MPSF_CHICK/600-684 P.SAP.GRVVATRN..TKTSVVVQWDKPK....HEENLYGYYIDY...SV
LAR_DROME/322-404 P.TAP.TDVQISEV..TATSVRLEWSYK.....GPEDLQYYVIQY...KP
MYPF_CHICK/923-1008 P.GPP.QAVRVMEV..WGSNALLQWEPPKD..DGNAEISGYTVQK...AD
TIE1_HUMAN/644-729 P.PAP.RHLHAQAL..SDSEIQLTWKHPEA...LPGPISKYVVEV...QV
NCA1_BOVIN/509-597 P.SSP.SIDQVEP...YSSTAQVQFDEPEA..TGGVPILKYKAEWR...A
EPA4_MOUSE/441-525 P.SSI.ALVQAKEV..TRYSVALAWLEPDR...PNGVILEYEVKY...YE
EPB2_CHICK/437-521 P.SAV.SIMHQVSR..TVDSITLSWSQPDQ...PNGVILDYELQY...YE
NRCA_CHICK/928-1014 P.SPP.SFLKITNP..TLDSLTLEWGSPTH...PNGVLTSYILKF...QP
LAR_DROME/909-995 PGGPP.SNITIRFQ..TPDVLCVTWDPPTRE.HRNGIITRYDVQFH..KK
ITB4_HUMAN/1641-1728 P.SAP.GPLVFTAL..SPDSLQLSWERPRR...PNGDIVGYLVTC...EM
ITB4_HUMAN/1528-1612 P.DTP.TRLVFSAL..GPTSLRVSWQEPR....CERPLQGYSVEY...QL
ITB4_HUMAN/1220-1310 P.SEP.GRLAFNVV..SSTVTQLSWAEPAE...TNGEITAYEVCY...GL
#=GR ITB4_HUMAN/1220-1310 SS C.CCC.CEEEEEEC..CTTCCEEEEECCCS...CCCCEEEEEEEC...TT
#=GR ITB4_HUMAN/1220-1310 SA 6.221.36423442..44332211135347...864302212113...76
PTP9_DROME/171-259 P.SKP.QNLTILDV..SANSITMSWHPPKN...QNGAIAGYHVFH...IH
LAR_DROME/709-800 P.GDP.QDVKATPL..NSTSIHVSWKPPLEK.DRNGIIRGYHIHA...QE
LAR_DROME/417-503 E.SAP.RNVQVRTL..SSSTMVITWEPPET...PNGQVTGYKV.Y...YT
EPA2_HUMAN/436-519 Q.TEP.PKVRLEGR..STTSLSVSWSIPPP...QQSRVWKYEVTYR...K
ITB4_HUMAN/1127-1208 L.GAP.QNPNAKAA..GSRKIHFNWLPP......SGKPMGYRVKY...WI
#=GR ITB4_HUMAN/1127-1208 SS C.CCC.CEEEEEEC..CTTCCEEEEECC......CSCCCCEEEEE...EE
#=GR ITB4_HUMAN/1127-1208 SA 6.221.36423442..443322111353......47864302212...11
CONT_CHICK/799-884 PTEVP.TDVSVKVL..SSSEISVSWHHVT.....EKSVEGYQIRY...WA
AXO1_CHICK/807-896 PKVAP.FRVTAKAV..LSSEMDVSWEPVEQG.DMTGVLLGYEIRY...WK
CAML_HUMAN/812-907 P.QAI.PELEGIEIL.NSSAVLVKWRPVDLA.QVKGHLRGYNVTY...WR
PTP1_DROME/958-1044 P.GRV.ERFHPTDV..QPSEINFEWSLPSS..EANGVIRQFSIAY...TN
NRG_DROME/917-1007 P.SPV.QGLDAYPL..GSSAFMLHWKKPLY...PNGKLTGYKIYY...EE
TENA_CHICK/1494-1571 L.DAP.KDLSATEV..QSETAVITWRPP......RAPVTDYLLTY...ES
TENA_CHICK/956-1033 L.DNP.KDLEVSDP..TETTLSLRWRRP......VAKFDRYRLTY...VS
TENA_CHICK/1406-1483 L.DSP.SGLVVMNI..TDSEALATWQPA......IAAVDNYIVSY...SS
TENA_CHICK/774-853 L.DAP.SQIEAKDV..TDTTALITWSKP......LAEIEGIELTY...GP
TENA_CHICK/1317-1395 V.GSP.KGISFSDI..TENSATVSWTPP......RSRVDSYRVSY...VP
FINC_BOVIN/1327-1406 L.DSP.SGIDFSDI..TANSFTVHWIAP......RATITGYRIRHH...P
FINC_RAT/1266-1346 V.PQL.TDLSFVDI..TDSSIGLRWTPLN.....SSTIIGYRITV...VA
TENA_CHICK/864-945 L.DAP.RNLKRVSQ..TDNSITLEWKNS......HANIDNYRIKF...AP
FINC_BOVIN/780-858 P.DAP.PDPTVDQV..DDTSIVVRWSRP......RAPITGYRIVY...SP
FINC_BOVIN/1782-1861 I.DAP.SNLRFLAT..TPNSLLVSWQPP......RARITGYIIKY...EK
FINC_BOVIN/1417-1499 S.DVP.RDLEVIAA..TPTSLLISWDAP......AVTVRYYRITY...GE
FINC_BOVIN/1601-1680 I.PAP.TNLKFTQV..TPTSLTAQWTAP......NVQLTGYRVRV...TP
FINC_BOVIN/1511-1590 I.DKP.SQMQVTDV..QDNSISVRWLPS......SSPVTGYRVTT...AP
FINC_BOVIN/875-955 KVPPP.RDLQFVEV..TDVKITIMWTPP......ESPVTGYRVDV...IP
TENA_CHICK/593-671 V.SPP.TELTVTNV..TDKTVNLEWKHE.......NLVNEYLVTY...VP
FINC_BOVIN/1693-1771 V.SPP.RRARVTDA..TETTITISWRTK......TETITGFQVDA...IP
FINC_BOVIN/1142-1225 PLSPP.TNLHLEANP.DTGVLTVSWERST.....TPDITGYRITT...TP
PTP1_DROME/405-485 P.LPV.RNLRSINDD.KTNTMIITWEADP.....ASTQDEYRIVYHE.LE
FINC_BOVIN/1236-1316 V.PPP.TDLRFTNV..GPDTMRVTWAPPS.....SIELTNLLVRY...SP
PHB_ALCFA/344-418 G.SAP.TGLAVTAT..TSTSVSLSWNAV.......ANASSYGV.YR....
CHIX_STROI/169-240 P.PAPPTGLRTGSV..TATSVALSWSPV.......TGATGYAV.YR....
CHIT_STRLI/142-219 P.SAP.GTPTASNI..TDTSVKLSWSAAT....DDKGVKNYDV.LR....
GUNB_CELFI/651-733 P.TTP.GTPVATGV..TTVGASLSWAASTD...AGSGVAGYEL.YR...V
CHI1_BACCI/465-542 P.SVP.GNARSTGV..TANSVTLAWNAST....DNVGVTGYNV.YN....
APU_THETY/1165-1248 P.TAP.V.LQQPGI..ESSRVTLNWSPSA....DDVAIFGYEIYK...SS
APU_THETY/928-1009 A.PQPITDLKAVS...GNGKVDLSWSVV.......DKAVSYNI.YR...S
FINC_BOVIN/577-660 T.SGP.VQVIITETPSQPNSHPIQWSAPE.....SSHISKYILRW...KP
NRG_DROME/815-905 PLDAP.TNFTMRQIT.SSTSGYMAWTPVSEE.SVRGHFKGYKIQT...WT
PTP6_DROME/332-425 Y.DPI.FIPKVETTGSTASTITIGWNPPPP..DLIDYIQYYELIV...SE
FAS2_SCHAM/530-616 P.SAV.LQVKMDVM..TATTVTFKFFGPGN..DGGLPTKNYAVQY...KQ
PTPZ_HUMAN/312-401 S.SEP.ENVQADPE..NYTSLLVTWERPRV..VYDTMIEKFAVLY...QQ
NCA1_BOVIN/610-691 P.SAP.KLEGQMGE..DGNSIKVKLIKQDD...GGSPIRHYLVKYR...A
FAS2_SCHAM/642-735 T.SGT.ENEVVVSP..YPNRYELRWQVPAD...NGEPITHYSVKS...CP
TIE2_HUMAN/543-626 L.PPP.RGLNLLPK..SQTTLNLTWQPIFP...SSEDDFYVEVERR...S
TENA_CHICK/682-767 L.PAP.EGLKFKSV..RETSVQVEWDPL......SISFDGWELVFRNMQK
UFO_HUMAN/327-411 L.GPP.ENISATR...NGSQAFVHWQEPRA..PLQGTLLGYRLAY...QG
TIE1_HUMAN/545-632 PLLQP.WLEGWHVE..GTDRLRVSWSLPLV..PGPLVGDGFLLRL...WD
7LES_DROME/1799-1891 P.SPP.RNFSVRVL..SPRELEVSWLPPEQ...LRSESVYYTLHW...QQ
NRG_DROME/717-799 ....P.DNVVGQGT..EPNNLVISWTPMPEI.EHNAPNFHYYVSW...K.
#=GR NRG_DROME/717-799 SS ....C.CCCCCCCC..EEEEEEECSSEEEEE.EECCCCTTSCCCE...E.
#=GR NRG_DROME/717-799 SA ....9.84520430..514324538430203.0544233506152...0.
NRCA_CHICK/726-810 ....P.SNVQGIGS..EPDNLVITWESLKGF.QSNGPGLQYKVSWR..QK
NGCA_CHICK/700-794 PERNP.GGVHGEGN..ETGNLVITWEPLPPQ.AWNAPWARYRVQWR...P
TIE2_HUMAN/639-724 P.PQP.ENIKISNI..THSSAVISWTILD.....GYSISSITIRY...KV
LAR_DROME/515-598 P.SQP.SNFRATDI..GETAVTLQWTKPTH...SSENIVHYELYW...ND
PTP6_DROME/236-321 V.PQV.SIDFAKAV..GANKIYLNWTVND....GNDPIQKFFITL...QE
TIE2_HUMAN/444-529 L.PKPLNAPNVIDT..GHNFAVINISSEPY..FGDGPIKSKKLLY...KP
TIE1_HUMAN/446-533 P.PVPLAAPRLLTK..QSRQLVVSPLVSFS...GDGPISTVRLHYR..PQ
PTPK_MOUSE/290-376 P.PRPIAPPQLLGV..GPTYLLIQLNANSI..IGDGPIILKEVEYR...M
PTPB_HUMAN/1355-1434 P.DKI.QNLHCRPQ..NSTAIACSWIPP......DSDFDGYSIECR...K
PTP1_DROME/583-661 P.NPP.RNMTIETV..RSNSVLVHWSPPE.....SGEFTEYSIRYR...T
PTP1_DROME/312-394 P.LRP.LNVTFDRDFITSNSFRVLWEAPK....GISEFDKYQVSV...AT
PTP1_DROME/217-301 P.NTP.GKFIVWFR..NETTLLVLWQPPY....PAGIYTHYKVSI...EP
PTP1_DROME/123-205 P.DPP.SNLSVQVR..SGKNAIILWSPPT.....QGSYTAFKIKV...LG
PTPB_HUMAN/1261-1344 P.SPP.SLMSFADI..ANTSLAITWKGPP....DWTDYNDFELQW...LP
PTP1_DROME/864-944 P.EPI.TQLHATNI..TDTEISLRWDLP......KGEYNDFDIAY...LT
PTPB_HUMAN/1173-1250 P.ASV.SHLRGSNRN.TTDSLWFNWSPA......SGDFDFYELIL...YN
PTPB_HUMAN/1085-1162 P.AAV.TDLRITEN..STRHLSFRWTAS......EGELSWYNIFL...YN
PTPB_HUMAN/467-543 P.LAV.LQLRVKHA..NETSLSIMWQTP......VAEWEKYIISL...AD
PTPB_HUMAN/995-1074 P.ASV.QGVIADNAY.SSYSLIVSWQKA......AGVAERYDILL...LT
PTPB_HUMAN/731-808 P.DKV.QGVSVSNSA.RSDYLRVSWVHA......TGDFDHYEVTI...KN
PTPB_HUMAN/643-725 P.SSV.SGVTVNNSG.RNDYLSVSWLVA......PGDVDNYEVTL...SH
PTPB_HUMAN/554-632 P.AQV.TDLHVANQG.MTSSLFTNWTQA......QGDVEFYQVLL...IH
PTPB_HUMAN/907-984 P.SAV.KNIHISPNG.ATDSLTVNWTPG......GGDVDSYTVSA...FR
PTPB_HUMAN/112-192 P.PAR.FGVSKEKT..TSTGLHVWWTPS......SGKVTSYEVQL...FD
IL7R_HUMAN/129-221 P.EAP.FDLSVIYRE.GANDFVVTFNTSHLQ.KKYVKVLMHDVAYR..QE
FINC_BOVIN/689-768 P.VVA.TSESVTEI..TASSFVVSWVSA......SDTVSGFRVEY...EL
KALM_CHICK/178-271 P.LKPRKELKFIEL..QSGDLEVKWSSKFN...ISIEPVIYVVQRR..WN
TENA_HUMAN/1529-1608 L.PLL.ENLTISDI..NPYGFTVSWMAS......ENAFDSFLVTV...VD
TENA_CHICK/1227-1306 E.PEV.DNLLVSDA..TPDGFRLSWTAD......DGVFDSFVLKIR..DT
TENA_CHICK/1136-1215 H.PEV.GELTVSDI..TPESFNLSWTTT......NGDFDAFTIEI...ID
TENA_HUMAN/1255-1335 E.VPDMGNLTVTEV..SWDALRLNWTTP......DGTYDQFTIQV...QE
TENA_CHICK/1045-1124 E.PEL.GNLSVSET..GWDGFQLTWTAA......DGAYENFVIQV...QQ
7LES_DROVI/1917-1997 S.YAPLPPLQLIEL..NAYGMTLAWPGT......PDALSSLTLEC...QS
PTPB_HUMAN/22-103 AEPER.CNFTLAESKASSHSVSIQWRIL.......GSPCNFSLIY...SS
KALM_CHICK/544-642 L.AKP.ENLSASFIV.QEGNITGHFSWKISKAVLHQPMTGFQVTW...AE
#=GC SS_cons C.CCC.CEEEEEEC..CTTCCEEEEECCCCE.ECCCCCCCEEEEE...EC
#=GC SA_cons 6.224.55422441..433323223342343.0755433303122...34
#=GC seq_cons P.ssP.pslphpsh..sssslplsWpss......suslssYplph....p
EPA1_HUMAN/333-435 QGTAQDGGPCQPCGVGVHFSPGARALT....TP..AVHVNGLEPYANYTF
EPA2_HUMAN/329-420 E.SGECGP....CEASVRYS...EPPHGL.TRT..SVTVSDLEPHMNYTF
EPA3_CHICK/325-421 CGGSSKICE...PCSDNVRF...LPRQTG.LTNT.TVTVVDLLAHTNYTF
EPB2_CHICK/326-422 CGSGRGACT...RCGDNVQF...APRQLGLTEP..RIYISDLLAHTQYTF
NRCA_CHICK/623-709 GLHEPG........VWHYQT...EVPG....SH..TTVQLKLSPYVNYSF
MYPF_CHICK/630-716 KGSMRW........MKLNFE...VFPD....T...TYESTKMIEGVFYEM
MPSF_CHICK/801-887 VDTED..........WITAN...EKPT....SHR.YFKVTDLHQGHTYVF
MPSF_CHICK/699-785 ANHKN..........WHEVNSSVISRT....I....YTVEDLTEDAFYEF
MPSF_CHICK/499-585 VGSGS..........WQRVNAQVAVKS....P...RYAVFDLAEGKPYVF
MPSF_CHICK/371-457 VGLEN..........WVQCN...DAPV....KIC.KYPVTGLYEGRSYIF
KMLS_CHICK/1318-1403 SVDNK..........WTDLT...TCRS....T...SFNVQDLQADREYKF
AXO1_CHICK/602-692 LLSNKWKQ.....MRTNPVN...IEGN....AE..TAQVVNLIPWMDYEF
MPSF_CHICK/600-684 VGSNQWE.......PANHKP...INYN....R....FVVHGLETGEQYIF
LAR_DROME/322-404 KNANQ..........AFSEI...SGII....TM..YYVVRALSPYTEYEF
MYPF_CHICK/923-1008 TRTME..........WFTVL...EHSR....PT..RCTVSELVMGNEYRF
TIE1_HUMAN/644-729 AGGAGD.........PLWID...VDRP....EET.STIIRGLNASTRYLF
NCA1_BOVIN/509-597 MGEEVW........HSKWYD...AKEA....SMEGIVTIVGLKPETTYAV
EPA4_MOUSE/441-525 KDQN...........ERSYR...IVRT....AAR.NTDIKGLNPLTSYVF
EPB2_CHICK/437-521 KNLSE..........LNSTA...VKSP....TN..TVTVQNLKAGTIYVF
NRCA_CHICK/928-1014 INNTHEL......GPLVEIR...IPAN....ES..SLILKNLNYSTRYKF
LAR_DROME/909-995 IDHGL..........GSERN...MTLR....K....AVFTNLEENTEYIF
ITB4_HUMAN/1641-1728 AQGGGPA.......TAFRVD...GDSP....ES..RLTVPGLSENVPYKF
ITB4_HUMAN/1528-1612 LNGGE..........LHRLN...IPNP....AQT.SVVVEDLLPNHSYVF
ITB4_HUMAN/1220-1310 VNDDNRPI.....GPMKKVL...VDNP....KNR.MLLIENLRESQPYRY
#=GR ITB4_HUMAN/1220-1310 SS CCGGCCEE.....EECSSCE...EECC....CCC.TCCEEEEEEEEECTC
#=GR ITB4_HUMAN/1220-1310 SA 44673454.....4346432...3227....543.223211110011586
PTP9_DROME/171-259 DNQTGVE......IVKNSRN...SVET....LI..HFELQNLRPYTDYRV
LAR_DROME/709-800 LRDEGKGF....LNEPFKFD...VVDT....L...EFNVTGLQPDTKYSI
LAR_DROME/417-503 TNSNQPE......ASWNSQM...VDNS....E...LTTVSDVTPHAIYTV
EPA2_HUMAN/436-519 KGDS............NSYN...VRRT....EGF.SVTLDDLAPDTTYLV
ITB4_HUMAN/1127-1208 QGDSES.........EAHLL...DSKV....P...SVELTNLYPYCDYEM
#=GR ITB4_HUMAN/1127-1208 SS CTTCCG.........GCCEE...EECS....S...CEEECCCCCTCCEEE
#=GR ITB4_HUMAN/1127-1208 SA 376446.........73454...4346....4...323227543223211
CONT_CHICK/799-884 AHDKEA........AAQRVQ...VSNQ....EY..STKLENLKPNTRYHI
AXO1_CHICK/807-896 DGDKEEA.......ADRVRT...AGLV....T...SAHVTGLNPNTKYHV
CAML_HUMAN/812-907 EGSQRKHSK..RHIHKDHVV...VPAN....TT..SVILSGLRPYSSYHL
PTP1_DROME/958-1044 INNLT..........DAGMQ...DFES....EEA.FGVIKNLKPGETYVF
NRG_DROME/917-1007 V.KESYVGE..RREYDPHIT...DPRV....T...RMKMAGLKPNSKYRI
TENA_CHICK/1494-1571 I.DGR..........VKEVI...LDPE....TT..SYTLTELSPSTQYTV
TENA_CHICK/956-1033 P.SGK..........KNEME...IPVD....ST..SFILRGLDAGTEYTI
TENA_CHICK/1406-1483 EDEP...........EVTQM...VSGN....TV..EYDLNGLRPATEYTL
TENA_CHICK/774-853 KDVPGD.........RTTID...LSED....EN..QYSIGNLRPHTEYEV
TENA_CHICK/1317-1395 ITGGT..........PNVVT...VDGS....KT..RTKLVKLVPGVDYNV
FINC_BOVIN/1327-1406 ENMGGR.........PREDR...VPPS....RN..SITLTNLNPGTEYVV
FINC_RAT/1266-1346 AGEGIP.........IFEDF...VDSS....VG..YYTVTGLEPGIDYDI
TENA_CHICK/864-945 ISGGD..........HTELT...VPKGNQ.ATT..RATLTGLRPGTEYGI
FINC_BOVIN/780-858 SVEGS..........STELN...LPET....AN..SVTLSDLQPGVQYNI
FINC_BOVIN/1782-1861 PGSPPR........EVVPRP...RPGV....T...EATITGLEPGTEYTI
FINC_BOVIN/1417-1499 TGGSSP.........VQEFT...VPGS....KS..TATISGLKPGVDYTI
FINC_BOVIN/1601-1680 KEKTGP.........MKEIN...LAPD....SS..SVVVSGLMVATKYEV
FINC_BOVIN/1511-1590 KNGPGP.........SKTKT...VGPD....QT..EMTIEGLQPTVEYVV
FINC_BOVIN/875-955 VNLPGE........HGQRLP...VSRN....T...FAEVTGLSPGVTYHF
TENA_CHICK/593-671 TSSGGL.........DLQFT...VPGN....QT..SATIHELEPGVEYFI
FINC_BOVIN/1693-1771 ANGQT..........PIQRT...IRPD....VR..SYTITGLQPGTDYKI
FINC_BOVIN/1142-1225 TNGQQG........YSLEEV...VHAD....QS..SCTFENLSPGLEYNV
PTP1_DROME/405-485 TFNGD..........TSTLT...TDRT....R....FTLESLLPGRNYSL
FINC_BOVIN/1236-1316 VKNEED.........VAELS...ISPS....DN..AVVLTNLLPGTEYLV
PHB_ALCFA/344-418 .NGS............KVGS...ATAT....A....YTDSGLIAGTTYSY
CHIX_STROI/169-240 .DGV............KVAT...ASGT....S....ATVTGLTPDTAYAF
CHIT_STRLI/142-219 .DGA............KVAT...VTGT....T....YTDNGLTKGTAYSY
GUNB_CELFI/651-733 QGTTQ..........TLVGT...TTAA....A....YILRDLTPGTAYSY
CHI1_BACCI/465-542 .GAN............LATS...VTGT....T....ATISGLTAGTSYTF
APU_THETY/1165-1248 SETGPF.........IKIAT...VSDS....VY..NYVDTDVVNGNVYYY
APU_THETY/928-1009 TVKGG..........LYEKI...ASNV....TQI.TYTDTEVTNGLKYVY
FINC_BOVIN/577-660 KNSPDR.........WKEAT...IPGH....LN..SYTIKGLRPGVVYEG
NRG_DROME/815-905 ENEGEE........GLREIH...VKGD....TH..NALVTQFKPDSKNYA
PTP6_DROME/332-425 SGEVPKVI.....EEAIYQQ...NSRN....L...PYMFDKLKTATDYEF
FAS2_SCHAM/530-616 DSQGW..........EDALN...RTWP....VDS.PYILENLKPQTRYNF
PTPZ_HUMAN/312-401 LDGEDQ........TKHEFL...TDGY....QDL.GAILNNLLPNMSYVL
NCA1_BOVIN/610-691 LSSEW..........KPEIR...LPSG....SD..HVMLKSLDWNAEYEV
FAS2_SCHAM/642-735 VEKYDTEWRL.LPYPCQEHK...LEGQ....AT..TFQLESLQPDTHYKV
TIE2_HUMAN/543-626 VQKSD..........QQNIK...VPGN....LT..SVLLNNLHPREQYVV
TENA_CHICK/682-767 KDDNG..........DITSS...LKRP....ET..SYMQPGLAPGQQYNV
UFO_HUMAN/327-411 QDTPE..........VLMDI...GLRQ....EV..TLELQGDGSVSNLTV
TIE1_HUMAN/545-632 GTRGQ..........ERREN...VSSP....QAR.TALLTGLTPGTHYQL
7LES_DROME/1799-1891 ELDGENVQD..RREWEAHER...RLET....AG..THRLTGIKPGSGYSL
NRG_DROME/717-799 .RDIPAA......AWENNNI...FDWR....QN..NIVIADQPTFVKYLI
#=GR NRG_DROME/717-799 SS .EEEEEE......SSSTTCC...EEEE....EE..EETTCSEEEEECCSS
#=GR NRG_DROME/717-799 SA .001210......5245942...5425....67..044836215060213
NRCA_CHICK/726-810 DVDDE..........WTSVV...VANV....S...KYIVSGTPTFVPYEI
NGCA_CHICK/700-794 LEEPGGGGPS.GGFPWAEST...VDAP....P....VVVGGLPPFSPFQI
TIE2_HUMAN/639-724 QGKNE..........DQHVDV.KIKNA....TII.QYQLKGLEPETAYQV
LAR_DROME/515-598 TYANQ..........AHHKR...ISNS....E...AYTLDGLYPDTLYYI
PTP6_DROME/236-321 AGTPTFT.......YHKDFI...NGSH....T...SYILDHFKPNTTYFL
TIE2_HUMAN/444-529 VNHYEA.........WQHIQ...VTNE....I....VTLNYLEPRTEYEL
TIE1_HUMAN/446-533 DSTMD..........WSTIV...VDPS....E...NVTLMNLRPKTGYSV
PTPK_MOUSE/290-376 T.SGS..........WTETH...AVNA....P...TYKLWHLDPDTEYEI
PTPB_HUMAN/1355-1434 MDTQEV.........EFSRK...LEKE....KS..LLNIMMLVPHKRYLV
PTP1_DROME/583-661 DSEQQ..........WVRLP...SVRS....T...EADITDMTKGEKYTI
PTP1_DROME/312-394 TRRQS..........TVPRS...NEPV....AF..SDFRDIAEPGKTFNV
PTP1_DROME/217-301 PDANDSVL.....YVEKEGE...PPGP....A...QAAFKGLVPGRAYNI
PTP1_DROME/123-205 LSEASSS.......YNRTFQ...VNDN....TF..QHSVKELTPGATYQV
PTPB_HUMAN/1261-1344 RDALTV.........FNPYN...NRKS....E...GRIVYGLRPGRSYQF
PTP1_DROME/864-944 A.DNL..........LAQNM...TTRN....E....ITISDLRPHRNYTF
PTPB_HUMAN/1173-1250 PNGTKK.........ENWKD...KDLT....E....WRFQGLVPGRKYVL
PTPB_HUMAN/1085-1162 PDGNLQ.........ERAQV...DPLV....Q...SFSFQNLLQGRMYKM
PTPB_HUMAN/467-543 R.DLL..........LIHKS...LSKD....AK..EFTFTDLVPGRKYMA
PTPB_HUMAN/995-1074 ENGIL..........LRNTS...EPAT....TK..QHKFEDLTPGKKYKI
PTPB_HUMAN/731-808 KNNF...........IQTKS...IPKS....EN..ECVFVQLVPGRLYSV
PTPB_HUMAN/643-725 DGKV...........VQSLV...IAKS....VR..ECSFSSLTPGRLYTV
PTPB_HUMAN/554-632 ENVV...........IKNES...ISSE....TS..RYSFHSLKSGSLYSV
PTPB_HUMAN/907-984 H.SQK..........VDSQT...IPKH....VF..EHTFHRLEAGEQYQI
PTPB_HUMAN/112-192 ENNQKIQ......GVQIQES...TSWN....E....YTFFNLTAGSKYNI
IL7R_HUMAN/129-221 KDENK..........WTHVN...LSST....KL..TLLQRKLQPAAMYEI
FINC_BOVIN/689-768 SEEGDE.........PQYLD...LPST....AT..SVNIPDLLPGRKYTV
KALM_CHICK/178-271 QGIHPSED.....DATNWQT...VAQT....TDE.RVQLSDIRASRWYQF
TENA_HUMAN/1529-1608 SGKLLD.........PQEFT...LSGT....QR..KLELRGLITGIGYEV
TENA_CHICK/1227-1306 KRKSD..........PLELI...VPGH....ER..THDITGLKEGTEYEI
TENA_CHICK/1136-1215 SNRLLE.........PMEFN...ISGN....SR..TAHISGLSPSTDFIV
TENA_HUMAN/1255-1335 ADQVEE.........AHNLT...VPGS....LR..SMEIPGLRAGTPYTV
TENA_CHICK/1045-1124 SDNPEE.........TWNIT...VPGG....QH..SVNVTGLKANTPYNV
7LES_DROVI/1917-1997 LREQ............LQFN...VAGN....HT..QMRLAPLQPKTRYSC
PTPB_HUMAN/22-103 DTLGAA........LCPTFR...IDNT....TY..GCNLQDLQAGTIYNF
KALM_CHICK/544-642 VTTESRQNSLPNSIISQSQI...LPAD....HY..VLTVPNLRPSMLYRL
#=GC SS_cons CCCCCCEE.....CCCCCCE...EECC....CCC.CECECCEEEEECCCC
#=GC SA_cons 44443434.....5355643...4336....563.233425323131333
#=GC seq_cons tsssp..........hpphs...lsss....p...phslssLpPsspYph
EPA1_HUMAN/333-435 NVE.AQNGVSGLGSSGHAS
EPA2_HUMAN/329-420 TVE.ARNGV........SG
EPA3_CHICK/325-421 EID.AVNGVSD...LSTLS
EPB2_CHICK/326-422 EIQ.AVNGVTD...QSPFS
NRCA_CHICK/623-709 RVI.AVNEIGR....SQPS
MYPF_CHICK/630-716 RVF.AVNAIGV....SQPS
MPSF_CHICK/801-887 KVR.AVNDAGV....GKSS
MPSF_CHICK/699-785 KIA.AANVVGI....GHPS
MPSF_CHICK/499-585 RVL.SANKHGI....SDPS
MPSF_CHICK/371-457 RVR.AVNSAGI....SRPS
KMLS_CHICK/1318-1403 RVR.AANVYGI....SEPS
AXO1_CHICK/602-692 RVL.ASNILGV....GEPS
MPSF_CHICK/600-684 RVK.AVNAVGF....SENS
LAR_DROME/322-404 YVI.AVNNIGR....GPPS
MYPF_CHICK/923-1008 RVY.SENVCGT....SQEP
TIE1_HUMAN/644-729 RMR.ASI.QGL....GDWS
NCA1_BOVIN/509-597 RLA.ALNGKGL....GEIS
EPA4_MOUSE/441-525 HVR.ARTAAGY....GDFS
EPB2_CHICK/437-521 QVR.ARTVAGY....GRYS
NRCA_CHICK/928-1014 YFN.AQTSV......GSGS
LAR_DROME/909-995 RVR.AYTKQGA....GPFS
ITB4_HUMAN/1641-1728 KVQ.ARTTEGF....GPER
ITB4_HUMAN/1528-1612 RVR.AQSQEGW....GRER
ITB4_HUMAN/1220-1310 TVK.ARNGAGW....GPER
#=GR ITB4_HUMAN/1220-1310 SS CCC.CCCCCEE....ECCC
#=GR ITB4_HUMAN/1220-1310 SA 533.4135333....3234
PTP9_DROME/171-259 IVK.AFTTKNE....GEPS
LAR_DROME/709-800 QVA.ALTRKGD....GDRS
LAR_DROME/417-503 RVQ.AYTSMGA....GPMS
EPA2_HUMAN/436-519 QVQ.ALTQEGQ....GAGS
ITB4_HUMAN/1127-1208 KVC.AYGAQGE....GPYS
#=GR ITB4_HUMAN/1127-1208 SS EEE.EEECTCC....CCCC
#=GR ITB4_HUMAN/1127-1208 SA 110.0115865....3341
CONT_CHICK/799-884 DVS.AFNSAGY....GPPS
AXO1_CHICK/807-896 SVR.AYNRAGA....GPPS
CAML_HUMAN/812-907 EVQ.AFNGRGS....GPAS
PTP1_DROME/958-1044 KIQ.AKTAIGF....GPER
NRG_DROME/917-1007 SIT.ATTKMGE....GSEH
TENA_CHICK/1494-1571 KLQ.ALSRS.......MRS
TENA_CHICK/956-1033 SLV.AEKGR.......HKS
TENA_CHICK/1406-1483 RVH.AVKDA.......QKS
TENA_CHICK/774-853 TLI.SRRGD.......MES
TENA_CHICK/1317-1395 NII.SVKGF.......EES
FINC_BOVIN/1327-1406 SIV.ALNSK.......EES
FINC_RAT/1266-1346 SVI.TLING.......GES
TENA_CHICK/864-945 GVT.AVRQD.......RES
FINC_BOVIN/780-858 TIY.AVEEN.......QES
FINC_BOVIN/1782-1861 QVI.ALKNN.......QKS
FINC_BOVIN/1417-1499 TVY.AVTGRGD....SPAS
FINC_BOVIN/1601-1680 SVY.ALKDT.......LTS
FINC_BOVIN/1511-1590 SVY.AQNQN.......GES
FINC_BOVIN/875-955 KVF.AVNQG.......RES
TENA_CHICK/593-671 RVF.AILKN.......KKS
FINC_BOVIN/1693-1771 HLY.TLNDN.......ARS
FINC_BOVIN/1142-1225 SVY.TVKDD.......KES
PTP1_DROME/405-485 SVQ.AVSKK.......MES
FINC_BOVIN/1236-1316 SVS.SVYEQ.......HES
PHB_ALCFA/344-418 TVT.AVDPTAG...ESQPS
CHIX_STROI/169-240 QVA.AVNGA.......GES
CHIT_STRLI/142-219 SVK.ARDTADQ...TGPAS
GUNB_CELFI/651-733 VVK.AKDVAGN...VSAAS
CHI1_BACCI/465-542 TIK.AKDAAGN...LSAAS
APU_THETY/1165-1248 KVV.AVDTSYN....RTAS
APU_THETY/928-1009 AVT.AVDNDGN...ESALS
FINC_BOVIN/577-660 QLI.SVQHY......GQRE
NRG_DROME/815-905 RIL.AYNGRFN....GPPS
PTP6_DROME/332-425 RVR.ACSDLTKT..CGPWS
FAS2_SCHAM/530-616 RFA.AQNEVGF....GPWS
PTPZ_HUMAN/312-401 QIV.AICTNGL...YGKYS
NCA1_BOVIN/610-691 YVV.AENQQ.......GKS
FAS2_SCHAM/642-735 EVR.ATNAIGN....SVPG
TIE2_HUMAN/543-626 RAR..VNTKAQ....GEWS
TENA_CHICK/682-767 SLH.IVKNNTR...GPGLS
UFO_HUMAN/327-411 CVA.AYTAAGD....GPWS
TIE1_HUMAN/545-632 DVQ.LYHCTLL....GPAS
7LES_DROME/1799-1891 WVQ.AHATPTK....SNSS
NRG_DROME/717-799 KVV.AINDR.......GES
#=GR NRG_DROME/717-799 SS EEE.EEEEE.......EEE
#=GR NRG_DROME/717-799 SA 030.10200.......020
NRCA_CHICK/726-810 KVQ.ALNDLGY...APEPS
NGCA_CHICK/700-794 RVQ.AVNGAGK....GPEA
TIE2_HUMAN/639-724 DIF.AENNIGS....SNPA
LAR_DROME/515-598 WLA.ARSQRGE....GATT
PTP6_DROME/236-321 RIV.GKNSIGN....GQPT
TIE2_HUMAN/444-529 CVQ.LVRRGEG....GEGH
TIE1_HUMAN/446-533 RVQLSRPGEGG...EGAWG
PTPK_MOUSE/290-376 RVLLTRPGEGG...TGLPG
PTPB_HUMAN/1355-1434 SIK.VQSAG.......MTS
PTP1_DROME/583-661 QVN.TVSFG.......VES
PTP1_DROME/312-394 IVK.TVSGK.......VTS
PTP1_DROME/217-301 SVQ.TMSED.......EIS
PTP1_DROME/123-205 QAY.TIYDG.......KES
PTPB_HUMAN/1261-1344 NVK.TVSGDSW....KTYS
PTP1_DROME/864-944 TVV.VRSGTESS..VLRSS
PTPB_HUMAN/1173-1250 WVV.THSGD........LS
PTPB_HUMAN/1085-1162 VIV.THSGE........LS
PTPB_HUMAN/467-543 TVT.SISGD........LK
PTPB_HUMAN/995-1074 QIL.TVSGG.......LFS
PTPB_HUMAN/731-808 TVT.TKSGQ........YE
PTPB_HUMAN/643-725 TIT.TRSGKYE...NHSFS
PTPB_HUMAN/554-632 VVT.TVSGG.......ISS
PTPB_HUMAN/907-984 MIA.SVSGS........LK
PTPB_HUMAN/112-192 AIT.AVSGG.......KRS
IL7R_HUMAN/129-221 KVR.SIPDHYFKGFWSEWS
FINC_BOVIN/689-768 NVY.EISEE.......GEQ
KALM_CHICK/178-271 RVA.AVNVHGT...RGFTA
TENA_HUMAN/1529-1608 MVS.GFTQG.......HQT
TENA_CHICK/1227-1306 ELY.GVSSG.......RRS
TENA_CHICK/1136-1215 YLY.GISHG.......FRT
TENA_HUMAN/1255-1335 TLH.GEVRG.......HST
TENA_CHICK/1045-1124 TLY.GVIRG.......YRT
7LES_DROVI/1917-1997 RLA.LAYAATP....GAPI
PTPB_HUMAN/22-103 KII.SLDEE........RT
KALM_CHICK/544-642 EVQ.VLTTGGE....GPAT
#=GC SS_cons EEE.EEECCCC....CCCC
#=GC SA_cons 221.2123454....3232
#=GC seq_cons pVt.Ahsst.......t.S
//
|
