1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 31 32 33 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 61 62 63 64 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 86 87 88 89 90 91 92 93 94 95 96 97 98 99 100 101 102 103 104 105 106 107 108 109 110 111 112 113 114 115 116 117 118 119 120 121 122 123 124 125 126 127 128 129 130 131 132 133 134 135 136 137 138 139 140 141 142 143 144 145 146 147 148 149 150 151 152 153 154 155 156 157 158 159 160 161 162 163 164 165 166 167 168 169 170 171 172 173 174 175 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290 291 292 293 294 295 296 297 298 299 300 301 302 303 304 305 306 307 308 309 310 311 312 313 314 315 316 317 318 319 320 321 322 323 324 325 326
|
#include <iostream>
#include <fstream>
#include <queue>
#include <chrono>
#include "../../hnswlib/hnswlib.h"
#include <unordered_set>
using namespace std;
using namespace hnswlib;
/*
template <typename T>
void writeBinaryPOD(ostream& out, const T& podRef) {
out.write((char*)&podRef, sizeof(T));
}
template <typename T>
static void readBinaryPOD(istream& in, T& podRef) {
in.read((char*)&podRef, sizeof(T));
}*/
class StopW {
std::chrono::steady_clock::time_point time_begin;
public:
StopW() {
time_begin = std::chrono::steady_clock::now();
}
float getElapsedTimeMicro() {
std::chrono::steady_clock::time_point time_end = std::chrono::steady_clock::now();
return (std::chrono::duration_cast<std::chrono::microseconds>(time_end - time_begin).count());
}
void reset() {
time_begin = std::chrono::steady_clock::now();
}
};
void get_gt(
float *mass,
float *massQ,
size_t vecsize,
size_t qsize,
L2Space &l2space,
size_t vecdim,
vector<std::priority_queue<std::pair<float, labeltype>>> &answers,
size_t k) {
BruteforceSearch<float> bs(&l2space, vecsize);
for (int i = 0; i < vecsize; i++) {
bs.addPoint((void *) (mass + vecdim * i), (size_t) i);
}
(vector<std::priority_queue<std::pair<float, labeltype >>>(qsize)).swap(answers);
//answers.swap(vector<std::priority_queue< std::pair< float, labeltype >>>(qsize));
for (int i = 0; i < qsize; i++) {
std::priority_queue<std::pair<float, labeltype >> gt = bs.searchKnn(massQ + vecdim * i, 10);
answers[i] = gt;
}
}
void
get_gt(
unsigned int *massQA,
float *massQ,
float *mass,
size_t vecsize,
size_t qsize,
L2Space &l2space,
size_t vecdim,
vector<std::priority_queue<std::pair<float, labeltype>>> &answers,
size_t k) {
//answers.swap(vector<std::priority_queue< std::pair< float, labeltype >>>(qsize));
(vector<std::priority_queue<std::pair<float, labeltype >>>(qsize)).swap(answers);
DISTFUNC<float> fstdistfunc_ = l2space.get_dist_func();
cout << qsize << "\n";
for (int i = 0; i < qsize; i++) {
for (int j = 0; j < k; j++) {
float other = fstdistfunc_(massQ + i * vecdim, mass + massQA[100 * i + j] * vecdim,
l2space.get_dist_func_param());
answers[i].emplace(other, massQA[100 * i + j]);
}
}
}
float test_approx(
float *massQ,
size_t vecsize,
size_t qsize,
HierarchicalNSW<float> &appr_alg,
size_t vecdim,
vector<std::priority_queue<std::pair<float, labeltype>>> &answers,
size_t k) {
size_t correct = 0;
size_t total = 0;
//#pragma omp parallel for
for (int i = 0; i < qsize; i++) {
std::priority_queue<std::pair<float, labeltype >> result = appr_alg.searchKnn(massQ + vecdim * i, 10);
std::priority_queue<std::pair<float, labeltype >> gt(answers[i]);
unordered_set<labeltype> g;
total += gt.size();
while (gt.size()) {
g.insert(gt.top().second);
gt.pop();
}
while (result.size()) {
if (g.find(result.top().second) != g.end())
correct++;
result.pop();
}
}
return 1.0f * correct / total;
}
void test_vs_recall(
float *massQ,
size_t vecsize,
size_t qsize,
HierarchicalNSW<float> &appr_alg,
size_t vecdim,
vector<std::priority_queue<std::pair<float, labeltype>>> &answers,
size_t k) {
//vector<size_t> efs = { 1,2,3,4,6,8,12,16,24,32,64,128,256,320 };// = ; { 23 };
vector<size_t> efs;
for (int i = 10; i < 30; i++) {
efs.push_back(i);
}
for (int i = 100; i < 2000; i += 100) {
efs.push_back(i);
}
/*for (int i = 300; i <600; i += 20) {
efs.push_back(i);
}*/
for (size_t ef : efs) {
appr_alg.setEf(ef);
StopW stopw = StopW();
float recall = test_approx(massQ, vecsize, qsize, appr_alg, vecdim, answers, k);
float time_us_per_query = stopw.getElapsedTimeMicro() / qsize;
cout << ef << "\t" << recall << "\t" << time_us_per_query << " us\n";
if (recall > 1.0) {
cout << recall << "\t" << time_us_per_query << " us\n";
break;
}
}
}
//void get_knn_quality(unsigned int *massA,size_t vecsize, size_t maxn, HierarchicalNSW<float> &appr_alg) {
// size_t total = 0;
// size_t correct = 0;
// for (int i = 0; i < vecsize; i++) {
// int *data = (int *)(appr_alg.linkList0_ + i * appr_alg.size_links_per_element0_);
// //cout << "numconn:" << *data<<"\n";
// tableint *datal = (tableint *)(data + 1);
// total += maxn;
// for (int j = 0; j < *data; j++) {
// labeltype conn = appr_alg.getExternalLabel(datal[j]);
// for (int k = 1; k <= maxn; k++) {
// if (massA[i * 100 + k] == conn) {
// correct++;
// break;
// }
// }
// }
// if (i % 1000 == 0) {
// cout << i << "\t" << correct << "\t" << total << "\n";
// correct = 0;
// total = 0;
// }
// }
//}
//#include "windows.h"
void sift_test() {
size_t vecsize = 980000;
size_t qsize = 20000;
//size_t qsize = 1000;
//size_t vecdim = 4;
size_t vecdim = 128;
float *mass = new float[vecsize * vecdim];
ifstream input("../../sift100k.bin", ios::binary);
//ifstream input("../../1M_d=4.bin", ios::binary);
input.read((char *) mass, vecsize * vecdim * sizeof(float));
input.close();
float *massQ = new float[qsize * vecdim];
//ifstream inputQ("../siftQ100k.bin", ios::binary);
ifstream inputQ("../../siftQ100k.bin", ios::binary);
//ifstream inputQ("../../1M_d=4q.bin", ios::binary);
inputQ.read((char *) massQ, qsize * vecdim * sizeof(float));
inputQ.close();
unsigned int *massQA = new unsigned int[qsize * 100];
//ifstream inputQA("../knnQA100k.bin", ios::binary);
ifstream inputQA("../../knnQA100k.bin", ios::binary);
//ifstream inputQA("../../1M_d=4qa.bin", ios::binary);
inputQA.read((char *) massQA, qsize * 100 * sizeof(int));
inputQA.close();
int maxn = 16;
/*unsigned int *massA = new unsigned int[vecsize * 100];
ifstream inputA("..\\..\\knngraph100k.bin", ios::binary);
inputA.read((char *)massA, vecsize * 100 * sizeof(int));
inputA.close();*/
L2Space l2space(vecdim);
//BruteforceSearch <float>bs(&l2space, vecsize);
//for(int tr=1;tr<9;tr++)
//#define LOAD_I
#ifdef LOAD_I
HierarchicalNSW<float> appr_alg(&l2space, "hnswlib_sift", false);
//HierarchicalNSW<float> appr_alg(&l2space, "D:/stuff/hnsw_lib/nmslib/similarity_search/release/temp",true);
//HierarchicalNSW<float> appr_alg(&l2space, "/mnt/d/stuff/hnsw_lib/nmslib/similarity_search/release/temp", true);
//appr_alg_saved.saveIndex("d:\\hnsw-index.bin");
//appr_alg_saved.loadIndex("d:\\hnsw-index2.bin", &l2space);
#else
//return;
//for (int u = 0; u < 10; u++) {
/* PROCESS_MEMORY_COUNTERS pmc;
GetProcessMemoryInfo(GetCurrentProcess(), &pmc, sizeof(pmc));
SIZE_T virtualMemUsedByMe = pmc.WorkingSetSize;
cout << virtualMemUsedByMe/1000/1000 << "\n";*/
//HierarchicalNSW<float> appr_alg(&l2space, vecsize, 6, 40);
HierarchicalNSW<float> appr_alg(&l2space, vecsize, 16, 200);
cout << "Building index\n";
StopW stopwb = StopW();
for (int i = 0; i < 1; i++) {
appr_alg.addPoint((void *) (mass + vecdim * i), (size_t) i);
}
#pragma omp parallel for
for (int i = 1; i < vecsize; i++) {
appr_alg.addPoint((void *) (mass + vecdim * i), (size_t) i);
}
/*GetProcessMemoryInfo(GetCurrentProcess(), &pmc, sizeof(pmc));
virtualMemUsedByMe = pmc.WorkingSetSize;
cout << virtualMemUsedByMe / 1000 / 1000 << "\n";*/
cout << "Index built, time=" << stopwb.getElapsedTimeMicro() * 1e-6 << "\n";
//appr_alg.saveIndex("hnswlib_sift");
//appr_alg.saveIndex("d:\\hnsw-index2.bin");
#endif
//get_knn_quality(massA, vecsize, maxn, appr_alg);
//return;
vector<std::priority_queue<std::pair<float, labeltype >>> answers;
size_t k = 10;
cout << "Loading gt\n";
//get_gt(mass, massQ, vecsize, qsize, l2space, vecdim, answers,k);
get_gt(massQA, massQ, mass, vecsize, qsize, l2space, vecdim, answers, k);
cout << "Loaded gt\n";
for (int i = 0; i < 1; i++)
test_vs_recall(massQ, vecsize, qsize, appr_alg, vecdim, answers, k);
//cout << "opt:\n";
//appr_alg.opt = true;
return;
//test_approx(mass, massQ, vecsize, qsize, appr_alg, vecdim, answers);
// //return;
//
// cout << appr_alg.maxlevel_ << "\n";
// //CHECK:
// //for (size_t io = 0; io < vecsize; io++) {
// // if (appr_alg.getExternalLabel(io) != io)
// // throw new exception("bad!");
// //}
// DISTFUNC<float> fstdistfunc_ = l2space.get_dist_func();
////#pragma omp parallel for
// for (int i = 0; i < vecsize; i++) {
// int *data = (int *)(appr_alg.linkList0_ + i * appr_alg.size_links_per_element0_);
// //cout << "numconn:" << *data<<"\n";
// tableint *datal = (tableint *)(data + 1);
//
// std::priority_queue< std::pair< float, tableint >> rez;
// unordered_set <tableint> g;
// for (int j = 0; j < *data; j++) {
// g.insert(datal[j]);
// }
// appr_alg.setEf(400);
// std::priority_queue< std::pair< float, tableint >> closest_elements = appr_alg.searchKnnInternal(appr_alg.getDataByInternalId(i), 17);
// while (closest_elements.size() > 0) {
// if (closest_elements.top().second != i) {
// g.insert(closest_elements.top().second);
// }
// closest_elements.pop();
// }
//
// for (tableint l : g) {
// float other = fstdistfunc_(appr_alg.getDataByInternalId(l), appr_alg.getDataByInternalId(i), l2space.get_dist_func_param());
// rez.emplace(other, l);
// }
// while (rez.size() > 32)
// rez.pop();
// int len = rez.size();
// *data = len;
// // check there are no loop connections created
// for (int j = 0; j < len; j++) {
// datal[j] = rez.top().second;
// if (datal[j] == i)
// throw new exception();
// rez.pop();
// }
//
// }
//
// //get_knn_quality(massA, vecsize, maxn, appr_alg);
// test_vs_recall( massQ, vecsize, qsize, appr_alg, vecdim, answers, k);
// /*test_vs_recall( massQ, vecsize, qsize, appr_alg, vecdim, answers, k);
// test_vs_recall( massQ, vecsize, qsize, appr_alg, vecdim, answers, k);
// test_vs_recall( massQ, vecsize, qsize, appr_alg, vecdim, answers, k);*/
//
//
//
//
//
// /*for(int i=0;i<1000;i++)
// cout << mass[i] << "\n";*/
// //("11", std::ios::binary);
}
|