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Source: htseq
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Diane Trout <diane@ghic.org>,
Andreas Tille <tille@debian.org>
Section: python
Testsuite: autopkgtest-pkg-python
Priority: optional
Build-Depends: debhelper-compat (= 13),
dh-sequence-python3,
python3-debian,
python3-setuptools,
python3-all-dev,
python3-numpy,
python3-matplotlib,
python3-pysam,
swig,
cython3
Standards-Version: 4.7.0
Vcs-Browser: https://salsa.debian.org/med-team/htseq
Vcs-Git: https://salsa.debian.org/med-team/htseq.git
Homepage: https://www-huber.embl.de/users/anders/HTSeq/doc/overview.html
Rules-Requires-Root: no
Package: python3-htseq
Architecture: any
Depends: ${misc:Depends},
${python3:Depends},
${shlibs:Depends}
Provides: python-htseq
Description: Python3 high-throughput genome sequencing read analysis utilities
HTSeq can be used to performing a number of common analysis tasks
when working with high-throughput genome sequencing reads:
.
* Getting statistical summaries about the base-call quality scores to
study the data quality.
* Calculating a coverage vector and exporting it for visualization in
a genome browser.
* Reading in annotation data from a GFF file.
* Assigning aligned reads from an RNA-Seq experiments to exons and
genes.
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