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Source: htsjdk
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Charles Plessy <plessy@debian.org>,
Olivier Sallou <osallou@debian.org>,
Vincent Danjean <vdanjean@debian.org>,
Andreas Tille <tille@debian.org>
Section: science
Priority: optional
Build-Depends: default-jdk (>= 2:1.9),
javahelper,
gradle-debian-helper,
maven-repo-helper,
debhelper (>= 12~),
libcommons-jexl2-java,
libcommons-logging-java,
libjaxb-api-java,
libjaxb-java,
libsnappy-java,
libcommons-compress-java,
libxz-java (>= 1.5),
libngs-java,
# required for correct dependencies for -doc
default-jdk-doc,
# required for tests:
testng (>= 6.9.9),
junit4,
libjimfs-java,
scala-library
Standards-Version: 4.3.0
Vcs-Browser: https://salsa.debian.org/med-team/htsjdk
Vcs-Git: https://salsa.debian.org/med-team/htsjdk.git
Homepage: http://samtools.github.io/htsjdk/
Package: libhtsjdk-java
Architecture: all
Section: java
Depends: ${misc:Depends},
${java:Depends}
Recommends: ${java:Recommends}
Suggests: picard-tools,
python3
Description: Java API for high-throughput sequencing data (HTS) formats
HTSJDK is an implementation of a unified Java library for accessing common
file formats, such as SAM (Sequence Alignment/Map) and VCF, used for
high-throughput sequencing data. There are also an number of useful utilities
for manipulating HTS data.
Package: libhtsjdk-java-doc
Architecture: all
Section: doc
Depends: ${misc:Depends},
${java:Depends}
Recommends: ${java:Recommends}
Description: Documentation for the java HTSJDK library
HTSJDK is an implementation of a unified Java library for accessing common
file formats, such as SAM (Sequence Alignment/Map) and VCF, used for
high-throughput sequencing data. There are also an number of useful utilities
for manipulating HTS data.
.
This package contains the javadoc of the library.
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