File: aspectrin1.nuc

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hyphy 2.5.28%2Bdfsg-3
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#NEXUS

BEGIN TAXA;
	DIMENSIONS NTAX = 4;
	TAXLABELS
		'humnal01' 'chikal01' 'flyal01' 'humeal01' ;
END;

BEGIN CHARACTERS;
	DIMENSIONS NCHAR = 324;
	FORMAT
		DATATYPE = DNA
		GAP=-
		MISSING=?
	;

MATRIX
	'humnal01'  TCCTATCGATTCCAGTTCTTTCAAAGAGATGCTGAAGAGCTGGAGAAATGGATACAGGAAAAACTTCAGATTGCATCTGATGAGAATTAT---AAAGACCCAACCAACTTGCAGGGAAAGCTTCAGAAGCATCAAGCATTTGAAGCTGAAGTGCAGGCCAACTCAGGAGCCATTGTTAAGCTGGATGAAACTGGAAACCTGATGATCTCAGAAGGGCATTTTGCATCTGAAACC------ATACGGACCCGTTTGATGGAGCTGCACCGCCAGTGGGAATTACTTTTGGAGAAGATGCGAGAAAAAGGAATCAAATTGCTGCAG
	'chikal01'  TCCTATCGGTTCCAGTTCTTCCAGCGTGATGCAGATGAGCTGGGAAAATGGATCCAAGAGAAACTCCAGATAGCATCTGATGAAAATTAC---AAAGACCCAAGCAATTTACAGGGGAAGCTGCAGAAGCACCAGGCCTTTGAAGCTGAGGTGCAGGCCAATTCAGGGGCTATCGTTAAGCTGGATGAGACTGGAAATCAGATGATCAATGAAGGCCATTTTGCATCTGAAACC------ATAAGAACTCGTCTACAGGAGCTGCACCGACTATGGGAGTTACTGCTGGAAAAAATGAGAGAGAAGGGAGTGAAGCTGTTGCAA
	'flyal01'   TCGCGCCGCTTCCAGTACTTCAAGCGCGATGCCGACGAGTTGGAGTCGTGGATCCACGAGAAGCTGCAGGCAGCCAGCGAGGAGAGCTAC---CGCGATCCGACCAACCTGCAGGCCAAAATCCAGAAACATCAGGCGTTCGAGGCGGAGGTGTCGGCGCACAGCAACGCCATTGTCTCGCTGGACAACACTGGCCAGGAGATGATCAACCAGCAACATTTTGCCTCCGAGTCG------ATTCAGGTCCGCCTCGACGAGCTGCACAAGCTGTGGGAGCTGCTTCTTAGCCGTCTGGCCGAGAAGGGTCTAAAGCTGCAGCAG
	'humeal01'  TCCTATCACTTACAAGTTTTCAAGCGAGATGCAGATGATCTGGGGAAGTGGATCATGGAGAAAGTCAATATCTTAACCGATAAGAGCTAT---GAAGACCCAACTAATATACAGGGGAAATATCAGAAGCATCAATCCCTTGAAGCAGAGGTGCAAACGAAATCAAGACTCATGTCTGAACTGGAAAAAACAAGGGAAGAACGATTTACCATGGGTCATTCTGCCCACGAAGAA------ACGAAGGCCCATATAGAGGAGCTACGCCACCTGTGGGACCTGCTGTTAGAGCTGACCCTGGAGAAGGGTGACCAGTTGCTGCGG;
END;

BEGIN TREES;
	TREE tree = ((1,2),3,4);
END;