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Source: hyphy
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>,
Étienne Mollier <etienne.mollier@mailoo.org>,
Nilesh Patra <npatra974@gmail.com>
Section: science
Priority: optional
Build-Depends: debhelper-compat (= 13),
cmake,
mpi-default-dev,
libcurl4-gnutls-dev | libcurl4-dev,
libssl-dev,
libsqlite3-dev,
pkg-config,
chrpath
Standards-Version: 4.5.1
Vcs-Browser: https://salsa.debian.org/med-team/hyphy
Vcs-Git: https://salsa.debian.org/med-team/hyphy.git
Homepage: https://hyphy.org/
Rules-Requires-Root: no
Package: hyphy-pt
Architecture: any
Depends: ${shlibs:Depends},
${misc:Depends},
hyphy-common (= ${source:Version})
Description: Hypothesis testing using Phylogenies (pthreads version)
HyPhy is an open-source software package for the analysis of genetic
sequences using techniques in phylogenetics, molecular evolution, and
machine learning. It features a complete graphical user interface (GUI)
and a rich scripting language for limitless customization of analyses.
Additionally, HyPhy features support for parallel computing environments
(via message passing interface) and it can be compiled as a shared
library and called from other programming environments such as Python or
R. Continued development of HyPhy is currently supported in part by an
NIGMS R01 award 1R01GM093939.
.
This package provides an executable using pthreads to do multiprocessing.
Package: hyphy-mpi
Architecture: any
Depends: ${shlibs:Depends},
${misc:Depends},
hyphy-common (= ${source:Version})
Description: Hypothesis testing using Phylogenies (MPI version)
HyPhy is an open-source software package for the analysis of genetic
sequences using techniques in phylogenetics, molecular evolution, and
machine learning. It features a complete graphical user interface (GUI)
and a rich scripting language for limitless customization of analyses.
Additionally, HyPhy features support for parallel computing environments
(via message passing interface) and it can be compiled as a shared
library and called from other programming environments such as Python or
R. Continued development of HyPhy is currently supported in part by an
NIGMS R01 award 1R01GM093939.
.
This package provides an executable using MPI to do multiprocessing.
Package: hyphy-common
Architecture: all
Multi-Arch: foreign
Depends: ${misc:Depends}
Suggests: hyphygui | hyphy-mpi | hyphy-pt
Description: Hypothesis testing using Phylogenies (common files)
HyPhy is an open-source software package for the analysis of genetic
sequences using techniques in phylogenetics, molecular evolution, and
machine learning. It features a complete graphical user interface (GUI)
and a rich scripting language for limitless customization of analyses.
Additionally, HyPhy features support for parallel computing environments
(via message passing interface) and it can be compiled as a shared
library and called from other programming environments such as Python or
R. Continued development of HyPhy is currently supported in part by an
NIGMS R01 award 1R01GM093939.
.
This package provides files that are common to all binary versions.
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