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|
name: Test Coverage
on:
push:
branches: [ master ]
pull_request:
branches: [ master ]
jobs:
coverage:
name: Coveralls Report
runs-on: ubuntu-latest
steps:
- name: Install python
uses: actions/setup-python@v1
with:
python-version: 3.7
- name: Install dependencies
run:
python -m pip install --upgrade pip;
python -m pip install --upgrade wheel;
python -m pip install --upgrade cpp-coveralls;
- name: Get HyPhy code
uses: actions/checkout@v2
- name: Install and activate miniconda
uses: conda-incubator/setup-miniconda@v2
with:
activate-environment: 'hyphy-test-env'
environment-file: '.coveralls.env.yml'
condarc-file: '.coveralls.condarc'
- name: Build HyPhy
run:
cmake .;
make -j HYPHYDEBUG;
ln -s HYPHYDEBUG hyphy;
ln -s HYPHYDEBUG HYPHYMP;
- name: Run unit tests
run:
PATH=.:$PATH ./run_unit_tests.sh || true;
- name: Generate coverage information
run:
coveralls --gcov-options '\-lp';
env:
COVERALLS_REPO_TOKEN: ${{ secrets.coveralls_token }}
|
