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Source: idseq-bench
Section: science
Priority: optional
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Sao I Kuan <saoikuan@gmail.com>
Build-Depends: debhelper-compat (= 13),
dh-python,
insilicoseq,
ncbi-acc-download,
python3-all,
python3-biopython,
python3-setuptools,
python3-smart-open,
python3-yaml,
Standards-Version: 4.6.0
Homepage: https://github.com/chanzuckerberg/idseq-bench
Vcs-Browser: https://salsa.debian.org/med-team/idseq-bench
Vcs-Git: https://salsa.debian.org/med-team/idseq-bench.git
Rules-Requires-Root: no
Testsuite: autopkgtest-pkg-python
Package: idseq-bench
Architecture: all
Depends: ${misc:Depends}, ${python3:Depends}
Recommends: ${python3:Recommends}
Suggests: ${python3:Suggests}
Description: Benchmark generator for the IDseq Portal
IDseq (Infectious Disease Sequencing Platform) is an unbiased global
software platform that helps scientists identify pathogens in
metagenomic sequencing data.
.
* Discover - Identify the pathogen landscape
* Detect - Monitor and review potential outbreaks
* Decipher - Find potential infecting organisms in large datasets
.
This package provides the benchmark generator for the IDseq Portal.
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