File: igraph_scg_grouping.c

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/* -*- mode: C -*-  */
/* 
   IGraph library.
   Copyright (C) 2011-2012  Gabor Csardi <csardi.gabor@gmail.com>
   334 Harvard st, Cambridge, MA, 02138 USA
   
   This program is free software; you can redistribute it and/or modify
   it under the terms of the GNU General Public License as published by
   the Free Software Foundation; either version 2 of the License, or
   (at your option) any later version.
   
   This program is distributed in the hope that it will be useful,
   but WITHOUT ANY WARRANTY; without even the implied warranty of
   MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the
   GNU General Public License for more details.
   
   You should have received a copy of the GNU General Public License
   along with this program; if not, write to the Free Software
   Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 
   02110-1301 USA

*/

#include <igraph.h>

#define SIZE (1000)

int main() {

  igraph_matrix_t M, M2;
  igraph_vector_t lambda;
  igraph_matrix_t V;
  igraph_vector_t groups;
  igraph_vector_t ivec;
  int i, j;
  int n;

  igraph_rng_seed(igraph_rng_default(), 42);

  /* Symmetric matrix, exponentially distributed elements */

  igraph_matrix_init(&M, SIZE, SIZE);
  n=igraph_matrix_nrow(&M);
  for (i=0; i<n; i++) {
    for (j=0; j<n; j++) {
      MATRIX(M, i, j) = igraph_rng_get_exp(igraph_rng_default(), 1);
    }
  }
  igraph_matrix_init(&M2, n, n);
  igraph_matrix_update(&M2, &M);
  igraph_matrix_transpose(&M2);
  igraph_matrix_add(&M, &M2);
  igraph_matrix_scale(&M, 0.5);
  igraph_matrix_destroy(&M2);

  /* Get first (most positive) two eigenvectors */

  igraph_vector_init(&lambda, 0);
  igraph_matrix_init(&V, 0, 0);
  igraph_lapack_dsyevr(&M, IGRAPH_LAPACK_DSYEV_SELECT, /*vl=*/ 0, /*vu=*/ 0, 
		       /*vestimate=*/ 0, /*il=*/ n-1, /*iu=*/ n, 
		       /*abstol=*/ 0.0, /*values=*/ &lambda, /*vectors=*/ &V, 
		       /*support=*/ 0);
  
  /* Grouping */
  
  igraph_vector_init(&groups, 0);
  igraph_vector_init(&ivec, 2);
  VECTOR(ivec)[0] = 2; VECTOR(ivec)[1] = 3;  
  igraph_scg_grouping(&V, &groups, /*invervals=*/ 0, 
		      /*intervals_vector=*/ &ivec, IGRAPH_SCG_SYMMETRIC, 
		      IGRAPH_SCG_OPTIMUM, /*p=*/ 0, /*maxiter=*/ 100);
  
  igraph_vector_print(&groups);

  igraph_vector_destroy(&ivec);
  igraph_vector_destroy(&groups);
  igraph_vector_destroy(&lambda);
  igraph_matrix_destroy(&V);
  igraph_matrix_destroy(&M);

  return 0;
}