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/* -*- mode: C -*- */
/* vim:set ts=2 sw=2 sts=2 et: */
/*
IGraph library.
Copyright (C) 2006-2012 Gabor Csardi <csardi.gabor@gmail.com>
334 Harvard st, Cambridge MA, 02139 USA
This program is free software; you can redistribute it and/or modify
it under the terms of the GNU General Public License as published by
the Free Software Foundation; either version 2 of the License, or
(at your option) any later version.
This program is distributed in the hope that it will be useful,
but WITHOUT ANY WARRANTY; without even the implied warranty of
MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
GNU General Public License for more details.
You should have received a copy of the GNU General Public License
along with this program; if not, write to the Free Software
Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA
02110-1301 USA
*/
#include <igraph.h>
void print_matrix(igraph_matrix_t *m, FILE *f) {
long int i, j;
for (i=0; i<igraph_matrix_nrow(m); i++) {
for (j=0; j<igraph_matrix_ncol(m); j++) {
fprintf(f, " %.2f", MATRIX(*m, i, j));
}
fprintf(f, "\n");
}
fprintf(f, "==========\n");
}
int check_jaccard_all(const igraph_t* g, igraph_matrix_t* m,
igraph_neimode_t mode, igraph_bool_t loops) {
igraph_vector_t pairs, res;
long int i, j, k, n;
igraph_eit_t eit;
igraph_vector_init(&res, 0);
/* First, query the similarities for all the vertices to a matrix */
igraph_similarity_jaccard(g, m, igraph_vss_all(), mode, loops);
/* Second, query the similarities for all pairs using a pair vector */
n = igraph_vcount(g);
igraph_vector_init(&pairs, 0);
for (i = 0; i < n; i++) {
for (j = n-1; j >= 0; j--) {
igraph_vector_push_back(&pairs, i);
igraph_vector_push_back(&pairs, j);
}
}
igraph_similarity_jaccard_pairs(g, &res, &pairs, mode, loops);
for (i = 0, k = 0; i < n; i++) {
for (j = n-1; j >= 0; j--, k++) {
if (fabs(VECTOR(res)[k] - MATRIX(*m, i, j)) > 1e-6) {
fprintf(stderr, "Jaccard similarity calculation for vertex pair %ld-%ld "
"does not match the value in the full matrix (%.6f vs %.6f)\n",
i, j, VECTOR(res)[k], MATRIX(*m, i, j));
return 1;
}
}
}
igraph_vector_destroy(&pairs);
/* Third, query the similarities for all edges */
igraph_similarity_jaccard_es(g, &res, igraph_ess_all(IGRAPH_EDGEORDER_FROM), mode, loops);
igraph_eit_create(g, igraph_ess_all(IGRAPH_EDGEORDER_FROM), &eit);
k = 0;
while (!IGRAPH_EIT_END(eit)) {
long int eid = IGRAPH_EIT_GET(eit);
i = IGRAPH_FROM(g, eid); j = IGRAPH_TO(g, eid);
if (fabs(VECTOR(res)[k] - MATRIX(*m, i, j)) > 1e-6) {
fprintf(stderr, "Jaccard similarity calculation for edge %ld-%ld (ID=%ld) "
"does not match the value in the full matrix (%.6f vs %.6f)\n",
i, j, eid, VECTOR(res)[k], MATRIX(*m, i, j));
return 1;
}
IGRAPH_EIT_NEXT(eit);
k++;
}
igraph_eit_destroy(&eit);
igraph_vector_destroy(&res);
return 0;
}
int check_dice_all(const igraph_t* g, igraph_matrix_t* m,
igraph_neimode_t mode, igraph_bool_t loops) {
igraph_vector_t pairs, res;
long int i, j, k, n;
igraph_eit_t eit;
igraph_vector_init(&res, 0);
/* First, query the similarities for all the vertices to a matrix */
igraph_similarity_dice(g, m, igraph_vss_all(), mode, loops);
/* Second, query the similarities for all pairs using a pair vector */
n = igraph_vcount(g);
igraph_vector_init(&pairs, 0);
for (i = 0; i < n; i++) {
for (j = n-1; j >= 0; j--) {
igraph_vector_push_back(&pairs, i);
igraph_vector_push_back(&pairs, j);
}
}
igraph_similarity_dice_pairs(g, &res, &pairs, mode, loops);
for (i = 0, k = 0; i < n; i++) {
for (j = n-1; j >= 0; j--, k++) {
if (fabs(VECTOR(res)[k] - MATRIX(*m, i, j)) > 1e-6) {
fprintf(stderr, "Dice similarity calculation for vertex pair %ld-%ld "
"does not match the value in the full matrix (%.6f vs %.6f)\n",
i, j, VECTOR(res)[k], MATRIX(*m, i, j));
return 1;
}
}
}
igraph_vector_destroy(&pairs);
/* Third, query the similarities for all edges */
igraph_similarity_dice_es(g, &res, igraph_ess_all(IGRAPH_EDGEORDER_FROM), mode, loops);
igraph_eit_create(g, igraph_ess_all(IGRAPH_EDGEORDER_FROM), &eit);
k = 0;
while (!IGRAPH_EIT_END(eit)) {
long int eid = IGRAPH_EIT_GET(eit);
i = IGRAPH_FROM(g, eid); j = IGRAPH_TO(g, eid);
if (fabs(VECTOR(res)[k] - MATRIX(*m, i, j)) > 1e-6) {
fprintf(stderr, "Dice similarity calculation for edge %ld-%ld (ID=%ld) "
"does not match the value in the full matrix (%.6f vs %.6f)\n",
i, j, eid, VECTOR(res)[k], MATRIX(*m, i, j));
return 1;
}
IGRAPH_EIT_NEXT(eit);
k++;
}
igraph_eit_destroy(&eit);
igraph_vector_destroy(&res);
return 0;
}
int main() {
igraph_t g;
igraph_matrix_t m;
int ret;
igraph_small(&g, 0, IGRAPH_DIRECTED,
0,1, 2,1, 2,0, 3,0,
-1);
igraph_matrix_init(&m, 0, 0);
ret = check_jaccard_all(&g, &m, IGRAPH_ALL, 1);
print_matrix(&m, stdout);
if (ret)
return 1;
igraph_similarity_jaccard(&g, &m, igraph_vss_seq(1, 2), IGRAPH_ALL, 0);
print_matrix(&m, stdout);
ret = check_jaccard_all(&g, &m, IGRAPH_OUT, 1);
print_matrix(&m, stdout);
if (ret)
return 3;
ret = check_jaccard_all(&g, &m, IGRAPH_IN, 0);
print_matrix(&m, stdout);
if (ret)
return 4;
ret = check_dice_all(&g, &m, IGRAPH_ALL, 1);
print_matrix(&m, stdout);
if (ret)
return 5;
ret = check_dice_all(&g, &m, IGRAPH_OUT, 1);
print_matrix(&m, stdout);
if (ret)
return 6;
ret = check_dice_all(&g, &m, IGRAPH_IN, 0);
print_matrix(&m, stdout);
if (ret)
return 7;
igraph_similarity_inverse_log_weighted(&g, &m, igraph_vss_all(), IGRAPH_ALL);
print_matrix(&m, stdout);
igraph_similarity_inverse_log_weighted(&g, &m, igraph_vss_all(), IGRAPH_OUT);
print_matrix(&m, stdout);
igraph_similarity_inverse_log_weighted(&g, &m, igraph_vss_all(), IGRAPH_IN);
print_matrix(&m, stdout);
igraph_matrix_destroy(&m);
igraph_destroy(&g);
return 0;
}
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