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table
interact
"Interaction between two regions"
(
string
chrom
"Chromosome (or contig, scaffold, etc.). For interchromosomal, use 2 records"
uint
chromStart
"Start position of lower region. For interchromosomal, set to chromStart of this region"
uint
chromEnd
"End position of upper region. For interchromosomal, set to chromEnd of this region"
string
name
"Name of item, for display. Usually 'sourceName/targetName' or empty"
uint
score
"Score from 0-1000."
double
value
"Strength of interaction or other data value. Typically basis for score"
string
exp
"Experiment name (metadata for filtering). Use . if not applicable"
string
color
"Item color. Specified as r,g,b or hexadecimal #RRGGBB or html color name, as in //www.w3.org/TR/css3-color/#html4."
string
sourceChrom
"Chromosome of source region (directional) or lower region. For non-directional interchromosomal, chrom of this region."
uint
sourceStart
"Start position source/lower/this region"
uint
sourceEnd
"End position in chromosome of source/lower/this region"
string
sourceName
"Identifier of source/lower/this region"
string
sourceStrand
"Orientation of source/lower/this region: + or -. Use . if not applicable"
string
targetChrom
"Chromosome of target region (directional) or upper region. For non-directional interchromosomal, chrom of other region"
uint
targetStart
"Start position in chromosome of target/upper/this region"
uint
targetEnd
"End position in chromosome of target/upper/this region"
string
targetName
"Identifier of target/upper/this region"
string
targetStrand
"Orientation of target/upper/this region: + or -. Use . if not applicable"
)
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