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<?xml version="1.0"?>
<!--
~ Copyright (c) 2007-2012 The Broad Institute, Inc.
~ SOFTWARE COPYRIGHT NOTICE
~ This software and its documentation are the copyright of the Broad Institute, Inc. All rights are reserved.
~
~ This software is supplied without any warranty or guaranteed support whatsoever. The Broad Institute is not responsible for its use, misuse, or functionality.
~
~ This software is licensed under the terms of the GNU Lesser General Public License (LGPL),
~ Version 2.1 which is available at http://www.opensource.org/licenses/lgpl-2.1.php.
-->
<project name="igvtools" basedir="../." default="deploy">
<property name="scripts.dir" value="${basedir}/scripts"/>
<property name="docs.dir" value="${basedir}/docs"/>
<property name="tmp.dir" value="tmp"/>
<property name="main-class" value="org.broad.igv.tools.IgvTools"/>
<property name="title" value="IGVTools"/>
<property name="jarname" value="igvtools"/>
<property name="deploy.dir" value="igvtools-dist"/>
<property name="genome.dir" value="resources/chromSizes/"/>
<property name="version" value="v0.0"/>
<property name="build-number" value="0.0"/>
<import file="${basedir}/build_macros.xml"/>
<target name="extract-classes">
<unzip dest="${tmp.dir}">
<patternset>
<include name="**/*.class"/>
</patternset>
<fileset dir="lib">
<include name="**/*.jar"/>
</fileset>
</unzip>
</target>
<target name="init">
<path id="library.classpath">
<fileset id="jar.lib" dir="lib"/>
</path>
</target>
<target name="compile" depends="init">
<delete dir="${tmp.dir}"/>
<mkdir dir="${tmp.dir}"/>
<!-- Copy resource files to the tmp directory (.txt files, etc) -->
<copy todir="${tmp.dir}" overwrite="true">
<fileset dir="src">
<exclude name="**/*.form"/>
<exclude name="**/*.java"/>
<exclude name="**/*.svn"/>
<exclude name="**/manifest.mf"/>
</fileset>
</copy>
<javac debug="true" defaultexcludes="false" deprecation="true"
destdir="${tmp.dir}" optimize="false" proceed="false"
srcdir="src">
<classpath refid="library.classpath"/>
</javac>
</target>
<target name="package-jar" depends="compile">
<antcall target="extract-classes"/>
<delete dir="${ant.project.name}-dist"/>
<mkdir dir="${ant.project.name}-dist"/>
<write_version targetFile="${tmp.dir}/resources/about.properties"/>
<jar destfile="${ant.project.name}-dist/${jarname}.jar">
<classfileset dir="${tmp.dir}">
<root classname="${main-class}"/>
<root classname="org.apache.log4j.ConsoleAppender"/>
<rootfileset dir="${tmp.dir}" includes="org/apache/commons/logging/**/*.class"/>
<rootfileset dir="${tmp.dir}" includes="ncsa/hdf/hdf5lib/exceptions/*.class"/>
<rootfileset dir="${tmp.dir}" includes="org/broad/igv/itdf/*.class"/>
</classfileset>
<fileset dir="${tmp.dir}" includes="resources/**, log4j.properties"/>
<fileset dir="." includes="docs/**"/>
<manifest>
<attribute name="Implementation-Title" value="${title}"/>
<attribute name="Main-Class" value="${main-class}"/>
</manifest>
</jar>
</target>
<fileset id="scripts" dir="${scripts.dir}">
<include name="igvtools"/>
<include name="igvtools_gui"/>
<include name="igvtools_gui.command"/>
<include name="igvtools.bat"/>
<include name="igvtools_gui.bat"/>
</fileset>
<target name="create-zip" depends="cleanup, compile, package-jar">
<zip destfile="${deploy.dir}/igvtools_${version}.zip" whenempty="fail" defaultexcludes="true">
<zipfileset dir="${ant.project.name}-dist" includes="${jarname}.jar" prefix="${title}"/>
<zipfileset refid="scripts" prefix="${title}" filemode="755"/>
<zipfileset dir="${docs.dir}" includes="igvtools_readme.txt" prefix="${title}"/>
<zipfileset dir="${genome.dir}" prefix="${title}/genomes"/>
</zip>
</target>
<target name="deploy" depends="create-zip">
<copy todir="${deploy.dir}" overwrite="true">
<fileset dir="${ant.project.name}-dist" includes="*.zip"/>
</copy>
</target>
<target name="cleanup">
<delete quiet="true">
<fileset dir="${tmp.dir}"/>
<fileset dir="${ant.project.name}-dist"/>
</delete>
</target>
</project>
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