File: cat_plugin.xml

package info (click to toggle)
igv 2.3.38%2Bdfsg-1
  • links: PTS, VCS
  • area: non-free
  • in suites: jessie, jessie-kfreebsd
  • size: 194,072 kB
  • ctags: 20,659
  • sloc: java: 131,543; xml: 18,718; php: 152; sh: 17; makefile: 11
file content (28 lines) | stat: -rw-r--r-- 1,338 bytes parent folder | download
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
<!--
  ~ Copyright (c) 2007-2012 The Broad Institute, Inc.
  ~ SOFTWARE COPYRIGHT NOTICE
  ~ This software and its documentation are the copyright of the Broad Institute, Inc. All rights are reserved.
  ~
  ~ This software is supplied without any warranty or guaranteed support whatsoever. The Broad Institute is not responsible for its use, misuse, or functionality.
  ~
  ~ This software is licensed under the terms of the GNU Lesser General Public License (LGPL),
  ~ Version 2.1 which is available at http://www.opensource.org/licenses/lgpl-2.1.php.
  -->
<!DOCTYPE cli_plugin SYSTEM "../../../src/org/broad/igv/cli_plugin/resources/cli_plugin.dtd">
<cli_plugin api_version="alpha" plugin_version="1.0" name="cat"
            id="org.broadinstitute.igv.plugin.cat">
    <tool name="cat" defaultPath="cat">
        <default_arg>
            <arg name="Arguments" cmd_arg="" type="TEXT"/>
            <arg name="Track A" cmd_arg="" type="FEATURE_TRACK"/>
            <arg name="Track B" cmd_arg="" type="FEATURE_TRACK"
                 encodingCodec="org.broad.igv.feature.tribble.IGVBEDCodec"/>
        </default_arg>
        <default_output>
            <output>
                <parser format="bed" strict="true"/>
            </output>
        </default_output>
        <command name="Concatenate" cmd=""/>
    </tool>
</cli_plugin>