File: igvtools

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igv 2.6.3%2Bdfsg-3
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#!/bin/sh
prefix=`dirname $(readlink $0 || echo $0)`

# Check whether or not to use the bundled JDK
if [ -d "${prefix}/jdk-11" ]; then
    echo echo "Using bundled JDK."
    JAVA_HOME="${prefix}/jdk-11"
    PATH=$JAVA_HOME/bin:$PATH
else
    echo "Using system JDK."
fi

java -showversion -Djava.awt.headless=true --module-path="${prefix}/lib" -Xmx1500m \
    @${prefix}/igv.args \
    --module=org.igv/org.broad.igv.tools.IgvTools  "$@"